View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11039_low_8 (Length: 463)

Name: NF11039_low_8
Description: NF11039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11039_low_8
NF11039_low_8
[»] chr1 (26 HSPs)
chr1 (1-451)||(4229889-4230340)
chr1 (1-199)||(4361672-4361872)
chr1 (1-224)||(27901899-27902123)
chr1 (1-224)||(2603514-2603746)
chr1 (4-203)||(21382078-21382278)
chr1 (1-193)||(21168375-21168566)
chr1 (1-191)||(23511525-23511714)
chr1 (1-160)||(50826323-50826482)
chr1 (1-111)||(21137648-21137759)
chr1 (1-111)||(29305211-29305323)
chr1 (1-75)||(27131736-27131810)
chr1 (1-108)||(21310725-21310834)
chr1 (1-108)||(22684669-22684778)
chr1 (1-112)||(31845689-31845802)
chr1 (1-112)||(1528680-1528793)
chr1 (5-105)||(21550522-21550622)
chr1 (1-112)||(22809094-22809207)
chr1 (1-108)||(21076556-21076664)
chr1 (329-400)||(27901732-27901803)
chr1 (101-191)||(27130166-27130256)
chr1 (4-104)||(16406809-16406910)
chr1 (3-110)||(27561892-27562001)
chr1 (3-105)||(22086398-22086502)
chr1 (348-403)||(50826085-50826141)
chr1 (329-403)||(4361994-4362068)
chr1 (29-74)||(18530577-18530622)
[»] chr8 (19 HSPs)
chr8 (1-380)||(15337037-15337416)
chr8 (1-380)||(15426102-15426481)
chr8 (1-380)||(15517406-15517785)
chr8 (1-224)||(22698131-22698356)
chr8 (1-193)||(18735283-18735474)
chr8 (1-111)||(41438877-41438988)
chr8 (4-105)||(15911712-15911814)
chr8 (304-385)||(32116439-32116519)
chr8 (1-111)||(22352045-22352157)
chr8 (1-111)||(17426128-17426240)
chr8 (1-111)||(20193186-20193298)
chr8 (1-111)||(29708199-29708310)
chr8 (1-112)||(25389014-25389127)
chr8 (349-403)||(22698471-22698525)
chr8 (1-119)||(27818173-27818294)
chr8 (1-108)||(22064583-22064692)
chr8 (1-111)||(16667986-16668098)
chr8 (360-403)||(18735078-18735121)
chr8 (7-83)||(22698768-22698843)
[»] chr2 (36 HSPs)
chr2 (1-402)||(37130105-37130506)
chr2 (1-402)||(28567752-28568148)
chr2 (1-402)||(23870552-23870950)
chr2 (1-402)||(22707874-22708273)
chr2 (7-403)||(21256506-21256901)
chr2 (1-189)||(23815024-23815215)
chr2 (3-224)||(34827659-34827882)
chr2 (1-223)||(23803394-23803622)
chr2 (1-191)||(16664712-16664904)
chr2 (1-191)||(22880857-22881048)
chr2 (1-129)||(22593716-22593845)
chr2 (1-111)||(31817908-31818019)
chr2 (1-119)||(10480432-10480552)
chr2 (1-74)||(20524168-20524241)
chr2 (330-402)||(23803720-23803792)
chr2 (4-75)||(21905007-21905078)
chr2 (5-105)||(30051939-30052039)
chr2 (5-105)||(30142983-30143083)
chr2 (1-108)||(39227482-39227591)
chr2 (301-403)||(23815319-23815420)
chr2 (1-106)||(22648571-22648678)
chr2 (1-106)||(23190283-23190390)
chr2 (1-106)||(23611538-23611645)
chr2 (1-63)||(25349307-25349369)
chr2 (4-96)||(23769418-23769511)
chr2 (1-112)||(24896625-24896738)
chr2 (329-402)||(34827975-34828048)
chr2 (40-111)||(24967522-24967594)
chr2 (1-106)||(22633822-22633929)
chr2 (1-106)||(23203899-23204006)
chr2 (1-106)||(23615143-23615250)
chr2 (29-83)||(30089977-30090031)
chr2 (29-83)||(30126582-30126636)
chr2 (1-37)||(23829872-23829908)
chr2 (5-105)||(20281185-20281285)
chr2 (5-74)||(23995697-23995765)
[»] chr3 (20 HSPs)
chr3 (3-405)||(43135615-43136016)
chr3 (1-402)||(132482-132875)
chr3 (1-111)||(10139754-10139866)
chr3 (32-151)||(22444887-22445011)
chr3 (1-111)||(7341490-7341602)
chr3 (1-111)||(7396236-7396348)
chr3 (1-111)||(10171121-10171233)
chr3 (1-111)||(14683177-14683289)
chr3 (1-111)||(12844600-12844711)
chr3 (1-108)||(12491913-12492022)
chr3 (1-111)||(13299493-13299605)
chr3 (1-111)||(13310151-13310263)
chr3 (1-111)||(10778975-10779087)
chr3 (1-111)||(11887252-11887364)
chr3 (1-108)||(13023870-13023978)
chr3 (29-105)||(55002422-55002498)
chr3 (39-108)||(12021543-12021613)
chr3 (1-111)||(10792493-10792605)
chr3 (348-402)||(22444638-22444692)
chr3 (5-105)||(14133303-14133402)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-402)||(12025-12425)
[»] scaffold0190 (1 HSPs)
scaffold0190 (1-403)||(7120-7523)
[»] scaffold0480 (1 HSPs)
scaffold0480 (3-404)||(3411-3794)
[»] chr5 (13 HSPs)
chr5 (1-399)||(40932585-40932983)
chr5 (1-224)||(10624181-10624409)
chr5 (1-224)||(18156023-18156248)
chr5 (1-192)||(20024483-20024673)
chr5 (1-191)||(16832018-16832213)
chr5 (1-112)||(21530296-21530409)
chr5 (329-403)||(10624010-10624084)
chr5 (1-112)||(26274125-26274238)
chr5 (1-112)||(21504629-21504742)
chr5 (1-111)||(21982641-21982753)
chr5 (329-403)||(18155852-18155926)
chr5 (1-112)||(20506347-20506460)
chr5 (29-75)||(19212406-19212452)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-403)||(1436-1836)
[»] chr7 (26 HSPs)
chr7 (1-402)||(40342884-40343274)
chr7 (1-224)||(10827827-10828053)
chr7 (1-224)||(11021619-11021845)
chr7 (97-402)||(13346726-13347029)
chr7 (1-207)||(24876397-24876605)
chr7 (87-224)||(10864047-10864184)
chr7 (1-187)||(18752572-18752753)
chr7 (5-105)||(41239259-41239358)
chr7 (329-403)||(24876718-24876792)
chr7 (1-108)||(11989427-11989536)
chr7 (1-111)||(14035899-14036011)
chr7 (1-111)||(14345929-14346041)
chr7 (1-111)||(44277698-44277810)
chr7 (329-402)||(10828149-10828222)
chr7 (329-402)||(11021941-11022014)
chr7 (1-111)||(14323736-14323848)
chr7 (1-106)||(18174893-18175000)
chr7 (1-112)||(1978250-1978363)
chr7 (329-402)||(10863879-10863952)
chr7 (1-112)||(15758551-15758664)
chr7 (1-111)||(18115255-18115366)
chr7 (1-111)||(18141823-18141934)
chr7 (5-83)||(10478226-10478303)
chr7 (12-98)||(16713315-16713400)
chr7 (12-98)||(17687551-17687636)
chr7 (1-74)||(18160123-18160197)
[»] chr6 (15 HSPs)
chr6 (1-351)||(18258137-18258488)
chr6 (1-404)||(11793802-11794205)
chr6 (1-208)||(16597278-16597486)
chr6 (1-191)||(26460618-26460809)
chr6 (1-160)||(19272343-19272503)
chr6 (1-111)||(19405814-19405926)
chr6 (1-110)||(23496542-23496653)
chr6 (1-110)||(23490944-23491055)
chr6 (1-110)||(19025418-19025529)
chr6 (1-112)||(16209785-16209898)
chr6 (1-112)||(30755557-30755670)
chr6 (1-110)||(19038461-19038572)
chr6 (1-110)||(23431904-23432015)
chr6 (1-112)||(1557711-1557824)
chr6 (360-401)||(16597641-16597682)
[»] scaffold0151 (2 HSPs)
scaffold0151 (1-224)||(14176-14399)
scaffold0151 (329-402)||(14496-14569)
[»] chr4 (16 HSPs)
chr4 (1-224)||(18567038-18567260)
chr4 (1-224)||(10267102-10267325)
chr4 (1-184)||(1658509-1658689)
chr4 (1-203)||(31079793-31079998)
chr4 (3-187)||(3077978-3078158)
chr4 (1-119)||(49526495-49526616)
chr4 (1-111)||(14556959-14557071)
chr4 (1-111)||(15153647-15153759)
chr4 (1-111)||(18108683-18108795)
chr4 (329-402)||(18567357-18567430)
chr4 (1-110)||(13277250-13277361)
chr4 (4-83)||(50687558-50687637)
chr4 (1-110)||(13292628-13292739)
chr4 (39-108)||(14022497-14022567)
chr4 (1-102)||(14714175-14714278)
chr4 (1-102)||(14775855-14775958)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-224)||(250113-250337)
[»] scaffold0096 (2 HSPs)
scaffold0096 (1-224)||(36201-36425)
scaffold0096 (329-394)||(36039-36104)
[»] scaffold0063 (2 HSPs)
scaffold0063 (1-205)||(70533-70739)
scaffold0063 (347-400)||(70346-70398)
[»] scaffold0770 (1 HSPs)
scaffold0770 (1-193)||(3732-3923)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-193)||(102036-102227)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-183)||(8903-9084)
[»] scaffold0014 (2 HSPs)
scaffold0014 (1-187)||(7343-7528)
scaffold0014 (348-402)||(7133-7186)
[»] scaffold0059 (2 HSPs)
scaffold0059 (1-181)||(68139-68321)
scaffold0059 (1-181)||(76244-76426)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-186)||(200040-200221)
[»] scaffold0013 (2 HSPs)
scaffold0013 (1-110)||(129152-129262)
scaffold0013 (1-181)||(107335-107518)
[»] scaffold0003 (1 HSPs)
scaffold0003 (3-108)||(33371-33477)
[»] scaffold0297 (1 HSPs)
scaffold0297 (4-119)||(8815-8931)
[»] scaffold0270 (2 HSPs)
scaffold0270 (1-111)||(8109-8221)
scaffold0270 (1-111)||(15239-15351)
[»] scaffold0023 (5 HSPs)
scaffold0023 (1-111)||(6687-6799)
scaffold0023 (1-112)||(84994-85107)
scaffold0023 (1-112)||(62133-62246)
scaffold0023 (1-112)||(71311-71424)
scaffold0023 (1-111)||(22608-22720)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-111)||(151431-151543)
[»] scaffold0795 (1 HSPs)
scaffold0795 (330-403)||(1975-2048)
[»] scaffold0417 (1 HSPs)
scaffold0417 (1-149)||(1251-1400)
[»] scaffold0358 (1 HSPs)
scaffold0358 (1-112)||(15703-15816)
[»] scaffold0423 (1 HSPs)
scaffold0423 (1-111)||(1721-1833)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-111)||(45264-45376)
[»] scaffold0046 (1 HSPs)
scaffold0046 (1-111)||(30579-30691)
[»] scaffold0108 (2 HSPs)
scaffold0108 (1-110)||(23017-23128)
scaffold0108 (1-106)||(44197-44304)
[»] scaffold0362 (1 HSPs)
scaffold0362 (1-108)||(11291-11400)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-112)||(8789-8902)
[»] scaffold0241 (1 HSPs)
scaffold0241 (1-112)||(25069-25182)
[»] scaffold0101 (2 HSPs)
scaffold0101 (1-111)||(46298-46410)
scaffold0101 (1-111)||(50936-51048)
[»] scaffold0130 (3 HSPs)
scaffold0130 (3-112)||(29373-29484)
scaffold0130 (2-106)||(39853-39959)
scaffold0130 (1-111)||(28559-28671)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-110)||(44291-44402)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-110)||(58491-58602)
[»] scaffold0740 (1 HSPs)
scaffold0740 (3-111)||(5621-5731)
[»] scaffold0216 (1 HSPs)
scaffold0216 (40-108)||(20041-20110)
[»] scaffold0026 (2 HSPs)
scaffold0026 (1-112)||(118397-118510)
scaffold0026 (1-112)||(142247-142360)
[»] scaffold0001 (5 HSPs)
scaffold0001 (1-112)||(25119-25232)
scaffold0001 (1-112)||(28617-28730)
scaffold0001 (1-112)||(390070-390183)
scaffold0001 (1-112)||(115376-115489)
scaffold0001 (1-112)||(129928-130040)
[»] scaffold0509 (2 HSPs)
scaffold0509 (1-111)||(1250-1362)
scaffold0509 (1-111)||(7678-7790)
[»] scaffold0304 (1 HSPs)
scaffold0304 (1-111)||(5810-5922)
[»] scaffold0239 (2 HSPs)
scaffold0239 (1-111)||(17024-17136)
scaffold0239 (29-104)||(5542-5618)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-111)||(32065-32177)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-111)||(41324-41436)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-110)||(2422-2533)
[»] scaffold0021 (2 HSPs)
scaffold0021 (4-112)||(18532-18642)
scaffold0021 (4-112)||(28063-28173)
[»] scaffold0323 (1 HSPs)
scaffold0323 (1-111)||(4505-4617)
[»] scaffold0253 (1 HSPs)
scaffold0253 (1-111)||(15353-15465)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-106)||(43149-43256)
[»] scaffold1496 (1 HSPs)
scaffold1496 (29-105)||(1396-1473)
[»] scaffold0854 (1 HSPs)
scaffold0854 (414-451)||(1415-1452)
[»] scaffold0035 (1 HSPs)
scaffold0035 (29-105)||(25811-25888)
[»] scaffold0504 (1 HSPs)
scaffold0504 (30-105)||(683-759)
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-102)||(63772-63875)
[»] scaffold0193 (1 HSPs)
scaffold0193 (40-112)||(26847-26920)


Alignment Details
Target: chr1 (Bit Score: 384; Significance: 0; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 1 - 451
Target Start/End: Original strand, 4229889 - 4230340
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||| || ||||||||||||||||    
T  4229889 tgcaacttgtgactcgtttatctcttccatgcggatagtttgagcgtaagttatttgtatgatagaattgtgacccttttctcctagggaaaactactat 4229988  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4229989 ttatacaaatagaaataactgcctagatttgaatctaaaactataactgcagtaaactaacgaaacttatccattcgatttgaatttcgaatgtgtcttg 4230088  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttca 299  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  4230089 aaaatatccattgtttgaccttatctgaatcaccacaagaattgtccttcgataaatttccgcctgtcgaactaacacacacgcttttgagtatttttca 4230188  T
Q  300 tcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 399  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4230189 gcaagtccaacttcgataggaaatgagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 4230288  T
Q  400 acacacctccagtcgtcgtcaccaccatcgtcgtcgaccttcacatgatgtc 451  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||||    
T  4230289 acacacctccagtcgtcgtcaccaccatcgctgttgaccttcacatgatgtc 4230340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4361672 - 4361872
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaa-ctacta 98  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||  ||||||||||||||||| || |||||||| |||||  |||||||||| ||||||    
T  4361672 tgcaacttgttactcgtttctctcttccatgcggataatttgagtataagttttttgtatgattgaattgtgaccttttttcgctagggaaaaactacta 4361771  T
Q  99 tttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    ||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  4361772 tttatacaaatagaaataactacatagatttcaatttaaaactataactgcagtaaactaacaatacttatccattcgatttgaatttcgaatgtatctt 4361871  T
Q  199 g 199  Q
    |    
T  4361872 g 4361872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 27902123 - 27901899
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaa-ctactat 99  Q
    ||||||||||||||| |||||||||| |||| ||||| |||||| ||||||||| |||||||| |  |||||||| ||||  || ||||||| |||||||    
T  27902123 tgcaacttgtgactcctttctctcttccatgtggataatttgagtgtaagttttgtgtatgattggattgtgacctttttcccttgggaaaaactactat 27902024  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| | || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  27902023 ttatacaaatagaaataactgcctagatttgaatttaaaactatgattgtagtaa-ctaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 27901925  T
Q  200 aaaatatccattgttt-gaccttatc 224  Q
    ||||||||| |||||| |||||||||    
T  27901924 aaaatatccgttgtttcgaccttatc 27901899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 2603514 - 2603746
Alignment:
Q  1 tgcaacttgtga-ctcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaa------ 92  Q
    |||||||||||| |||||||||||||| |||||||||| ||||||  ||||||||| ||||||| || |||| ||||||||| | ||  |||||          
T  2603514 tgcaacttgtgatctcgtttctctcttccatgcggataatttgagtttaagttttt-gtatgattgaattgtaaccctttttccctacagaaaaactact 2603612  T
Q  93 -ctactatttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
     ||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  2603613 actactatttatacaaatagaaataactacctagatttgaatttaaaactataactgcagtaaactaacaatacttatccattctatttgaatttcgaat 2603712  T
Q  192 gtgtcttgaaaatatccattg-tttgaccttatc 224  Q
    || ||||| || ||| | ||| ||||||||||||    
T  2603713 gtatcttggaagtattcgttgttttgaccttatc 2603746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 4 - 203
Target Start/End: Original strand, 21382078 - 21382278
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctaggga--aaactactattt 101  Q
    ||||||||||||||||||||||| |||||| ||| |||||| ||||| |||||||||||| || | ||||||| |||| ||  |||  |||| |||||||    
T  21382078 aacttgtgactcgtttctctcttccatgcgaataatttgagtgtaagctttttgtatgattgaatcgtgaccccttttcctttggaggaaaccactattt 21382177  T
Q  102 atacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaa 201  Q
    ||||||||||| |||| ||| || |||| |||  ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||    
T  21382178 atacaaatagagataattgcctaaatttaaattaaaaactataactgcagt-aactaacagaacttatccattcgatttgaatttcgaatgtgtctttaa 21382276  T
Q  202 aa 203  Q
    ||    
T  21382277 aa 21382278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 21168375 - 21168566
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||| ||||||| || ||||||||||||||  | | | |||||||||||    
T  21168375 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgattgaattgtgaccctttttcgttaagaaaaactactat 21168473  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgt 193  Q
    |||||||||||||||||||||| ||||||||  | ||||| ||||| ||||| |||||||| || |||| ||||| ||||||||||||||||||    
T  21168474 ttatacaaatagaaataactgcctagatttg-gtttaaaattataattgcagaaaactaactaatcttagccatttgatttgaatttcgaatgt 21168566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 23511714 - 23511525
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||||||||||| ||||||| || ||||||||| ||||| ||| | |||||||||||    
T  23511714 tgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactat 23511615  T
Q  100 ttata-caaataga-aataactgcatagatttgaatctaaaactataactgcag-taaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
    ||||| |||||||| ||||||| | ||| |||      ||||||||||||||||  |||||| | || |||| |||| |||||||||| ||||||    
T  23511614 ttataccaaatagagaataactacctagtttt-----aaaaactataactgcagaaaaactacctaatcttagccatccgatttgaatatcgaat 23511525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 50826482 - 50826323
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    |||||| ||||||||||||||| ||| ||  |||||| |||||| ||||| |||||||||||| || |||| |||||||||| ||| | |||| || |||    
T  50826482 tgcaacctgtgactcgtttctcgcttccaaacggataatttgagtgtaag-tttttgtatgattgaattgtaacccttttttcctaagaaaaattattat 50826384  T
Q  100 ttatacaaataga-aataactgcatagatttgaatctaaaactataactgcagtaaactaac 160  Q
    ||||||||||||| ||||||||| ||| ||| ||| ||||||||||||||||| ||||||||    
T  50826383 ttatacaaatagagaataactgcctag-tttaaatttaaaactataactgcagaaaactaac 50826323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21137759 - 21137648
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtg-acccttttttctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||||||||||| ||||||| || ||||| ||  ||||| ||| | |||||||||||    
T  21137759 tgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgaacagtttttcctaagaaaaactactat 21137660  T
Q  100 ttatacaaatag 111  Q
    ||||||||||||    
T  21137659 ttatacaaatag 21137648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29305323 - 29305211
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  29305323 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 29305224  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  29305223 tttatacaaatag 29305211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 27131810 - 27131736
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc 75  Q
    |||||||||||||||||||||||||| |||| ||||| |||||| ||||||||| ||||||||||  ||||||||    
T  27131810 tgcaacttgtgactcgtttctctcttccatgaggataatttgagtgtaagttttgtgtatgataggattgtgacc 27131736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21310834 - 21310725
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||| |||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  21310834 tgcaacttctgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 21310735  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  21310734 tttatacaaa 21310725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 22684669 - 22684778
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccct-tttttctagggaaaactacta 98  Q
    ||||||||||||||| ||| || ||| ||| |||| ||| |||||||||||||||| ||||||| || |||||||||| |||| |||  |||||||||||    
T  22684669 tgcaacttgtgactcatttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgaccctgttttcctaaagaaaactacta 22684768  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  22684769 tttatacaaa 22684778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 31845689 - 31845802
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||| |||||| || | ||||||||||    
T  31845689 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactacta 31845788  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  31845789 tttatacaaataga 31845802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1528680 - 1528793
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| ||  || ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  1528680 tgcaacttgtgactcgtttgtcgtttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcgtaagaaaaacttcta 1528779  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  1528780 tttatacaaataga 1528793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 21550622 - 21550522
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtga-cccttttttctagggaaaactactatttat 103  Q
    |||||| ||||||||||||||   |||||||||||||||| ||||||||| |||||||| || |||||| || ||||| ||| | |||||||||||||||    
T  21550622 acttgttactcgtttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgatccgtttttcctatgaaaaactactatttat 21550524  T
Q  104 ac 105  Q
    ||    
T  21550523 ac 21550522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 22809094 - 22809207
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| |  ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||| ||||    
T  22809094 tgcaacttgtgactcgtttgttgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaaccacta 22809193  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  22809194 tttatacaaataga 22809207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 21076664 - 21076556
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||| ||||||||   || ||| ||| |||||| |||||| |||||||||| ||||||| || |||||||| ||||||| || | |||||||||||    
T  21076664 tgcaacttatgactcgtcagtcgcttccatacggataatttgagtgtaagtttttagtatgattgaattgtgaccattttttcctaagaaaaactactat 21076565  T
Q  100 ttatacaaa 108  Q
    |||||||||    
T  21076564 ttatacaaa 21076556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 329 - 400
Target Start/End: Complemental strand, 27901803 - 27901732
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaa 400  Q
    ||||||| ||||||| |||||||||||||||||||||   ||| ||||||  ||||||||||||||||||||    
T  27901803 aacaattccttcgattataaggtcaacctattttgactatatttaatgatgccctttaaaaatattggctaa 27901732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 191
Target Start/End: Complemental strand, 27130256 - 27130166
Alignment:
Q  101 tatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
    ||||| ||||||||||| | | || |||||||| | |||||| ||||||  ||||||||||| ||||||| ||| ||||||||||||||||    
T  27130256 tatacgaatagaaataaatacctatatttgaatttgaaactaaaactgctataaactaacaacacttatctattggatttgaatttcgaat 27130166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 104
Target Start/End: Original strand, 16406809 - 16406910
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactattta 102  Q
    |||||||||||||||||||||||  ||| ||||||||| || ||||||||  |||||||| | ||||||||   |||||| || | ||||||||||||||    
T  16406809 aacttgtgactcgtttctctcttgaatgtggatagtttaagtgtaagtttcgtgtatgatcggtttgtgacatgtttttcttatgaaaaactactattta 16406908  T
Q  103 ta 104  Q
    ||    
T  16406909 ta 16406910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 27562001 - 27561892
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatt 100  Q
    ||||||||||||||||| || ||| ||| |||| ||| ||||| ||||||||||||||| || || ||||||||  |||||| || | |||||| |||||    
T  27562001 caacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtattattgaattgtgacctgtttttcttaagaaaaacttctatt 27561902  T
Q  101 tatacaaata 110  Q
    ||||||||||    
T  27561901 tatacaaata 27561892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 22086502 - 22086398
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatt 100  Q
    ||||||||||||||||| || ||| ||| |||| ||| || || |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||||    
T  22086502 caacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatt 22086403  T
Q  101 tatac 105  Q
    |||||    
T  22086402 tatac 22086398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 403
Target Start/End: Complemental strand, 50826141 - 50826085
Alignment:
Q  348 aggtcaacctattttgaccgcattaaatgataacc-tttaaaaatattggctaacac 403  Q
    ||||||||||  |||||||||||||||||||| || |||||||||||||||||||||    
T  50826141 aggtcaaccttctttgaccgcattaaatgatagccttttaaaaatattggctaacac 50826085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 329 - 403
Target Start/End: Original strand, 4361994 - 4362068
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    |||||||  |||||| | |||||||||||| |||||  ||||| ||||||| || ||||||||||||||||||||    
T  4361994 aacaattctttcgattacaaggtcaacctactttgagtgcatttaatgatagcccttaaaaatattggctaacac 4362068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 18530622 - 18530577
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgac 74  Q
    |||||||||||||||| |||||||||||||||| | || |||||||    
T  18530622 atgcggatagtttgagtgtaagttttttgtatggttgaattgtgac 18530577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 242; Significance: 1e-134; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 15337416 - 15337037
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||| |||||| | ||||| | ||||||||||||||||    
T  15337416 tgcaacttgtgactcgttgctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgatcttttttccctagggaaaactactat 15337317  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15337316 ttatacaaatagaaattactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttg 15337217  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcac-aagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    ||||||||  ||| ||||||||||||||| ||  || || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||     
T  15337216 aaaatatctgttgcttgaccttatctgaaccacaacaaaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtattttt- 15337118  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataa 380  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  15337117 atcaagtccaacttcgatagg-aatgagaaaacaatttcttcgatgataagatcaacctattttgactgcattaaatgataa 15337037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 15426481 - 15426102
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||| |||||| | ||||| | ||||||||||||||||    
T  15426481 tgcaacttgtgactcgttgctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgatcttttttccctagggaaaactactat 15426382  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15426381 ttatacaaatagaaattactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttg 15426282  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcac-aagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    ||||||||  ||| ||||||||||||||| ||  || || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||     
T  15426281 aaaatatctgttgcttgaccttatctgaaccacaacaaaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtattttt- 15426183  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataa 380  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  15426182 atcaagtccaacttcgatagg-aatgagaaaacaatttcttcgatgataagatcaacctattttgactgcattaaatgataa 15426102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 380
Target Start/End: Complemental strand, 15517785 - 15517406
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||| |||||| | ||||| | ||||||||||||||||    
T  15517785 tgcaacttgtgactcgttgctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgatcttttttccctagggaaaactactat 15517686  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  15517685 ttatacaaatagaaattactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtcttg 15517586  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcac-aagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    ||||||||  ||| ||||||||||||||| ||  || || || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||     
T  15517585 aaaatatctgttgcttgaccttatctgaaccacaacaaaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagtattttt- 15517487  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataa 380  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  15517486 atcaagtccaacttcgatagg-aatgagaaaacaatttcttcgatgataagatcaacctattttgactgcattaaatgataa 15517406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 22698131 - 22698356
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  22698131 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgacccttttttcctagggaaaactactat 22698230  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    ||||||||||||||||||| || ||||||||||| | ||||| | |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  22698231 ttatacaaatagaaataaccgcctagatttgaattttaaacttttactgcagtaaactaactatacttatccattcgatttgaatttcgaatgtgtcttg 22698330  T
Q  200 aaaatatccattg-tttgaccttatc 224  Q
     || ||||| ||| ||||||||||||    
T  22698331 gaagtatccgttgttttgaccttatc 22698356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 18735474 - 18735283
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    ||||||||||||||||||||| |||| |||||||||| |||||| ||||| |||||||||||| || |||||||||||||||| || |  ||||||||||    
T  18735474 tgcaacttgtgactcgtttctttcttccatgcggataatttgagtgtaag-tttttgtatgattgaattgtgacccttttttcttaagagaaactactat 18735376  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgt 193  Q
    |||||||||||||||||||||| |||||||| || ||||||||||||||||| |||||||| || |||| ||||| |||||||||||| |||||    
T  18735375 ttatacaaatagaaataactgcctagatttg-atttaaaactataactgcagaaaactaactaatcttagccatttgatttgaatttcaaatgt 18735283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 41438877 - 41438988
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    ||||||||||||||||||  || ||| ||| |||||| ||||||||||||||||| ||||||| || ||||||||||||||| ||| | |||||||||||    
T  41438877 tgcaacttgtgactcgttcatcgcttccatacggatattttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactat 41438976  T
Q  100 ttatacaaatag 111  Q
    ||||||| ||||    
T  41438977 ttatacagatag 41438988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 105
Target Start/End: Complemental strand, 15911814 - 15911712
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactattta 102  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||| |||||||| | |||||||||  |||| | || | ||||||||||||||    
T  15911814 aacttgtgactcgtttctctcttgaatgcggatagtttgagtgtaagttttgtgtatgattggtttgtgacctattttccttatgaaaaactactattta 15911715  T
Q  103 tac 105  Q
    |||    
T  15911714 tac 15911712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 385
Target Start/End: Complemental strand, 32116519 - 32116439
Alignment:
Q  304 gtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataaccttt 385  Q
    |||||||||||||||||| | |||||||||||||||||| |||||| ||||| ||||||||| |||||||||||||| ||||    
T  32116519 gtccaacttcgataggaatg-agaaaacaatttcttcgacgataagatcaacttattttgactgcattaaatgataatcttt 32116439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22352045 - 22352157
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  22352045 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 22352144  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  22352145 tttatacaaatag 22352157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17426128 - 17426240
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  17426128 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactacta 17426227  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  17426228 tttatacagatag 17426240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 20193186 - 20193298
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||  || ||||||||| ||||||||| | ||||||||||    
T  20193186 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgacccattttttctaagaaaaactacta 20193285  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  20193286 tttatacagatag 20193298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 29708199 - 29708310
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactat 99  Q
    ||||||||||||||||||  || ||| ||| | || | ||||||||||||||||| ||||||| || ||||||||| ||||| ||| | |||||||||||    
T  29708199 tgcaacttgtgactcgttagtcgcttccatacagacaatttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactat 29708298  T
Q  100 ttatacaaatag 111  Q
    ||||||| ||||    
T  29708299 ttatacagatag 29708310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25389014 - 25389127
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||  |||||| || | ||||||||||    
T  25389014 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgaccaatttttcctaagaaaaactacta 25389113  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  25389114 tttatacaaataga 25389127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 403
Target Start/End: Original strand, 22698471 - 22698525
Alignment:
Q  349 ggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    ||||||||||||||||| ||||| ||||||| |||||||||||| ||||||||||    
T  22698471 ggtcaacctattttgactgcatttaatgatagcctttaaaaatactggctaacac 22698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27818294 - 27818173
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatag--tttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactact 97  Q
    |||||||||||||||||||||||||| |||  ||||||  ||| || ||||||||| ||||| || |  ||||||||| |||  || ||| |||||||||    
T  27818294 tgcaacttgtgactcgtttctctcttgcatatggatagtttttaagtgtaagttttgtgtatcattggattgtgacccctttccctaaggaaaaactact 27818195  T
Q  98 atttatacaaatagaaataact 119  Q
    |||||||| ||||||| |||||    
T  27818194 atttatactaatagaagtaact 27818173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 22064692 - 22064583
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| |   || || |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  22064692 tgcaacttgtgactcgtttgtcgcttccatacggacatcattaagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 22064593  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  22064592 tttatacaaa 22064583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16667986 - 16668098
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| |||  ||| ||| ||||| |||||||||| ||||||| || |||||||| |||||| ||| | ||||||||||    
T  16667986 tgcaacttgtaactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaattgtgaccactttttcctaagaaaaactacta 16668085  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  16668086 tttatacagatag 16668098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 360 - 403
Target Start/End: Complemental strand, 18735121 - 18735078
Alignment:
Q  360 tttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  18735121 tttgaccgtattaaatgatagcctttaaaaatattggctaacac 18735078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 22698768 - 22698843
Alignment:
Q  7 ttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc 83  Q
    |||| |||| |||||||||  |||||||||| |||||| ||||||||| |||||| | || ||||||||||||||||    
T  22698768 ttgtaactcatttctctcta-catgcggataatttgagtgtaagttttctgtatggttgaattgtgacccttttttc 22698843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 37130506 - 37130105
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaa-ctacta 98  Q
    |||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||||||| || ||| |||||||||| | ||||||||| ||||||    
T  37130506 tgcaacttgtgactcgtttctctcttccatgcggataatttgattgtaagttttttgtatgattgaattgcgaccctttttccctagggaaaaactacta 37130407  T
Q  99 tttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||    
T  37130406 tttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccatttgatttgaatttcgaacgtgtctt 37130307  T
Q  199 gaaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataac-tttccgcatgtcgaactaacacacacgcttttgagtattttt 297  Q
    |||||||||| ||| ||||||||||| ||| ||  || | |||||||||||| |||| ||| ||| ||||||||||| ||||| ||||| ||| | ||||    
T  37130306 gaaaatatccgttgcttgaccttatccgaaccacaacca-aattgtccttcggtaactttttcgcctgtcgaactaaaacacatgctttcgagca-tttt 37130209  T
Q  298 catcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggc 397  Q
    || ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||     
T  37130208 cagcaagtccaacttcgatagg-aatgagaaaacaatttcttcgatgataaggtcaacctattttgactgcattaaatgatagcctttaaaaatattggt 37130110  T
Q  398 taaca 402  Q
    |||||    
T  37130109 taaca 37130105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 28567752 - 28568148
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    ||||||||||||||| |||||||||| |||||||||| |||||| |||||||||| |||||||||| |||||||| ||||| || | |||||||||||||    
T  28567752 tgcaacttgtgactcatttctctcttccatgcggataatttgagtgtaagttttt-gtatgatagaattgtgaccttttttcctgaaggaaaactactat 28567850  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    || ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||    
T  28567851 ttctacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaacgatacttatccattcgatttgaatttcgaa--tgtcttg 28567948  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttca 299  Q
    ||||| |   ||| ||||||||||||||| ||  |||| || ||||||||||||||||| ||| ||||||| ||| ||||| ||||| |||  |||||||    
T  28567949 aaaatgtttgttgcttgaccttatctgaaccacaacaa-aactgtccttcgataacttttcgcctgtcgaattaa-acacatgctttcgag-ctttttca 28568045  T
Q  300 tcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacc-tttaaaaatattggct 398  Q
     |||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  28568046 gcaagtctaacttcgatagg-aatgagaaaacaatttcttcgatgataaggtcaacctattttgactgcattaaatgataaccttttaaaaatattggct 28568144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 23870552 - 23870950
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactactat 99  Q
    ||||||||||||||||||||||||| || |||  ||| |||||| |||||||||||||||||| || |||||||| ||||||| |||| |||||||||||    
T  23870552 tgcaacttgtgactcgtttctctctctcgtgcaaataatttgagtgtaagttttttgtatgattgaattgtgaccacttttttttaggaaaaactactat 23870651  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  23870652 ttatacaaatagaaataactacctagatttgaatttaaaactataacggcagtaaactaacaatacttattcattcgatttgaatttcgaaagtgtcttg 23870751  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttca 299  Q
     |||||||  ||| ||||||||||| ||| ||  |||| || || ||||||||||||||||||  |||||||||| ||||||||||| ||| | ||||||    
T  23870752 -aaatatctgttgcttgaccttatccgaaccacaacaa-aactgcccttcgataactttccgcccgtcgaactaaaacacacgctttcgagca-ttttca 23870848  T
Q  300 tcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 399  Q
     |||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||| |||||| || ||| |||||||||||||||| ||    
T  23870849 gcaagtccaacttcgatcggaga-gagaaaacaatttcttcgatgagaaggtcaacctattttgactgcattatattatagcctttaaaaatattggtta 23870947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 22708273 - 22707874
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    ||||| |||||| ||||||||||||| |||||||||| ||| || ||||||||||||||| || || ||||||||  |||| || ||| |||||||||||    
T  22708273 tgcaatttgtgattcgtttctctcttgcatgcggataatttaagtgtaagttttttgtataattgaattgtgaccacttttcctgaggaaaaactactat 22708174  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    ||||| |||||||||||||| | ||||||||||| ||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  22708173 ttatagaaatagaaataactacctagatttgaatttaaaactataactgcagtaaattaataatacttatccattcgatttgaatttcgaatgtgtcttg 22708074  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttcc-gcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    ||| ||||  ||| ||||||||||| ||| ||  |||| || ||||||| |||||||||   ||  |||||||||| ||||||||||| ||| ||||| |    
T  22708073 aaa-tatctgttgcttgaccttatccgaaccacaacaa-aactgtccttggataacttttttgcccgtcgaactaaaacacacgctttcgagcatttt-c 22707977  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggct 398  Q
    | |||||||||||||||| ||| || ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| |||||||||||||||| |    
T  22707976 agcaagtccaacttcgatcggagag-agaaaacaatttcttcgatgacaaggtcaacctattttgactgcattaaattatagcctttaaaaatattggtt 22707878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 7 - 403
Target Start/End: Original strand, 21256506 - 21256901
Alignment:
Q  7 ttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactatttatac 105  Q
    |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| || ||||||||  |||| || |||||||||||||||||||||    
T  21256506 ttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccacttttccttagggaaaactactatttatac 21256605  T
Q  106 aaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaaaata 205  Q
    |||||||||||||| | || |||| ||| ||||||||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  21256606 aaatagaaataactacctatatttaaatttaaaactataactgtggtaaactaacaatacttatccattcgatttgaattttgaatgtgtcttgaaaata 21256705  T
Q  206 tccattgtttgaccttatctgaatcagcacaagaattgtccttcgataac-tttccgcatgtcgaactaacacacacgcttttgagtatttttcatcaag 304  Q
    | | ||| |||||||||||  || ||  |||| || || ||||||||||| ||| ||| ||||||||||| |||| |||||| ||| | |||||| ||||    
T  21256706 ttcgttgcttgaccttatccaaaccacaacaa-aactgcccttcgataactttttcgcctgtcgaactaaaacacgcgctttcgagca-ttttcagcaag 21256803  T
Q  305 tccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    |||||||| ||||  ||| ||||||||||||| |||||||| ||| |||| |||||||||| ||||||||||||| ||||| ||||||  |||||||||    
T  21256804 tccaactttgata-taaaagagaaaacaatttattcgatgacaagatcaatctattttgactgcattaaatgatagcctttgaaaataccggctaacac 21256901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 23815024 - 23815215
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagtttttt-gtatgatagatttgtgacccttttttc--tagggaaaactact 97  Q
    |||||||||||||||||||||||||| |||||||||| ||| || ||||||||||| |||||||||| ||||||||||||||||  ||||||||||||||    
T  23815024 tgcaacttgtgactcgtttctctcttccatgcggataattttagtgtaagtttttttgtatgatagaattgtgacccttttttccttagggaaaactact 23815123  T
Q  98 atttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcga 189  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  23815124 atttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagtaaactaactatacttatccattcgatttgaatttcga 23815215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 34827659 - 34827882
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaa-ctactattt 101  Q
    |||||||||||||||||||||||| ||||| |||| |||||| |||||||||||||||||| || |||||||||||||| |||||||||| |||||||||    
T  34827659 caacttgtgactcgtttctctcttccatgcagataatttgagtgtaagttttttgtatgattgaattgtgaccctttttcctagggaaaaactactattt 34827758  T
Q  102 atacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaa 201  Q
    ||| |||||||||||||| | ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| | |||||    
T  34827759 atataaatagaaataactacctagatttgaatttaaaactataactgcggtaaactaacaatacttatccattcgatttgaatttcgaatgtattttgaa 34827858  T
Q  202 aatatccattg-tttgaccttatc 224  Q
    | ||||  ||| ||||||||||||    
T  34827859 agtatctgttgttttgaccttatc 34827882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 23803394 - 23803622
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagtttttt-gtatgatagatttgtgacccttttttct----agggaaaacta 95  Q
    |||||||||| ||||||||||||||| |||||||||| |||||| | ||||||||| |||||||||| ||||||||||||||| |    ||| |||||||    
T  23803394 tgcaacttgttactcgtttctctcttccatgcggataatttgagtgcaagtttttttgtatgatagaattgtgacccttttttatttataggaaaaacta 23803493  T
Q  96 ctatttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgt 195  Q
    |||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| ||    
T  23803494 ctatttatacaaatagaaataactacctagatttgaatttaaaactataactgcagtaaactaactatacttatccactcgatttgaatttcgaatgagt 23803593  T
Q  196 cttgaaaatatccattg-tttgaccttat 223  Q
    |||| || ||||| ||| |||||||||||    
T  23803594 cttggaagtatccgttgttttgaccttat 23803622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 16664712 - 16664904
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||||||||||| ||||||| || ||||||||| ||||||||| | |||||||||||    
T  16664712 tgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaagtttttagtatgattgaattgtgaccctttttttctaagaaaaactactat 16664811  T
Q  100 ttatacaaataga-aataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
    |||||||||||||  |||||| | ||| ||  | | |||||||||||||| || |||||| | || |||| |||| |||||||||| ||||||    
T  16664812 ttatacaaatagaggataactacctagtttaaattttaaaactataactgtagaaaactacctaatcttagccatacgatttgaatatcgaat 16664904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 22881048 - 22880857
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||||||| |||||||||||||| || |||||| ||||||| || ||||||| ||||||| ||| | |||||||||||    
T  22881048 tgcaacttgtgactcgtttatcgctttcatacggatagtttgagcatatgtttttagtatgattgaattgtgacacttttttcctaagaaaaactactat 22880949  T
Q  100 ttatacaaataga-aataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
    |||||||||||||  |||||| | ||| ||||||| ||||||||||||||||| |||||| | || |||| |||| |||||| ||| ||||||    
T  22880948 ttatacaaatagaggataactacctag-tttgaatttaaaactataactgcagaaaactacctaatcttagccatacgatttaaatatcgaat 22880857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 22593845 - 22593716
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||| ||| |||||| |||||||||||||||||| || |||||||||||||  | |||  |||||||||||    
T  22593845 tgcaacttgtgactcgtttctctcttccatgcgcataatttgagtgtaagttttttgtatgattgaattgtgacccttttcccttagaaaaaactactat 22593746  T
Q  100 ttatacaaatagaaataactgcatagattt 129  Q
    ||||||||||| |||||||| | |||||||    
T  22593745 ttatacaaatataaataactacctagattt 22593716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 31818019 - 31817908
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||||| ||||| ||| ||| || ||||||||| |||||| || | |||||||||||    
T  31818019 tgcaacttgtgactcgtttatcgcttccatacggatagtttgagcgtaaatttttagtacgattgaattgtgacccgtttttcataagaaaaactactat 31817920  T
Q  100 ttatacaaatag 111  Q
    ||||||| ||||    
T  31817919 ttatacagatag 31817908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 10480432 - 10480552
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc--tagggaaaactacta 98  Q
    ||||||||| |||| |||||||||||  |||||||||||| ||| ||||||||| |||||||| |  |||||||||||||  |   ||| ||||||||||    
T  10480432 tgcaacttgcgacttgtttctctcttgaatgcggatagttcgagtgtaagttttgtgtatgattggattgtgacccttttcccctaaggaaaaactacta 10480531  T
Q  99 tttatacaaatagaaataact 119  Q
    ||||||| |||||||||||||    
T  10480532 tttatactaatagaaataact 10480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 20524241 - 20524168
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgac 74  Q
    ||||||||||||||||||| ||||||  |||||||||||||||| ||||||||| |||||||| || |||||||    
T  20524241 tgcaacttgtgactcgtttttctcttaaatgcggatagtttgagtgtaagttttctgtatgattgaattgtgac 20524168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 330 - 402
Target Start/End: Original strand, 23803720 - 23803792
Alignment:
Q  330 acaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    |||||| ||||||| | ||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||    
T  23803720 acaattccttcgattacaaggtcaacctattttgactgcatttaatgatagcccttaaaaatattggctaaca 23803792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 21905007 - 21905078
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc 75  Q
    ||||||||||||||| |||||||  ||| |||||||||||| |||||||||||||||||| | |||||||||    
T  21905007 aacttgtgactcgttcctctcttgaatgtggatagtttgagtgtaagttttttgtatgattggtttgtgacc 21905078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 30051939 - 30052039
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactatttat 103  Q
    |||||| ||||||||||||||   |||||||||||||||| ||||||||| |||||||| || ||||||||| ||||| ||| | ||| |||||||||||    
T  30051939 acttgttactcgtttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactatttat 30052037  T
Q  104 ac 105  Q
    ||    
T  30052038 ac 30052039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 30142983 - 30143083
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactatttat 103  Q
    |||||| ||||||||||||||   |||||||||||||||| ||||||||| |||||||| || ||||||||| ||||| ||| | ||| |||||||||||    
T  30142983 acttgttactcgtttctctctga-atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccatttttcctatgaaaagctactatttat 30143081  T
Q  104 ac 105  Q
    ||    
T  30143082 ac 30143083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 39227482 - 39227591
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||||| |||||| ||  || ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  39227482 tgcaacttgtgattcgtttgtcgattccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 39227581  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  39227582 tttatacaaa 39227591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 403
Target Start/End: Original strand, 23815319 - 23815420
Alignment:
Q  301 caagtccaacttcgata-ggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 399  Q
    ||||||||||||||||| |||||  |||| |  ||| ||||||| | |||||||||||||||||||  |||| ||||||| || ||||||||||||||||    
T  23815319 caagtccaacttcgataaggaaaaaagaata--attccttcgattacaaggtcaacctattttgactacatttaatgatagcccttaaaaatattggcta 23815416  T
Q  400 acac 403  Q
    ||||    
T  23815417 acac 23815420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22648678 - 22648571
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||  ||||| ||| | ||||||||||    
T  22648678 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactacta 22648579  T
Q  99 tttataca 106  Q
    ||||||||    
T  22648578 tttataca 22648571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23190283 - 23190390
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||| ||| || ||||||||| ||||| ||| | ||||||||||    
T  23190283 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactacta 23190382  T
Q  99 tttataca 106  Q
    ||||||||    
T  23190383 tttataca 23190390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23611538 - 23611645
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||| ||| || ||||||||| ||||| ||| | ||||||||||    
T  23611538 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactacta 23611637  T
Q  99 tttataca 106  Q
    ||||||||    
T  23611638 tttataca 23611645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25349307 - 25349369
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgat 63  Q
    |||||||| ||||||||| |||||||  |||||||||||||||| ||||||||| ||||||||    
T  25349307 tgcaacttatgactcgttcctctcttgaatgcggatagtttgagtgtaagttttgtgtatgat 25349369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Original strand, 23769418 - 23769511
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactac 96  Q
    |||||||||||||||||||||||  ||||||||| |||||| |||| |||| ||||||||   ||| |||||| ||||| ||| ||||||||||    
T  23769418 aacttgtgactcgtttctctcttgaatgcggataatttgagtgtaaattttgtgtatgattagtttatgacccgtttttcctatggaaaactac 23769511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 24896738 - 24896625
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||||||| |||| || ||| ||| || | ||| ||||| |||||||||  ||||||| || ||||||||| |||||| || | ||||||||||    
T  24896738 tgcaacttgtgactagtttgtcgcttccatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactacta 24896639  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  24896638 tttatacaaataga 24896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 34827975 - 34828048
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    |||||||  |||||| | ||||||||||||||||||| ||||| ||||||| | |||| |||||||||||||||    
T  34827975 aacaattcattcgattacaaggtcaacctattttgactgcatttaatgatagcttttagaaatattggctaaca 34828048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Complemental strand, 24967594 - 24967522
Alignment:
Q  40 ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactatttatacaaatag 111  Q
    ||||| |||||||||| ||||||| || ||||||||||||||| ||| | |||||||||||||||||| ||||    
T  24967594 ttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacagatag 24967522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 22633929 - 22633822
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||  ||||| | | | ||||||||||    
T  22633929 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttccaaagaaaaactacta 22633830  T
Q  99 tttataca 106  Q
    ||||||||    
T  22633829 tttataca 22633822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23203899 - 23204006
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||| ||| || ||| ||| |||| ||| ||||| |||||||||| ||| ||| || ||||||||| |||||| || | ||||||||||    
T  23203899 tgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtacgattgaattgtgacccgtttttcctaagaaaaactacta 23203998  T
Q  99 tttataca 106  Q
    ||||||||    
T  23203999 tttataca 23204006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 23615143 - 23615250
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| | || ||| ||||| |||||||||| ||||||| || ||||||||  ||||| ||| | ||||||||||    
T  23615143 tgcaacttgtgactcgtttgtcgcttccatacagacagtattgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactacta 23615242  T
Q  99 tttataca 106  Q
    ||||||||    
T  23615243 tttataca 23615250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 30089977 - 30090031
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc 83  Q
    |||||||||||||||| ||||||||| |||||||| || ||||||||| ||||||    
T  30089977 atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttc 30090031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 30126582 - 30126636
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc 83  Q
    |||||||||||||||| ||||||||| |||||||| || ||||||||| ||||||    
T  30126582 atgcggatagtttgagtgtaagttttctgtatgattgaattgtgacccgtttttc 30126636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23829872 - 23829908
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggata 37  Q
    |||||||||||||||||||||||||| ||||||||||    
T  23829872 tgcaacttgtgactcgtttctctcttccatgcggata 23829908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 20281185 - 20281285
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactactatttat 103  Q
    |||||| ||||||||||||||   ||||||||||| |||| |||| |||| |||||||  || ||||||||  ||||||||  | |||||||||||||||    
T  20281185 acttgttactcgtttctctctga-atgcggatagtatgagtgtaaattttctgtatgactgaattgtgacctgttttttctttgaaaaactactatttat 20281283  T
Q  104 ac 105  Q
    ||    
T  20281284 ac 20281285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 74
Target Start/End: Original strand, 23995697 - 23995765
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgac 74  Q
    |||||| ||||||||||||||   |||| ||||||||||| ||||||||| |||||||| || |||||||    
T  23995697 acttgttactcgtttctctctaa-atgcagatagtttgagtgtaagttttctgtatgattgaattgtgac 23995765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 215; Significance: 1e-118; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 3 - 405
Target Start/End: Original strand, 43135615 - 43136016
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt--ctagggaaaactactatt 100  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| || |||||||| ||||||  ||||||||||||||||||    
T  43135615 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccttttttttcctagggaaaactactatt 43135714  T
Q  101 tatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttga 200  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| | |||||||||||| |||||||||||||| |||||||||    
T  43135715 tatacaaatagaaataactgcctagatttgaatttaaaactataattgcagtaaactaactatacttatccattcaatttgaatttcgaacgtgtcttga 43135814  T
Q  201 aaatatccattgtttgaccttatctgaa-tcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttca 299  Q
    |||||||| ||| ||||||||||||||| |||| |||| || || |||| |||||||||| |  ||||||||  | |||||||||||  |||  | ||||    
T  43135815 aaatatccgttgcttgaccttatctgaattcagaacaa-aaatgccctttgataactttctgtctgtcgaaccgaaacacacgctttcaagt-gtcttca 43135912  T
Q  300 tcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 399  Q
     ||||||||||||||||||| || || || ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  43135913 gcaagtccaacttcgatagg-aatgaaaagacaatttcttcaatgataaggtcaacctattttgactgcattaaatgataacc-ttaaaaatattggcta 43136010  T
Q  400 acacac 405  Q
    ||||||    
T  43136011 acacac 43136016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 132482 - 132875
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaa-ctacta 98  Q
    |||||||||||||||||||||||||| |||||  ||| |||| | |||||||||||||||||| || |||||||||||||||| ||||||||| ||||||    
T  132482 tgcaacttgtgactcgtttctctcttccatgcaaataatttgcgtgtaagttttttgtatgattgaattgtgacccttttttcctagggaaaagctacta 132581  T
Q  99 tttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    |||||| |||||||||||||| | || |||||||| |||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  132582 tttatataaatagaaataactacctaaatttgaatttaaatctataactgcagtaaactaacaatatttatccattcgatttgaatttcgaatgtgtctt 132681  T
Q  199 gaaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    | |||||||  ||  |||||||||||     ||    || ||||| |||||||  | |||||   ||||||||  |||||| |||||| ||||| | | |    
T  132682 ggaaatatctgttacttgaccttatc-----ca----aaaaattgcccttcga-gagtttccatttgtcgaaccgacacacgcgctttcgagta-tctcc 132770  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgata--acctttaaaaatattgg 396  Q
    | ||||||||||||||||| | || |||| ||||||||||||||| |||||||||||||||||| || ||||| |||||||   | ||| ||||||||||    
T  132771 agcaagtccaacttcgataag-aatgagataacaatttcttcgattataaggtcaacctattttaactgcatttaatgatagcgcttttgaaaatattgg 132869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10139866 - 10139754
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  10139866 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 10139767  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  10139766 tttatacaaatag 10139754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 32 - 151
Target Start/End: Complemental strand, 22445011 - 22444887
Alignment:
Q  32 cggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaac--tactatttatacaaa-taga-aataactgcataga 126  Q
    |||||||||||| |||||||||||  |||||| || |||||||||||||||| || | ||||   ||||||||||||||| |||| ||||||||| ||||    
T  22445011 cggatagtttgaacgtaagtttttaatatgattgaattgtgacccttttttcctaagaaaaataatactatttatacaaaatagagaataactgcctaga 22444912  T
Q  127 tttgaatctaaaactataactgcag 151  Q
    ||||||| |||||||||||| ||||    
T  22444911 tttgaatttaaaactataaccgcag 22444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7341490 - 7341602
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| |||||||||||||||| ||||||| || |||||||| |||||| ||| | ||||||||||    
T  7341490 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaactacta 7341589  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  7341590 tttatacagatag 7341602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7396236 - 7396348
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| |||||||||||||||| ||||||| || |||||||| |||||| ||| | ||||||||||    
T  7396236 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaactacta 7396335  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  7396336 tttatacagatag 7396348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10171233 - 10171121
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  10171233 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 10171134  T
Q  99 tttatacaaatag 111  Q
    |||| ||||||||    
T  10171133 tttacacaaatag 10171121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14683177 - 14683289
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  14683177 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 14683276  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  14683277 tttatacagatag 14683289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12844600 - 12844711
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactat 99  Q
    |||||||||| |||||||  || ||| ||| |||| ||||||||||||||||||| ||||||| || ||||||||| ||||  ||| | |||||||||||    
T  12844600 tgcaacttgtaactcgttagtcgcttccatacggacagtttgagcgtaagtttttagtatgattgaattgtgacccattttccctaagaaaaactactat 12844699  T
Q  100 ttatacaaatag 111  Q
    ||||| ||||||    
T  12844700 ttatataaatag 12844711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 12492022 - 12491913
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| | | || || |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  12492022 tgcaacttgtgactcgtttgtcgcttccatacggacattatttagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 12491923  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  12491922 tttatacaaa 12491913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13299493 - 13299605
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||| ||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  13299493 tgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactacta 13299592  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  13299593 tttatacagatag 13299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13310151 - 13310263
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||| ||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  13310151 tgcaacttgtgactcatttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactacta 13310250  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  13310251 tttatacagatag 13310263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10779087 - 10778975
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttt-tctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || |||||||||||||| |  ||  ||||||||||    
T  10779087 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgaccctttttcttaagaaaaaactacta 10778988  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  10778987 tttatacagatag 10778975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 11887364 - 11887252
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||  ||||||| || |||||||||||||| || ||  ||||||||||    
T  11887364 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttaagtatgattgaattgtgaccctttttcctaagaaaaaactacta 11887265  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  11887264 tttatacagatag 11887252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13023978 - 13023870
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    |||||||||||||||||   |  ||| ||| |||| | |||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||| |    
T  13023978 tgcaacttgtgactcgtcagtggcttccatacggacaatttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacttt 13023879  T
Q  100 ttatacaaa 108  Q
    |||||||||    
T  13023878 ttatacaaa 13023870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 55002422 - 55002498
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaactactatttatac 105  Q
    |||||||||||||| | |||||||||||||||||| || ||||||||| |||||||  |  ||||| ||||||||||    
T  55002422 atgcggatagtttgcgtgtaagttttttgtatgattgaattgtgacccgtttttctttgagaaactgctatttatac 55002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 12021543 - 12021613
Alignment:
Q  39 tttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactactatttatacaaa 108  Q
    |||||| |||||||||| ||||||| || |||||||| |||||| ||| | ||||||||||||||||||||    
T  12021543 tttgagtgtaagtttttagtatgattgaattgtgacctctttttcctaagaaaaactactatttatacaaa 12021613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 10792605 - 10792493
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttt-tctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| | | ||||| |||||||||| ||||||| || |||||||||||||| |  ||  ||||||||||    
T  10792605 tgcaacttgtaactcgtttgtcgcttccatacggacactattgagtgtaagtttttagtatgattgaattgtgaccctttttcttaagaaaaaactacta 10792506  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  10792505 tttatacagatag 10792493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 22444692 - 22444638
Alignment:
Q  348 aggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    |||||||||||  ||||||| ||||||||||| || || ||||||||||||||||    
T  22444692 aggtcaacctacattgaccgtattaaatgatagccctttaaaatattggctaaca 22444638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 14133402 - 14133303
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatttat 103  Q
    |||||| ||||||||||||||   ||||||||||||||||  |||||||||| |||||| || ||||||| | |||||| || | ||||||| |||||||    
T  14133402 acttgttactcgtttctctctga-atgcggatagtttgagtataagtttttt-tatgattgaattgtgactcgtttttcttatgaaaaactattatttat 14133305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 12425 - 12025
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaa-ctactat 99  Q
    |||||||||||||| ||||||||||| |||||||||| |||||| |||||||||||||||||| |||||||||||  |||| ||| |||||| |||||||    
T  12425 tgcaacttgtgacttgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgatttgtgacctcttttcctaaggaaaaactactat 12326  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    ||||| |||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12325 ttatataaatagaaataactacctagatttgaatttaaaactataactgcaataaactaacaatacttatccattcgatttgaatttcgaatgtgtcttg 12226  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttc-cgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    ||||||| | ||| ||| ||||||| ||| ||  |||| || || ||||||||||||||  |||   ||||||||| |||| |||||| ||| ||||| |    
T  12225 aaaatattcgttgcttgtccttatccgaaccacaacaa-aactgcccttcgataactttttcgcccatcgaactaaaacacgcgctttcgagcatttt-c 12128  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggct 398  Q
    | ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  12127 aacaagtccaacttcgataggaaag-agaaaacaatttcttcaatgacaaggtcaacctattttgactgcattaaataataacctttaaaaatattggct 12029  T
Q  399 aaca 402  Q
    ||||    
T  12028 aaca 12025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 403
Target Start/End: Complemental strand, 7523 - 7120
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc--tagggaaaactacta 98  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||||||||| || ||||||| ||||||||  |||||| | ||| ||    
T  7523 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtatgttttttgtatgattgaattgtgactcttttttccctagggagagctatta 7424  T
Q  99 tttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||  ||||||||||| | |||||||||||||||||||||||||||||||||||    
T  7423 tttatacaaatagaaataactgcctagatttgaatttaaaactataactatagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtctt 7324  T
Q  199 g-aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtattttt 297  Q
    | |||||||   ||| |||||||||||| || |  ||  | || ||||||||||||||||||||| ||||||||||| ||||||||||| ||||| | |     
T  7323 gaaaaatatatgttgcttgaccttatctaaaaccacaacaaaactgtccttcgataactttccgcctgtcgaactaaaacacacgctttcgagta-tctc 7225  T
Q  298 catcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggc 397  Q
    || ||||||||||||||||||| || ||||| ||||||| |||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  7224 cagcaagtccaacttcgatagg-aatgagaagacaattttttcgatgataaggtcaacttattttgactgcattaaatgatagcctttaaaaatattggc 7126  T
Q  398 taacac 403  Q
    ||||||    
T  7125 taacac 7120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 3 - 404
Target Start/End: Complemental strand, 3794 - 3411
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactattt 101  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||| |||| | ||||||||||||||| ||    
T  3794 caacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgatagaattgtgacccattttccctagggaaaactactactt 3695  T
Q  102 atacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttgaa 201  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  3694 atacaaatagaaataactgcctagatttgaattaaaaactataactgcagtaaactaacgacacttatccatttgatttgaatttcgaatgtgtcttgaa 3595  T
Q  202 aatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttcatc 301  Q
    ||                 |||||||||||  |||| |||||||||||||||||||||| | ||||||||||| ||||||||||| ||||| |||||| |    
T  3594 aa-----------------tatctgaatcacaacaaaaattgtccttcgataactttccacctgtcgaactaaaacacacgctttcgagta-ttttcagc 3513  T
Q  302 aagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaac 401  Q
    ||||| || ||||||||| |  |||||||||||||||| |||||| ||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  3512 aagtctaagttcgatagg-agtgagaaaacaatttctttgatgattaggtcaacctattttgactatattaaatgataacctttaaaaatattggctaac 3414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 200; Significance: 1e-109; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 399
Target Start/End: Complemental strand, 40932983 - 40932585
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    ||||||||||||||||||| |||||| ||||| |||| |||||| || |||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  40932983 tgcaacttgtgactcgtttatctcttccatgcagataatttgagtgttagttttttgtatgatagaattgtgaccctttttccctagggaaaactactat 40932884  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| |    
T  40932883 ttatacaaattgaaataactgtctagatttgaatctaaaactataactacagtaaactaacgatacttatccattcgatttgaatttcgaatgtgtctgg 40932784  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttca 299  Q
    ||||||||  ||  ||||||||||| ||| ||  |||| || |||| |||||||||||| ||| ||||| |||||  ||| ||||||  || | ||||||    
T  40932783 aaaatatctgttacttgaccttatccgaaccacaacaaaaactgtcattcgataacttttcgcctgtcggactaaatcacgcgctttcaagca-ttttca 40932685  T
Q  300 tcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 399  Q
     ||||||||| ||||||| ||| | | |||||||| |||||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||||||    
T  40932684 gcaagtccaatttcgatatgaatgaaaaaaacaatctcttcgatgacaaggtcgacctattttgactgcattaaatgataacttttaaaaatattggcta 40932585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 10624409 - 10624181
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc--tagggaaaactacta 98  Q
    ||||||||||||||| ||| |||||| |||||||||| |||||| |||||||||| |||||||||| ||||||||||||||||  |||| ||||||||||    
T  10624409 tgcaacttgtgactcatttatctcttccatgcggataatttgagtgtaagttttt-gtatgatagaattgtgacccttttttccctaggaaaaactacta 10624311  T
Q  99 tt----tatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtg 194  Q
    ||    ||||||||||||||||||||| || |||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  10624310 ttaatttatacaaatagaaataactgcctatatttgaatttaaaactataactgcagtaa-ctaacgaaacttatccattcgatttgaatttcgaatgtg 10624212  T
Q  195 tcttgaaaatatccattg-tttgaccttatc 224  Q
    |||||||||||||| ||| ||||||||||||    
T  10624211 tcttgaaaatatccgttgttttgaccttatc 10624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 18156248 - 18156023
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||| |  |||||||| ||||| | |||| ||| |||||||    
T  18156248 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgaccttttttccttaggaaaagctactat 18156149  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcga-tttgaatttcgaatgtgtctt 198  Q
    |||||||||||||||||||||| ||||||| ||| ||||||||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  18156148 ttatacaaatagaaataactgcctagatttaaatttaaaactataaatgcagt-aactaacgaaacttatccattcgattttgaatttcgaatgtgtctt 18156050  T
Q  199 gaaaatatccattg-tttgaccttatc 224  Q
    ||||||| || ||| ||||||||||||    
T  18156049 gaaaataaccgttgttttgaccttatc 18156023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 20024483 - 20024673
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| || |||||||||||||| | || |  ||||||||||    
T  20024483 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaag-tttttgtatgattgaattgtgaccctttttccttaagagaaactactat 20024581  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatg 192  Q
    ||||||| |||||||||||||| ||||||||  | ||||||||||||||||| |||||||| || |||| ||||| |||||||||||| ||||    
T  20024582 ttatacagatagaaataactgcctagatttg-gtttaaaactataactgcagaaaactaactaatcttagccatttgatttgaatttcaaatg 20024673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 16832213 - 16832018
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctaggga-aaactactat 99  Q
    ||||||||||||||||||||||||||  ||||||||| |||||| ||||||||| |||||||| |  |||||| |   ||  || | || ||||||||||    
T  16832213 tgcaacttgtgactcgtttctctcttcaatgcggataatttgagtgtaagttttgtgtatgattggattgtgatcacgttcccttgcgagaaactactat 16832114  T
Q  100 ttatacaaatagaaataactgcatag----atttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
    |||||| ||||||||||||| | |||    |||||||| | ||| || ||| ||   |||| ||||| ||||||||||||||||||||||||||||    
T  16832113 ttatactaatagaaataacttcctagctatatttgaatttgaaattacaacggctaaaaacgaacaacacttatccattcgatttgaatttcgaat 16832018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21530409 - 21530296
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||||||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | |||||| |||    
T  21530409 tgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttcta 21530310  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  21530309 tttatacaaataga 21530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 10624084 - 10624010
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    ||||||| ||||||| | |||||||||||| |||||| ||||| ||||||| |||||||||||||||||||||||    
T  10624084 aacaattccttcgattacaaggtcaacctactttgactgcatttaatgatagcctttaaaaatattggctaacac 10624010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 26274125 - 26274238
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  26274125 tgcaacttgtgactcgtttgtcacttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttcta 26274224  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  26274225 tttatacaaataga 26274238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21504742 - 21504629
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  21504742 tgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttcta 21504643  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  21504642 tttatacaaataga 21504629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 21982641 - 21982753
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||  ||||| ||| | ||||||||||    
T  21982641 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctatttttcctaagaaaaactacta 21982740  T
Q  99 tttatacaaatag 111  Q
    |||||| ||||||    
T  21982741 tttatataaatag 21982753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 329 - 403
Target Start/End: Complemental strand, 18155926 - 18155852
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    ||||||| ||||||| | || ||||||||| |||||| ||||| ||||||| |||| ||||||||||||||||||    
T  18155926 aacaattccttcgattacaatgtcaacctactttgactgcatttaatgatatccttaaaaaatattggctaacac 18155852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20506347 - 20506460
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||  |||||| || | ||||||||||    
T  20506347 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacctgtttttcctaagaaaaactacta 20506446  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  20506447 tttatacaaataga 20506460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 19212452 - 19212406
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc 75  Q
    |||||||||||||||| ||||||||||| |||||| || ||||||||    
T  19212452 atgcggatagtttgagtgtaagttttttatatgattgaattgtgacc 19212406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 1 - 403
Target Start/End: Original strand, 1436 - 1836
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| || |||||||||||||| || ||| |||||||||||    
T  1436 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgacttgtgaccctttttccttaggaaaaactactat 1535  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||| |||||||||||||| |  | |||||||||||||||||||||||||||||||||    
T  1536 ttatacaaatagaaataactacctagatttgaatttaaaactataattgcagtaaactaacgatgcatatccattcgatttgaatttcgaatgtgtcttg 1635  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttca 299  Q
     ||||||   ||| ||||||||||||||| ||  | || || |  | |||||||||||| ||| ||||||||| | | ||  ||||  ||||| ||| ||    
T  1636 gaaatatttgttgcttgaccttatctgaacca-taaaaaaacttcctttcgataacttttcgcttgtcgaactgaaagacgtgcttccgagta-tttcca 1733  T
Q  300 tcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggcta 399  Q
     ||||||||||||||||| | || |||| |||| || ||||||  | ||||||||||||||||||| | |||  |||||| |||||||||||||||||||    
T  1734 gcaagtccaacttcgataag-aatgagagaacagttccttcgaatacaaggtcaacctattttgactgaatttgatgatagcctttaaaaatattggcta 1832  T
Q  400 acac 403  Q
    ||||    
T  1833 acac 1836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 40342884 - 40343274
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| || |||||||| |||||   || |||||||||||||    
T  40342884 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccacttttcattaaggaaaactactat 40342983  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||||||| | |||||||||||  ||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  40342984 ttatacaaatagaaataactacctagatttgaattcaaaactataactgtagtaaactaacaatacttattcattcgatttgaatttcgaatgtgtcttg 40343083  T
Q  200 aaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataac-tttccgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    ||||||||  ||| ||||||||||| |         || |  || ||||||||||| ||| | |  |||||||||| |||| || ||| ||| | |||||    
T  40343084 aaaatatcggttgcttgaccttatccg---------aaaacctgcccttcgataactttttcacccgtcgaactaaaacacgcgttttcgagca-ttttc 40343173  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggct 398  Q
    | ||||||||||||||||| |||   ||| ||||||||||||||| | |||||||||||||||| || || || ||||||| ||||||||||||||||||    
T  40343174 agcaagtccaacttcgatacgaa---agagaacaatttcttcgatcacaaggtcaacctattttaactgcgtttaatgatagcctttaaaaatattggct 40343270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 10827827 - 10828053
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc---tagggaaaactact 97  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||| |   |||||||||||||||   ||||||||||||||    
T  10827827 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaactact 10827926  T
Q  98 atttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtct 197  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  10827927 atttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcaatttgaatttcgaatgtgtct 10828025  T
Q  198 tgaaaatatccattg-tttgaccttatc 224  Q
    ||||||||| | ||| ||||||||||||    
T  10828026 tgaaaatattcgttgttttgaccttatc 10828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 11021619 - 11021845
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc---tagggaaaactact 97  Q
    |||||||||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||| |   |||||||||||||||   ||||||||||||||    
T  11021619 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttgtgtatgattggactgtgacccttttttcccttagggaaaactact 11021718  T
Q  98 atttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtct 197  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||    
T  11021719 atttatacaaatagaaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcaatttgaatttcgaatgtgtct 11021817  T
Q  198 tgaaaatatccattg-tttgaccttatc 224  Q
    ||||||||| | ||| ||||||||||||    
T  11021818 tgaaaatattcgttgttttgaccttatc 11021845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 97 - 402
Target Start/End: Original strand, 13346726 - 13347029
Alignment:
Q  97 tatttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtc 196  Q
    |||||||||||||||||||||||   ||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  13346726 tatttatacaaatagaaataactatctagatttgaatttaaaactataactgcaggaaactaacaatacttatccattcgatttgaatttcgaatgtgtc 13346825  T
Q  197 ttgaaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataac-tttccgcatgtcgaactaacacacacgcttttgagtattt 295  Q
    ||| ||||||   ||  ||||| ||||| ||| ||  |||| || || ||||| ||||| |||  ||  ||| |||||| |||| |||||| ||| | ||    
T  13346826 ttggaaatatttgttacttgactttatccgaaccacaacaa-aactgcccttcaataacttttttgcccgtcaaactaaaacacgcgctttcgagca-tt 13346923  T
Q  296 ttcatcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattg 395  Q
    |||| ||||||||||||||||| | || |||||||||||||||||||||| |||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  13346924 ttcagcaagtccaacttcgataag-aatgagaaaacaatttcttcgatgacaaggtcaatctattttgactgcattaaatgatagcctttaaaaatattg 13347022  T
Q  396 gctaaca 402  Q
    |||||||    
T  13347023 gctaaca 13347029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 207
Target Start/End: Original strand, 24876397 - 24876605
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt--ctagggaaaactacta 98  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| || |||||||||||||||  ||||||||||||||||    
T  24876397 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgaccctttttttcctagggaaaactacta 24876496  T
Q  99 tttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    |||||||||||||| | | || | ||||||||||| | ||| |||||||| || |||||||| | |||||||||||||||||||||||||||||||||||    
T  24876497 tttatacaaatagataaagcttcctagatttgaatttgaaattataactgtagaaaactaactatacttatccattcgatttgaatttcgaatgtgtctt 24876596  T
Q  199 gaaaatatc 207  Q
    |||||||||    
T  24876597 gaaaatatc 24876605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 87 - 224
Target Start/End: Complemental strand, 10864184 - 10864047
Alignment:
Q  87 ggaaaactactatttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaattt 186  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  10864184 ggaaaactactatttatacaaatagaaataactgtctagatttgaatttaaaactataactgcagt-aactaacaaaacttatccattcgaattgaattt 10864086  T
Q  187 cgaatgtgtcttgaaaatatccattg-tttgaccttatc 224  Q
    | |||||||||||||||||| | ||| ||||||||||||    
T  10864085 caaatgtgtcttgaaaatattcgttgttttgaccttatc 10864047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 18752753 - 18752572
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    ||||||||||||||| ||||||  || ||| |||||| ||||||||||||||||  ||||||| || |||||||||||||||| ||   |||| ||||||    
T  18752753 tgcaacttgtgactcatttctcgattccatacggataatttgagcgtaagtttt--gtatgattgaattgtgacccttttttcctaaaaaaaattactat 18752656  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttc 187  Q
    |||||||||||||||||||||  ||||||||||    ||||||||||||||| |||||||| || |||| |||| |||||||||||||    
T  18752655 ttatacaaatagaaataactgtctagatttgaa----aaactataactgcagaaaactaactaatcttagccatacgatttgaatttc 18752572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 41239259 - 41239358
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaactactatttata 104  Q
    |||||| ||||||||||||||   || ||||||||||||||||||||||| |||||||| || |||||||||||||||||| | ||||||| ||||||||    
T  41239259 acttgttactcgtttctctctga-atccggatagtttgagcgtaagttttatgtatgattgaattgtgacccttttttctatgaaaaactagtatttata 41239357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 329 - 403
Target Start/End: Original strand, 24876718 - 24876792
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    ||||||||||||||| | |||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||    
T  24876718 aacaatttcttcgattacaaggtcaacctattttaaccgtatttaatgatagcctttaaaaatattggctaacac 24876792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11989427 - 11989536
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||| |||||||||| || ||| ||| |||||||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  11989427 tgcaacttatgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 11989526  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  11989527 tttatacaaa 11989536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14035899 - 14036011
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  14035899 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactacta 14035998  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  14035999 tttatacagatag 14036011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14345929 - 14346041
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  14345929 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgagttgtgacccttttttcctaagaaaaactacta 14346028  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  14346029 tttatacagatag 14346041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 44277698 - 44277810
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||  || ||||||||| ||||||||| | ||||||||||    
T  44277698 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgactgaattgtgacccattttttctaagaaaaactacta 44277797  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  44277798 tttatacagatag 44277810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 10828149 - 10828222
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    ||||| | ||||||| | |||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||    
T  10828149 aacaaatccttcgattacaaggtcaacctactttgactgcatttaatgataccctttaaaaatattggctaaca 10828222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 11021941 - 11022014
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    ||||| | ||||||| | |||||||||||| |||||| ||||| ||||||| ||||||||||||||||||||||    
T  11021941 aacaaatccttcgattacaaggtcaacctactttgactgcatttaatgataccctttaaaaatattggctaaca 11022014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14323736 - 14323848
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||| ||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  14323736 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgagttgtgacccttttttcctaagaaaaactacta 14323835  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  14323836 tttatacagatag 14323848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18174893 - 18175000
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || || |||  |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  18174893 tgcaacttgtgactcgtttgtcgctctcacacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 18174992  T
Q  99 tttataca 106  Q
    ||||||||    
T  18174993 tttataca 18175000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1978250 - 1978363
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||||||| |||| | | ||||| |||| ||||  ||||||| || ||||||||| |||| | || | ||||||||||    
T  1978250 tgcaacttgtgactcgtttgtcgctttcatacggacaatattgagtgtaaattttgagtatgattgaattgtgacccgttttccctaagaaaaactacta 1978349  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  1978350 tttatacaaataga 1978363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 402
Target Start/End: Complemental strand, 10863952 - 10863879
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    ||||||| ||||||| | |||||||||||| ||||||  |||| ||||||| || |||||||||||||||||||    
T  10863952 aacaattccttcgattacaaggtcaacctactttgactacatttaatgatacccattaaaaatattggctaaca 10863879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15758664 - 15758551
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| | | ||||| |||||||||  ||||||| || |||||||| |||||| ||| | ||||||||||    
T  15758664 tgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactacta 15758565  T
Q  99 tttatacaaataga 112  Q
    |||||||| |||||    
T  15758564 tttatacagataga 15758551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 18115255 - 18115366
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||||||||| ||| | ||||||||||    
T  18115255 tgcaacttgtaactcgtttgtcacttccatacggacagtattgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactacta 18115353  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  18115354 tttatacagatag 18115366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 18141823 - 18141934
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||||||||| ||| | ||||||||||    
T  18141823 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttta-gtatgattgaattgtgacccttttttcctaagaaaaactacta 18141921  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  18141922 tttatacagatag 18141934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 10478226 - 10478303
Alignment:
Q  5 acttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc 83  Q
    |||||| ||||||||||||||   ||| |||||||||||| ||||||||| |||||| | || ||||||||| ||||||    
T  10478226 acttgtaactcgtttctctctaa-atgtggatagtttgagtgtaagttttctgtatggttgaattgtgacccgtttttc 10478303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 16713315 - 16713400
Alignment:
Q  12 actcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaactacta 98  Q
    ||||||||||||||   |||| ||||||||||| ||| ||||| |||||||| || ||||||||||||||  || | ||||||||||    
T  16713315 actcgtttctctctga-atgcagatagtttgagtgtacgttttctgtatgattgaattgtgaccctttttggtatgaaaaactacta 16713400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 98
Target Start/End: Original strand, 17687551 - 17687636
Alignment:
Q  12 actcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaactacta 98  Q
    ||||||||||||||   |||| ||||||||||| ||| ||||| |||||||| || ||||||||||||||  || | ||||||||||    
T  17687551 actcgtttctctctga-atgcagatagtttgagtgtacgttttctgtatgattgaattgtgaccctttttggtatgaaaaactacta 17687636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 18160123 - 18160197
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgac 74  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || |||||||    
T  18160123 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgac 18160197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 155; Significance: 4e-82; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 1 - 351
Target Start/End: Original strand, 18258137 - 18258488
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||| |  || ||||||||||||||| ||| |||||||||||||    
T  18258137 tgcaacttgtgactcgtttctctctttcatgcggataatttgagtgtaacttttttgtattaatgaattgtgaccctttttttctaaggaaaactactat 18258236  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||||||||    
T  18258237 ttatacaaatagaaataactgcctagatttgaatttaaaactataactgcaatatactaactatacttatccattcgatttgaatttcgaatgtgtcttg 18258336  T
Q  200 -aaaatatccattg-tttgaccttatctgaat-cagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttt 296  Q
     |||||| || ||| ||||||||||||| ||| ||  |||| || || |||| |||||||||| |  ||||||||  | |||| |||||| ||||| | |    
T  18258337 aaaaatacccgttgctttgaccttatctaaatccataacaa-aactgccctttgataactttctgtctgtcgaaccgaaacacgcgctttcgagta-tct 18258434  T
Q  297 tcatcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggt 351  Q
     || ||||||||||||||||||| || ||||| |||| |||||||||||||||||    
T  18258435 ccaacaagtccaacttcgatagg-aatgagaagacaacttcttcgatgataaggt 18258488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 404
Target Start/End: Complemental strand, 11794205 - 11793802
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||||||| |||||| | |||| |||||||||| |||||| |||| |||||||||| || || |||||||||||||||| || |||||||||||||    
T  11794205 tgcaacttgtgattcgtttatatcttccatgcggataatttgagtgtaaattttttgtataattgaattgtgacccttttttcctatggaaaactactat 11794106  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagt-aaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    ||||||| |||||||||||||| || |||||||| |||||||||||||||| | |||||||| | | ||||||||||||||| |||||||||||||||||    
T  11794105 ttatacatatagaaataactgcctacatttgaatttaaaactataactgcaataaaactaactacatttatccattcgatttaaatttcgaatgtgtctt 11794006  T
Q  199 gaaaatatccattgtttgaccttatctgaatcagcacaagaattgtccttcgataactttccgcatgtcgaactaacacacacgcttttgagtatttttc 298  Q
    |||||||||| ||| |||||| ||| || |||  ||  | ||  | ||||||||||| ||| |  | ||||||| | |||||||  || ||||| | | |    
T  11794005 gaaaatatccgttgcttgaccctatttg-atccccaacaaaaccgcccttcgataaccttctgtctctcgaactgaaacacacgtattcgagta-tctcc 11793908  T
Q  299 atcaagtccaacttcgataggaaaggagaaaacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctt-taaaaatattggc 397  Q
    | | | ||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  11793907 agcgaatccaacttcaata-gaaacgagaagacaatttcttcgatgataaggtcaacctattttgactgcattaaatgataaccttaaaaaaatattggc 11793809  T
Q  398 taacaca 404  Q
    |||||||    
T  11793808 taacaca 11793802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 16597278 - 16597486
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    |||||||||| |||||||||| |||| |||||||||| |||||| ||||||||||| |||||| |  |||| |||  |||| || ||| ||||||||||     
T  16597278 tgcaacttgtcactcgtttctttcttccatgcggataatttgagtgtaagttttttatatgattggattgtcacctgttttccttaggaaaaactactac 16597377  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
     ||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||| ||||    
T  16597378 gtatacaaatagaaataactacctagatttgaatttaaaactataactgtagtaaactaacaacacttatccatttgatttgaatttcgaatgtgccttg 16597477  T
Q  200 aaaatatcc 208  Q
     ||||||||    
T  16597478 caaatatcc 16597486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 26460618 - 26460809
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctaggga-aaactactat 99  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| ||||||||| |||||||| |  ||||||||  |||  || | || ||||||||||    
T  26460618 tgcaacttgtgactcgtttatctcttccatgcggataatttgagtgtaagttttgtgtatgattggattgtgaccactttcccttgcgagaaactactat 26460717  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaat 191  Q
    |||||| ||||||||||||| | || |||||||| | |||||| ||||||  ||||||||||| ||||||||||||||||||||||||||||    
T  26460718 ttatactaatagaaataactacctatatttgaatttgaaactacaactgctataaactaacaatacttatccattcgatttgaatttcgaat 26460809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 19272343 - 19272503
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctaggga-aaactactat 99  Q
    |||||||||||||||||||||||||| ||||| |||| |||||| ||||||||| |||||||| |  |||||||| |||| ||| | || ||||||||||    
T  19272343 tgcaacttgtgactcgtttctctcttccatgcagataatttgagtgtaagttttgtgtatgattggattgtgaccgttttctcttgcgagaaactactat 19272442  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaac 160  Q
    |||||| |||||| |||||| | ||  ||||||| |||||||| ||||||  |||||||||    
T  19272443 ttatactaatagacataactacctatgtttgaatttaaaactacaactgctataaactaac 19272503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19405814 - 19405926
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  19405814 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 19405913  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  19405914 tttatacaaatag 19405926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23496653 - 23496542
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||||||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  23496653 tgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 23496554  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  23496553 tttatacaaata 23496542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23491055 - 23490944
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  23491055 tgcaacttgtgactcgtttgtcgcttccatacggaaagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 23490956  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  23490955 tttatacaaata 23490944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19025418 - 19025529
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  19025418 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttcta 19025517  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  19025518 tttatacaaata 19025529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 16209898 - 16209785
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| |||  ||| ||| ||||| |||||||||| ||||||| ||  |||||||| |||||| || | ||||||||||    
T  16209898 tgcaacttgtgactcgtttgtcgcttccatatggacagtattgagtgtaagtttttagtatgattgaactgtgacccgtttttcctaagaaaaactacta 16209799  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  16209798 tttatacaaataga 16209785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30755557 - 30755670
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| | | ||||| |||||||||  ||||||| || ||||||||| |||||| || | ||||||||||    
T  30755557 tgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactacta 30755656  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  30755657 tttatacaaataga 30755670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19038461 - 19038572
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| | | ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  19038461 tgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcttaagaaaaacttcta 19038560  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  19038561 tttatacaaata 19038572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23432015 - 23431904
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| || | | | ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  23432015 tgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 23431916  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  23431915 tttatacaaata 23431904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 1557711 - 1557824
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| | | ||||| |||||||||  ||||||| || |||||||| |||||| ||| | ||||||||||    
T  1557711 tgcaacttgtgactcgtttgtcgcttccatacggacaatattgagtgtaagttttgagtatgattgaattgtgacctctttttcctaagaaaaactacta 1557810  T
Q  99 tttatacaaataga 112  Q
    |||||||| |||||    
T  1557811 tttatacagataga 1557824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 401
Target Start/End: Original strand, 16597641 - 16597682
Alignment:
Q  360 tttgaccgcattaaatgataacctttaaaaatattggctaac 401  Q
    |||||| ||||| ||||||| |||||||||||||||||||||    
T  16597641 tttgactgcatttaatgatagcctttaaaaatattggctaac 16597682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 150; Significance: 4e-79; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 14176 - 14399
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||| ||||||| || |||||||||||||| || |||||||||||||||    
T  14176 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgattgaattgtgaccctttttccttagggaaaactactat 14274  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||||||| ||||||||||||| |||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14275 ttatacaactagaaataactgcctagattcgaatttaaaactataactgcagtaa-ctaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 14373  T
Q  200 aaaatatccattg-tttgaccttatc 224  Q
    ||||||||| ||| ||||||||||||    
T  14374 aaaatatccgttgttttgaccttatc 14399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 14496 - 14569
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    ||||||| ||| ||| | ||||||||| ||||||||| ||||| ||||||| ||||||||||||||||||||||    
T  14496 aacaattcctttgattacaaggtcaacttattttgactgcatttaatgatagcctttaaaaatattggctaaca 14569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 9e-74; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 18567038 - 18567260
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaactactatt 100  Q
    |||||||||||||||||||||||||| ||||||| || |||||| ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  18567038 tgcaacttgtgactcgtttctctcttccatgcgggtaatttgagtgtaagtttt-tgtatgatagaattgtgacctttttttctagggaaaactactatt 18567136  T
Q  101 tatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttga 200  Q
    ||||||||||||||||| ||| ||||||||||| |||||| |||| |||||| ||||||| |||||||||||||| |||||||||||||||| |||||||    
T  18567137 tatacaaatagaaataattgcctagatttgaatttaaaacaataattgcagt-aactaacgaaacttatccattcaatttgaatttcgaatgcgtcttga 18567235  T
Q  201 aaatatccattg-tttgaccttatc 224  Q
    |||||||| ||| ||||||||||||    
T  18567236 aaatatccgttgttttgaccttatc 18567260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 10267325 - 10267102
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    |||||||||||| ||||||||||||| |||||||||| |||||| |||||||||| ||||||| || || |||||  |||| || |||||||||||||||    
T  10267325 tgcaacttgtgattcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgattgaattttgaccacttttccttagggaaaactactat 10267227  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    ||||||||||| ||| |||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||    
T  10267226 ttatacaaataaaaacaactgcctagattcgaatttaaaactataactgcagt-aactaacaaaacttatccattcgatttgaattctgaatgtgtcttg 10267128  T
Q  200 aaaatatccattg-tttgaccttatc 224  Q
    |||||  || ||| ||||||||||||    
T  10267127 aaaattaccgttgttttgaccttatc 10267102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 184
Target Start/End: Complemental strand, 1658689 - 1658509
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc--tagggaaaactacta 98  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||||||| |||||||||| ||||||| ||||||||  || |||||||||||     
T  1658689 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttt-gtatgatagaattgtgacacttttttccctaaggaaaactactg 1658591  T
Q  99 tttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaat 184  Q
    ||||||||||    ||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1658590 tttatacaaa----aataactgcctagatttgaatttaaaactataactgcagtaaactaacgaaacttatccattcgatttgaat 1658509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 31079793 - 31079998
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc---tagggaaaactact 97  Q
    ||||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| || ||||||||| ||||||   | | | ||||||||    
T  31079793 tgcaatttgtgactcgtttctctcttccatgcggataatttgagtgtaagttttttgtatgattgaattgtgacccctttttcctttggaggaaactact 31079892  T
Q  98 atttatacaaatagaaataactgcatagatttgaatct-aaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtc 196  Q
    |||||||||||||||||||||||| ||   || ||| | ||||||||||||||||| ||| |||| |||||||||||||  |||||||||||||||||||    
T  31079893 atttatacaaatagaaataactgcctaagcttaaatttaaaaactataactgcagt-aaccaacagaacttatccattcagtttgaatttcgaatgtgtc 31079991  T
Q  197 ttgaaaa 203  Q
    || ||||    
T  31079992 ttaaaaa 31079998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 187
Target Start/End: Original strand, 3077978 - 3078158
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactattt 101  Q
    ||||||||| |||||||||  ||| ||| |||||| ||||||| ||||||||| ||||||| || |||||||| |||||| ||| | |||||||||||||    
T  3077978 caacttgtggctcgtttcttgcttccatacggataatttgagcttaagttttt-gtatgattgaattgtgaccttttttttctaagaaaaactactattt 3078076  T
Q  102 atacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttc 187  Q
    |||||||||| ||||||||| |||||||||    ||||||||||| | || |||||||| || ||||  |||  ||||||||||||    
T  3078077 atacaaataggaataactgcctagatttga----aaaactataaccgtagaaaactaactaatcttagtcatatgatttgaatttc 3078158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 49526495 - 49526616
Alignment:
Q  1 tgcaacttgtgactcgtttctctcttt-catgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc--tagggaaaactact 97  Q
    |||||||||||||||||||||||||||  |||||||||||||||  ||||||||| |||||||| |  |||| ||||||||| |   ||| |||||||||    
T  49526495 tgcaacttgtgactcgtttctctctttgaatgcggatagtttgattgtaagttttgtgtatgattggattgtcaccctttttccctaaggaaaaactact 49526594  T
Q  98 atttatacaaatagaaataact 119  Q
    |||||||  |||||||| ||||    
T  49526595 atttatattaatagaaaaaact 49526616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 14556959 - 14557071
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||| ||||| ||||||| || ||||||||  ||||||||| | ||||||||||    
T  14556959 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgattgaattgtgacctgttttttctaagaaaaactacta 14557058  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  14557059 tttatacaaatag 14557071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15153647 - 15153759
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||| ||||| ||||||| || ||||||||  ||||||||| | ||||||||||    
T  15153647 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaattttttagtatgatcgaattgtgacctgttttttctaagaaaaactacta 15153746  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  15153747 tttatacaaatag 15153759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 18108795 - 18108683
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  18108795 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 18108696  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  18108695 tttatacagatag 18108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 402
Target Start/End: Original strand, 18567357 - 18567430
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    ||||||| ||||||| | |||||||||||| |||||| ||||| ||||||| ||||||||||||||| ||||||    
T  18567357 aacaattccttcgattacaaggtcaacctactttgactgcatttaatgatagcctttaaaaatattgactaaca 18567430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13277250 - 13277361
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||| ||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||  |||||| || | ||||||||||    
T  13277250 tgcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactacta 13277349  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  13277350 tttatacaaata 13277361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 50687637 - 50687558
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc 83  Q
    |||||||||||||||| ||||||  ||||||||||  |||| ||||||||| |||||||| | |||||||||| ||||||    
T  50687637 aacttgtgactcgtttgtctcttgaatgcggatagcctgagtgtaagttttgtgtatgattggtttgtgacccgtttttc 50687558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13292628 - 13292739
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||| ||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || |||||||   |||||| || | ||||||||||    
T  13292628 tgcaactcgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacatgtttttcctaagaaaaactacta 13292727  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  13292728 tttatacaaata 13292739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 14022497 - 14022567
Alignment:
Q  39 tttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactatttatacaaa 108  Q
    |||||| |||||||||| ||||||| || ||||||||||||||| |||   ||||||||||||||||||||    
T  14022497 tttgagtgtaagtttttagtatgattgaattgtgacccttttttcctaaaaaaaactactatttatacaaa 14022567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14714175 - 14714278
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| || || |||| ||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  14714175 tgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 14714274  T
Q  99 ttta 102  Q
    ||||    
T  14714275 ttta 14714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 14775855 - 14775958
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| || || |||| ||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  14775855 tgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 14775954  T
Q  99 ttta 102  Q
    ||||    
T  14775955 ttta 14775958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 250113 - 250337
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaa-ctactat 99  Q
    |||||||||||||||||||||| ||| |||  ||||| |||||| ||||||||| |||||||| |  ||||||||  |||| || ||||||| |||||||    
T  250113 tgcaacttgtgactcgtttctcgcttccatatggataatttgagtgtaagttttgtgtatgattggattgtgaccacttttccttgggaaaaactactat 250212  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    ||||||||||  |||||||| | |||||| ||||  ||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| | ||||    
T  250213 ttatacaaatcaaaataactacctagattcgaattcaaacctataactgcagtaaactaacaagtcttatccattcgatttgaatttcgaatgcgccttg 250312  T
Q  200 aaaatatccattgtttgaccttatc 224  Q
     ||||||||||||||||||||||||    
T  250313 gaaatatccattgtttgaccttatc 250337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 36425 - 36201
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||| ||| || ||| | |||| |||||||| || |  ||||  |||||||| |  || ||||||||||||    
T  36425 tgcaacttgtgactcgtttctctcttccatgcgaataattagagtgaaagtattttgtattattggattgtagccctttttccccagcgaaaactactat 36326  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtcttg 199  Q
    |||| ||||||  ||||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||    
T  36325 ttatgcaaatattaataactgcctagatttgaatttaaaactataactgcagt-aactaacgaaacttatccattcgatttgaatttcgaatatgtcttg 36227  T
Q  200 aaaatatccattg-tttgaccttatc 224  Q
    ||| ||||| ||| ||||||||||||    
T  36226 aaattatccgttgttttgaccttatc 36201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 394
Target Start/End: Complemental strand, 36104 - 36039
Alignment:
Q  329 aacaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatatt 394  Q
    ||||||| ||||||| | ||| |||||||| |||||| ||||||||||||| ||||||||||||||    
T  36104 aacaattccttcgattacaagatcaacctactttgactgcattaaatgatagcctttaaaaatatt 36039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 70739 - 70533
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtga-cccttttttctagggaaaactactat 99  Q
    |||||||||||||||||||||||||| |||||||||| |||||| |||||| ||||||||||| || |||||| || ||||  ||| |||||||||||||    
T  70739 tgcaacttgtgactcgtttctctcttccatgcggataatttgagtgtaagtattttgtatgattgaattgtgatccgttttccctatggaaaactactat 70640  T
Q  100 ttatacaaatagaaataactgcatagatttgaa-tctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgtgtctt 198  Q
    |||||||||||||||||||||| |||||| ||| | |||||||||||| ||| |||  |||||||| |||| |||||| |||||| ||||||||||| ||    
T  70639 ttatacaaatagaaataactgcctagattcgaattttaaaactataaccgcaataacttaacaaaagttattcattcgttttgaaattcgaatgtgtttt 70540  T
Q  199 gaaaata 205  Q
    || ||||    
T  70539 gagaata 70533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 400
Target Start/End: Complemental strand, 70398 - 70346
Alignment:
Q  347 aaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaa 400  Q
    ||||||||||||||||||| | ||||||||||  |||| |||||||||||||||    
T  70398 aaggtcaacctattttgactgtattaaatgat-gccttcaaaaatattggctaa 70346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0770 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 3732 - 3923
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||| ||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| || |||||||||||||| | || |  |||||| |||    
T  3732 tgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaag-tttttgtatgattgaattgtgaccctttttacttaagagaaactaatat 3830  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgt 193  Q
    |||||||||||||||||||||| ||||||||  |  |||||||||||||||| |||||||| || |||| ||||| |||||||||||| |||||    
T  3831 ttatacaaatagaaataactgcctagatttg-gttaaaaactataactgcagaaaactaactaatcttagccatttgatttgaatttcaaatgt 3923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 86; Significance: 6e-41; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 102036 - 102227
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    |||||||| ||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| || |||||||||||||| | || |  |||||| |||    
T  102036 tgcaacttttgactcgtttctctcttccatgcggataatttgagtgtaag-tttttgtatgattgaattgtgaccctttttccttaagagaaactattat 102134  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttcgaatgt 193  Q
    |||||||||||||||||||||| ||||||||  |  |||||||||||||||| |||||||| || |||| ||||| |||||||||||| |||||    
T  102135 ttatacaaatagaaataactgcctagatttg-gttaaaaactataactgcagaaaactaactaatcttagccatttgatttgaatttcaaatgt 102227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 9084 - 8903
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctaggga-aaactactat 99  Q
    |||||||||||||| ||||||||||| |||||||||| |||||  |||||||||| ||||||| || ||||||| |||||| ||   || ||||||||||    
T  9084 tgcaacttgtgacttgtttctctcttccatgcggataatttgaatgtaagttttt-gtatgattgaattgtgactctttttccttaagagaaactactat 8986  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaa 183  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||  |||||||| || |||| ||||  ||||||||    
T  8985 ttatacaaatagaaataactgcctagatttg-gtctaaaactataactgcataaaactaactaatcttagccatatgatttgaa 8903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 7528 - 7343
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaa-aactactat 99  Q
    |||||| |||||||||||| |||||| |||||||||| |||||| |||||||||  ||||||| || ||| ||||||| || ||   ||  ||| |||||    
T  7528 tgcaacatgtgactcgtttatctcttccatgcggataatttgagtgtaagtttt--gtatgattgaattgcgacccttattccttaagaggaacaactat 7431  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaatttc 187  Q
    |||||||||||||||||||||| ||||||||| |  |||||||||| ||||| |||||||| || |||| ||||||||||||||||||    
T  7430 ttatacaaatagaaataactgcctagatttgatttgaaaactataattgcagaaaactaactaatcttagccattcgatttgaatttc 7343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 402
Target Start/End: Complemental strand, 7186 - 7133
Alignment:
Q  348 aggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaaca 402  Q
    ||||||||||  |||||||| ||||||||||| || |||||||||||||||||||    
T  7186 aggtcaaccttctttgaccgtattaaatgatagcc-ttaaaaatattggctaaca 7133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 71; Significance: 6e-32; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 68139 - 68321
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| |||  ||||||||||||||||||||||| ||||||| || ||||||| ||||||| ||| | |||||||||||    
T  68139 tgcaacttgtgactcgtttatcgcttccataaggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactat 68238  T
Q  100 ttatacaaataga-aataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttg 181  Q
    ||||||||||||| ||||||| | ||| ||  ||| |||||||||||| |||| |||||| | || |||| |||| |||||||    
T  68239 ttatacaaatagagaataactacctagtttgaaatttaaaactataaccgcagaaaactacctaatcttagccatacgatttg 68321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 76244 - 76426
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| |||  ||||||||||||||||||||||| ||||||| || ||||||| ||||||| ||| | |||||||||||    
T  76244 tgcaacttgtgactcgtttatcgcttccataaggatagtttgagcgtaagtttttagtatgattgaattgtgactcttttttcctaagaaaaactactat 76343  T
Q  100 ttatacaaataga-aataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttg 181  Q
    ||||||||||||| ||||||| | ||| ||  ||| |||||||||||| |||| |||||| | || |||| |||| |||||||    
T  76344 ttatacaaatagagaataactacctagtttgaaatttaaaactataaccgcagaaaactacctaatcttagccatacgatttg 76426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 186
Target Start/End: Complemental strand, 200221 - 200040
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactat 99  Q
    ||||||||||||||| |||||| ||| |||  ||||| |||||| |||||||||| ||||||| || |||||||||||||||| || | ||||| |||||    
T  200221 tgcaacttgtgactcatttctcgcttccataaggataatttgagtgtaagttttt-gtatgattgaattgtgacccttttttcctaagaaaaacaactat 200123  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttgaattt 186  Q
    |||||||||||||||||||||  |||||| ||    |||||||||||||||| |||||||| || ||||  ||| ||||||||||||    
T  200122 ttatacaaatagaaataactgtctagattgga----aaaactataactgcagaaaactaactaatcttagtcatacgatttgaattt 200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 59; Significance: 8e-25; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 129262 - 129152
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactat 99  Q
    ||||||||||||||||||| || ||| |||  ||||||||||||||||| ||||| ||||||| || ||||||||||||||| ||| | |||||||||||    
T  129262 tgcaacttgtgactcgtttatcgcttccataaggatagtttgagcgtaaatttttagtatgattgaattgtgacccttttttcctaagaaaaactactat 129163  T
Q  100 ttatacaaata 110  Q
    |||||||||||    
T  129162 ttatacaaata 129152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 107518 - 107335
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc--tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| |||  ||||||| ||||||||||||||| ||||||| || |||||||| |||||||   ||  |||| |||||    
T  107518 tgcaacttgtgactcgtttatcgcttccataaggatagtctgagcgtaagtttttagtatgattgaattgtgacctttttttcctaagaaaaaaatacta 107419  T
Q  99 tttatacaaataga-aataactgcatagatttgaatctaaaactataactgcagtaaactaacaaaacttatccattcgatttg 181  Q
    |||||||||||||| ||||||| | ||| ||  ||| |||||||||||| |||| |||||| | || |||| |||| |||||||    
T  107418 tttatacaaatagagaataactacctagtttgaaatttaaaactataaccgcagaaaactacctaatcttagccatacgatttg 107335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 33371 - 33477
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactattt 101  Q
    ||||||||||||||||| || ||| |||  ||||||||||||||||||||||| ||||||| || ||||||||| ||||| ||| | |||||||||||||    
T  33371 caacttgtgactcgtttatcgcttccatatggatagtttgagcgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactactattt 33470  T
Q  102 atacaaa 108  Q
    |||||||    
T  33471 atacaaa 33477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 119
Target Start/End: Original strand, 8815 - 8931
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactattta 102  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||||||| |||||||| |  ||||||||| |||| | || ||||||||||||||||    
T  8815 aacttgtgactcgtttctctcttgaatgtggatagtttgagtgtaagttttgtgtatgattggattgtgacccgttttccttatggaaaactactattta 8914  T
Q  103 tacaaatagaaataact 119  Q
    ||| |  ||||||||||    
T  8915 tactagaagaaataact 8931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 8109 - 8221
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||||||| | ||||||||||    
T  8109 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactacta 8208  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  8209 tttatacaaatag 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15239 - 15351
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||||||| | ||||||||||    
T  15239 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgttttttctaagaaaaactacta 15338  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  15339 tttatacaaatag 15351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 53; Significance: 3e-21; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 6687 - 6799
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtga-cccttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||||||||||| || |||||| |||||||| ||| | ||||||||||    
T  6687 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgatccctttttcctaagaaaaactacta 6786  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  6787 tttatacaaatag 6799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 85107 - 84994
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| ||||||| || ||||||| || ||||||||| |||||| || | ||||||||||    
T  85107 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttcttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 85008  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  85007 tttatacaaataga 84994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 62246 - 62133
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||||| |||||| || ||| ||| |||| | | ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  62246 tgcaacttgtgattcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 62147  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  62146 tttatacaaataga 62133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 71424 - 71311
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||||| |||||| || ||| ||| |||| | | ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  71424 tgcaacttgtgattcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 71325  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  71324 tttatacaaataga 71311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22720 - 22608
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || || |||||| |||||| || | ||||||||||    
T  22720 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgatcgaattatgacccgtttttcctaagaaaaactacta 22621  T
Q  99 tttatacaaatag 111  Q
    |||| ||||||||    
T  22620 tttacacaaatag 22608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 151431 - 151543
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||||||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  151431 tgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagtttttagtatgattgaattgtgacccctttttcctaagaaaaactacta 151530  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  151531 tttatacaaatag 151543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0795 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 330 - 403
Target Start/End: Complemental strand, 2048 - 1975
Alignment:
Q  330 acaatttcttcgatgataaggtcaacctattttgaccgcattaaatgataacctttaaaaatattggctaacac 403  Q
    |||||| |||||||||||| ||||||| |||||||  |||||||||||||||| ||||||||||||||||||||    
T  2048 acaattccttcgatgataaagtcaacccattttgattgcattaaatgataacccttaaaaatattggctaacac 1975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1400 - 1251
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttctaggga-aaactactat 99  Q
    |||||||||||||||||||||||||| |||||| ||| |||||| ||||||||| |||||||| |  |||| |||  |||  || | || ||||||||||    
T  1400 tgcaacttgtgactcgtttctctcttccatgcgaataatttgagtgtaagttttgtgtatgattggattgtaaccactttcccttgagagaaactactat 1301  T
Q  100 ttatacaaatagaaataactgcatagatttgaatctaaaactataactgc 149  Q
    || ||| ||||||||||||| | || |||||||||| ||| || ||||||    
T  1300 ttttactaatagaaataactacctatatttgaatctgaaattacaactgc 1251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15816 - 15703
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||||||| ||||| |||||||||  ||||||| |||||||||||| ||||| ||| | ||||||||||    
T  15816 tgcaacttgtgactcgtttgtcgcttccatacggatagtattgagtgtaagttttgagtatgattgatttgtgacccgtttttcctaagaaaaactacta 15717  T
Q  99 tttatacaaataga 112  Q
    |||||| |||||||    
T  15716 tttatagaaataga 15703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1833 - 1721
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| |||||| ||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  1833 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagcataagtttttagtatgattgaattgtgacccatttttcctaagaaaaactacta 1734  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  1733 tttatacaaatag 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 45264 - 45376
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    |||||||||||||||||||  | ||| ||| |||| | | |||||||||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  45264 tgcaacttgtgactcgtttgccgcttccatacggacaatattgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 45363  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  45364 tttatacaaatag 45376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 30691 - 30579
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  30691 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 30592  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  30591 tttatacaaatag 30579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23128 - 23017
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  23128 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 23029  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  23028 tttatacaaata 23017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 44304 - 44197
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||||||| |||| | | ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  44304 tgcaacttgtgactcgtttgtcgctttcatacggacattattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 44205  T
Q  99 tttataca 106  Q
    ||||||||    
T  44204 tttataca 44197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11400 - 11291
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccct-tttttctagggaaaactacta 98  Q
    ||||||||||||||| ||| || ||| ||| |||| ||| |||||||||||||||| ||||||| || |||||||||| |||| |||  |||||||||||    
T  11400 tgcaacttgtgactcatttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgaccctgttttcctaaagaaaactacta 11301  T
Q  99 tttatacaaa 108  Q
    ||||||||||    
T  11300 tttatacaaa 11291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 8789 - 8902
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||  |||||| || | ||||||||||    
T  8789 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactacta 8888  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  8889 tttatacaaataga 8902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 25182 - 25069
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || | | ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  25182 tgcaacttgtgactcgtttgtcgcatccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactacta 25083  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  25082 tttatacaaataga 25069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 46298 - 46410
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  46298 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactacta 46397  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  46398 tttatacagatag 46410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 50936 - 51048
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  50936 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactacta 51035  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  51036 tttatacagatag 51048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 44; Significance: 7e-16; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 29373 - 29484
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatt 100  Q
    ||||||||||||||||| || ||||||| || | ||| ||||| |||||||||  ||||||| || ||||||||| |||||| || | ||||||||||||    
T  29373 caacttgtgactcgtttgtcgctttcatacgaacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactactatt 29472  T
Q  101 tatacaaataga 112  Q
    ||||||||||||    
T  29473 tatacaaataga 29484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 39959 - 39853
Alignment:
Q  2 gcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactactat 99  Q
    |||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||||||||||| || ||||||||  ||||| ||| | |||||||||||    
T  39959 gcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactactat 39860  T
Q  100 ttataca 106  Q
    |||||||    
T  39859 ttataca 39853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 28559 - 28671
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||  ||| ||| | |||||||||| ||||||| || || |||||| |||||| || | ||||||||||    
T  28559 tgcaacttgtgactcgtttgtcgcttccatacgggcagtattgtgtgtaagtttttagtatgattgaattatgacccctttttcctaagaaaaactacta 28658  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  28659 tttatacagatag 28671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 44291 - 44402
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||||||||||| || ||||||||  ||||| ||| | |||||| |||    
T  44291 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttttgtatgattgaattgtgacctgtttttcctaagaaaaactccta 44390  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  44391 tttatacaaata 44402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 58602 - 58491
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||  |||||| || | ||||||||||    
T  58602 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactacta 58503  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  58502 tttatacaaata 58491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0740 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0740
Description:

Target: scaffold0740; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 5731 - 5621
Alignment:
Q  3 caacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatt 100  Q
    ||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||||    
T  5731 caacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccatttttcctaagaaaaactactatt 5632  T
Q  101 tatacaaatag 111  Q
    |||||| ||||    
T  5631 tatacagatag 5621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 20041 - 20110
Alignment:
Q  40 ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactactatttatacaaa 108  Q
    |||||||||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||||||||||||    
T  20041 ttgagcgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactactatttatacaaa 20110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 118397 - 118510
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| ||  || ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||| |||||| || | ||||||||||    
T  118397 tgcaacttgtgactcgtttgtcgattccatacggacagtattgagtgtaagttttgcgtatgattgaattgtgacccgtttttcctaagaaaaactacta 118496  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  118497 tttatacaaataga 118510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 142247 - 142360
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||   |||||| || ||||||||| |||||| || | ||||||||||    
T  142247 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagttttgaatatgattgaattgtgacccgtttttcctaagaaaaactacta 142346  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  142347 tttatacaaataga 142360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 25119 - 25232
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  25119 tgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttcta 25218  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  25219 tttatacaaataga 25232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28617 - 28730
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  28617 tgcaacttgttactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttcta 28716  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  28717 tttatacaaataga 28730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 390183 - 390070
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| |||||| ||| |||| ||| ||||| |||||||||  ||||||| || ||||||||| ||||| ||| | ||||||| ||    
T  390183 tgcaacttgtgactcgtttgtctcttccatacggacagtattgagtgtaagttttgagtatgattgaattgtgacccgtttttcctaagaaaaactaata 390084  T
Q  99 tttatacaaataga 112  Q
    |||||| |||||||    
T  390083 tttatagaaataga 390070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 115376 - 115489
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||| |||||| |||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||| |||    
T  115376 tgcaactggtgacttgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttcta 115475  T
Q  99 tttatacaaataga 112  Q
    ||||||||||||||    
T  115476 tttatacaaataga 115489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 129928 - 130040
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttctagggaaaactactat 99  Q
    ||||||| |||||| |||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || |||||||  ||||| ||| | |||||| ||||    
T  129928 tgcaactggtgacttgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgactgtttttcctaagaaaaacttctat 130027  T
Q  100 ttatacaaataga 112  Q
    |||||||||||||    
T  130028 ttatacaaataga 130040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 1250 - 1362
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| || || |||||||||| ||||||| || ||||||||  |||||| || | ||||||||||    
T  1250 tgcaacttgtgactcgtttgtcgcttccatacggacagtatttagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactacta 1349  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  1350 tttatacaaatag 1362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 7678 - 7790
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| || || |||||||||| ||||||| || ||||||||  |||||| || | ||||||||||    
T  7678 tgcaacttgtgactcgtttgtcgcttccatacggacagtatttagtgtaagtttttagtatgattgaattgtgacctgtttttcctaagaaaaactacta 7777  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  7778 tttatacaaatag 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 5810 - 5922
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccctttttt-ctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| |   || || |||||||||| ||||||| || ||||||||||||||| ||| | ||||||||||    
T  5810 tgcaacttgtgactcgtttgtcgcttccatacggacaaaattaagtgtaagtttttagtatgattgaattgtgacccttttttcctaagaaaaactacta 5909  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  5910 tttatacaaatag 5922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17024 - 17136
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| || | | | ||||||| |||||||| ||||||| || ||||||||| ||||||||| | |||||||||     
T  17024 tgcaacttgtgactcgtttgtcgcttccatacgaacaatattgagcgcaagtttttagtatgattgaattgtgaccctttttttctaagaaaaactactc 17123  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  17124 tttatacaaatag 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 5618 - 5542
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatttata 104  Q
    |||||||||||||||| ||||||||| | |||||| || ||||||||| |||||| || | ||||||||||| ||||    
T  5618 atgcggatagtttgagtgtaagttttctatatgattgaattgtgacccgtttttcatatgaaaaactactatctata 5542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 32177 - 32065
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||| |||||||||| || ||| ||| |||| | | ||||| |||||||||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  32177 tgcaacttttgactcgtttgtcgcttccatacggacaatattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 32078  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  32077 tttatacaaatag 32065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 41436 - 41324
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| |||||||  | ||||||||  |||||| || | ||||||||||    
T  41436 tgcaacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattaaattgtgacctgtttttcctaagaaaaactacta 41337  T
Q  99 tttatacaaatag 111  Q
    |||||||||||||    
T  41336 tttatacaaatag 41324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 2533 - 2422
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttct-agggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||||| | | |||||| |||    
T  2533 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagggtaagtttttggtatgattgaattgtgacccgtttttcttaagaaaaacttcta 2434  T
Q  99 tttatacaaata 110  Q
    ||||||||||||    
T  2433 tttatacaaata 2422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 18532 - 18642
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactattt 101  Q
    |||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | |||||| ||||||    
T  18532 aacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctattt 18631  T
Q  102 atacaaataga 112  Q
     ||||||||||    
T  18632 ctacaaataga 18642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 28063 - 28173
Alignment:
Q  4 aacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactactattt 101  Q
    |||||||||||||||| || ||| ||| |||| ||| ||||| |||||||||| ||||||| || ||||||||| ||||| ||| | |||||| ||||||    
T  28063 aacttgtgactcgtttgtcgcttccatacggacagtattgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacttctattt 28162  T
Q  102 atacaaataga 112  Q
     ||||||||||    
T  28163 ctacaaataga 28173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 4617 - 4505
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| | || ||| ||||| ||||| |||| ||||||| || |||||||| |||||| ||| | ||||||||||    
T  4617 tgcaacttgtgactcgtttgtcgcttccatactgacagtattgagtgtaagattttagtatgattgaattgtgacctctttttcctaagaaaaactacta 4518  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  4517 tttatacagatag 4505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15353 - 15465
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||||| |||||||| || ||| ||| |||| ||| |||||||||||||||| ||||||| || |||||||| |||| || ||   ||||||||||    
T  15353 tgcaacttgtaactcgtttgtcgcttccatacggacagtattgagcgtaagtttttagtatgattgaattgtgaccattttatcataaaaaaaactacta 15452  T
Q  99 tttatacaaatag 111  Q
    |||||||| ||||    
T  15453 tttatacagatag 15465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43149 - 43256
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactacta 98  Q
    |||||||| |||||||||| || ||| ||| |||| ||| ||||| |||||| ||| ||||||| || ||||||||| |||||| || | ||||||||||    
T  43149 tgcaacttatgactcgtttgtcgcttccatacggacagtattgagtgtaagtgtttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 43248  T
Q  99 tttataca 106  Q
    ||||||||    
T  43249 tttataca 43256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1496 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1496
Description:

Target: scaffold1496; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 105
Target Start/End: Complemental strand, 1473 - 1396
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatttatac 105  Q
    |||| ||||||||||| |||||||||  ||||||| || ||||||||| |||||| || | |||||||||||||||||    
T  1473 atgcagatagtttgagtgtaagttttccgtatgattgaattgtgacccgtttttcttatgaaaaactactatttatac 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 451
Target Start/End: Original strand, 1415 - 1452
Alignment:
Q  414 gtcgtcaccaccatcgtcgtcgaccttcacatgatgtc 451  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1415 gtcgtcaccaccattgtcgtcgaccttcacatgatgtc 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 25811 - 25888
Alignment:
Q  29 atgcggatagtttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatttatac 105  Q
    ||||||||| ||| || ||||||||| |||||||| || ||||||||| |||||| || | |||||||||||||||||    
T  25811 atgcggataatttaagtgtaagttttctgtatgattgaattgtgacccgtttttcctatgaaaaactactatttatac 25888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 105
Target Start/End: Original strand, 683 - 759
Alignment:
Q  30 tgcggatagtttgagcgtaagttttttgtatgatagatttgtgacc-cttttttctagggaaaactactatttatac 105  Q
    ||||||||||||||| |||||||||||||||||  || ||||||||  ||||  ||| | |||||||||||||||||    
T  683 tgcggatagtttgagtgtaagttttttgtatgactgaattgtgacctgttttccctatgaaaaactactatttatac 759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 63875 - 63772
Alignment:
Q  1 tgcaacttgtgactcgtttctctctttcatgcggatagt-ttgagcgtaagttttttgtatgatagatttgtgaccc-ttttttctagggaaaactacta 98  Q
    ||||||||||||||||||| || ||| ||| |||| ||| || || |||| ||||| ||||||| || ||||||||| ||||| ||| | ||||||||||    
T  63875 tgcaacttgtgactcgtttgtcgcttccatacggacagtattaagtgtaaatttttagtatgattgaattgtgacccgtttttcctaagaaaaactacta 63776  T
Q  99 ttta 102  Q
    ||||    
T  63775 ttta 63772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 112
Target Start/End: Original strand, 26847 - 26920
Alignment:
Q  40 ttgagcgtaagttttttgtatgatagatttgtgacccttttttc-tagggaaaactactatttatacaaataga 112  Q
    ||||| |||||||||| ||||||| || ||||||||| |||||| || | |||||  |||||||||||||||||    
T  26847 ttgagtgtaagtttttagtatgattgaattgtgacccgtttttcctaagaaaaacccctatttatacaaataga 26920  T

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