View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11040_high_30 (Length: 296)
Name: NF11040_high_30
Description: NF11040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11040_high_30 |
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Alignment Details
Target: chr4 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 11 - 278
Target Start/End: Original strand, 44576588 - 44576855
Alignment:
| Q |
11 |
gaagaagaaaatgaaaataaagagttagatataaaataatttcttaaattaccagaagtgatgcaatacaaccatataggagggtccggaacctgccaag |
110 |
Q |
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| T |
44576588 |
gaagaagaaaatgaaaataaagagttagatataaaataatttcttaaattaccagaagtgatgcaatacaaccatataggagggtccggaacctcccaag |
44576687 |
T |
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| Q |
111 |
ataagtatcagaaatgaaagcaccaaataatgatgcaatgtttgacgatccattccaaatttgcaccacattaaccacaaatatcccactcatgttgtaa |
210 |
Q |
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| T |
44576688 |
ataagtatcagaaatgaaagcaccaactaatgatgcaatgtttgacgatccattccaaatttgcaccacattaaccacaaatatcccactcatgttgtaa |
44576787 |
T |
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| Q |
211 |
tttgtcagaagatacactgttagatttgatatcaaactcatcgatgccaatttctcaaatgactcatt |
278 |
Q |
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| T |
44576788 |
tttgtcagaagatacactgttagatttgatatcaaactcatcgatgccaatttctcaaatgactcatt |
44576855 |
T |
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