View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11040_high_46 (Length: 207)
Name: NF11040_high_46
Description: NF11040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11040_high_46 |
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Alignment Details
Target: chr2 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 41150297 - 41150113
Alignment:
| Q |
18 |
taagagtgttgtgttatctagagaaataaaaatatgtaccttgaattggtgatgacgtgggaaatcaaaggactggggaatgaagcagagtccataggca |
117 |
Q |
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| T |
41150297 |
taagagtgttgtgttatctagagaaataaaaatatgtaccttgaattggtgatgacgtgggaaatcaaaggaccggggaatgaagcagagtccataggca |
41150198 |
T |
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| Q |
118 |
gtgatatcaaattttctattcttagaaaattgaaggaaaga------atgtactcaaaaattgtgttcttaattatttcatctcac |
197 |
Q |
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| T |
41150197 |
gtgatatcaaa-tttctattcttagaaaattgaaggaaagaaaaagtatgtactcaaaaattgtgttcttaattatttcatgtcac |
41150113 |
T |
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