View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11043_low_23 (Length: 218)

Name: NF11043_low_23
Description: NF11043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11043_low_23
NF11043_low_23
[»] chr7 (27 HSPs)
chr7 (18-208)||(18512544-18512734)
chr7 (18-64)||(2541111-2541157)
chr7 (18-60)||(46354195-46354237)
chr7 (18-62)||(6736889-6736933)
chr7 (18-62)||(7644955-7644999)
chr7 (18-62)||(10693163-10693207)
chr7 (18-62)||(11617680-11617724)
chr7 (18-62)||(19426981-19427025)
chr7 (18-62)||(21172099-21172143)
chr7 (18-62)||(27629633-27629677)
chr7 (18-62)||(31591199-31591243)
chr7 (18-62)||(32233226-32233270)
chr7 (18-62)||(33872001-33872045)
chr7 (18-62)||(42391190-42391234)
chr7 (19-62)||(7193084-7193127)
chr7 (18-60)||(7879639-7879681)
chr7 (18-60)||(42805525-42805567)
chr7 (18-60)||(47716460-47716502)
chr7 (17-62)||(11741794-11741839)
chr7 (17-62)||(47077944-47077989)
chr7 (18-62)||(48735212-48735257)
chr7 (22-62)||(12473303-12473343)
chr7 (18-62)||(29907418-29907462)
chr7 (18-62)||(32758260-32758304)
chr7 (18-62)||(35203438-35203482)
chr7 (18-62)||(42495927-42495971)
chr7 (18-62)||(43557471-43557515)
[»] chr5 (14 HSPs)
chr5 (18-62)||(42924926-42924970)
chr5 (18-60)||(23974781-23974823)
chr5 (17-62)||(35710312-35710357)
chr5 (18-62)||(32703423-32703467)
chr5 (18-62)||(37024646-37024690)
chr5 (18-60)||(41014320-41014362)
chr5 (18-62)||(1565430-1565474)
chr5 (18-62)||(1850639-1850683)
chr5 (18-62)||(8170074-8170118)
chr5 (33-61)||(9794466-9794494)
chr5 (18-62)||(22025542-22025586)
chr5 (18-62)||(28516526-28516570)
chr5 (18-62)||(38879580-38879624)
chr5 (18-62)||(43334201-43334245)
[»] chr4 (26 HSPs)
chr4 (18-62)||(19027847-19027891)
chr4 (17-62)||(41018884-41018929)
chr4 (18-62)||(9832403-9832447)
chr4 (18-62)||(25463121-25463165)
chr4 (17-62)||(5306754-5306799)
chr4 (18-62)||(11054238-11054282)
chr4 (18-62)||(20224983-20225027)
chr4 (18-62)||(37494850-37494894)
chr4 (18-62)||(39077886-39077930)
chr4 (18-62)||(42164240-42164284)
chr4 (18-62)||(48598915-48598959)
chr4 (18-60)||(5648260-5648302)
chr4 (18-60)||(16408695-16408737)
chr4 (18-60)||(40915830-40915872)
chr4 (20-62)||(43035247-43035289)
chr4 (21-62)||(487230-487271)
chr4 (17-62)||(17043485-17043530)
chr4 (18-62)||(6430717-6430761)
chr4 (18-62)||(17315390-17315434)
chr4 (18-62)||(30690275-30690319)
chr4 (18-62)||(41549381-41549425)
chr4 (18-62)||(44363224-44363268)
chr4 (18-62)||(47443956-47444000)
chr4 (18-62)||(47528620-47528664)
chr4 (18-62)||(49938682-49938726)
chr4 (18-62)||(54640431-54640475)
[»] chr2 (21 HSPs)
chr2 (121-177)||(14516960-14517015)
chr2 (18-62)||(5450284-5450328)
chr2 (18-62)||(12024010-12024054)
chr2 (18-62)||(29419981-29420025)
chr2 (18-60)||(8455408-8455450)
chr2 (18-60)||(14444730-14444772)
chr2 (18-60)||(17623565-17623607)
chr2 (18-60)||(17668003-17668045)
chr2 (18-60)||(44604855-44604897)
chr2 (21-62)||(17380331-17380372)
chr2 (17-62)||(23397765-23397810)
chr2 (18-62)||(10543697-10543741)
chr2 (18-62)||(10546161-10546205)
chr2 (18-62)||(14530317-14530361)
chr2 (18-62)||(17896258-17896302)
chr2 (18-62)||(21779351-21779395)
chr2 (18-62)||(23145790-23145834)
chr2 (18-62)||(23557580-23557624)
chr2 (18-62)||(24200717-24200761)
chr2 (22-62)||(25641501-25641541)
chr2 (18-62)||(33795284-33795328)
[»] scaffold0254 (1 HSPs)
scaffold0254 (17-62)||(4156-4201)
[»] chr6 (11 HSPs)
chr6 (17-62)||(2166503-2166548)
chr6 (17-62)||(2178136-2178181)
chr6 (17-57)||(4136608-4136648)
chr6 (18-62)||(17432339-17432383)
chr6 (18-62)||(13905071-13905115)
chr6 (18-62)||(17448323-17448367)
chr6 (20-62)||(29355951-29355993)
chr6 (18-62)||(1346963-1347007)
chr6 (18-62)||(1354847-1354891)
chr6 (18-62)||(9161122-9161166)
chr6 (18-62)||(12222009-12222053)
[»] scaffold1176 (1 HSPs)
scaffold1176 (18-62)||(1677-1721)
[»] chr8 (23 HSPs)
chr8 (18-62)||(31457172-31457216)
chr8 (18-62)||(35105922-35105966)
chr8 (18-62)||(2626518-2626562)
chr8 (18-62)||(12670340-12670384)
chr8 (18-62)||(17823575-17823619)
chr8 (18-62)||(18164851-18164895)
chr8 (18-62)||(20869588-20869632)
chr8 (18-62)||(22598156-22598200)
chr8 (18-62)||(30454187-30454231)
chr8 (18-62)||(39461088-39461132)
chr8 (18-62)||(44781598-44781642)
chr8 (18-60)||(6760823-6760865)
chr8 (18-60)||(7136621-7136663)
chr8 (18-60)||(26954133-26954175)
chr8 (18-60)||(28407417-28407459)
chr8 (18-60)||(28817718-28817760)
chr8 (18-60)||(36720797-36720839)
chr8 (18-60)||(44530150-44530192)
chr8 (18-59)||(12625891-12625932)
chr8 (22-62)||(389642-389682)
chr8 (18-62)||(20284165-20284209)
chr8 (18-62)||(21070794-21070838)
chr8 (18-62)||(42083791-42083835)
[»] chr3 (18 HSPs)
chr3 (18-62)||(5173812-5173856)
chr3 (18-60)||(54032651-54032693)
chr3 (18-62)||(516430-516474)
chr3 (18-62)||(1217111-1217155)
chr3 (18-62)||(8247781-8247825)
chr3 (18-62)||(10870043-10870087)
chr3 (18-62)||(30928239-30928283)
chr3 (18-62)||(34420736-34420780)
chr3 (18-61)||(46421129-46421172)
chr3 (20-62)||(13628886-13628928)
chr3 (18-60)||(13730696-13730738)
chr3 (18-60)||(40272904-40272946)
chr3 (18-60)||(45948930-45948972)
chr3 (18-62)||(26573148-26573192)
chr3 (18-62)||(45139570-45139614)
chr3 (18-62)||(45620921-45620965)
chr3 (18-62)||(53996658-53996702)
chr3 (18-62)||(54374438-54374482)
[»] chr1 (17 HSPs)
chr1 (18-60)||(46991828-46991870)
chr1 (18-62)||(2435985-2436029)
chr1 (18-62)||(10668247-10668291)
chr1 (18-62)||(18724637-18724681)
chr1 (18-62)||(22327121-22327165)
chr1 (18-62)||(25468355-25468399)
chr1 (18-62)||(31272466-31272510)
chr1 (18-62)||(32632648-32632692)
chr1 (18-62)||(34725188-34725232)
chr1 (18-62)||(35005145-35005189)
chr1 (19-62)||(20036242-20036285)
chr1 (18-60)||(30395820-30395862)
chr1 (21-59)||(50760321-50760359)
chr1 (17-62)||(35117859-35117904)
chr1 (18-62)||(11596535-11596579)
chr1 (18-62)||(38478372-38478416)
chr1 (18-62)||(45812627-45812671)
[»] scaffold0223 (1 HSPs)
scaffold0223 (18-62)||(11130-11174)
[»] scaffold0187 (2 HSPs)
scaffold0187 (18-62)||(10140-10184)
scaffold0187 (18-62)||(20468-20512)
[»] scaffold0311 (1 HSPs)
scaffold0311 (18-60)||(10811-10853)
[»] scaffold0258 (1 HSPs)
scaffold0258 (18-56)||(16733-16771)
[»] scaffold0057 (1 HSPs)
scaffold0057 (18-60)||(46832-46874)
[»] scaffold0168 (1 HSPs)
scaffold0168 (18-62)||(30578-30622)
[»] scaffold0049 (1 HSPs)
scaffold0049 (18-62)||(58976-59020)


Alignment Details
Target: chr7 (Bit Score: 154; Significance: 7e-82; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 154; E-Value: 7e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 18512544 - 18512734
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttccaactatcatcgcaatctataatcatgaaatgattcagcagtctttctcnnnnnn 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||          
T  18512544 ttttacacaagatgttgtttccaggacttgaacccgtgacctttccaactatcatcgcaatctataatcacgaaatgattcagcagtctttctctttttt 18512643  T
Q  118 ncgacaggttgcatcctttgcaaactaggttggttttgccttttcatttggcaatgactacacttcttaaatcatactattctgtgctgct 208  Q
     ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18512644 tcgacaggttgcatcctttgcaaactaggttggtgttgccttttcatttggcaatgactacacttcttaaatcatactattctgagctgct 18512734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 2541111 - 2541157
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttcca 64  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||||    
T  2541111 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcca 2541157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 46354237 - 46354195
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  46354237 ttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6736933 - 6736889
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||    
T  6736933 ttttatacaagaggttgttttgaggacttgaacccgtgacctttc 6736889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 7644999 - 7644955
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  7644999 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 7644955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10693163 - 10693207
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  10693163 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 11617680 - 11617724
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  11617680 ttttacacaagaggttgtttccaggacttgaacctgtgacctttc 11617724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 19426981 - 19427025
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  19426981 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21172099 - 21172143
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  21172099 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 21172143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 27629677 - 27629633
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  27629677 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 31591199 - 31591243
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  31591199 ttttacacaagaggttgtttccaggacttgaactcgtgacctttc 31591243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 32233226 - 32233270
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||    
T  32233226 ttttacacaagaggttgtttccaggacttgaacccatgacctttc 32233270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 33872001 - 33872045
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||    
T  33872001 ttttacacaagaggttgtttccaggacttgaacccgcgacctttc 33872045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42391190 - 42391234
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  42391190 ttttacacaagaagctgtttccaggacttgaacccgtgacctttc 42391234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 7193127 - 7193084
Alignment:
Q  19 tttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||| |||||||  |||||||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttc 7193084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 7879681 - 7879639
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    ||||||||||||  |||||| ||||||||||||||||||||||    
T  7879681 ttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 42805567 - 42805525
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  42805567 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 47716502 - 47716460
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  47716502 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 11741839 - 11741794
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| ||| | |||||||||||||||||||| |||||||||    
T  11741839 attttacactagaagctgttttcaggacttgaacccatgacctttc 11741794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 47077944 - 47077989
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||||   ||||| ||||||||||||||||||||||||    
T  47077944 attttacacaagagactgtttccaggacttgaacccgtgacctttc 47077989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 48735212 - 48735257
Alignment:
Q  18 ttttacacaagatgttgttttca-ggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| || ||||||||||||||||||||||    
T  48735212 ttttacacaagaggttgtttccaaggacttgaacccgtgacctttc 48735257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 12473343 - 12473303
Alignment:
Q  22 acacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||| ||||||| |||||||||||||| |||||||||    
T  12473343 acacaagaggttgtttgcaggacttgaacccatgacctttc 12473303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 29907462 - 29907418
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | |||||  |||||||||||||||||||||||    
T  29907462 ttttacacaagaggctgtttctaggacttgaacccgtgacctttc 29907418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32758304 - 32758260
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||    
T  32758304 ttttacacaagaggctgtttccaggacttgaacctgtgacctttc 32758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35203482 - 35203438
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||   ||||| ||||||||||||||||||||||||    
T  35203482 ttttacacaagagaatgtttccaggacttgaacccgtgacctttc 35203438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42495927 - 42495971
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  42495927 ttttatacaagaggctgtttccaggacttgaacccgtgacctttc 42495971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 43557515 - 43557471
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| |||||||||||||| |||||||||    
T  43557515 ttttacacaagaggctgtttccaggacttgaacccatgacctttc 43557471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42924926 - 42924970
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  42924926 ttttacacaagatgttgttttcaggacttgaactcgtgacctttc 42924970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 23974823 - 23974781
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  23974823 ttttacacaagaggttgtttccaggacttgaacccgtgacctt 23974781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 35710357 - 35710312
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||    
T  35710357 attttacacaagaggctgtttccaggacttgaacccgtgacctttc 35710312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 32703467 - 32703423
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  32703467 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 32703423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 37024646 - 37024690
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 37024690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 41014362 - 41014320
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  41014362 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1565474 - 1565430
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||| ||||| ||||||| ||||||||||||||| ||||||||    
T  1565474 ttttactcaagaggttgtttccaggacttgaacccgcgacctttc 1565430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1850683 - 1850639
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||| ||| | ||||||||||||||||||||||    
T  1850683 ttttacacaagaggttatttccgggacttgaacccgtgacctttc 1850639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8170074 - 8170118
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||| | | ||||| ||||||||||||||||||||||||    
T  8170074 ttttacacaaaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 9794466 - 9794494
Alignment:
Q  33 tgttttcaggacttgaacccgtgaccttt 61  Q
    |||||||||||||||||||||||||||||    
T  9794466 tgttttcaggacttgaacccgtgaccttt 9794494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 22025586 - 22025542
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| |||||||||||||| |||||||||    
T  22025586 ttttacacaagaggctgtttccaggacttgaacccatgacctttc 22025542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28516526 - 28516570
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| || |||||||||||||||||||||    
T  28516526 ttttacacaagaggatgtttccaagacttgaacccgtgacctttc 28516570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 38879624 - 38879580
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  38879624 ttttatacaagaggctgtttccaggacttgaacccgtgacctttc 38879580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 43334245 - 43334201
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| || | ||||| ||||||||||||||||||||||||    
T  43334245 ttttacacaggaggctgtttccaggacttgaacccgtgacctttc 43334201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 19027891 - 19027847
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  19027891 ttttacacaagatgttgtttccaggacttgaacccgtgacctttc 19027847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 41018884 - 41018929
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  41018884 attttacacaagaggttgtttccaggacttgaacccgtgacctttc 41018929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 9832403 - 9832447
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||||||||||||||||||||||||||||    
T  9832403 ttttacacaagaggctgttttcaggacttgaacccgtgacctttc 9832447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25463165 - 25463121
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  25463165 ttttacacaagaggttgtttccaggacttgaacccgtgacctttc 25463121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 5306754 - 5306799
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||    
T  5306754 attttacacaagaggctgtttccaggacttgaacccgtgacctttc 5306799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 11054238 - 11054282
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||   ||||||||||||||||||||||||||||||    
T  11054238 ttttacacaagagactgttttcaggacttgaacccgtgacctttc 11054282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 20225027 - 20224983
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||    
T  20225027 ttttacacaagaggttgtttccaggacttgaacccatgacctttc 20224983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 37494894 - 37494850
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  37494894 ttttacacaagaggttgtttccaggacttgaacctgtgacctttc 37494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 39077886 - 39077930
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  39077886 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 39077930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42164240 - 42164284
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| || |||||||||||||||||||||    
T  42164240 ttttacacaagaggttgtttccaagacttgaacccgtgacctttc 42164284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 48598915 - 48598959
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  48598915 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 48598959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 5648302 - 5648260
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  5648302 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 16408695 - 16408737
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  16408695 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 40915872 - 40915830
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  40915872 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 43035289 - 43035247
Alignment:
Q  20 ttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||| ||||||| | ||||||||||||||||||||||    
T  43035289 ttacacaagaggttgtttcctggacttgaacccgtgacctttc 43035247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 487230 - 487271
Alignment:
Q  21 tacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  487230 tacacaagaggttgtttccaagacttgaacccgtgacctttc 487271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 17043485 - 17043530
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| | ||||| ||||||||||||| ||||||||||    
T  17043485 attttacacaagaggctgtttccaggacttgaacctgtgacctttc 17043530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 6430717 - 6430761
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| || |||||||||||||||||||||    
T  6430717 ttttacacaagaggctgtttccatgacttgaacccgtgacctttc 6430761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17315390 - 17315434
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| |||||||  |||| ||||||||||||||||||    
T  17315390 ttttacacaagaggttgtttcgaggaattgaacccgtgacctttc 17315434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30690275 - 30690319
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | | ||| ||||||||||||||||||||||||    
T  30690275 ttttacacaagaggctttttccaggacttgaacccgtgacctttc 30690319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 41549425 - 41549381
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||| ||||||||||||||| ||||    
T  41549425 ttttacacaagaggttgtttccagaacttgaacccgtgacatttc 41549381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44363224 - 44363268
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| || | |||||||||||||||||| |||||||||||    
T  44363224 ttttacacacgaggctgttttcaggacttgaactcgtgacctttc 44363268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 47444000 - 47443956
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||| ||||| | ||||| ||||||||||||||||||||||||    
T  47444000 ttttacgcaagaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 47528620 - 47528664
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||    
T  47528620 ttttacacaagaggctgtttccaggacttgaacctgtgacctttc 47528664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 49938682 - 49938726
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||    
T  49938682 ttttacacaagaggctgtttccaggacttgaacctgtgacctttc 49938726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 54640431 - 54640475
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| || |||||||||||||||||||||    
T  54640431 ttttacacaagaggctgtttccaagacttgaacccgtgacctttc 54640475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 121 - 177
Target Start/End: Complemental strand, 14517015 - 14516960
Alignment:
Q  121 acaggttgcatcctttgcaaactaggttggttttgccttttcatttggcaatgacta 177  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||    
T  14517015 acaggttgcatcctttggaaactaggttgg-tttgccttttcattttgcaatgacta 14516960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 5450328 - 5450284
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  5450328 ttttacacaagaggttgtttccaggaattgaacccgtgacctttc 5450284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12024010 - 12024054
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  12024010 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12024054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 29419981 - 29420025
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| |||||||||||| |||||||||||    
T  29419981 ttttacacaagaggttgtttccaggacttgaactcgtgacctttc 29420025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 8455408 - 8455450
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  8455408 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 14444772 - 14444730
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  14444772 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 17623607 - 17623565
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| |||||||  |||||||||||||||||||||    
T  17623607 ttttacacaagaggttgtttcgaggacttgaacccgtgacctt 17623565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 17668045 - 17668003
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||    
T  17668045 ttttacacaagaggttctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 44604897 - 44604855
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||    
T  44604897 ttttacacaagaggttgtttccaggacttgaacctgtgacctt 44604855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 17380331 - 17380372
Alignment:
Q  21 tacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  17380331 tacacaagaggttgtttccaagacttgaacccgtgacctttc 17380372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 23397810 - 23397765
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| | ||||| |||||||||||||| |||||||||    
T  23397810 attttacacaagaggctgtttccaggacttgaacccatgacctttc 23397765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10543741 - 10543697
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| |  |||| ||||||||||||||||||||||||    
T  10543741 ttttacacaagaggccgtttccaggacttgaacccgtgacctttc 10543697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10546205 - 10546161
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  10546205 ttttatacaagaggatgtttccaggacttgaacccgtgacctttc 10546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 14530361 - 14530317
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  14530361 ttttatacaagaggctgtttccaggacttgaacccgtgacctttc 14530317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17896302 - 17896258
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| |||||||  |||||||||| ||||||||||||    
T  17896302 ttttacacaagaggttgtttctaggacttgaatccgtgacctttc 17896258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21779351 - 21779395
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||| | ||||||||||||||||||||||||    
T  21779351 ttttacacaagaggctgtctccaggacttgaacccgtgacctttc 21779395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23145790 - 23145834
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||   |||||||| |||||||||||||||||||||    
T  23145790 ttttacacaagagtctgttttcaagacttgaacccgtgacctttc 23145834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23557580 - 23557624
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||   |||||||| |||||||||||||||||||||    
T  23557580 ttttacacaagagtctgttttcaagacttgaacccgtgacctttc 23557624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 24200717 - 24200761
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||| ||||    
T  24200717 ttttacacaagaggctgtttccaggacttgaacccgtgacttttc 24200761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 25641541 - 25641501
Alignment:
Q  22 acacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||| ||| ||||| ||||||||||||||||||||||||    
T  25641541 acacaaaatgctgtttccaggacttgaacccgtgacctttc 25641501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 33795328 - 33795284
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||| ||||| ||||||| | ||||||||||||||||||||||    
T  33795328 ttttacccaagaggttgtttccgggacttgaacccgtgacctttc 33795284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 4201 - 4156
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  4201 attttacacaagaggttgtttccaggacttgaacccgtgacctttc 4156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 2166503 - 2166548
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  2166503 attttacacaagaggttgtttccaggacttgaacccgtgacctttc 2166548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 2178136 - 2178181
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  2178136 attttacacaagaggttgtttccaggacttgaacccgtgacctttc 2178181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 4136608 - 4136648
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgac 57  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  4136608 attttacacaagatgttgtttttaggacttgaacccgtgac 4136648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17432383 - 17432339
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  17432383 ttttacacaagatgttgtttccaggacttgaacctgtgacctttc 17432339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 13905071 - 13905115
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| || ||||||||||||||| |||||||||||||    
T  13905071 ttttacacaagaggtcgttttcaggacttgagcccgtgacctttc 13905115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17448367 - 17448323
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||    
T  17448367 ttttacacaaaatgttgttttcaaaacttgaacccgtgacctttc 17448323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 29355951 - 29355993
Alignment:
Q  20 ttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||| | ||||| ||||||||||||||||||||||||    
T  29355951 ttacacaagaggctgtttccaggacttgaacccgtgacctttc 29355993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1347007 - 1346963
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||  | ||||| ||||||||||||||||||||||||    
T  1347007 ttttacacaagtggctgtttccaggacttgaacccgtgacctttc 1346963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 1354847 - 1354891
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||    
T  1354847 ttttacacaagaggctgtttccaggacttgaaccagtgacctttc 1354891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 9161166 - 9161122
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||    
T  9161166 ttttacacaagaggctgtttccaggacttgaacctgtgacctttc 9161122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12222009 - 12222053
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| || |||||||||||||||||||||    
T  12222009 ttttacacaagaggctgtttccaagacttgaacccgtgacctttc 12222053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 1677 - 1721
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| |||||||||||||||||||||| |||||||||    
T  1677 ttttacacaagaggttgttttcaggacttgaacccatgacctttc 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31457216 - 31457172
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  31457216 ttttacacaagaggttgtttacaggacttgaacccgtgacctttc 31457172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35105966 - 35105922
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  35105966 ttttacacaagaggttgtttccaggacttgaacccgtgacctttc 35105922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 2626562 - 2626518
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  2626562 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 12670340 - 12670384
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  12670340 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 12670384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 17823619 - 17823575
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  17823619 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18164851 - 18164895
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  18164851 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 18164895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 20869588 - 20869632
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  20869588 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 20869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 22598200 - 22598156
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||||    
T  22598200 ttttacacaagaggttgtttccaggatttgaacccgtgacctttc 22598156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30454187 - 30454231
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  30454187 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 30454231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 39461088 - 39461132
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  39461088 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 39461132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 44781598 - 44781642
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||    
T  44781598 ttttacacaagaggttgtttccaggacttgaacccgtgaactttc 44781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 6760865 - 6760823
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  6760865 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 7136621 - 7136663
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| |||||||||||||| |||||||    
T  7136621 ttttacacaagaggttgtttccaggacttgaacccatgacctt 7136663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 26954175 - 26954133
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  26954175 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 28407459 - 28407417
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  28407459 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 28407417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 28817718 - 28817760
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  28817718 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 28817760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 36720839 - 36720797
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  36720839 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 36720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 44530192 - 44530150
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| || |||||||||||||||||||    
T  44530192 ttttacacaagaggttgtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 59
Target Start/End: Complemental strand, 12625932 - 12625891
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacct 59  Q
    |||||||||||| ||||||| |||||||||| ||||||||||    
T  12625932 ttttacacaagaggttgtttccaggacttgagcccgtgacct 12625891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 389682 - 389642
Alignment:
Q  22 acacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||| | ||||| ||||||||||||||||||||||||    
T  389682 acacaagagggtgtttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 20284165 - 20284209
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  20284165 ttttatacaagaggctgtttccaggacttgaacccgtgacctttc 20284209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 21070794 - 21070838
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  21070794 ttttatacaagaggctgtttccaggacttgaacccgtgacctttc 21070838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42083791 - 42083835
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||| | | ||||| ||||||||||||||||||||||||    
T  42083791 ttttacacaaaaggctgtttccaggacttgaacccgtgacctttc 42083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 5173812 - 5173856
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  5173812 ttttacacaagaggttgtttccaggacttgaacccgtgacctttc 5173856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 54032651 - 54032693
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  54032651 ttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 516474 - 516430
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  516474 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 516430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1217155 - 1217111
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  1217155 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 1217111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 8247781 - 8247825
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  8247781 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 8247825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10870043 - 10870087
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  10870043 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10870087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 30928239 - 30928283
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  30928239 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 30928283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34420736 - 34420780
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  34420736 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 34420780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 46421129 - 46421172
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgaccttt 61  Q
    |||||||||||| | ||||| |||||||||||||||||||||||    
T  46421129 ttttacacaagaggctgtttccaggacttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 62
Target Start/End: Original strand, 13628886 - 13628928
Alignment:
Q  20 ttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||| | ||||| ||||||||||||||||||||||||    
T  13628886 ttacacaagaggctgtttccaggacttgaacccgtgacctttc 13628928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 13730696 - 13730738
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  13730696 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 40272904 - 40272946
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| |||||||||||||| |||||||    
T  40272904 ttttacacaagaggttgtttccaggacttgaacccatgacctt 40272946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 45948930 - 45948972
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||||| ||||||||||||||||    
T  45948930 ttttacacaagaggttgtttccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 26573192 - 26573148
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| || | ||||| ||||||||||||||||||||||||    
T  26573192 ttttacacaggaggctgtttccaggacttgaacccgtgacctttc 26573148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 45139570 - 45139614
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||  ||||||||||||||||||||    
T  45139570 ttttacacaagaggttgtttccaaaacttgaacccgtgacctttc 45139614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 45620921 - 45620965
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||| ||||||||||||||||||||    
T  45620921 ttttacacaagaggctgtttccagaacttgaacccgtgacctttc 45620965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 53996658 - 53996702
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| || ||||||||| |||||||||||    
T  53996658 ttttacacaagaggttgtttccacgacttgaacacgtgacctttc 53996702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 54374438 - 54374482
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| || |||||||||| ||||||||||    
T  54374438 ttttacacaagaggttgtttccaagacttgaacctgtgacctttc 54374482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.00000000008; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 46991870 - 46991828
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  46991870 ttttacacaagaggttgtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 2435985 - 2436029
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||    
T  2435985 ttttacacaggaggttgtttccaggacttgaacccgtgacctttc 2436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 10668291 - 10668247
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  10668291 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10668247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18724637 - 18724681
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  18724637 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 18724681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 22327165 - 22327121
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||||| ||||||||    
T  22327165 ttttacacaagaggttgtttccaggacttgaacccgcgacctttc 22327121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25468355 - 25468399
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| |||||||||||||| |||||||||    
T  25468355 ttttacacaagaggttgtttccaggacttgaacccatgacctttc 25468399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 31272466 - 31272510
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  31272466 ttttacacaagaggttgtttccaggacttgaacctgtgacctttc 31272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 32632648 - 32632692
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  32632648 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 32632692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34725188 - 34725232
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  34725188 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 34725232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 35005189 - 35005145
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | |||||||| |||||||||||||||||||||    
T  35005189 ttttacacaagaggctgttttcaagacttgaacccgtgacctttc 35005145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 20036285 - 20036242
Alignment:
Q  19 tttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||  |||||| ||||||||||||||||||||||||    
T  20036285 tttacacaagagtttgtttccaggacttgaacccgtgacctttc 20036242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 30395820 - 30395862
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| | ||||| ||||||||||||||||||||||    
T  30395820 ttttacacaagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 50760321 - 50760359
Alignment:
Q  21 tacacaagatgttgttttcaggacttgaacccgtgacct 59  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  50760321 tacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 35117859 - 35117904
Alignment:
Q  17 attttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||| | | ||| ||||||||||||||||||||||||    
T  35117859 attttacacaagaggctatttccaggacttgaacccgtgacctttc 35117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 11596579 - 11596535
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| |||||||  |||||||||||||||||| ||||    
T  11596579 ttttacacaagaggttgtttctaggacttgaacccgtgacatttc 11596535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 38478372 - 38478416
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | |||||  |||||||||||||||||||||||    
T  38478372 ttttacacaagaggctgtttctaggacttgaacccgtgacctttc 38478416  T

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Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 45812627 - 45812671
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||||||||||   ||||||||||||||||||| ||||||||||    
T  45812627 ttttacacaagagactgttttcaggacttgaacctgtgacctttc 45812671  T

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Target: scaffold0223 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 11174 - 11130
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  11174 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 11130  T

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Target: scaffold0187 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 10140 - 10184
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  10140 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 10184  T

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Target: scaffold0187; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 20468 - 20512
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||||||||||||||    
T  20468 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 20512  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 10853 - 10811
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| |||||||||||  |||||||||||||||||    
T  10853 ttttacacaagaggttgttttcagaccttgaacccgtgacctt 10811  T

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Target: scaffold0258 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 16771 - 16733
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtga 56  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  16771 ttttacataagaagttgttttcaggacttgaacccgtga 16733  T

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Target: scaffold0057 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 46874 - 46832
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctt 60  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||    
T  46874 ttttacacaagaggttgtttccagcacttgaacccgtgacctt 46832  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30622 - 30578
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    |||||||||||| | ||||| ||||||||||||| ||||||||||    
T  30622 ttttacacaagaggctgtttccaggacttgaaccggtgacctttc 30578  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 59020 - 58976
Alignment:
Q  18 ttttacacaagatgttgttttcaggacttgaacccgtgacctttc 62  Q
    ||||| |||||| | ||||| ||||||||||||||||||||||||    
T  59020 ttttatacaagaggctgtttccaggacttgaacccgtgacctttc 58976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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