View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11039_low_5 (Length: 598)

Name: NF11039_low_5
Description: NF11039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11039_low_5
NF11039_low_5
[»] chr8 (18 HSPs)
chr8 (18-591)||(37808080-37808654)
chr8 (403-456)||(45419446-45419499)
chr8 (403-454)||(30812836-30812887)
chr8 (416-462)||(1335550-1335596)
chr8 (409-463)||(30783053-30783107)
chr8 (403-456)||(490546-490599)
chr8 (403-456)||(1928605-1928658)
chr8 (403-456)||(29520860-29520913)
chr8 (412-456)||(39953282-39953326)
chr8 (422-477)||(32569707-32569762)
chr8 (410-456)||(30198284-30198330)
chr8 (422-456)||(42854022-42854056)
chr8 (403-456)||(2796764-2796817)
chr8 (411-456)||(12611716-12611761)
chr8 (403-464)||(39702165-39702226)
chr8 (403-456)||(45041334-45041387)
chr8 (404-456)||(16035745-16035797)
chr8 (419-455)||(16971791-16971827)
[»] chr1 (34 HSPs)
chr1 (531-578)||(48359459-48359506)
chr1 (403-456)||(39140726-39140779)
chr1 (403-454)||(17269009-17269060)
chr1 (403-454)||(52532636-52532687)
chr1 (403-477)||(28090691-28090765)
chr1 (403-456)||(4590550-4590603)
chr1 (403-456)||(7124352-7124405)
chr1 (403-456)||(37462894-37462947)
chr1 (403-456)||(41560440-41560493)
chr1 (403-456)||(48861393-48861446)
chr1 (409-456)||(18469100-18469147)
chr1 (409-456)||(34444573-34444620)
chr1 (403-454)||(37294128-37294179)
chr1 (409-456)||(37429917-37429964)
chr1 (403-454)||(38869093-38869144)
chr1 (418-464)||(43599015-43599061)
chr1 (403-464)||(2545109-2545170)
chr1 (403-456)||(2694437-2694490)
chr1 (403-456)||(8796420-8796473)
chr1 (415-452)||(10272479-10272516)
chr1 (403-456)||(14225854-14225907)
chr1 (403-456)||(15437146-15437199)
chr1 (403-456)||(21769729-21769782)
chr1 (403-456)||(22175356-22175409)
chr1 (403-456)||(28511819-28511872)
chr1 (403-456)||(44941794-44941847)
chr1 (403-456)||(50257781-50257834)
chr1 (412-456)||(26299288-26299332)
chr1 (403-451)||(28528566-28528614)
chr1 (403-443)||(39123399-39123439)
chr1 (412-456)||(43028826-43028870)
chr1 (416-456)||(43481816-43481856)
chr1 (412-452)||(50806887-50806927)
chr1 (404-456)||(52561607-52561659)
[»] chr2 (24 HSPs)
chr2 (531-578)||(43785354-43785401)
chr2 (403-456)||(28960229-28960282)
chr2 (403-454)||(3720435-3720486)
chr2 (409-454)||(12013167-12013212)
chr2 (412-456)||(624704-624748)
chr2 (404-444)||(9554100-9554140)
chr2 (412-456)||(12470915-12470959)
chr2 (409-456)||(9531618-9531665)
chr2 (421-456)||(12489820-12489855)
chr2 (402-456)||(13443926-13443980)
chr2 (391-456)||(33504422-33504488)
chr2 (403-477)||(42549834-42549908)
chr2 (403-456)||(12734911-12734964)
chr2 (403-456)||(29968629-29968682)
chr2 (403-452)||(36366847-36366896)
chr2 (403-456)||(37470151-37470204)
chr2 (411-456)||(43573148-43573193)
chr2 (403-456)||(43610677-43610730)
chr2 (403-456)||(44437739-44437792)
chr2 (403-456)||(45543091-45543144)
chr2 (403-455)||(9556388-9556440)
chr2 (412-456)||(12520080-12520124)
chr2 (412-456)||(39709219-39709263)
chr2 (412-456)||(42543455-42543499)
[»] chr4 (24 HSPs)
chr4 (403-477)||(44719358-44719432)
chr4 (410-456)||(45209223-45209269)
chr4 (403-456)||(8598959-8599012)
chr4 (403-456)||(25575035-25575088)
chr4 (403-464)||(31403044-31403105)
chr4 (403-456)||(35690482-35690535)
chr4 (403-456)||(37042682-37042735)
chr4 (410-478)||(28236400-28236468)
chr4 (409-456)||(15661890-15661937)
chr4 (409-456)||(21359243-21359290)
chr4 (403-454)||(29399015-29399066)
chr4 (403-454)||(36255542-36255593)
chr4 (405-456)||(44047388-44047439)
chr4 (421-456)||(49738568-49738603)
chr4 (422-456)||(7066517-7066551)
chr4 (391-456)||(29209193-29209259)
chr4 (412-454)||(35555670-35555712)
chr4 (403-456)||(6958256-6958309)
chr4 (403-456)||(17900691-17900744)
chr4 (403-456)||(26024868-26024921)
chr4 (403-456)||(37488302-37488355)
chr4 (415-456)||(50862854-50862895)
chr4 (403-456)||(55007957-55008010)
chr4 (403-463)||(40018200-40018260)
[»] chr7 (18 HSPs)
chr7 (403-456)||(17759484-17759537)
chr7 (403-456)||(1011257-1011310)
chr7 (403-456)||(2885740-2885793)
chr7 (412-456)||(34745967-34746011)
chr7 (421-456)||(6682582-6682617)
chr7 (421-456)||(19119442-19119477)
chr7 (403-450)||(25891099-25891146)
chr7 (409-456)||(28708598-28708645)
chr7 (421-456)||(47155190-47155225)
chr7 (403-456)||(4604758-4604811)
chr7 (411-456)||(5418293-5418338)
chr7 (403-456)||(28627951-28628004)
chr7 (403-456)||(37618156-37618209)
chr7 (403-456)||(40979946-40979999)
chr7 (411-456)||(42187660-42187705)
chr7 (403-456)||(47852298-47852351)
chr7 (420-456)||(39738463-39738499)
chr7 (412-456)||(48735919-48735963)
[»] chr5 (19 HSPs)
chr5 (403-456)||(15252762-15252815)
chr5 (403-456)||(30639734-30639787)
chr5 (409-464)||(7678694-7678749)
chr5 (403-456)||(14667982-14668035)
chr5 (403-456)||(28411887-28411940)
chr5 (409-456)||(14330186-14330233)
chr5 (409-456)||(27386557-27386604)
chr5 (409-456)||(41894290-41894337)
chr5 (391-456)||(12576878-12576944)
chr5 (422-456)||(28976877-28976911)
chr5 (403-456)||(418052-418105)
chr5 (403-456)||(683719-683772)
chr5 (403-452)||(3442893-3442942)
chr5 (403-456)||(11675741-11675794)
chr5 (403-456)||(20456984-20457037)
chr5 (403-456)||(27800039-27800092)
chr5 (403-456)||(32442143-32442196)
chr5 (403-456)||(38132547-38132600)
chr5 (51-79)||(40279882-40279910)
[»] chr3 (17 HSPs)
chr3 (403-456)||(24778627-24778680)
chr3 (403-456)||(15296118-15296171)
chr3 (403-471)||(40991642-40991710)
chr3 (410-456)||(17022690-17022736)
chr3 (422-456)||(20208228-20208262)
chr3 (403-453)||(46148239-46148289)
chr3 (422-456)||(47233614-47233648)
chr3 (422-456)||(51447735-51447769)
chr3 (403-456)||(19676099-19676152)
chr3 (403-456)||(24541350-24541403)
chr3 (403-456)||(29601103-29601156)
chr3 (403-456)||(31566179-31566232)
chr3 (403-456)||(48508446-48508499)
chr3 (403-456)||(50960655-50960708)
chr3 (412-456)||(31146919-31146963)
chr3 (422-454)||(34253690-34253722)
chr3 (412-456)||(41529981-41530025)
[»] chr6 (4 HSPs)
chr6 (403-477)||(34502-34576)
chr6 (402-444)||(18130844-18130886)
chr6 (403-456)||(12890786-12890839)
chr6 (403-456)||(28085587-28085640)


Alignment Details
Target: chr8 (Bit Score: 551; Significance: 0; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 18 - 591
Target Start/End: Complemental strand, 37808654 - 37808080
Alignment:
Q  18 gaaatttgatttgaatttgtagaact-agtgtttttcaagatttttcattttaatttcattaatattataattgctgagagccatttgattcttcttcag 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37808654 gaaatttgatttgaatttgtagaacttagtgtttttcaagatttttcattttaatttcattaatattataattgctgagagccatttgattcttcttcag 37808555  T
Q  117 cctatgagtgctctttttgtctgaatttgatgttgagattaatgtgatttttgaaatacaactggttttggatatgcctctgtttcattgttgtttattt 216  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37808554 tctatgagtgctctttttgtctgaatttgatgttgagattaatgtgatttttgaaatacaactggttttggatatgcctctgtttcattgttgtttattt 37808455  T
Q  217 ttccaatggaaatgagtattttcgtatgtagtttccatgaagtgagtgtgttagtctgcatgcttttgtgaagaacttcttgctgataagtctatttcat 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37808454 ttccaatggaaatgagtattttcgtatgtagtttccatgaagtgagtgtgttagtctgcatgcttttgtgaagaacttcttgctgataagtgtatttcat 37808355  T
Q  317 ttaagtgttggcaaatgaatctttagatcatgaaattaagtgtttataaaccatattttgtactgtcttttcataatatggtatctatagagcattatgg 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37808354 ttaagtgttggcaaatgaatctttagatcatgaaattaagtgtttataaaccatattttgtactgtcttttcataatatggtatctatagagcattatgg 37808255  T
Q  417 tgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgtcttttctcaagatacacagcaagtgtgctaacttattaa 516  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37808254 tgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgtcttttctcaagatacacagcaagtgtgctaacttattaa 37808155  T
Q  517 tctgtttgtcatattgagttaatttgagcttataggtagcttgttttctaagtgggtttttcttgatctctgctt 591  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  37808154 tctgtttgtcatattgagttaatttgagcttataggtagctcgttttctaagtgggtttttcttgatctttgctt 37808080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 45419446 - 45419499
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||||||||||    
T  45419446 atagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggata 45419499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 30812887 - 30812836
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| || |||||||| |||||||||||||||||||||||| |||||||||    
T  30812887 atagaacactatggtgtcgtttgattcatgtagccgaccccacttagtggga 30812836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 462
Target Start/End: Original strand, 1335550 - 1335596
Alignment:
Q  416 gtgtagtttgattcatgtagccgaccccatttagtgggatagaactt 462  Q
    ||||| ||||||||||||||||||||||| |||||||||||| ||||    
T  1335550 gtgtaatttgattcatgtagccgaccccacttagtgggataggactt 1335596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 463
Target Start/End: Complemental strand, 30783107 - 30783053
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttg 463  Q
    |||||||  |||||||||| ||||||||||||||||| |||||||||| ||||||    
T  30783107 cattatgaggtagtttgatccatgtagccgaccccatctagtgggataaaacttg 30783053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 490546 - 490599
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  490546 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 490599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 1928658 - 1928605
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  1928658 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 1928605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 29520860 - 29520913
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| ||||||||| ||||||||||||||||||    
T  29520860 atagaacattatggcgtaatttgatccatgtagcccaccccatttagtgggata 29520913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 39953326 - 39953282
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || |||||||||||||||||||||||| |||||||||||    
T  39953326 tatggagttgtttgattcatgtagccgaccccacttagtgggata 39953282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 477
Target Start/End: Complemental strand, 32569762 - 32569707
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgt 477  Q
    ||||||| |||||||||||||||||||||||||||  ||||||  ||||| |||||    
T  32569762 tttgatttatgtagccgaccccatttagtgggataagacttggttgttgttgttgt 32569707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 456
Target Start/End: Complemental strand, 30198330 - 30198284
Alignment:
Q  410 attatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||||||||||  |||| |||||||||| |||||||||||    
T  30198330 attatggtgtagtttgatctatgttgccgaccccacttagtgggata 30198284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Complemental strand, 42854056 - 42854022
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| ||||||||||||||||||||||||||||    
T  42854056 tttgatccatgtagccgaccccatttagtgggata 42854022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 2796764 - 2796817
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| ||| |||||||||||||| |||||||| |||||||||||    
T  2796764 atagaacagtatggcgtaatttgattcatgtagacgaccccacttagtgggata 2796817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 12611716 - 12611761
Alignment:
Q  411 ttatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||||||    
T  12611716 ttatggtgtcgtttgatccatgtagccgatcccaattagtgggata 12611761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 464
Target Start/End: Original strand, 39702165 - 39702226
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttgg 464  Q
    ||||| ||||||||| |  ||||||  |||||||||||| |||||||||||||| |||||||    
T  39702165 atagaacattatggtatcatttgatctatgtagccgaccacatttagtgggataaaacttgg 39702226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 45041387 - 45041334
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||| ||||||||| ||| |||||| |||||||| ||||||| |||||||||||    
T  45041387 atagcgcattatggcgtaatttgatccatgtagctgaccccacttagtgggata 45041334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 16035797 - 16035745
Alignment:
Q  404 tagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||| |||||||  ||| ||||||||||||||| ||||||| |||||||||||    
T  16035797 tagaacattatgacgtaatttgattcatgtagctgaccccacttagtgggata 16035745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 419 - 455
Target Start/End: Complemental strand, 16971827 - 16971791
Alignment:
Q  419 tagtttgattcatgtagccgaccccatttagtgggat 455  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  16971827 tagtttgatccatgtagccgacccaatttagtgggat 16971791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 9e-16; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 48359459 - 48359506
Alignment:
Q  531 tgagttaatttgagcttataggtagcttgttttctaagtgggtttttc 578  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  48359459 tgagttaatttgagcttatagatagcttgttttctaagtgggtttttc 48359506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 39140726 - 39140779
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  39140726 atagaacattatggcgtaatttgattcatgtagccgaccccacttagtgggata 39140779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 17269060 - 17269009
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||| ||| |||||| ||||||||||||||||||||||||||    
T  17269060 atagaacattatggcgtaatttgatccatgtagccgaccccatttagtggga 17269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 52532687 - 52532636
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||| ||| ||||||||||||||||||||||| |||||||||    
T  52532687 atagaacattatggcgtaatttgattcatgtagccgaccccacttagtggga 52532636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 28090765 - 28090691
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgt 477  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||  ||||||  ||||| |||||    
T  28090765 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgttgttgt 28090691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 4590603 - 4590550
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||| |||||| |||||||||||||||| |||||||||||    
T  4590603 atagaacaatatggtgtaatttgatccatgtagccgaccccacttagtgggata 4590550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 7124352 - 7124405
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||||||||| ||||||| |||||||| |||| || |||||||||||    
T  7124352 atagagcattatggtgtcgtttgatccatgtagctgacctcacttagtgggata 7124405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 37462947 - 37462894
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  37462947 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 37462894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 41560440 - 41560493
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  41560440 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 41560493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 48861446 - 48861393
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||  || ||||||||||||| |||||||||| |||||||||||    
T  48861446 atagagcattatgacgtcgtttgattcatgtcgccgaccccacttagtgggata 48861393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 18469147 - 18469100
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||| |||| ||||||||| |||||||| |||||||||||    
T  18469147 cattatggtgtaatttggttcatgtagacgaccccacttagtgggata 18469100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 34444573 - 34444620
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||| ||||||  ||||||||||||||| |||||||||||    
T  34444573 cattatggtgtaatttgatctatgtagccgaccccacttagtgggata 34444620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 37294179 - 37294128
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||| ||| |||||| |||||||| |||||||||||||||||    
T  37294179 atagaacattatggcgtaatttgatccatgtagctgaccccatttagtggga 37294128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 37429964 - 37429917
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||| ||||||| |||||| |||||||||||||||||||| |||||||    
T  37429964 cattgtggtgtaatttgatccatgtagccgaccccatttaatgggata 37429917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Original strand, 38869093 - 38869144
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||| || ||||||| |||||||||||||||| |||||||||    
T  38869093 atagaacattatggcgtcgtttgatccatgtagccgaccccacttagtggga 38869144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 43599061 - 43599015
Alignment:
Q  418 gtagtttgattcatgtagccgaccccatttagtgggatagaacttgg 464  Q
    ||||||||||||||||||| ||||||| ||| ||||||| |||||||    
T  43599061 gtagtttgattcatgtagctgaccccacttactgggataaaacttgg 43599015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 2545170 - 2545109
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttgg 464  Q
    ||||| ||||||||||| |||||||  || |||||||| ||| ||||||||||||| |||||    
T  2545170 atagaacattatggtgtcgtttgatcaatttagccgacgccaattagtgggatagaccttgg 2545109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 2694490 - 2694437
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||||| ||||||||| ||| |||| ||||||| |||||||||||    
T  2694490 atagaacattatggtatagtttgatccatttagcagaccccacttagtgggata 2694437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 8796420 - 8796473
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| ||| || |||||||||||||||| |||||||||||    
T  8796420 atagaacattatggcgtaatttaatccatgtagccgaccccacttagtgggata 8796473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 452
Target Start/End: Original strand, 10272479 - 10272516
Alignment:
Q  415 ggtgtagtttgattcatgtagccgaccccatttagtgg 452  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  10272479 ggtgtcgtttgattcatgtagccgaccccacttagtgg 10272516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 14225907 - 14225854
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || |||||||| ||||||| |||||||||| ||||| |||||||||||    
T  14225907 atagaacagtatggtgtcgtttgatccatgtagccggccccacttagtgggata 14225854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 15437199 - 15437146
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || |||||||| ||||||||||||||||| ||||||  ||||||||||    
T  15437199 atagaacactatggtgtcgtttgattcatgtagccaaccccacatagtgggata 15437146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 21769782 - 21769729
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||| ||||    
T  21769782 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgtgata 21769729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 22175356 - 22175409
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||  | |||||| |||||||||||||||| |||||||||||    
T  22175356 atagaacattatggtagaatttgatccatgtagccgaccccacttagtgggata 22175409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 28511872 - 28511819
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| ||||||  ||||||||||||||| |||||||||||    
T  28511872 atagaacattatggcgtaatttgatcaatgtagccgaccccacttagtgggata 28511819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 44941847 - 44941794
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  44941847 atagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 44941794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 50257781 - 50257834
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| |||||| ||||||||| |||||| |||||| ||||    
T  50257781 atagaacattatggtgtaatttgatccatgtagccaaccccacttagtgagata 50257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 26299288 - 26299332
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  26299288 tatggcgtaatttgatccatgtagccgaccccacttagtgggata 26299332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 451
Target Start/End: Original strand, 28528566 - 28528614
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtg 451  Q
    ||||| || ||||| || |||||||||||||||||||||||| ||||||    
T  28528566 atagaccactatggcgtcgtttgattcatgtagccgaccccacttagtg 28528614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 39123439 - 39123399
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgacccc 443  Q
    ||||| |||||||||||| |||||| |||||||||||||||    
T  39123439 atagaacattatggtgtaatttgatccatgtagccgacccc 39123399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 43028870 - 43028826
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||||||||||||||  |||||||| |||||||||||    
T  43028870 tatggtgtcgtttgattcatgtaagcgaccccacttagtgggata 43028826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 43481856 - 43481816
Alignment:
Q  416 gtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||| |||||||||||||||| |||||||||||    
T  43481856 gtgtaatttgatccatgtagccgaccccacttagtgggata 43481816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 452
Target Start/End: Original strand, 50806887 - 50806927
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgg 452  Q
    ||||| || |||||||||||||| |||||||||||||||||    
T  50806887 tatggcgttgtttgattcatgtaaccgaccccatttagtgg 50806927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 456
Target Start/End: Complemental strand, 52561659 - 52561607
Alignment:
Q  404 tagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||| |||||||| | | |||||| |||||||||||||||| |||||||||||    
T  52561659 tagaacattatggcgaaatttgatccatgtagccgaccccacttagtgggata 52561607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 531 - 578
Target Start/End: Original strand, 43785354 - 43785401
Alignment:
Q  531 tgagttaatttgagcttataggtagcttgttttctaagtgggtttttc 578  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  43785354 tgagttaatttgagcatatagatagcttgttttctaagtgggtttttc 43785401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 28960282 - 28960229
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| |||||||| ||||||||||||||| |||| |||||||||||||||    
T  28960282 atagagcactatggtgtcgtttgattcatgtagtcgactccatttagtgggata 28960229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 3720486 - 3720435
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||||||||    
T  3720486 atagaacattatggtgtaatttgatccatgtagccgaccccacttagtggga 3720435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 409 - 454
Target Start/End: Original strand, 12013167 - 12013212
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    |||||||||||| ||||||||||||  |||||||||||||||||||    
T  12013167 cattatggtgtaatttgattcatgtcaccgaccccatttagtggga 12013212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 624748 - 624704
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| |||||||||||||||||||||||||  |||||||||||    
T  624748 tatggtatagtttgattcatgtagccgaccccgcttagtgggata 624704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 444
Target Start/End: Complemental strand, 9554140 - 9554100
Alignment:
Q  404 tagagcattatggtgtagtttgattcatgtagccgacccca 444  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  9554140 tagaacattatggtgtagtttaattcatgtagccgacccca 9554100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 12470959 - 12470915
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| ||||||||||||||||||||||||||||||    
T  12470959 tatggcgtcgtttgcttcatgtagccgaccccatttagtgggata 12470915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 9531665 - 9531618
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  9531665 cattatggcgtaatttgatccatgtagccgaccccacttagtgggata 9531618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Complemental strand, 12489855 - 12489820
Alignment:
Q  421 gtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||||||||||||| |||||||||||    
T  12489855 gtttgattcatgtagccgaccccacttagtgggata 12489820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 456
Target Start/End: Complemental strand, 13443980 - 13443926
Alignment:
Q  402 tatagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| |||||||| ||  ||||||  |||||||||||||||||||||||||||    
T  13443980 tatagaacattatggcgtcatttgatcgatgtagccgaccccatttagtgggata 13443926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 33504422 - 33504488
Alignment:
Q  391 aatatggtatct-atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||| | ||||| |||||||| ||| |||||| ||| |||||||||||| |||||||||||    
T  33504422 aatatggtatatgatagaacattatggcgtaatttgatccatctagccgaccccacttagtgggata 33504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 42549908 - 42549834
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgt 477  Q
    ||||| ||| |||| ||| |||||||||||||||| |||||| ||||||||||| | |||||  ||||| |||||    
T  42549908 atagaacatcatggcgtaatttgattcatgtagccaaccccacttagtgggataaagcttggttgttgttgttgt 42549834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 12734911 - 12734964
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||| |||||| ||||||| |||||||| |||||||||||    
T  12734911 atagaacactatggtgtaatttgatccatgtagtcgaccccacttagtgggata 12734964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 29968682 - 29968629
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| || |||||||||||||||||||| ||| |||||||||||    
T  29968682 atagaacactatggcgttgtttgattcatgtagccgactccacttagtgggata 29968629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Original strand, 36366847 - 36366896
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgg 452  Q
    ||||| |||||||||||| |||||| |||||| || ||||||||||||||    
T  36366847 atagaacattatggtgtaatttgatccatgtatccaaccccatttagtgg 36366896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 37470204 - 37470151
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||||||||||||||| ||||||||  | |||| |||||||||||    
T  37470204 atagaacattatggtgtagtttgatccatgtagctaatcccacttagtgggata 37470151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 43573193 - 43573148
Alignment:
Q  411 ttatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| ||| |||||| |||||||||||||||| |||||||||||    
T  43573193 ttatggcgtaatttgatccatgtagccgaccccacttagtgggata 43573148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 43610730 - 43610677
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||| |||||| || |||| || ||||||||||||||||||| ||||||||    
T  43610730 atagagctttatggcgtcgtttaatccatgtagccgaccccatttggtgggata 43610677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 44437792 - 44437739
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| || |||| ||||||||||||||||||| |||||||||||    
T  44437792 atagaacactatggcgttgtttaattcatgtagccgaccccacttagtgggata 44437739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 45543144 - 45543091
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| ||||||  ||||||||||||||| |||||||||||    
T  45543144 atagaacattatggcgtactttgatctatgtagccgaccccacttagtgggata 45543091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 455
Target Start/End: Complemental strand, 9556440 - 9556388
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggat 455  Q
    ||||| ||||| |||||| |||||| |||||||||||| ||| ||||||||||    
T  9556440 atagaacattagggtgtaatttgatacatgtagccgactccacttagtgggat 9556388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 12520124 - 12520080
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  12520124 tatggcgtaatttgatccatgtagccgaccccacttagtgggata 12520080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 39709263 - 39709219
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  39709263 tatggcgtaatttgatccatgtagccgaccccacttagtgggata 39709219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 42543455 - 42543499
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || |||||||||||||||||| ||||| |||||||||||    
T  42543455 tatggcgttgtttgattcatgtagccggccccacttagtgggata 42543499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 44719432 - 44719358
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgt 477  Q
    ||||||||||||||||| ||||||| |||||||||||||| | |||||||||||  ||||||  ||||| |||||    
T  44719432 atagagcattatggtgtcgtttgatccatgtagccgaccctacttagtgggataagacttggttgttgttgttgt 44719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 410 - 456
Target Start/End: Complemental strand, 45209269 - 45209223
Alignment:
Q  410 attatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||||    
T  45209269 attatggcgtagtttgatccatgtagccgaccccacttagtgggata 45209223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 8599012 - 8598959
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| || |||||||||||||||||||| ||| |||||||||||    
T  8599012 atagaacattatggcgtcgtttgattcatgtagccgacgccacttagtgggata 8598959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 25575035 - 25575088
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||| ||||||| |||||| |||||||| |||||||||||||||||||    
T  25575035 atagaacattgtggtgtaatttgatccatgtagcagaccccatttagtgggata 25575088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 464
Target Start/End: Complemental strand, 31403105 - 31403044
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttgg 464  Q
    ||||||||||||||||| | ||||| ||||||| |||||||| ||||| ||||| |||||||    
T  31403105 atagagcattatggtgttgcttgatccatgtagacgaccccacttagtaggataaaacttgg 31403044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 35690482 - 35690535
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  35690482 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtgggata 35690535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 37042735 - 37042682
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||||||| ||||||| |||||||||||||| | |||||||||||    
T  37042735 atagaacattatggtgtcgtttgatccatgtagccgacccgacttagtgggata 37042682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 478
Target Start/End: Original strand, 28236400 - 28236468
Alignment:
Q  410 attatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgtc 478  Q
    ||||||||||| ||||||  ||||||||||||||| |||||||||||  ||||||  ||||| ||||||    
T  28236400 attatggtgtaatttgatctatgtagccgaccccacttagtgggataagacttggttgttgttgttgtc 28236468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 15661937 - 15661890
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  15661937 cattatggcgtaatttgatccatgtagccgaccccacttagtgggata 15661890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 21359290 - 21359243
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||| ||||||||||| ||||||||||| |||||||||||    
T  21359290 cattatggcgtaatttgattcatgcagccgaccccacttagtgggata 21359243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Original strand, 29399015 - 29399066
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||| ||| ||||||||||||||| ||||||| |||||||||    
T  29399015 atagaacattatggcgtaatttgattcatgtagctgaccccacttagtggga 29399066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 36255593 - 36255542
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| |||||||||||| |||||| ||||| |||||||||| |||||||||    
T  36255593 atagaacattatggtgtaatttgatccatgtggccgaccccacttagtggga 36255542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 456
Target Start/End: Complemental strand, 44047439 - 44047388
Alignment:
Q  405 agagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||| ||||||  ||||||||||||||||| |||||| |||||||||||    
T  44047439 agagcataatggtgacgtttgattcatgtagccaaccccacttagtgggata 44047388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Complemental strand, 49738603 - 49738568
Alignment:
Q  421 gtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||| ||||||||||||||||||||||||||||    
T  49738603 gtttgatccatgtagccgaccccatttagtgggata 49738568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Complemental strand, 7066551 - 7066517
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||||||| |||||||||||||||||||    
T  7066551 tttgattcatgtagctgaccccatttagtgggata 7066517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 29209259 - 29209193
Alignment:
Q  391 aatatggtatct-atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||| | |||||||||||||| || |||||||  ||||||||||||||| ||| |||||||    
T  29209259 aatatggtatatgatagagcattatggcgttgtttgatcaatgtagccgaccccacttaatgggata 29209193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 412 - 454
Target Start/End: Complemental strand, 35555712 - 35555670
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtggga 454  Q
    ||||| || |||||||||||||||||||| |||||||||||||    
T  35555712 tatggcgtcgtttgattcatgtagccgactccatttagtggga 35555670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 6958309 - 6958256
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| || |||||||||||||||||||||| | |||||||||||    
T  6958309 atagaacactatggcgtcgtttgattcatgtagccgaccctacttagtgggata 6958256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 17900691 - 17900744
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||||| || ||||||||||| |||| ||||||| |||||||||||    
T  17900691 atagagcactatggcgttgtttgattcatttagctgaccccacttagtgggata 17900744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 26024921 - 26024868
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| ||| || ||||||||||||| || |||||||||||    
T  26024921 atagaacattatggtgtaattttatccatgtagccgacctcacttagtgggata 26024868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 37488302 - 37488355
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||| ||| |||||| |||||||||  ||||| |||||||||||    
T  37488302 atagagcattatggcgtaatttgatccatgtagccagccccacttagtgggata 37488355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 50862854 - 50862895
Alignment:
Q  415 ggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| |||||| |||||||||||||||| |||||||||||    
T  50862854 ggtgtaatttgatccatgtagccgaccccacttagtgggata 50862895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 55007957 - 55008010
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||  ||| |||||| |||||||||||||||| |||||||||||    
T  55007957 atagatcattatgacgtaatttgatccatgtagccgaccccacttagtgggata 55008010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 403 - 463
Target Start/End: Complemental strand, 40018260 - 40018200
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttg 463  Q
    ||||| ||||| || || ||||||| |||||||||||||||| ||||||| ||| ||||||    
T  40018260 atagaacattacggcgtcgtttgatccatgtagccgaccccacttagtggaataaaacttg 40018200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 17759484 - 17759537
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || |||||||| |||||||||||||||||||||||| |||||||||||    
T  17759484 atagaacactatggtgttgtttgattcatgtagccgaccccacttagtgggata 17759537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 1011257 - 1011310
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| ||||||  ||||||||||||||| |||||||||||    
T  1011257 atagaacattatggtgtaatttgatctatgtagccgaccccacttagtgggata 1011310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 2885793 - 2885740
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||| |||||| |||||||||||||||| |||||||||||    
T  2885793 atagaacactatggtgtaatttgatccatgtagccgaccccacttagtgggata 2885740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 34745967 - 34746011
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || |||||||||||||||||||||||| |||||||||||    
T  34745967 tatggcgttgtttgattcatgtagccgaccccacttagtgggata 34746011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Original strand, 6682582 - 6682617
Alignment:
Q  421 gtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||||||||||||| |||||||||||    
T  6682582 gtttgattcatgtagccgaccccacttagtgggata 6682617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Complemental strand, 19119477 - 19119442
Alignment:
Q  421 gtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||||||||||||| |||||||||||    
T  19119477 gtttgattcatgtagccgaccccacttagtgggata 19119442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 450
Target Start/End: Original strand, 25891099 - 25891146
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagt 450  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||||    
T  25891099 atagaacattatggtgtaatttgatccatgtagccgaccccacttagt 25891146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 28708598 - 28708645
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  28708598 cattatggcgtaatttgatccatgtagccgaccccacttagtgggata 28708645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 456
Target Start/End: Complemental strand, 47155225 - 47155190
Alignment:
Q  421 gtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||||||||||||| |||||||||||    
T  47155225 gtttgattcatgtagccgaccccacttagtgggata 47155190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 4604758 - 4604811
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| ||||||||| |||||| |||||||||||    
T  4604758 atagaacattatggcgtactttgatccatgtagccaaccccacttagtgggata 4604811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 5418293 - 5418338
Alignment:
Q  411 ttatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| ||| |||||| ||||||| ||||||||||||||||||||    
T  5418293 ttatggcgtaatttgatccatgtagtcgaccccatttagtgggata 5418338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 28628004 - 28627951
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||| ||| |||||||||||    
T  28628004 atagaacattatggcgtaatttgatccatgtagccgactccacttagtgggata 28627951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 37618156 - 37618209
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||  |||||| |||||||||||||||| |||||||||||    
T  37618156 atagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggata 37618209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 40979999 - 40979946
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  40979999 atagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 40979946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 456
Target Start/End: Original strand, 42187660 - 42187705
Alignment:
Q  411 ttatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| ||| |||||| |||||||||||||||| |||||||||||    
T  42187660 ttatggcgtaatttgatccatgtagccgaccccacttagtgggata 42187705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 47852298 - 47852351
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| |||| ||||||    
T  47852298 atagaacattatggcgtaatttgatccatgtagccgaccccacttagggggata 47852351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 456
Target Start/End: Complemental strand, 39738499 - 39738463
Alignment:
Q  420 agtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||||||| |||||| |||||||||||    
T  39738499 agtttgattcatgtagccaaccccacttagtgggata 39738463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 48735963 - 48735919
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||||||||||| |||||| |||||||||||    
T  48735963 tatggcgtcgtttgattcatgtagccaaccccacttagtgggata 48735919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000004; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 15252815 - 15252762
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||    
T  15252815 atagaacattatgatgtagtttaattcatgtagccgaccccacttagtgggata 15252762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 30639787 - 30639734
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||| ||||||| |||||| ||||||||||||||||||||||||||||    
T  30639787 atagaacattgtggtgtaatttgatccatgtagccgaccccatttagtgggata 30639734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 7678694 - 7678749
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttgg 464  Q
    |||||||  |||||||||| |||||||||||||||| ||||||||||| |||||||    
T  7678694 cattatgaggtagtttgatccatgtagccgaccccacttagtgggataaaacttgg 7678749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 14667982 - 14668035
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  14667982 atagaacattatggtgtaatttgatccatgtaaccgaccccacttagtgggata 14668035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 28411887 - 28411940
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| || |||||||||||||||||||||||| |||||||||||    
T  28411887 atagaacactatggcgttgtttgattcatgtagccgaccccacttagtgggata 28411940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Complemental strand, 14330233 - 14330186
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| ||||| |||||||||||||||||||||||  ||||||||||    
T  14330233 cattattgtgtaatttgattcatgtagccgaccccacatagtgggata 14330186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 27386557 - 27386604
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||| ||| |||||| |||||||||||||||| |||||||||||    
T  27386557 cattatggcgtaatttgatccatgtagccgaccccacttagtgggata 27386604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 456
Target Start/End: Original strand, 41894290 - 41894337
Alignment:
Q  409 cattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||| |||||| ||||||||| |||||| |||||||||||    
T  41894290 cattatggtgtaatttgatccatgtagccaaccccacttagtgggata 41894337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 456
Target Start/End: Complemental strand, 12576944 - 12576878
Alignment:
Q  391 aatatggtatct-atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||| | ||||| |||||||||||  ||| || |||||||||||||||| |||||||||||    
T  12576944 aatatggtatatgatagaccattatggtgtcattttatacatgtagccgaccccaattagtgggata 12576878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Complemental strand, 28976911 - 28976877
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||||||||||||||| |||||||||||    
T  28976911 tttgattcatgtagccgaccccacttagtgggata 28976877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 418105 - 418052
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| || ||||||||    
T  418105 atagaacattatggcgtaatttgatccatgtagccgaccccacttggtgggata 418052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 683772 - 683719
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||| ||||||||||| ||||||||| |||||| |||| ||||||    
T  683772 atagaacattatgttgtagtttgatccatgtagccaaccccacttagcgggata 683719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 452
Target Start/End: Complemental strand, 3442942 - 3442893
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgg 452  Q
    ||||| || ||||| || |||||||||||||||||||||||| |||||||    
T  3442942 atagaacactatggcgtcgtttgattcatgtagccgaccccacttagtgg 3442893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 11675741 - 11675794
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||||||| || |||||||||||||||| ||||| |||||    
T  11675741 atagaacattatggcgtagtttaatccatgtagccgaccccacttagttggata 11675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 20456984 - 20457037
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||  |||||| |||||||||||||||| |||||||||||    
T  20456984 atagaacattatggcgtcatttgatccatgtagccgaccccacttagtgggata 20457037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 27800039 - 27800092
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||||| || |||||| ||||||||| |||||| |||||||||||    
T  27800039 atagaacattatggtataatttgatacatgtagccaaccccacttagtgggata 27800092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 32442196 - 32442143
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||||||||| ||| |||||||||||    
T  32442196 atagaacattatggcgtaatttgatccatgtagccgactccacttagtgggata 32442143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 38132547 - 38132600
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| ||||| |||||||||| |||||||||||    
T  38132547 atagaacattatggcgtaatttgatccatgtggccgaccccacttagtgggata 38132600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 40279882 - 40279910
Alignment:
Q  51 ttcaagatttttcattttaatttcattaa 79  Q
    |||||||||||||||||||||||||||||    
T  40279882 ttcaagatttttcattttaatttcattaa 40279910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 24778680 - 24778627
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| |||||| |||||||||||||||| |||||||||||    
T  24778680 atagaacattatggtgtaatttgatccatgtagccgaccccacttagtgggata 24778627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 15296118 - 15296171
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| |||||| ||||| |||||||||| |||||||||||    
T  15296118 atagaacattatggtgtaatttgatccatgtggccgaccccacttagtgggata 15296171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 471
Target Start/End: Original strand, 40991642 - 40991710
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgt 471  Q
    ||||| |||||||||||| |||||| |||||||| ||||||| |||||| ||||  ||||||| |||||    
T  40991642 atagaacattatggtgtaatttgatccatgtagctgaccccacttagtgagataagacttggctgttgt 40991710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 410 - 456
Target Start/End: Complemental strand, 17022736 - 17022690
Alignment:
Q  410 attatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||  ||| |||||||||||||||| ||||||||||||||    
T  17022736 attatggtgtcatttaattcatgtagccgacctcatttagtgggata 17022690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Original strand, 20208228 - 20208262
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||| ||||||||||||||||||||||||||||    
T  20208228 tttgatccatgtagccgaccccatttagtgggata 20208262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 453
Target Start/End: Original strand, 46148239 - 46148289
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtggg 453  Q
    ||||| |||||||| ||| |||||| |||||||||||||||| ||||||||    
T  46148239 atagaacattatggcgtaatttgatccatgtagccgaccccacttagtggg 46148289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Complemental strand, 47233648 - 47233614
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||||||||||||||| |||||||||||    
T  47233648 tttgattcatgtagccgaccccagttagtgggata 47233614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 422 - 456
Target Start/End: Complemental strand, 51447769 - 51447735
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||||||||||| |||||||||||||||||    
T  51447769 tttgattcatgtagccggccccatttagtgggata 51447735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 19676152 - 19676099
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    |||||||||||||| ||  |||||| |||||||| ||||||| |||||||||||    
T  19676152 atagagcattatggcgtgatttgatccatgtagctgaccccacttagtgggata 19676099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 24541403 - 24541350
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||| ||| |||||| |||||| ||||||||| |||||||||||    
T  24541403 atagaacattatggcgtaatttgatccatgtacccgaccccacttagtgggata 24541350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 29601103 - 29601156
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||||||| |||| |||||| |||||||| ||||||| |||||||||||    
T  29601103 atagaacattatgatgtaatttgatccatgtagctgaccccacttagtgggata 29601156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 31566232 - 31566179
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||  |||||| |||||||||||||||| |||||||||||    
T  31566232 atagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggata 31566179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 48508446 - 48508499
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  48508446 atagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 48508499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Complemental strand, 50960708 - 50960655
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| |||||||||||| |||||| ||| ||||| |||||| |||||||||||    
T  50960708 atagaccattatggtgtaatttgatccatttagccaaccccacttagtgggata 50960655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 31146919 - 31146963
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||||||| |||||| |||||||||||| ||| |||||||||||    
T  31146919 tatggtgtaatttgatccatgtagccgactccacttagtgggata 31146963  T

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Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 454
Target Start/End: Original strand, 34253690 - 34253722
Alignment:
Q  422 tttgattcatgtagccgaccccatttagtggga 454  Q
    |||||| ||||||||||||||||||||||||||    
T  34253690 tttgatccatgtagccgaccccatttagtggga 34253722  T

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Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 41529981 - 41530025
Alignment:
Q  412 tatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  41529981 tatggcgtaatttgatccatgtagccgaccccacttagtgggata 41530025  T

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Target: chr6 (Bit Score: 31; Significance: 0.00000005; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 403 - 477
Target Start/End: Complemental strand, 34576 - 34502
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggatagaacttggccgttgtcgttgt 477  Q
    ||||| |||||||| ||| |||||| |||||||| ||||||| |||||||||||  ||||||  ||||| |||||    
T  34576 atagaacattatggcgtaatttgatccatgtagctgaccccacttagtgggataagacttggttgttgttgttgt 34502  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 444
Target Start/End: Complemental strand, 18130886 - 18130844
Alignment:
Q  402 tatagagcattatggtgtagtttgattcatgtagccgacccca 444  Q
    |||||| |||||||||||| |||||| ||||||||||||||||    
T  18130886 tatagaacattatggtgtaatttgatccatgtagccgacccca 18130844  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 12890786 - 12890839
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||| ||| |||||| |||||||||||||||| |||||||||||    
T  12890786 atagaacactatggcgtaatttgatccatgtagccgaccccacttagtgggata 12890839  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 456
Target Start/End: Original strand, 28085587 - 28085640
Alignment:
Q  403 atagagcattatggtgtagtttgattcatgtagccgaccccatttagtgggata 456  Q
    ||||| || ||||||||  |||||| |||||||||||||||| |||||||||||    
T  28085587 atagaacactatggtgtcatttgatccatgtagccgaccccacttagtgggata 28085640  T

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