View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11039_low_4 (Length: 680)

Name: NF11039_low_4
Description: NF11039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11039_low_4
NF11039_low_4
[»] chr8 (35 HSPs)
chr8 (20-558)||(38593839-38594368)
chr8 (554-673)||(16383372-16383491)
chr8 (557-673)||(34307214-34307330)
chr8 (557-673)||(24307779-24307895)
chr8 (554-673)||(16056387-16056506)
chr8 (554-673)||(30479460-30479579)
chr8 (558-673)||(32032724-32032838)
chr8 (554-640)||(24307624-24307710)
chr8 (554-663)||(504117-504226)
chr8 (557-663)||(14547920-14548026)
chr8 (559-663)||(12831047-12831151)
chr8 (559-663)||(15048178-15048281)
chr8 (559-663)||(15197333-15197437)
chr8 (559-663)||(23122593-23122697)
chr8 (559-663)||(40423939-40424043)
chr8 (558-673)||(17443824-17443939)
chr8 (554-663)||(43414577-43414686)
chr8 (559-663)||(1179936-1180040)
chr8 (556-664)||(10284626-10284734)
chr8 (557-663)||(4854859-4854965)
chr8 (561-663)||(10621083-10621185)
chr8 (559-663)||(34012292-34012396)
chr8 (554-673)||(5957825-5957944)
chr8 (558-673)||(37038478-37038593)
chr8 (578-673)||(8841418-8841513)
chr8 (554-673)||(38229424-38229542)
chr8 (603-673)||(32707989-32708061)
chr8 (558-663)||(44507083-44507188)
chr8 (557-673)||(15258915-15259031)
chr8 (557-664)||(42221513-42221620)
chr8 (559-673)||(20074928-20075034)
chr8 (603-663)||(9122229-9122289)
chr8 (559-627)||(14055624-14055692)
chr8 (564-597)||(9122200-9122233)
chr8 (558-614)||(25838196-25838252)
[»] chr1 (36 HSPs)
chr1 (554-673)||(5958986-5959105)
chr1 (559-673)||(50590986-50591100)
chr1 (559-673)||(41608479-41608593)
chr1 (559-673)||(47748443-47748556)
chr1 (556-663)||(32813244-32813351)
chr1 (554-663)||(38595149-38595258)
chr1 (559-663)||(3000319-3000423)
chr1 (556-659)||(2581912-2582015)
chr1 (559-663)||(9474872-9474976)
chr1 (559-663)||(27564731-27564835)
chr1 (555-673)||(44332357-44332468)
chr1 (549-663)||(8346384-8346498)
chr1 (557-663)||(38632317-38632423)
chr1 (557-673)||(45044546-45044662)
chr1 (559-663)||(48716278-48716382)
chr1 (558-673)||(37926424-37926539)
chr1 (557-663)||(49811523-49811629)
chr1 (559-663)||(47452316-47452420)
chr1 (564-663)||(44548372-44548471)
chr1 (558-673)||(51898669-51898784)
chr1 (558-663)||(41758804-41758909)
chr1 (558-663)||(50630457-50630562)
chr1 (560-664)||(44453980-44454084)
chr1 (559-663)||(26440734-26440838)
chr1 (559-663)||(43132-43236)
chr1 (559-663)||(37649198-37649302)
chr1 (559-673)||(6260870-6260984)
chr1 (579-673)||(11152364-11152458)
chr1 (564-663)||(26274437-26274536)
chr1 (559-664)||(3302528-3302633)
chr1 (556-629)||(23597121-23597194)
chr1 (563-631)||(34340067-34340134)
chr1 (558-673)||(7740732-7740847)
chr1 (589-663)||(13414791-13414865)
chr1 (556-629)||(44112800-44112872)
chr1 (602-659)||(48489343-48489400)
[»] chr6 (21 HSPs)
chr6 (556-673)||(30341346-30341463)
chr6 (557-673)||(15990028-15990144)
chr6 (559-673)||(15508010-15508124)
chr6 (559-673)||(4231548-4231662)
chr6 (554-663)||(17598549-17598658)
chr6 (558-663)||(31976247-31976352)
chr6 (566-663)||(32869685-32869782)
chr6 (564-663)||(22880654-22880753)
chr6 (564-673)||(28536474-28536581)
chr6 (559-673)||(31953016-31953130)
chr6 (556-663)||(6209461-6209568)
chr6 (555-663)||(31110757-31110863)
chr6 (558-663)||(11427615-11427722)
chr6 (575-663)||(31109396-31109484)
chr6 (559-673)||(29857827-29857941)
chr6 (554-673)||(12732477-12732596)
chr6 (555-673)||(15832573-15832691)
chr6 (563-673)||(9379698-9379808)
chr6 (603-673)||(30870058-30870128)
chr6 (555-663)||(23128123-23128231)
chr6 (558-625)||(22422052-22422119)
[»] chr5 (29 HSPs)
chr5 (556-673)||(3921251-3921368)
chr5 (558-673)||(2252154-2252269)
chr5 (557-669)||(39688887-39688999)
chr5 (559-663)||(28177775-28177879)
chr5 (558-663)||(6679697-6679802)
chr5 (554-663)||(18520880-18520989)
chr5 (555-662)||(13811648-13811755)
chr5 (559-673)||(26720516-26720630)
chr5 (559-673)||(26990265-26990379)
chr5 (557-663)||(36732938-36733044)
chr5 (558-663)||(2740273-2740378)
chr5 (559-663)||(35785199-35785303)
chr5 (559-663)||(40145407-40145511)
chr5 (559-663)||(42414298-42414402)
chr5 (557-663)||(15409606-15409712)
chr5 (559-673)||(35943878-35943992)
chr5 (552-673)||(14831807-14831928)
chr5 (559-663)||(33149634-33149738)
chr5 (555-673)||(31008984-31009102)
chr5 (554-618)||(36875644-36875708)
chr5 (557-664)||(9603811-9603918)
chr5 (564-673)||(16327906-16328015)
chr5 (563-622)||(10356638-10356698)
chr5 (559-673)||(6259987-6260101)
chr5 (559-673)||(33825310-33825424)
chr5 (603-664)||(21370048-21370109)
chr5 (582-663)||(39557513-39557594)
chr5 (556-624)||(38296200-38296268)
chr5 (585-629)||(32473328-32473371)
[»] chr4 (38 HSPs)
chr4 (555-673)||(19670702-19670820)
chr4 (557-673)||(55475189-55475305)
chr4 (557-672)||(32766956-32767071)
chr4 (558-673)||(47986207-47986322)
chr4 (558-673)||(50813878-50813993)
chr4 (559-673)||(55079699-55079814)
chr4 (577-673)||(17983729-17983825)
chr4 (557-673)||(29547945-29548061)
chr4 (559-673)||(8343149-8343263)
chr4 (558-673)||(44536732-44536846)
chr4 (559-673)||(18924481-18924595)
chr4 (567-673)||(29589726-29589831)
chr4 (554-673)||(50052414-50052533)
chr4 (559-663)||(6034044-6034148)
chr4 (559-663)||(41236347-41236451)
chr4 (559-673)||(11511448-11511562)
chr4 (557-663)||(48183045-48183151)
chr4 (554-663)||(480443-480552)
chr4 (557-673)||(29977883-29977999)
chr4 (556-673)||(29239883-29240000)
chr4 (554-663)||(42044363-42044472)
chr4 (559-663)||(31910192-31910296)
chr4 (559-663)||(54473529-54473633)
chr4 (559-664)||(3481654-3481759)
chr4 (558-663)||(29234241-29234346)
chr4 (559-663)||(40574779-40574883)
chr4 (557-673)||(48647712-48647828)
chr4 (558-673)||(28480254-28480369)
chr4 (558-673)||(28481129-28481244)
chr4 (558-673)||(28482004-28482119)
chr4 (559-673)||(50526157-50526271)
chr4 (557-663)||(23608233-23608339)
chr4 (557-663)||(24995103-24995209)
chr4 (603-663)||(41823926-41823986)
chr4 (600-673)||(56300151-56300224)
chr4 (563-664)||(18769113-18769214)
chr4 (563-663)||(53352562-53352661)
chr4 (601-673)||(47104586-47104658)
[»] chr7 (37 HSPs)
chr7 (558-673)||(22343360-22343475)
chr7 (558-673)||(41915740-41915855)
chr7 (557-673)||(38044195-38044311)
chr7 (551-673)||(7727898-7728020)
chr7 (554-673)||(8238207-8238327)
chr7 (559-673)||(32564412-32564526)
chr7 (559-673)||(40846099-40846213)
chr7 (560-663)||(35522877-35522980)
chr7 (557-663)||(7389387-7389493)
chr7 (559-663)||(19329842-19329946)
chr7 (557-673)||(36208171-36208287)
chr7 (564-663)||(3784000-3784099)
chr7 (557-663)||(8080379-8080485)
chr7 (555-673)||(18207176-18207293)
chr7 (558-663)||(36361909-36362014)
chr7 (559-663)||(4999510-4999614)
chr7 (557-673)||(19436173-19436289)
chr7 (559-663)||(38267040-38267144)
chr7 (555-663)||(38837213-38837321)
chr7 (564-663)||(3694372-3694471)
chr7 (559-649)||(46374812-46374902)
chr7 (558-663)||(3434561-3434666)
chr7 (554-663)||(35137528-35137637)
chr7 (558-663)||(36362025-36362130)
chr7 (559-673)||(39255910-39256023)
chr7 (556-624)||(10343598-10343666)
chr7 (559-662)||(21234401-21234504)
chr7 (556-663)||(40957704-40957811)
chr7 (554-664)||(35468850-35468960)
chr7 (558-663)||(26296643-26296748)
chr7 (564-664)||(2318238-2318338)
chr7 (558-663)||(46033797-46033902)
chr7 (559-629)||(41423682-41423752)
chr7 (564-663)||(32951489-32951588)
chr7 (559-663)||(31735884-31735981)
chr7 (556-664)||(11044185-11044283)
chr7 (565-629)||(43317566-43317629)
[»] chr2 (35 HSPs)
chr2 (554-673)||(45097721-45097840)
chr2 (559-673)||(43490121-43490235)
chr2 (559-673)||(38732354-38732468)
chr2 (554-673)||(13365346-13365467)
chr2 (577-673)||(2997473-2997569)
chr2 (559-663)||(40613898-40614002)
chr2 (557-663)||(9058478-9058584)
chr2 (557-663)||(10249378-10249484)
chr2 (556-673)||(26891490-26891607)
chr2 (555-664)||(33436095-33436204)
chr2 (559-663)||(28381651-28381755)
chr2 (555-663)||(42257189-42257297)
chr2 (564-663)||(28863460-28863559)
chr2 (558-659)||(32505648-32505749)
chr2 (559-663)||(40701478-40701582)
chr2 (564-663)||(19930816-19930915)
chr2 (558-663)||(7465731-7465836)
chr2 (609-673)||(3034969-3035033)
chr2 (559-663)||(13438343-13438447)
chr2 (559-663)||(17473020-17473124)
chr2 (555-663)||(38273138-38273246)
chr2 (552-663)||(30915456-30915567)
chr2 (558-663)||(5574484-5574589)
chr2 (559-673)||(17819990-17820104)
chr2 (555-673)||(20700811-20700929)
chr2 (559-665)||(27864704-27864810)
chr2 (558-664)||(33436210-33436316)
chr2 (558-663)||(2533123-2533227)
chr2 (559-624)||(4060685-4060750)
chr2 (558-663)||(36168835-36168940)
chr2 (565-673)||(3439985-3440093)
chr2 (557-629)||(15428770-15428842)
chr2 (602-673)||(3737986-3738057)
chr2 (564-673)||(41575142-41575252)
chr2 (556-624)||(38882849-38882916)
[»] chr3 (40 HSPs)
chr3 (559-673)||(45058539-45058652)
chr3 (581-673)||(36331315-36331407)
chr3 (562-673)||(42823114-42823225)
chr3 (559-663)||(26141528-26141632)
chr3 (559-663)||(53982011-53982115)
chr3 (562-673)||(26754698-26754809)
chr3 (559-673)||(8076393-8076507)
chr3 (557-663)||(11907369-11907475)
chr3 (559-673)||(14623825-14623939)
chr3 (549-663)||(31456679-31456793)
chr3 (557-663)||(41189760-41189866)
chr3 (557-663)||(54868891-54868997)
chr3 (557-662)||(27714888-27714993)
chr3 (559-663)||(33644200-33644304)
chr3 (559-663)||(47531865-47531969)
chr3 (555-663)||(49607410-49607518)
chr3 (563-663)||(52629304-52629404)
chr3 (564-673)||(13898041-13898150)
chr3 (558-663)||(17470404-17470509)
chr3 (555-663)||(11347918-11348026)
chr3 (559-663)||(20764911-20765015)
chr3 (564-664)||(30801728-30801828)
chr3 (559-663)||(51419356-51419460)
chr3 (557-624)||(11095388-11095455)
chr3 (564-663)||(48587087-48587186)
chr3 (558-673)||(24699940-24700055)
chr3 (558-673)||(25395319-25395434)
chr3 (557-624)||(33118886-33118953)
chr3 (558-673)||(35536625-35536740)
chr3 (558-629)||(36331408-36331479)
chr3 (558-673)||(48375692-48375807)
chr3 (556-624)||(36707459-36707527)
chr3 (558-673)||(8956761-8956876)
chr3 (564-673)||(25407133-25407243)
chr3 (557-662)||(35093583-35093688)
chr3 (559-673)||(41080709-41080821)
chr3 (557-625)||(1758490-1758560)
chr3 (556-629)||(4190170-4190242)
chr3 (557-630)||(35965803-35965876)
chr3 (585-629)||(9434247-9434290)
[»] scaffold0018 (1 HSPs)
scaffold0018 (572-673)||(152511-152612)
[»] scaffold0321 (1 HSPs)
scaffold0321 (554-663)||(10105-10214)
[»] scaffold0316 (1 HSPs)
scaffold0316 (602-675)||(17097-17170)
[»] scaffold0237 (1 HSPs)
scaffold0237 (559-673)||(4029-4143)
[»] scaffold1268 (1 HSPs)
scaffold1268 (559-673)||(915-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (559-673)||(915-1029)
[»] scaffold0110 (1 HSPs)
scaffold0110 (559-664)||(8858-8963)


Alignment Details
Target: chr8 (Bit Score: 453; Significance: 0; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 453; E-Value: 0
Query Start/End: Original strand, 20 - 558
Target Start/End: Complemental strand, 38594368 - 38593839
Alignment:
Q  20 tcgtcaacattaaacgagtaaacggtagaaaagtaacacaaaaaatcaaccaaatttcacatgttaattgccacaacataaacatggagtcccgtggata 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38594368 tcgtcaacattaaacgagtaaacggtagaaaagtaacacaaaaaatcaaccaaatttcacatgctaattgccacaacataaacatggagtcccgtggata 38594269  T
Q  120 aagttgtattatgatatgtaaagattattcattattatttttgtacaaaaagattattcaatatgatattttttaaatcaaaataattcaaaatgattga 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  38594268 aagttgtattatgatatgtaaagattattcattattatttttgtacaaaaagattattcaatatgatattttttaaatcaa--taattcaaaatgattga 38594171  T
Q  220 acatatatagtagaaactagtagctatttataagagcagtatctatagaattgttaattaatctttttcttaaccaataatctttactgtatattagctt 319  Q
    |||||||| ||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38594170 acatatattgtagaaacta-------tttataagagcagtatctatagagttgttaattaatctttttcttaaccaataatctttactgtatattagctt 38594078  T
Q  320 tttgatatttcatgttcatatacatacttcataaaatctccacctttttaataaaaggaaacatcaacgaaaaaagttcacaatttttagagagatgcta 419  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  38594077 tttgatatttcatgttcatatacatacttcataaaatctccacctttttaataaaagggaacatcaacgaaaaaagttcacaatttttagagagatgcta 38593978  T
Q  420 aatacgatggaaacatcaacgaaaaccaagaatgtccagtagccatctccacctttttacnnnnnnncatgggagtaagtgtcgttgaaaagatcattta 519  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       |||||||||||||||||||||||||||||| ||    
T  38593977 aatacgatggaaacatcaacgaaaaccaagaatgtccagtagctatctccacctttttacaaaaaaacatgggagtaagtgtcgttgaaaagatcatcta 38593878  T
Q  520 tgaagccacatagtatttctagtttaccaaaaacaaaaa 558  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  38593877 tgaagccaaatagtatttctagtttaccaaaaacaaaaa 38593839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 554 - 673
Target Start/End: Original strand, 16383372 - 16383491
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16383372 aaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16383471  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||||||||||||    
T  16383472 ctttctctttcttcttctct 16383491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 557 - 673
Target Start/End: Original strand, 34307214 - 34307330
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  657 tctctttcttcttctct 673  Q
    |||||||||||||||||    
T  34307314 tctctttcttcttctct 34307330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 24307895 - 24307779
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  657 tctctttcttcttctct 673  Q
    |||||||||||||||||    
T  24307795 tctctttcttcttctct 24307779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 554 - 673
Target Start/End: Complemental strand, 16056506 - 16056387
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||||||||||||||||||||||| ||||| ||| ||||||| |  |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16056506 aaaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16056407  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||||||||||||    
T  16056406 ctttctctttcttcttctct 16056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 554 - 673
Target Start/End: Complemental strand, 30479579 - 30479460
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||||||||||  ||||||||| ||||||||||||    
T  30479579 aaaaggagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtaca 30479480  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||||||||||||    
T  30479479 ctttctctttcttcttctct 30479460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 32032724 - 32032838
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  658 ctctttcttcttctct 673  Q
    |||||||| |||||||    
T  32032823 ctctttctccttctct 32032838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 554 - 640
Target Start/End: Original strand, 24307624 - 24307710
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggacc 640  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||| ||||||||||    
T  24307624 aaaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtggccatatggacc 24307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 554 - 663
Target Start/End: Complemental strand, 504226 - 504117
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||| |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||    
T  504226 aaaatgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T
Q  654 ctttctcttt 663  Q
    | ||||||||    
T  504126 cattctcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 14547920 - 14548026
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| | |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  657 tctcttt 663  Q
    |||||||    
T  14548020 tctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  659 tcttt 663  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 15048281 - 15048178
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  |||||||| |||||||||||||||| || | || |||||||||||||||| ||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  659 tcttt 663  Q
    |||||    
T  15048182 tcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 15197333 - 15197437
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||| ||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  659 tcttt 663  Q
    |||||    
T  15197433 tcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 23122697 - 23122593
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||| || | ||  ||||||||||| ||| ||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  659 tcttt 663  Q
    |||||    
T  23122597 tcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 40424043 - 40423939
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| | |||||||||||||||||||||  |||||| |||||||||||||||||| || | ||| ||||||||||||||| ||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  659 tcttt 663  Q
    |||||    
T  40423943 tcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 17443824 - 17443939
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| ||| ||||||||| |||||||| | || |||| |||||||||||||||||||| | ||| |||||||| |||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  658 ctctttcttcttctct 673  Q
    ||||||| ||||||||    
T  17443924 ctctttcatcttctct 17443939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 554 - 663
Target Start/End: Complemental strand, 43414686 - 43414577
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||| ||||||||||||||| ||| |||||| |||||| |||||  ||||||||||||||||||||| ||| |||| || ||||| |||||||||| |||    
T  43414686 aaaatgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  43414586 ctttctcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||| || | ||| ||||  ||||||||| ||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  659 tcttt 663  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 556 - 664
Target Start/End: Complemental strand, 10284734 - 10284626
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    |||||||||||||||||| ||||||||| ||| ||||||||   ||||||||||||||||||| ||||| || | ||  ||||||||||||||| |||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  656 ttctctttc 664  Q
    |||||||||    
T  10284634 ttctctttc 10284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 4854965 - 4854859
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||| |||||||||||||||||||  || ||||| ||| |||||||||| |||||| || |||||||| ||||||| ||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  657 tctcttt 663  Q
    |||||||    
T  4854865 tctcttt 4854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 561 - 663
Target Start/End: Complemental strand, 10621185 - 10621083
Alignment:
Q  561 gttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctc 660  Q
    ||||||||||||| ||| |||||||||| ||||||||  ||||||||||||||||||||||||| || | || || || |||||||||| ||||||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  661 ttt 663  Q
    |||    
T  10621085 ttt 10621083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 34012396 - 34012292
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||| ||||||||  ||||||||||||||||||| ||||| || | ||  |||| |||||||||| ||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  659 tcttt 663  Q
    |||||    
T  34012296 tcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 554 - 673
Target Start/End: Original strand, 5957825 - 5957944
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||| ||| |||||||||| |||  ||||||||||||||||||  ||||||||||||||||||||||||| || | ||  |||| |||||||||  |||    
T  5957825 aaaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||| ||| ||||    
T  5957925 ctttctctttcctctcctct 5957944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 37038478 - 37038593
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| | |||||||||||||||||  ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  658 ctctttcttcttctct 673  Q
    || |||| ||| ||||    
T  37038578 ctatttcctctcctct 37038593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 578 - 673
Target Start/End: Complemental strand, 8841513 - 8841418
Alignment:
Q  578 cccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    ||||||||||||| ||||||  ||||||||||||||||||||| ||| || | ||  ||||||||||||||| |||||||||||||| ||| ||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctct 8841418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 554 - 673
Target Start/End: Original strand, 38229424 - 38229542
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||| |||||||||||||| ||||| |||||||||||||||  ||  ||||||||||||||||||||||||||||| ||  ||||  | | ||||| |||    
T  38229424 aaaatgagttatgatacatgaacactcttaggtggcaatac-gctcctgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcaca 38229522  T
Q  654 ctttctctttcttcttctct 673  Q
     |||||||||| ||||||||    
T  38229523 ttttctctttcctcttctct 38229542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 603 - 673
Target Start/End: Complemental strand, 32708061 - 32707989
Alignment:
Q  603 acacccacacaaaaatctgacatgtggacatatggaccccgcacaagt--acactttctctttcttcttctct 673  Q
    ||||||| |||||||||||| ||||||  |||||||||||||||||||  |||||||||||||||||||||||    
T  32708061 acacccatacaaaaatctgagatgtggctatatggaccccgcacaagtacacactttctctttcttcttctct 32707989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 44507188 - 44507083
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| |||||||||||||| |||||||   || |||||||||||||||||||||| || | ||  ||||||||| ||||| | |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  658 ctcttt 663  Q
    ||||||    
T  44507088 ctcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 15259031 - 15258915
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||| | || ||||| |||||||||| |  | |||| ||||| ||||||||||||||||| ||  ||||||| ||||||| ||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  657 tctctttcttcttctct 673  Q
    |||||||| ||| ||||    
T  15258931 tctctttcctctcctct 15258915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 664
Target Start/End: Original strand, 42221513 - 42221620
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||| ||||||||| |||||||    | ||||||||||||||||||||||| ||   ||||||||||||  ||||| ||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  657 tctctttc 664  Q
    ||||||||    
T  42221613 tctctttc 42221620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 20075034 - 20074928
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| ||||||||||||||||||   |||||||||||| |||||| ||||| |        ||||||| ||||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacg--------tggaccctgcacaagcacactttc 20074943  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||||||||    
T  20074942 tctttcctcttctct 20074928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 663
Target Start/End: Original strand, 9122229 - 9122289
Alignment:
Q  603 acacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    ||||||||||||||||||||||||| | ||  |||| |||||||||| |||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 627
Target Start/End: Complemental strand, 14055692 - 14055624
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgt 627  Q
    ||||||||||||||  ||||||||||||| ||||||||   |||||| |||||||||||||| ||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgt 14055624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 564 - 597
Target Start/End: Original strand, 9122200 - 9122233
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacc 597  Q
    |||||||||| |||||||||||||||||||||||    
T  9122200 atgatacatagacacccttaggtggcaatacacc 9122233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 558 - 614
Target Start/End: Original strand, 25838196 - 25838252
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaa 614  Q
    |||||||||||| ||| | | |||||||||||||||||| | |||||| ||||||||    
T  25838196 agagttatgataaatagatatccttaggtggcaatacactttttgacatccacacaa 25838252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 7e-54; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 554 - 673
Target Start/End: Complemental strand, 5959105 - 5958986
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5959105 aaaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtaca 5959006  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||||||||||||    
T  5959005 ctttctctttcttcttctct 5958986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 50591100 - 50590986
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  50591000 tctttcttcttctct 50590986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 41608593 - 41608479
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  41608493 tctttcttcttctct 41608479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 47748443 - 47748556
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||||| |||||||||||||||||||||  |||||||||| | ||||||||||||||||| |||||||| |||||||||||| ||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttc 47748541  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  47748542 tctttcttcttctct 47748556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 556 - 663
Target Start/End: Original strand, 32813244 - 32813351
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    |||||||||||||||||| ||| |||||||||||||||||||  || |||||||||||||||||||||| |||| || |||||||||||||||| |||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  656 ttctcttt 663  Q
    ||||||||    
T  32813344 ttctcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 554 - 663
Target Start/End: Original strand, 38595149 - 38595258
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||| ||||| |||    
T  38595149 aaaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  38595249 ctttctcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||| ||||| ||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  659 tcttt 663  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 556 - 659
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  656 ttct 659  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 9474976 - 9474872
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||  ||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  659 tcttt 663  Q
    |||||    
T  9474876 tcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 27564835 - 27564731
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||   ||  ||||||||||||||| ||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  659 tcttt 663  Q
    |||||    
T  27564735 tcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 555 - 673
Target Start/End: Complemental strand, 44332468 - 44332357
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||||||||||        ||||| | || |||||||||||| ||||||||||||||||| | ||||||||||||||||||| ||    
T  44332468 aaaagagttatgatacataaacaccca-------caatatatctcttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatac 44332376  T
Q  655 tttctctttcttcttctct 673  Q
    |||||||||||||||||||    
T  44332375 tttctctttcttcttctct 44332357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 663
Target Start/End: Complemental strand, 8346498 - 8346384
Alignment:
Q  549 aaaacaaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaa 648  Q
    |||| ||||||||| ||||||||||  |||| |||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||| ||||||    
T  8346498 aaaaaaaaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaa 8346399  T
Q  649 gtacactttctcttt 663  Q
    | |||||||||||||    
T  8346398 gcacactttctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 38632423 - 38632317
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  657 tctcttt 663  Q
    | |||||    
T  38632323 tttcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 45044662 - 45044546
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||| |   |||||||||||||||||||  |||||||||| ||||||||||||||||| | || |||||||||||||||  ||| ||    
T  45044662 aagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattt 45044563  T
Q  657 tctctttcttcttctct 673  Q
    |||||||  ||||||||    
T  45044562 tctcttttctcttctct 45044546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 48716382 - 48716278
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||| || | ||  ||||||||||||||| |||||||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  659 tcttt 663  Q
    |||||    
T  48716282 tcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 37926539 - 37926424
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| | | | ||||||||||||||| || || ||||||||| |||||||||||| |||| || ||||| |||| |||||||||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  658 ctctttcttcttctct 673  Q
    ||||||  ||||||||    
T  37926439 ctcttttctcttctct 37926424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 49811629 - 49811523
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||| ||| ||| ||||||||| |||||||||  |||||| |||||||||||||||||| || | ||||| ||| ||||||||| ||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  657 tctcttt 663  Q
    |||||||    
T  49811529 tctcttt 49811523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 47452420 - 47452316
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||| ||||||||  ||||||||||||||||||||| ||| || | ||  |||| |||||||||| ||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  659 tcttt 663  Q
    |||||    
T  47452320 tcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 44548471 - 44548372
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| ||| | |||||||||||||||||  |||| |||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 51898784 - 51898669
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| | |||||||||||||||||  ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  658 ctctttcttcttctct 673  Q
    || |||| ||| ||||    
T  51898684 ctatttcctctcctct 51898669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 41758804 - 41758909
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||||| |||  ||||||||||||  |||||| |||||||||||||||||| || | || |||||||||||||||  |||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  658 ctcttt 663  Q
    ||||||    
T  41758904 ctcttt 41758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 50630457 - 50630562
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| | ||||||||||||||||||| |  |||  |||||||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  658 ctcttt 663  Q
    ||||||    
T  50630557 ctcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 560 - 664
Target Start/End: Original strand, 44453980 - 44454084
Alignment:
Q  560 agttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttct 659  Q
    |||||||||||||| ||||| ||| ||||||||||| || |||| |||||||||||||||||||||||||  |  |||| ||| |||||| ||||||| |    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttttt 44454079  T
Q  660 ctttc 664  Q
    |||||    
T  44454080 ctttc 44454084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 26440734 - 26440838
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||| |||| ||| ||| |||||| || |||||||||  || |||||||||||||||||||||| |||| || ||||| |||||| ||| ||||||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttc 26440833  T
Q  659 tcttt 663  Q
    |||||    
T  26440834 tcttt 26440838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||  |||||| | ||||||| |  ||||||||||||||||||||||||| || | ||  ||||| ||||||||| ||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  659 tcttt 663  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 37649198 - 37649302
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| | ||||||||||||||||   ||||||||||||||||||||||||| |||| ||  || |  ||||||||| ||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  659 tcttt 663  Q
     ||||    
T  37649298 ccttt 37649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 6260870 - 6260984
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||| ||| | | |||||||||| ||||||||  |  ||||||||| |||||||| |||||||| ||  ||||||||||| ||| ||| ||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  659 tctttcttcttctct 673  Q
    | |||||||| ||||    
T  6260970 tatttcttctcctct 6260984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 673
Target Start/End: Complemental strand, 11152458 - 11152364
Alignment:
Q  579 ccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||||||||||||||||  | |||| |||||||||||||||||| || | ||| | ||||||||||||| || |||||| |||| ||| ||||    
T  11152458 ccttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttctttttcctctcctct 11152364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 564 - 663
Target Start/End: Original strand, 26274437 - 26274536
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| ||||||||| ||||||||||| |  |||||| ||||| ||||||||||||  | | ||  |||| || ||||||||||||||| |||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttcttt 26274536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 559 - 664
Target Start/End: Complemental strand, 3302633 - 3302528
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| ||||||||| ||||| |    | ||||||||||||||||||||||| ||   ||||||||||||  ||||| ||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  659 tctttc 664  Q
    | ||||    
T  3302533 tttttc 3302528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 23597194 - 23597121
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    ||||||| |||||||||| ||| | ||||||||||||||||   |||| ||||||| |||||||||||| ||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtgg 23597121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 631
Target Start/End: Complemental strand, 34340134 - 34340067
Alignment:
Q  563 tatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggac 631  Q
    ||||||||||| |||| ||||||||| ||||||||| ||||   |||||||||||||||||| ||||||    
T  34340134 tatgatacatagacactcttaggtggtaatacacctgttga-tgccacacaaaaatctgacacgtggac 34340067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 7740732 - 7740847
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||  ||| ||||| ||| ||||||| | ||||||||| ||| |||||| ||||| ||||  || |||||||| ||||| || | |||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtggctatgtggaccccacacaaatatatttt 7740831  T
Q  658 ctctttcttcttctct 673  Q
    || |||| ||| ||||    
T  7740832 ctttttcatctcctct 7740847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 663
Target Start/End: Original strand, 13414791 - 13414865
Alignment:
Q  589 caatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||  ||||||||||||||||||||| ||| || | ||  |||||||| |||||| ||| |||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 44112872 - 44112800
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    |||||||  ||||||||  ||||| | | |||||||||||||| || |||||||||||||| ||||||||||||    
T  44112872 aaagagtggtgatacatgtacaccttcatgtggcaatacacctctt-acacccacacaaaattctgacatgtgg 44112800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 602 - 659
Target Start/End: Original strand, 48489343 - 48489400
Alignment:
Q  602 gacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttct 659  Q
    |||| ||||||||||||||||||||||| ||  |||| |||||||||| ||| |||||    
T  48489343 gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 1e-52; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 556 - 673
Target Start/End: Complemental strand, 30341463 - 30341346
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  656 ttctctttcttcttctct 673  Q
    ||||||||||||||||||    
T  30341363 ttctctttcttcttctct 30341346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 15990144 - 15990028
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  657 tctctttcttcttctct 673  Q
    |||||||||||||||||    
T  15990044 tctctttcttcttctct 15990028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 15508124 - 15508010
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  15508024 tctttcttcttctct 15508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 4231548 - 4231662
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||||||| |||||||| | |||||||||||||||||  ||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  4231648 tctttcttcttctct 4231662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 554 - 663
Target Start/End: Original strand, 17598549 - 17598658
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||| |||| |||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||    
T  17598549 aaaatgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  17598649 ctttctcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 31976247 - 31976352
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| ||| ||||||||||||||| |||  || |||||||||||||||||||||| |||| || ||| |||||||||||| |||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  658 ctcttt 663  Q
    ||||||    
T  31976347 ctcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 566 - 663
Target Start/End: Original strand, 32869685 - 32869782
Alignment:
Q  566 gatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 22880753 - 22880654
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||| || | ||  ||||||||||||||| |||||||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 564 - 673
Target Start/End: Complemental strand, 28536581 - 28536474
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||||   || ||| |||||||| |||||| |||||||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcacactttctcttt 28536484  T
Q  664 cttcttctct 673  Q
      ||||||||    
T  28536483 tatcttctct 28536474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 31953130 - 31953016
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||| ||| ||| |||||||||||||||||||  |||||||||||| ||||||||||||||||  ||| |||||| | |||||  ||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||||||||    
T  31953030 tctttcatcttctct 31953016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 556 - 663
Target Start/End: Complemental strand, 6209568 - 6209461
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||| |||||||||| ||||||||||||||||||||||   ||||||| |||||||||||||| || || | ||  |||||||||||| || |||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  656 ttctcttt 663  Q
    ||||||||    
T  6209468 ttctcttt 6209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 555 - 663
Target Start/End: Complemental strand, 31110863 - 31110757
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||| ||| |||||||||||||||||||  ||||||  | ||||||||||||||| ||   || |||||||| ||||||| ||||    
T  31110863 aaaagagttatgatacatagacatccttaggtggcaatacaccctttgaca--ctcacaaaaatctgacacgtaaccacatggaccctgcacaagcacac 31110766  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  31110765 tttctcttt 31110757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 11427615 - 11427722
Alignment:
Q  558 agagttatgatacataaacaccct--taggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||| |||||||||| |||||||  |||||||||||||| |  ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  656 ttctcttt 663  Q
    ||||||||    
T  11427715 ttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 575 - 663
Target Start/End: Complemental strand, 31109484 - 31109396
Alignment:
Q  575 acacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||||| || | ||  | ||||||||| |||||||||||||||||    
T  31109484 acacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttctcttt 31109396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 29857827 - 29857941
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||| |||| ||||||||||||| || |||||||||||||||||||||| || |  |  |||| |||||| ||| ||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  659 tctttcttcttctct 673  Q
    |||||  ||||||||    
T  29857927 tcttttctcttctct 29857941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 673
Target Start/End: Original strand, 12732477 - 12732596
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||| |||||||||| |||  |||| ||||||||| |   |||||||||||||||||||||||||| ||||  || |||| ||| || ||| |||    
T  12732477 aaaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcaca 12732576  T
Q  654 ctttctctttcttcttctct 673  Q
     |||||||||| ||| ||||    
T  12732577 ttttctctttcatctcctct 12732596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 555 - 673
Target Start/End: Original strand, 15832573 - 15832691
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||| |||||||||| ||||| ||||||| ||||| | |  ||||||||||||||||||| ||||| || | ||  |||| || |||||| ||||     
T  15832573 aaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacat 15832672  T
Q  655 tttctctttcttcttctct 673  Q
    ||||||||| |||| ||||    
T  15832673 tttctcttttttctcctct 15832691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 563 - 673
Target Start/End: Complemental strand, 9379808 - 9379698
Alignment:
Q  563 tatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctt 662  Q
    ||||||||||| ||| |||||| || ||||||| |  |||||||||| |||||||| ||||| |||| ||| |||| | | |||||  ||| ||||||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctt 9379709  T
Q  663 tcttcttctct 673  Q
    || ||||||||    
T  9379708 tcatcttctct 9379698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 603 - 673
Target Start/End: Original strand, 30870058 - 30870128
Alignment:
Q  603 acacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    ||||||| | |||||||| |||||||| || |||||||||||||||| ||| |||||||||| ||| ||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctct 30870128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 663
Target Start/End: Complemental strand, 23128231 - 23128123
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||| | |||||| ||| ||||| ||| |||  |||||| |  ||||||||||||||||||||||||| || | ||  |||| ||| |||||| ||||    
T  23128231 aaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 23128132  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  23128131 tttctcttt 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 558 - 625
Target Start/End: Complemental strand, 22422119 - 22422052
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacat 625  Q
    ||||| |||||||||| ||| ||||||||||||||| | || ||||||| || |||||| ||||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgacat 22422052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 556 - 673
Target Start/End: Complemental strand, 3921368 - 3921251
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  656 ttctctttcttcttctct 673  Q
    ||||||||||||||||||    
T  3921268 ttctctttcttcttctct 3921251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 2252269 - 2252154
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||||||||||    
T  2252169 ctctttcttcttctct 2252154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 557 - 669
Target Start/End: Complemental strand, 39688999 - 39688887
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||||||||||||| ||||||||||| |  ||||||||||||||||||||||| |||||| |||||| |||||||| ||||||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  657 tctctttcttctt 669  Q
    |||||||||||||    
T  39688899 tctctttcttctt 39688887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 28177775 - 28177879
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||| |||| || |||||||||||||||  ||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  659 tcttt 663  Q
    |||||    
T  28177875 tcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 6679697 - 6679802
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| ||| | |||||||||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||  ||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  658 ctcttt 663  Q
    ||||||    
T  6679797 ctcttt 6679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 554 - 663
Target Start/End: Complemental strand, 18520989 - 18520880
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||| | |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||    
T  18520989 aaaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  18520889 ctttctcttt 18520880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 555 - 662
Target Start/End: Original strand, 13811648 - 13811755
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||| | |||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  655 tttctctt 662  Q
    ||||||||    
T  13811748 tttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 26720516 - 26720630
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  || ||||| ||| |||||||||||| |||| || ||||| |||||||||| ||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  659 tctttcttcttctct 673  Q
    |||||  ||||||||    
T  26720616 tcttttctcttctct 26720630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 26990265 - 26990379
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  || ||||| ||| |||||||||||| |||| || ||||| |||||||||| ||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  659 tctttcttcttctct 673  Q
    |||||  ||||||||    
T  26990365 tcttttctcttctct 26990379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 36733044 - 36732938
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||  | | ||  ||||||||||||||| ||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  657 tctcttt 663  Q
    |||||||    
T  36732944 tctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 2740273 - 2740378
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  658 ctcttt 663  Q
    ||||||    
T  2740373 ctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 35785199 - 35785303
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || |  |  |||| |||||||||  ||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  659 tcttt 663  Q
    |||||    
T  35785299 tcttt 35785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 40145407 - 40145511
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||  || ||| |||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  659 tcttt 663  Q
    |||||    
T  40145507 tcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 42414402 - 42414298
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||  ||||||||||||||||  ||||||||||||||||||||||||| || | ||| ||||||||||||||| |||||||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  659 tcttt 663  Q
    |||||    
T  42414302 tcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 15409712 - 15409606
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||| ||| ||||||||| |||||||    ||||||||||||||||||||||||| || | || |||||||||||||||| |||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  657 tctcttt 663  Q
    |||||||    
T  15409612 tctcttt 15409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 35943992 - 35943878
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||| || |  |  |||| ||| |||||| ||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  35943892 tctttcctctcctct 35943878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 552 - 673
Target Start/End: Original strand, 14831807 - 14831928
Alignment:
Q  552 acaaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagta 651  Q
    |||||| |||| |||||||||| |||| ||||||||||||||||||  |||||||||||| |||||||||||| || | ||  |||| |||||||||| |    
T  14831807 acaaaatgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagca 14831906  T
Q  652 cactttctctttcttcttctct 673  Q
    |||||||| ||| |||| ||||    
T  14831907 cactttcttttttttctcctct 14831928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 33149738 - 33149634
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||| ||||||||  ||||||||||||||||||| ||||| || | ||  |||| |||||||||| ||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  659 tcttt 663  Q
    |||||    
T  33149638 tcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 673
Target Start/End: Original strand, 31008984 - 31009102
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||||||| ||||||||| |||||||    |  |||||||||||||||||||||| || | ||  |||| |||||||||| ||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  655 tttctctttcttcttctct 673  Q
    ||||| |||| ||||||||    
T  31009084 tttctatttcctcttctct 31009102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 554 - 618
Target Start/End: Complemental strand, 36875708 - 36875644
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaat 618  Q
    ||||| ||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||||    
T  36875708 aaaaaaagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 557 - 664
Target Start/End: Original strand, 9603811 - 9603918
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||| |||||||||  |||||||  ||| ||||| ||||||||||||||||  ||| ||||||||||||  ||||  ||||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactt 9603910  T
Q  657 tctctttc 664  Q
    ||||||||    
T  9603911 tctctttc 9603918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 564 - 673
Target Start/End: Original strand, 16327906 - 16328015
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||| ||||| | ||||||||||||||||| | ||||||||||||| |||||||||||| |||  ||| || ||| | |||||| ||||||| |||||    
T  16327906 atgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttcttt 16328005  T
Q  664 cttcttctct 673  Q
    | | ||||||    
T  16328006 cattttctct 16328015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 563 - 622
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  563 tatgatacataaacacccttaggtggcaataca-cctattgacacccacacaaaaatctga 622  Q
    ||||||||||| ||| ||||||||||||||||| || ||||||||||||||||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 6260101 - 6259987
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| || |||||| |||||||||  || |||||||| ||||||||| |||  ||| || ||||||| | || ||| ||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  6260001 tctttcatctcctct 6259987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 33825424 - 33825310
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| ||||| |||| |||  |||||||||||||||||   |||||||||||| |||||||||||| |||  ||| || |||   |||||| ||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  659 tctttcttcttctct 673  Q
    |||||  ||||||||    
T  33825324 tcttttatcttctct 33825310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 603 - 664
Target Start/End: Original strand, 21370048 - 21370109
Alignment:
Q  603 acacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttc 664  Q
    |||||||| |||||||||||||||||| ||  ||||||||||||||  ||| ||||||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttc 21370109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 582 - 663
Target Start/End: Complemental strand, 39557594 - 39557513
Alignment:
Q  582 taggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    ||||||| ||||||||| || ||| |||||||||||||||||| |||  || |||||||||  ||||  |||||||||||||    
T  39557594 taggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttt 39557513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 556 - 624
Target Start/End: Original strand, 38296200 - 38296268
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    |||||||||||||||||| ||   |||||||| |||||||||| || | ||||||||||||||| ||||    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagaca 38296268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 585 - 629
Target Start/End: Original strand, 32473328 - 32473371
Alignment:
Q  585 gtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    |||||||||||||| || |||||||||||||| ||||||||||||    
T  32473328 gtggcaatacacctctt-acacccacacaaaattctgacatgtgg 32473371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 7e-51; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 555 - 673
Target Start/End: Complemental strand, 19670820 - 19670702
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19670820 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 19670721  T
Q  655 tttctctttcttcttctct 673  Q
    |||||||||||||||||||    
T  19670720 tttctctttcttcttctct 19670702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 557 - 673
Target Start/End: Original strand, 55475189 - 55475305
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  657 tctctttcttcttctct 673  Q
    |||||||||||||||||    
T  55475289 tctctttcttcttctct 55475305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 557 - 672
Target Start/End: Original strand, 32766956 - 32767071
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  657 tctctttcttcttctc 672  Q
    ||||||||||||||||    
T  32767056 tctctttcttcttctc 32767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 47986207 - 47986322
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||| ||||||    
T  47986307 ctctttcttattctct 47986322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 50813993 - 50813878
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||||||||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||||||||||    
T  50813893 ctctttcttcttctct 50813878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 55079814 - 55079699
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatgga-ccccgcacaagtacacttt 657  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||||||||||    
T  55079714 ctctttcttcttctct 55079699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 577 - 673
Target Start/End: Complemental strand, 17983825 - 17983729
Alignment:
Q  577 acccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 17983729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 29548061 - 29547945
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  657 tctctttcttcttctct 673  Q
    | |||||||||||||||    
T  29547961 tttctttcttcttctct 29547945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 8343263 - 8343149
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||||||| ||||||||||||||||| |  |||||||| ||| ||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  8343163 tctttcttcttctct 8343149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 44536846 - 44536732
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||||||||  |||||||||||||||||  |||||| ||||||||||||||||||||||| ||||| |||||| || |||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||||||||||    
T  44536747 ctctttcttcttctct 44536732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 18924595 - 18924481
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||||||| |||||| |||||||||||||||||||||  |||| | |||||||||||||||||||||||  ||||| || ||||||||||||||||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactttc 18924496  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  18924495 tctttcttcttctct 18924481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 567 - 673
Target Start/End: Complemental strand, 29589831 - 29589726
Alignment:
Q  567 atacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttctt 666  Q
    |||||||||||||||||| || |||||||||  ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttctt 29589733  T
Q  667 cttctct 673  Q
    |||||||    
T  29589732 cttctct 29589726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 554 - 673
Target Start/End: Complemental strand, 50052533 - 50052414
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||    
T  50052533 aaaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||| ||| ||||    
T  50052433 ctttctctttcctctcctct 50052414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 6034044 - 6034148
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| | ||  |||| |||||||||| ||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  659 tcttt 663  Q
    |||||    
T  6034144 tcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  659 tcttt 663  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 11511562 - 11511448
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||  |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  659 tctttcttcttctct 673  Q
    |||||  ||||||||    
T  11511462 tcttttctcttctct 11511448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 48183151 - 48183045
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||||||||| |||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  657 tctcttt 663  Q
    |||||||    
T  48183051 tctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 554 - 663
Target Start/End: Complemental strand, 480552 - 480443
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||| || | ||  ||||||||| ||||| |||    
T  480552 aaaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  480452 ctttctcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 557 - 673
Target Start/End: Original strand, 29977883 - 29977999
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| | | || ||||||||||||||||  || |||||||||||||||||||||| || | |||||||||||| |||||| ||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  657 tctctttcttcttctct 673  Q
    |||||||| ||||||||    
T  29977983 tctctttcatcttctct 29977999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 556 - 673
Target Start/End: Original strand, 29239883 - 29240000
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||| |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||| ||| || | ||  |||||||| |||||| |||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  656 ttctctttcttcttctct 673  Q
    ||||||||| ||| ||||    
T  29239983 ttctctttcctctcctct 29240000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 554 - 663
Target Start/End: Complemental strand, 42044472 - 42044363
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||| |||||||||| ||||||||||||||||||||| |  |  |||||||||||||||||||||| || | ||  ||||||||||||||| |||    
T  42044472 aaaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  42044372 ctttctcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 31910192 - 31910296
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| ||||||||| ||||||||   |||||||||||||||||||||||||  | | || |||||||||||||||| ||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  659 tcttt 663  Q
    |||||    
T  31910292 tcttt 31910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 54473633 - 54473529
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||| ||| || | ||  ||||||||||||||| |||||||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  659 tcttt 663  Q
    |||||    
T  54473533 tcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 559 - 664
Target Start/End: Original strand, 3481654 - 3481759
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||| ||||||||||||||||   |||||||||||||||||||||||||  | | ||  |||||||| |||||| ||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  659 tctttc 664  Q
    ||||||    
T  3481754 tctttc 3481759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 29234346 - 29234241
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| |||||||||| ||||||||||||  |||| |||  ||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  658 ctcttt 663  Q
    ||||||    
T  29234246 ctcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 40574779 - 40574883
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||| ||||||||  ||||||||||||||||||||||||| |  |  | ||||| |||| ||||| ||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  659 tcttt 663  Q
    |||||    
T  40574879 tcttt 40574883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 48647828 - 48647712
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||| ||||||||| ||||||||  |||||||||| || ||||||||| |||||||| ||| |||| ||  ||||| ||||||||| ||| ||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatt 48647729  T
Q  657 tctctttcttcttctct 673  Q
    |||||||| ||| ||||    
T  48647728 tctctttcctctcctct 48647712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 28480369 - 28480254
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||| ||||||| ||| ||||||||| |||||||| | || |||| |||||||||||||||||||| | ||| |||||||| |||||  |||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  658 ctctttcttcttctct 673  Q
    ||| ||| ||| ||||    
T  28480269 ctccttcatctcctct 28480254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 28481244 - 28481129
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||| ||||||| ||| ||||||||| |||||||| | || |||| |||||||||||||||||||| | ||| |||||||| |||||  |||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  658 ctctttcttcttctct 673  Q
    ||| ||| ||| ||||    
T  28481144 ctccttcatctcctct 28481129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 28482119 - 28482004
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||| ||||||| ||| ||||||||| |||||||| | || |||| |||||||||||||||||||| | ||| |||||||| |||||  |||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  658 ctctttcttcttctct 673  Q
    ||| ||| ||| ||||    
T  28482019 ctccttcatctcctct 28482004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 50526271 - 50526157
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| | |||||||||||||||||  ||||||||||||||||||||||||| |||| ||  ||||  ||||||||| || |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  659 tctttcttcttctct 673  Q
    | |||| ||| ||||    
T  50526171 tatttcctctcctct 50526157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 23608233 - 23608339
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||| ||| |||||||||| || |||||||||  ||||||||||||||||||||||||| || | ||  || || || |||||| ||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  657 tctcttt 663  Q
    |||||||    
T  23608333 tctcttt 23608339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 24995209 - 24995103
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||| ||  |||||||||| ||||||||||||  |||||||||||| |||||| ||||| || | ||  ||||||||||||||| ||| ||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  657 tctcttt 663  Q
    |||||||    
T  24995109 tctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 603 - 663
Target Start/End: Original strand, 41823926 - 41823986
Alignment:
Q  603 acacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||||||||||||||| || | || |||||||||||||||| |||||||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttt 41823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 600 - 673
Target Start/End: Complemental strand, 56300224 - 56300151
Alignment:
Q  600 ttgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||| ||||||||||||||||||||||| |||||| | || ||||||  |||||||||||||| ||| ||||    
T  56300224 ttgacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctct 56300151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 563 - 664
Target Start/End: Original strand, 18769113 - 18769214
Alignment:
Q  563 tatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctt 662  Q
    ||||||||||||||| ||||| ||  | |||||||   | |||||||||||||||||||||| |||| ||| |  ||||| ||||| |||| ||||||||    
T  18769113 tatgatacataaacatccttatgtacccatacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctt 18769212  T
Q  663 tc 664  Q
    ||    
T  18769213 tc 18769214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 663
Target Start/End: Complemental strand, 53352661 - 53352562
Alignment:
Q  563 tatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctt 662  Q
    ||||||||||| ||||||||||||| |||||||    || ||||| |||||||||||||||| || |  |  ||||||||||||||| | ||||||||||    
T  53352661 tatgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctctt 53352563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 601 - 673
Target Start/End: Original strand, 47104586 - 47104658
Alignment:
Q  601 tgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||||||||||||||| ||||| ||||   ||| |||||| |||||  |||||||||||||| ||| ||||    
T  47104586 tgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttctctttcatctcctct 47104658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 4e-49; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 22343360 - 22343475
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||||||||||    
T  22343460 ctctttcttcttctct 22343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 41915740 - 41915855
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  658 ctctttcttcttctct 673  Q
    ||||||||||||||||    
T  41915840 ctctttcttcttctct 41915855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 557 - 673
Target Start/End: Original strand, 38044195 - 38044311
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  657 tctctttcttcttctct 673  Q
    |||||||||||||||||    
T  38044295 tctctttcttcttctct 38044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 551 - 673
Target Start/End: Original strand, 7727898 - 7728020
Alignment:
Q  551 aacaaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagt 650  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |||| ||||||||||||||||| ||||||||||||||||||||    
T  7727898 aacaaaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagt 7727997  T
Q  651 acactttctctttcttcttctct 673  Q
    ||||||||| |||||||||||||    
T  7727998 acactttctgtttcttcttctct 7728020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 554 - 673
Target Start/End: Original strand, 8238207 - 8238327
Alignment:
Q  554 aaaaagagttatgatacataaacaccct-taggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtac 652  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  8238207 aaaatgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtac 8238306  T
Q  653 actttctctttcttcttctct 673  Q
    |||||||||||||||||||||    
T  8238307 actttctctttcttcttctct 8238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 32564526 - 32564412
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||||||||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  32564426 tctttcttcttctct 32564412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 40846213 - 40846099
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||||||| |||||| |  ||||||||||||||||| |||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  40846113 tctttcttcttctct 40846099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 560 - 663
Target Start/End: Original strand, 35522877 - 35522980
Alignment:
Q  560 agttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttct 659  Q
    |||||||||||||| ||| ||||| |||||||||||||  || |||||||||||||||||||||| |||| |||||||| |||||||||| |||||||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  660 cttt 663  Q
    ||||    
T  35522977 cttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 7389387 - 7389493
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||||||||||||||||||||||   ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  657 tctcttt 663  Q
    |||||||    
T  7389487 tctcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 19329842 - 19329946
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||| ||   ||  ||||||||||||||| ||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  659 tcttt 663  Q
    |||||    
T  19329942 tcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 557 - 673
Target Start/End: Original strand, 36208171 - 36208287
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||| |||||||||||||| ||||||   ||||||||||||||||||| ||||||||||| ||  ||||||| ||||||| ||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  657 tctctttcttcttctct 673  Q
    |||||||| ||| ||||    
T  36208271 tctctttcctctcctct 36208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 564 - 663
Target Start/End: Original strand, 3784000 - 3784099
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| || | ||  |||| |||||||||| |||||||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 8080485 - 8080379
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| |||||||||||||||||||||||  |||||||| ||| |||||||||||| || | ||  ||||||||||||||| ||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  657 tctcttt 663  Q
    |||||||    
T  8080385 tctcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 555 - 673
Target Start/End: Original strand, 18207176 - 18207293
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| |||||||||| ||| |||| ||  || ||||| |||||| ||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacac 18207274  T
Q  655 tttctctttcttcttctct 673  Q
    |||||||||| ||| ||||    
T  18207275 tttctctttcatctcctct 18207293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 36362014 - 36361909
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||||||||||||||||||||| |  ||||||||||||||||||||||||| || | ||  |||||||| |||||| |||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  658 ctcttt 663  Q
    ||||||    
T  36361914 ctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 4999614 - 4999510
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||| | || | ||  ||||||||||||||  ||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  659 tcttt 663  Q
    |||||    
T  4999514 tcttt 4999510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 557 - 673
Target Start/End: Complemental strand, 19436289 - 19436173
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||||||| || | ||  |||| |||||| ||| ||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  657 tctctttcttcttctct 673  Q
    |||||||  ||||||||    
T  19436189 tctcttttctcttctct 19436173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 38267040 - 38267144
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||||||| ||| |||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  659 tcttt 663  Q
    |||||    
T  38267140 tcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 555 - 663
Target Start/End: Original strand, 38837213 - 38837321
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||| |||||||||| |||||||||||||||||||||||  |  ||||| |||||||||||||||| || | ||  ||||||||||||||| ||||    
T  38837213 aaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 38837312  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  38837313 tttctcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 564 - 663
Target Start/End: Original strand, 3694372 - 3694471
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||| ||| ||||||||||||| |||||||||| || |||||||||||||||||||||| || | ||| |||| |||||||||| |||||||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 559 - 649
Target Start/End: Complemental strand, 46374902 - 46374812
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaag 649  Q
    ||||||||||||||| ||| ||||||||||||| |||||  || |||||||||||||||||||||| |||| || ||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaag 46374812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 3434561 - 3434666
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| |||||||||||||||||||  |||||||||||||||||| |||||| || | ||  |||| |||||||||| |||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  658 ctcttt 663  Q
    ||||||    
T  3434661 ctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 554 - 663
Target Start/End: Original strand, 35137528 - 35137637
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||| |||| |||||| ||| |||||||||||||||||||||||  ||||||||||||||||||||| ||| || | ||  ||||||||||||||  |||    
T  35137528 aaaatgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  35137628 ctttctcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 36362025 - 36362130
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| |||||||||||||| |||||| |  ||||||||||||||||||||||||| || | ||  |||||||| |||||| |||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  658 ctcttt 663  Q
    ||||||    
T  36362125 ctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 39256023 - 39255910
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  |||| ||||| |||||||||||||| |||| ||  ||||| || |||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacactttc 39255925  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  39255924 tctttcatctcctct 39255910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 556 - 624
Target Start/End: Complemental strand, 10343666 - 10343598
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    ||||||| |||||||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 559 - 662
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| ||||||||| |||||||||  ||||||| ||||||||||| ||||| || | || ||| |||||||||||| ||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  659 tctt 662  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 556 - 663
Target Start/End: Original strand, 40957704 - 40957811
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||| |||||||||| |||| |||||||||||||||||   |||| |||||||||||||||||||| || | ||  |||| |||| ||||| |||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  656 ttctcttt 663  Q
    ||||||||    
T  40957804 ttctcttt 40957811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 554 - 664
Target Start/End: Complemental strand, 35468960 - 35468850
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    ||||||||| |||||||||| ||| |||||| |||||||||| |  |||||||||||| |||||||| | |||||  ||| ||||||| ||||||  |||    
T  35468960 aaaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacaca 35468861  T
Q  654 ctttctctttc 664  Q
    |||||||||||    
T  35468860 ctttctctttc 35468850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 26296643 - 26296748
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| ||| ||||||||| ||||| |||  || ||| ||||| |||||||||| | |||| |||||||||||||||||||  || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  658 ctcttt 663  Q
    ||||||    
T  26296743 ctcttt 26296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 564 - 664
Target Start/End: Complemental strand, 2318338 - 2318238
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    ||||||||| |||| || |||||||||| |||||| |||||||||||||||||||||||| ||||| ||  |||||||  || ||| | |||||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  664 c 664  Q
    |    
T  2318238 c 2318238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 46033902 - 46033797
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| | |  ||||||||||||||||||  || ||||||||| |||||||||||| |||| || ||| || ||||||||| | | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  658 ctcttt 663  Q
    ||||||    
T  46033802 ctcttt 46033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 629
Target Start/End: Original strand, 41423682 - 41423752
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    ||||||||||||||| ||| | |||| ||| ||||||||| |||||||  |||||||||||||||||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtgg 41423752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 32951588 - 32951489
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| |||| ||||| || ||||||| |  || ||| |||||||||||||| ||| || | ||  ||||||||||||||| |||||||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 32951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 31735884 - 31735981
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| ||||||||||||||||||   || ||||||||||||       ||| |||| || ||||| |||||||||| ||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcacactttc 31735976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 556 - 664
Target Start/End: Original strand, 11044185 - 11044283
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||| |||||||||| ||||||||||||||||||||| |  |||||||||          |||||| || | ||  |||||||||||||||||||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacact 11044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 565 - 629
Target Start/End: Complemental strand, 43317629 - 43317566
Alignment:
Q  565 tgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    ||||||||  ||||||||  |||||||||||||  || |||||||||||||| ||||||||||||    
T  43317629 tgatacatgtacacccttgtgtggcaatacacccctt-acacccacacaaaattctgacatgtgg 43317566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 1e-46; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 554 - 673
Target Start/End: Complemental strand, 45097840 - 45097721
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  45097840 aaaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtaca 45097741  T
Q  654 ctttctctttcttcttctct 673  Q
    ||||||||||||||||||||    
T  45097740 ctttctctttcttcttctct 45097721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 43490121 - 43490235
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttta 43490220  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  43490221 tctttcttcttctct 43490235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 38732354 - 38732468
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||||||||||||| ||| ||||||| |  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  38732454 tctttcttcttctct 38732468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 554 - 673
Target Start/End: Original strand, 13365346 - 13365467
Alignment:
Q  554 aaaaagagttatgatacataaacac--ccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagta 651  Q
    |||||||||||||||||||||||||  |||||| |||||||| |||  |||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13365346 aaaaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagta 13365445  T
Q  652 cactttctctttcttcttctct 673  Q
    ||||||||||||||||||||||    
T  13365446 cactttctctttcttcttctct 13365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 577 - 673
Target Start/End: Complemental strand, 2997569 - 2997473
Alignment:
Q  577 acccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 2997473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 40614002 - 40613898
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  ||||||||||||||||||||||||| |||| || |||||||||||||||| ||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  659 tcttt 663  Q
    |||||    
T  40613902 tcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 9058478 - 9058584
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||| ||||||||||||||| ||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  657 tctcttt 663  Q
    |||||||    
T  9058578 tctcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 10249484 - 10249378
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  657 tctcttt 663  Q
    |||||||    
T  10249384 tctcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 556 - 673
Target Start/End: Complemental strand, 26891607 - 26891490
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacact 655  Q
    ||||||||||||||||||  ||||||||||||||||||||||  | |||||||||||||||||||||||||||| ||  |||||| || ||||| ||| |    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  656 ttctctttcttcttctct 673  Q
    ||||||||| ||||||||    
T  26891507 ttctctttcctcttctct 26891490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 555 - 664
Target Start/End: Complemental strand, 33436204 - 33436095
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| ||| || | ||  ||||||||||||||| ||||    
T  33436204 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacac 33436105  T
Q  655 tttctctttc 664  Q
    ||||||||||    
T  33436104 tttctctttc 33436095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 28381755 - 28381651
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||| || | || |||||| ||||||||| ||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  659 tcttt 663  Q
    |||||    
T  28381655 tcttt 28381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 555 - 663
Target Start/End: Original strand, 42257189 - 42257297
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||| ||| | ||||||||||||||| |  |||||||||||| |||||||||||| |||| || |||||||||||||||| ||||    
T  42257189 aaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacac 42257288  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  42257289 tttctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 564 - 663
Target Start/End: Original strand, 28863460 - 28863559
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||||||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 558 - 659
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| || | ||  ||||||||||||||| |||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  658 ct 659  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 40701478 - 40701582
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || |  |  ||||||||||||||  ||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  659 tcttt 663  Q
    |||||    
T  40701578 tcttt 40701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 19930915 - 19930816
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||||| || | ||| ||||||||||||||  |||||||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 7465836 - 7465731
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||| || | ||  |||||||| |||||| |||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  658 ctcttt 663  Q
    ||||||    
T  7465736 ctcttt 7465731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 609 - 673
Target Start/End: Complemental strand, 3035033 - 3034969
Alignment:
Q  609 acacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  3035033 acacaaaaatctgacatgtggtcatatggaccccgcacaagtatactttctctttcttcttctct 3034969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 13438343 - 13438447
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||||||||||| ||||||| |  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  659 tcttt 663  Q
    |||||    
T  13438443 tcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||||||| || | ||  |||| |||||||||| ||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  659 tcttt 663  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 555 - 663
Target Start/End: Complemental strand, 38273246 - 38273138
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||| |||  ||||| ||||||||||||  || |||||||||||||||||||||| || | || ||||||||||||| || ||||    
T  38273246 aaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacac 38273147  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  38273146 tttctcttt 38273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 552 - 663
Target Start/End: Original strand, 30915456 - 30915567
Alignment:
Q  552 acaaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagta 651  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||  ||||| |||||| |||||||||||| || | ||  ||||||||| ||||| |    
T  30915456 acaagaagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagca 30915555  T
Q  652 cactttctcttt 663  Q
    ||||||||||||    
T  30915556 cactttctcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 558 - 663
Target Start/End: Complemental strand, 5574589 - 5574484
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| |||| ||||||||||||||||||  |||||||||||| |||||||||||| || | ||  |||| |||||||||| |||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  658 ctcttt 663  Q
    ||||||    
T  5574489 ctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 17820104 - 17819990
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |  ||||||||||||||||  ||||||||||||||||||||||||||||||  |  |||||||| |||||  ||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  17820004 tctttcatctcctct 17819990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 555 - 673
Target Start/End: Original strand, 20700811 - 20700929
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||  ||||| || |||||||||||||||| || | ||  ||||||||||| ||| ||||    
T  20700811 aaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacac 20700910  T
Q  655 tttctctttcttcttctct 673  Q
    |||||||||| ||| ||||    
T  20700911 tttctctttcctctcctct 20700929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 559 - 665
Target Start/End: Original strand, 27864704 - 27864810
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||||||| |||||||||||||  |||||| |||||||||||||||||| ||   ||  ||||||||||| ||| ||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  659 tctttct 665  Q
    |||||||    
T  27864804 tctttct 27864810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 558 - 664
Target Start/End: Original strand, 33436210 - 33436316
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| |||||| ||||||||||||| |||||||||||| |||||||||||| |||  ||| |||||   ||||||| |||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  658 ctctttc 664  Q
    |||||||    
T  33436310 ctctttc 33436316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 2533123 - 2533227
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| ||| ||||| ||||||||||| |  |||||||| |||||||||||||||| || | || || ||||||||||||| |||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T
Q  658 ctcttt 663  Q
     |||||    
T  2533222 ttcttt 2533227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 559 - 624
Target Start/End: Original strand, 4060685 - 4060750
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    |||| |||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgaca 4060750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 36168835 - 36168940
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||||||||||||||| ||| |||||| || ||||||| |  || || ||||||||||||| ||||| |||| || |||||||||||||||| | |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  658 ctcttt 663  Q
    ||||||    
T  36168935 ctcttt 36168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 565 - 673
Target Start/End: Original strand, 3439985 - 3440093
Alignment:
Q  565 tgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttc 664  Q
    |||||| || ||||||||||||||||||||||   | ||||||||||||||||||| |||||||   |  ||||||||||||||| ||| ||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  665 ttcttctct 673  Q
     ||| ||||    
T  3440085 ctctcctct 3440093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 557 - 629
Target Start/End: Complemental strand, 15428842 - 15428770
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    ||||||||||||||||||||| ||||| ||||| |||||||  || |||| ||||||||||||||||||||||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtgg 15428770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 602 - 673
Target Start/End: Original strand, 3737986 - 3738057
Alignment:
Q  602 gacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| ||| ||||| |||| ||| ||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctcctct 3738057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 564 - 673
Target Start/End: Original strand, 41575142 - 41575252
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggacccc-gcacaagtacactttctctt 662  Q
    |||||||||| ||| |||||| ||| ||||||||  ||||||  ||||||||||| |||||||||| ||| ||||||||  |||||| ||||||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  663 tcttcttctct 673  Q
    || ||| ||||    
T  41575242 tcatctcctct 41575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 556 - 624
Target Start/End: Complemental strand, 38882916 - 38882849
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    ||||||| |||||||||| ||||||||||||||||||| |||  |||||| ||||||||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgaca 38882849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 2e-41; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 45058652 - 45058539
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  659 tctttcttcttctct 673  Q
    |||||||||||||||    
T  45058553 tctttcttcttctct 45058539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 581 - 673
Target Start/End: Complemental strand, 36331407 - 36331315
Alignment:
Q  581 ttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctct 673  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctct 36331315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 562 - 673
Target Start/End: Original strand, 42823114 - 42823225
Alignment:
Q  562 ttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctct 661  Q
    |||||||||||||||||| ||| |||| ||||||||  |||||||||||| |||||| |||||||||| ||||||||||||||| ||||| |||||||||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctct 42823213  T
Q  662 ttcttcttctct 673  Q
    ||||| ||||||    
T  42823214 ttcttattctct 42823225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 26141632 - 26141528
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||||||||||||||||  || |||||||||||||||||||||| |||| || ||||||||| |||||| ||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  659 tcttt 663  Q
    |||||    
T  26141532 tcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 53982011 - 53982115
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  659 tcttt 663  Q
    |||||    
T  53982111 tcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 562 - 673
Target Start/End: Original strand, 26754698 - 26754809
Alignment:
Q  562 ttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctct 661  Q
    ||||||| |||| |||||||||||||||||||||||  | |||| ||||||||||||||||||||||| || |||||||||||||||| ||| |||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  662 ttcttcttctct 673  Q
    ||| ||| ||||    
T  26754798 ttcctctcctct 26754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 8076393 - 8076507
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| ||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||| || | ||  ||||||||||||||| ||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  8076493 tctttcctctcctct 8076507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Original strand, 11907369 - 11907475
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||| ||||||||||||| ||||||||   |  |||| |||||||||||||||||||||| ||||||||||||||||||| ||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  657 tctcttt 663  Q
    |||||||    
T  11907469 tctcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 14623939 - 14623825
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| |||||||||||||||||||  |||||||||||| ||||||||||||||||  ||| |||||| | |||||| ||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||||||||    
T  14623839 tctttcatcttctct 14623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 663
Target Start/End: Original strand, 31456679 - 31456793
Alignment:
Q  549 aaaacaaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaa 648  Q
    |||| ||||| ||| |||||||||| |||||| |||| |||||||||||  ||||||||||||||||||||||||| || | ||| ||||||||||||||    
T  31456679 aaaaaaaaaaaagtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaa 31456778  T
Q  649 gtacactttctcttt 663  Q
    | |||||||||||||    
T  31456779 gcacactttctcttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 41189866 - 41189760
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    ||||||||||||||||| ||| ||||||||||||||||| |  |||||||||||| |||||| ||||| |||| || |||||||||||||||| ||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  657 tctcttt 663  Q
    |||||||    
T  41189766 tctcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 557 - 663
Target Start/End: Complemental strand, 54868997 - 54868891
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| || |  |  ||||||||||||||  ||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  657 tctcttt 663  Q
    |||||||    
T  54868897 tctcttt 54868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 557 - 662
Target Start/End: Complemental strand, 27714993 - 27714888
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||| |||||||||| ||||| |||||||| ||||||||  ||||||||||||||||||||||||| || | ||| ||||||||||||||| ||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  657 tctctt 662  Q
    ||||||    
T  27714893 tctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 33644200 - 33644304
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||||||||| ||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  659 tcttt 663  Q
    |||||    
T  33644300 tcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 559 - 663
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||| ||||||||||||| || ||| |||||||| ||||||||| |||| |||||| |||||||||||| ||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  659 tcttt 663  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 555 - 663
Target Start/End: Original strand, 49607410 - 49607518
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    |||||||| |||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  |||| ||| |||||| ||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  49607510 tttctcttt 49607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 563 - 663
Target Start/End: Original strand, 52629304 - 52629404
Alignment:
Q  563 tatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctt 662  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||| || | ||  ||||||||| ||||| ||||||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  663 t 663  Q
    |    
T  52629404 t 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 564 - 673
Target Start/End: Complemental strand, 13898150 - 13898041
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||| ||||||| |||||||||||||||||||  |||||||||||| |||||||||||| |||  ||| |||||| | |||||| |||||||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  664 cttcttctct 673  Q
    | ||||||||    
T  13898050 catcttctct 13898041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 558 - 663
Target Start/End: Original strand, 17470404 - 17470509
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||||| |||||||||||||||||| || |||||||||||||||||||||| || | ||  |||||||| |||||| |||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  658 ctcttt 663  Q
    ||||||    
T  17470504 ctcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 555 - 663
Target Start/End: Complemental strand, 11348026 - 11347918
Alignment:
Q  555 aaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacac 654  Q
    ||||||||||||||||||| ||| ||||||||| ||||||| |  |||||| |||||||||||||||||| |||| || |||||||| ||| ||| ||||    
T  11348026 aaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacac 11347927  T
Q  655 tttctcttt 663  Q
    |||||||||    
T  11347926 tttctcttt 11347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 20765015 - 20764911
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||| ||||| ||| |||||||||| |||||||   || |||||||||||||||||||||| |||| || |||||||||| ||||| ||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  659 tcttt 663  Q
    |||||    
T  20764915 tcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 564 - 664
Target Start/End: Complemental strand, 30801828 - 30801728
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| |||||||||||||  ||||||||  |||| |||||||||||||| |||||||| | |||||||||||| |||||| ||| |||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  664 c 664  Q
    |    
T  30801728 c 30801728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 559 - 663
Target Start/End: Complemental strand, 51419460 - 51419356
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||||||| ||| |||||| || ||||||| |  || |||||||||||||||||||||| |||| || || ||||||||||||| ||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  659 tcttt 663  Q
    |||||    
T  51419360 tcttt 51419356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 557 - 624
Target Start/End: Complemental strand, 11095455 - 11095388
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    |||||| |||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 11095388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 564 - 663
Target Start/End: Complemental strand, 48587186 - 48587087
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctcttt 663  Q
    |||||||||| | |||||||||||||||||||||  |||||||| ||| |||||||||||| || | ||  |||| ||||||||||||||||||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 24700055 - 24699940
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| |||||| ||||||||||||| |||||||||||| ||||||||| || |||| ||  ||||||| | ||||  |||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  658 ctctttcttcttctct 673  Q
    ||||||| ||| ||||    
T  24699955 ctctttcctctcctct 24699940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 25395434 - 25395319
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    |||| ||||||||||||||| ||||| ||||| ||||| |  || | |||||||||||||||||||||||||  |||| |||||| |||||  ||| |||    
T  25395434 agagctatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacatttt 25395335  T
Q  658 ctctttcttcttctct 673  Q
    ||||||| ||||||||    
T  25395334 ctctttcatcttctct 25395319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 557 - 624
Target Start/End: Complemental strand, 33118953 - 33118886
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    ||||||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||| |||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgaca 33118886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 35536625 - 35536740
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| ||||| |||||||||||||  |||||||||||| |||||| ||||| |||| ||| ||||||   |||||| ||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  658 ctctttcttcttctct 673  Q
    ||||||| ||||||||    
T  35536725 ctctttcatcttctct 35536740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 629
Target Start/End: Complemental strand, 36331479 - 36331408
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    ||||||||||||||||||||||||||| ||||||| ||||  |||||| ||||||||||||||| |||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtgg 36331408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 558 - 673
Target Start/End: Complemental strand, 48375807 - 48375692
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||||||||| |||| ||||||||||||| |||||||||  |  | | ||| ||||||||||||| ||||| || |||||||||||||||| ||| |||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacatttt 48375708  T
Q  658 ctctttcttcttctct 673  Q
    ||||||| ||| ||||    
T  48375707 ctctttcctctcctct 48375692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 556 - 624
Target Start/End: Complemental strand, 36707527 - 36707459
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgaca 624  Q
    ||||||| |||||||||| | ||||||||||| |||||||||  |||||| ||||||||||||||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgaca 36707459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 558 - 673
Target Start/End: Original strand, 8956761 - 8956876
Alignment:
Q  558 agagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacacttt 657  Q
    ||||| |||||||||| ||| ||||| ||||||||||| |  |||||||||||| |||||| ||||| |||  ||| ||||||   |||||| ||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  658 ctctttcttcttctct 673  Q
    ||||||| ||||||||    
T  8956861 ctctttcatcttctct 8956876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 564 - 673
Target Start/End: Complemental strand, 25407243 - 25407133
Alignment:
Q  564 atgatacataaacacccttaggtggcaatacacctattgacacccacac-aaaaatctgacatgtggacatatggaccccgcacaagtacactttctctt 662  Q
    |||||||||| ||| || |||||||||||| |||  ||||||| ||||| |||||||||||| |||  |||||||| ||| |||||  ||||||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctt 25407144  T
Q  663 tcttcttctct 673  Q
    || ||| ||||    
T  25407143 tcatctcctct 25407133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 662
Target Start/End: Original strand, 35093583 - 35093688
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactt 656  Q
    |||||||| |||||||| ||| | ||||||| ||||||| |  |||||| |||| |||||||||||||||||| ||| || || ||  ||||| ||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  657 tctctt 662  Q
    ||||||    
T  35093683 tctctt 35093688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 41080709 - 41080821
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| |||||| | |||| |||||  ||||||||||| ||||||||||| |||||| ||| |||| ||| |||||| ||| ||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  41080807 tctttcatctcctct 41080821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 625
Target Start/End: Complemental strand, 1758560 - 1758490
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacaccta--ttgacacccacacaaaaatctgacat 625  Q
    |||||||||||||||||  || || ||||| ||||||||||    ||||||||||||||||||||||||||    
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacat 1758490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 556 - 629
Target Start/End: Original strand, 4190170 - 4190242
Alignment:
Q  556 aaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    |||||||  ||||||||  | ||||||| |||||||||||||| || ||||||||||||||  |||||||||||    
T  4190170 aaagagtggtgatacatgtatacccttatgtggcaatacacctctt-acacccacacaaaatcctgacatgtgg 4190242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 557 - 630
Target Start/End: Complemental strand, 35965876 - 35965803
Alignment:
Q  557 aagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtgga 630  Q
    |||||| |||||||||| ||| ||||| |||  |||||| |  |||||||||||| |||||||||||| |||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgga 35965803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 585 - 629
Target Start/End: Complemental strand, 9434290 - 9434247
Alignment:
Q  585 gtggcaatacacctattgacacccacacaaaaatctgacatgtgg 629  Q
    |||||||||||||| || |||||||||||||| ||||||||||||    
T  9434290 gtggcaatacacctctt-acacccacacaaaattctgacatgtgg 9434247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 572 - 673
Target Start/End: Original strand, 152511 - 152612
Alignment:
Q  572 taaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttct 671  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  152511 taaacacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttct 152610  T
Q  672 ct 673  Q
    ||    
T  152611 ct 152612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 554 - 663
Target Start/End: Complemental strand, 10214 - 10105
Alignment:
Q  554 aaaaagagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtaca 653  Q
    |||||||||||||||||||| ||||| ||||||||||||||| |  |||||| ||||| |||||||||||| || | ||  |||||| || ||||| |||    
T  10214 aaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T
Q  654 ctttctcttt 663  Q
    ||||||||||    
T  10114 ctttctcttt 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 602 - 675
Target Start/End: Original strand, 17097 - 17170
Alignment:
Q  602 gacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttctctttcttcttctctct 675  Q
    |||| ||||||||||||||||||||||| || |||||||||||||||| ||| |||||||||| ||||||||||    
T  17097 gacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctcttctctct 17170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 559 - 673
Target Start/End: Original strand, 4029 - 4143
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||||| |||| ||||||||||||| || |||||||||||||||||||||| || |  |  |||| |||||| ||| ||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  659 tctttcttcttctct 673  Q
    |||||  ||||||||    
T  4129 tcttttctcttctct 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 1029 - 915
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| | |||||||||||||||||  || ||| ||||||||||| |||||| || | ||  || | |||||||||| ||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  929 tctttcctctcctct 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 673
Target Start/End: Complemental strand, 1029 - 915
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    |||| |||||||||| ||| | |||||||||||||||||  || ||| ||||||||||| |||||| || | ||  || | |||||||||| ||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  659 tctttcttcttctct 673  Q
    |||||| ||| ||||    
T  929 tctttcctctcctct 915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 559 - 664
Target Start/End: Complemental strand, 8963 - 8858
Alignment:
Q  559 gagttatgatacataaacacccttaggtggcaatacacctattgacacccacacaaaaatctgacatgtggacatatggaccccgcacaagtacactttc 658  Q
    ||||||||||| ||| ||| ||||| ||| ||||||||   |||||| | |||||||||| |||||  | | ||  |||||||| |||||||||| ||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  659 tctttc 664  Q
    ||||||    
T  8863 tctttc 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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