View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11045_high_13 (Length: 258)
Name: NF11045_high_13
Description: NF11045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11045_high_13 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 3697685 - 3697942
Alignment:
| Q |
1 |
atggttcaatcaatgaaggaggtggcaaaaacaagaagaacaagagggaagaaataaagggtattctcacatcaattctcttgcttgatgaacaagagaa |
100 |
Q |
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| T |
3697685 |
atggttcaatcaatgaaggaggtggcaaaaacaagaagaacaagaaggaagaattaaagggtattctcacatcaattctcttgcttgatgaacaagagaa |
3697784 |
T |
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| Q |
101 |
acaagagattgaagatagcaagaaagtctcagaggatgagaaattctctttagaggcaaatcataagaagaaaacaaaagccatggttgattattactcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3697785 |
acaagagattgaagatagcaagaaagtctcagaggacgagaaattctctttagaggcaaatcataagaagaaaacaaaagccatggttgattattactcc |
3697884 |
T |
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| Q |
201 |
aatcttgaagatggttatagtcaagttgaagaatcagagaaagttagaaggagaaaaa |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3697885 |
aatcttgaagatggttatagtcaagttgaagaatcagagaaagttagaaggagaaaaa |
3697942 |
T |
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