View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11045_high_6 (Length: 380)

Name: NF11045_high_6
Description: NF11045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11045_high_6
NF11045_high_6
[»] chr6 (41 HSPs)
chr6 (1-366)||(26314632-26314997)
chr6 (4-53)||(7265594-7265643)
chr6 (4-53)||(7996379-7996428)
chr6 (4-53)||(8022373-8022422)
chr6 (4-53)||(9025495-9025544)
chr6 (5-52)||(13364707-13364754)
chr6 (3-53)||(11784216-11784266)
chr6 (1-51)||(13360370-13360420)
chr6 (16-53)||(7569181-7569218)
chr6 (4-53)||(9195755-9195804)
chr6 (4-53)||(9617443-9617492)
chr6 (4-53)||(9629392-9629441)
chr6 (4-53)||(19040361-19040410)
chr6 (4-53)||(21924936-21924985)
chr6 (5-53)||(7086804-7086852)
chr6 (5-53)||(9658888-9658936)
chr6 (15-82)||(677818-677884)
chr6 (15-53)||(1532249-1532287)
chr6 (11-53)||(5462695-5462737)
chr6 (4-50)||(7377991-7378037)
chr6 (3-53)||(19044473-19044523)
chr6 (7-53)||(25038075-25038121)
chr6 (4-50)||(26562701-26562747)
chr6 (3-53)||(34895034-34895084)
chr6 (4-53)||(5732511-5732560)
chr6 (4-53)||(7723251-7723300)
chr6 (4-53)||(7938125-7938174)
chr6 (4-53)||(7977831-7977880)
chr6 (16-53)||(8389485-8389522)
chr6 (4-53)||(9027187-9027236)
chr6 (9-50)||(11591876-11591917)
chr6 (4-53)||(13851745-13851794)
chr6 (20-53)||(19602198-19602231)
chr6 (8-53)||(30866149-30866194)
chr6 (4-53)||(34073348-34073397)
chr6 (5-53)||(15443704-15443752)
chr6 (9-53)||(21142127-21142171)
chr6 (9-53)||(24832597-24832641)
chr6 (17-53)||(31579239-31579275)
chr6 (1-53)||(33419182-33419234)
chr6 (13-53)||(33817958-33817998)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-82)||(90824-90904)
[»] chr3 (24 HSPs)
chr3 (4-53)||(8039836-8039885)
chr3 (4-53)||(8383266-8383315)
chr3 (1-53)||(20691328-20691380)
chr3 (4-70)||(7614416-7614481)
chr3 (3-49)||(29112280-29112326)
chr3 (4-53)||(7928459-7928508)
chr3 (4-53)||(21419456-21419505)
chr3 (4-53)||(40150572-40150621)
chr3 (4-52)||(8789551-8789599)
chr3 (5-53)||(17005621-17005669)
chr3 (9-53)||(29508453-29508497)
chr3 (7-53)||(10690266-10690312)
chr3 (15-53)||(16192762-16192800)
chr3 (4-82)||(25093483-25093560)
chr3 (9-51)||(27097065-27097107)
chr3 (3-52)||(27764716-27764766)
chr3 (4-53)||(4201405-4201454)
chr3 (4-53)||(9800049-9800098)
chr3 (1-53)||(11251987-11252037)
chr3 (4-53)||(15796295-15796344)
chr3 (4-53)||(18426958-18427007)
chr3 (16-53)||(25652044-25652081)
chr3 (4-53)||(49505155-49505204)
chr3 (17-53)||(21211297-21211333)
[»] chr8 (23 HSPs)
chr8 (3-53)||(14134708-14134758)
chr8 (5-53)||(7658472-7658520)
chr8 (1-53)||(12606827-12606879)
chr8 (9-53)||(13203650-13203694)
chr8 (4-50)||(14634142-14634188)
chr8 (4-53)||(4786339-4786388)
chr8 (4-53)||(11927087-11927136)
chr8 (4-53)||(12985401-12985450)
chr8 (4-53)||(13844597-13844646)
chr8 (4-53)||(34897094-34897143)
chr8 (5-53)||(4122251-4122299)
chr8 (1-53)||(20679393-20679445)
chr8 (6-53)||(4611543-4611590)
chr8 (5-76)||(11803246-11803316)
chr8 (6-53)||(31236580-31236627)
chr8 (15-53)||(12559118-12559156)
chr8 (4-82)||(24669414-24669491)
chr8 (3-53)||(33382019-33382069)
chr8 (16-53)||(3025560-3025597)
chr8 (4-53)||(11944674-11944723)
chr8 (4-53)||(33405385-33405434)
chr8 (5-54)||(40332199-40332248)
chr8 (4-44)||(26902176-26902216)
[»] chr4 (27 HSPs)
chr4 (12-53)||(37698721-37698762)
chr4 (4-53)||(8423719-8423768)
chr4 (3-53)||(5775358-5775408)
chr4 (15-88)||(903897-903969)
chr4 (16-53)||(24343516-24343553)
chr4 (1-53)||(9996849-9996901)
chr4 (1-53)||(21539865-21539917)
chr4 (17-53)||(56257942-56257978)
chr4 (1-48)||(8402740-8402787)
chr4 (15-53)||(22440612-22440650)
chr4 (15-53)||(36635333-36635371)
chr4 (9-42)||(1213227-1213260)
chr4 (4-53)||(4672086-4672135)
chr4 (16-53)||(6273953-6273990)
chr4 (1-77)||(15835636-15835712)
chr4 (3-52)||(18576037-18576086)
chr4 (4-53)||(21720508-21720557)
chr4 (16-53)||(30838219-30838256)
chr4 (8-53)||(40613459-40613504)
chr4 (4-53)||(40742600-40742649)
chr4 (4-53)||(54580024-54580073)
chr4 (9-53)||(999354-999398)
chr4 (6-50)||(16189721-16189765)
chr4 (17-53)||(32910560-32910596)
chr4 (1-53)||(33950145-33950197)
chr4 (5-53)||(43299973-43300021)
chr4 (9-53)||(43300625-43300669)
[»] chr5 (32 HSPs)
chr5 (1-53)||(12927663-12927715)
chr5 (4-53)||(32630736-32630785)
chr5 (4-53)||(36838552-36838601)
chr5 (4-53)||(3966512-3966561)
chr5 (4-53)||(6035492-6035540)
chr5 (4-53)||(6471890-6471939)
chr5 (4-53)||(22423813-22423862)
chr5 (16-53)||(25863213-25863250)
chr5 (4-53)||(28588675-28588724)
chr5 (4-53)||(30502389-30502438)
chr5 (4-53)||(30542732-30542781)
chr5 (5-53)||(23012410-23012458)
chr5 (13-52)||(10022642-10022681)
chr5 (6-53)||(17593725-17593772)
chr5 (18-53)||(27932244-27932279)
chr5 (15-90)||(33035813-33035887)
chr5 (4-54)||(26312777-26312827)
chr5 (7-53)||(30098335-30098381)
chr5 (4-50)||(34879362-34879408)
chr5 (4-53)||(2548396-2548445)
chr5 (18-51)||(6326312-6326345)
chr5 (16-53)||(7997179-7997216)
chr5 (3-52)||(14873527-14873576)
chr5 (4-53)||(16203796-16203845)
chr5 (4-53)||(39205889-39205938)
chr5 (4-49)||(41091258-41091303)
chr5 (4-53)||(41633744-41633793)
chr5 (5-53)||(15410450-15410498)
chr5 (8-52)||(18421846-18421890)
chr5 (5-53)||(19737484-19737532)
chr5 (15-51)||(24273042-24273078)
chr5 (15-51)||(24389136-24389172)
[»] chr1 (44 HSPs)
chr1 (1-53)||(16927183-16927235)
chr1 (1-53)||(28674809-28674861)
chr1 (18-88)||(37055871-37055940)
chr1 (1-50)||(23636047-23636096)
chr1 (4-53)||(38503329-38503378)
chr1 (4-53)||(39130768-39130817)
chr1 (5-53)||(1864882-1864930)
chr1 (1-53)||(2896119-2896171)
chr1 (4-52)||(44482240-44482288)
chr1 (1-88)||(5898264-5898350)
chr1 (4-42)||(48148038-48148076)
chr1 (4-82)||(52903230-52903307)
chr1 (4-53)||(7918212-7918261)
chr1 (5-42)||(24462678-24462715)
chr1 (4-53)||(36878470-36878519)
chr1 (4-53)||(40181880-40181929)
chr1 (4-52)||(25361896-25361944)
chr1 (9-49)||(49872850-49872890)
chr1 (4-51)||(7353494-7353541)
chr1 (3-82)||(27471566-27471644)
chr1 (4-47)||(34371728-34371771)
chr1 (4-82)||(6612172-6612249)
chr1 (4-53)||(1486710-1486759)
chr1 (4-53)||(6427359-6427408)
chr1 (16-53)||(8010300-8010337)
chr1 (4-53)||(9629901-9629950)
chr1 (4-53)||(9709829-9709878)
chr1 (4-53)||(9828053-9828102)
chr1 (4-53)||(14332643-14332692)
chr1 (5-82)||(17754292-17754368)
chr1 (15-52)||(19324572-19324609)
chr1 (4-53)||(20157351-20157400)
chr1 (15-52)||(25098567-25098604)
chr1 (16-53)||(34298445-34298482)
chr1 (4-53)||(34712384-34712433)
chr1 (4-53)||(41017405-41017454)
chr1 (4-53)||(41877471-41877520)
chr1 (5-53)||(10233262-10233310)
chr1 (5-53)||(10572591-10572639)
chr1 (1-53)||(18190106-18190158)
chr1 (5-53)||(22907341-22907389)
chr1 (4-44)||(30749858-30749898)
chr1 (4-44)||(30771309-30771349)
chr1 (1-53)||(40258931-40258983)
[»] chr2 (32 HSPs)
chr2 (7-82)||(30527599-30527673)
chr2 (4-53)||(34691806-34691855)
chr2 (4-53)||(34714218-34714267)
chr2 (11-53)||(22084840-22084882)
chr2 (6-88)||(23718001-23718082)
chr2 (6-88)||(24105673-24105754)
chr2 (4-53)||(5367201-5367250)
chr2 (16-53)||(23921262-23921299)
chr2 (4-53)||(42832277-42832326)
chr2 (4-53)||(44860329-44860378)
chr2 (5-53)||(2415326-2415374)
chr2 (15-79)||(15909644-15909707)
chr2 (1-53)||(18276530-18276582)
chr2 (5-53)||(39279684-39279732)
chr2 (1-53)||(40361752-40361804)
chr2 (4-47)||(35056883-35056926)
chr2 (15-53)||(21616771-21616809)
chr2 (3-49)||(38355887-38355933)
chr2 (12-50)||(41942117-41942155)
chr2 (4-53)||(12668424-12668473)
chr2 (4-49)||(13273019-13273064)
chr2 (4-53)||(18889592-18889641)
chr2 (17-82)||(21782832-21782896)
chr2 (4-53)||(24975326-24975375)
chr2 (20-53)||(25544490-25544523)
chr2 (4-53)||(31026704-31026753)
chr2 (16-53)||(31456654-31456691)
chr2 (4-53)||(37411245-37411294)
chr2 (9-53)||(12940941-12940985)
chr2 (1-53)||(18841011-18841063)
chr2 (4-44)||(20242728-20242768)
chr2 (5-53)||(44605141-44605189)
[»] chr7 (38 HSPs)
chr7 (4-53)||(5235995-5236044)
chr7 (1-53)||(5835256-5835308)
chr7 (4-55)||(22602711-22602762)
chr7 (5-79)||(5233613-5233686)
chr7 (4-82)||(20549772-20549849)
chr7 (7-53)||(27732243-27732289)
chr7 (4-53)||(7328692-7328741)
chr7 (4-53)||(7758331-7758380)
chr7 (4-53)||(21880161-21880210)
chr7 (1-82)||(22484006-22484086)
chr7 (4-53)||(27945050-27945099)
chr7 (4-52)||(5548686-5548734)
chr7 (4-52)||(9482944-9482992)
chr7 (5-53)||(23128663-23128711)
chr7 (4-44)||(39138462-39138502)
chr7 (6-49)||(3520345-3520388)
chr7 (4-51)||(17307904-17307951)
chr7 (18-53)||(30813821-30813856)
chr7 (1-34)||(640141-640174)
chr7 (4-53)||(3721102-3721151)
chr7 (4-53)||(4909160-4909209)
chr7 (9-42)||(10478729-10478762)
chr7 (4-53)||(16341505-16341554)
chr7 (4-53)||(18013075-18013124)
chr7 (4-53)||(19206059-19206108)
chr7 (4-53)||(19992010-19992059)
chr7 (16-53)||(25239716-25239753)
chr7 (4-53)||(26022550-26022599)
chr7 (4-53)||(28155579-28155628)
chr7 (4-53)||(32308129-32308178)
chr7 (17-53)||(2424623-2424659)
chr7 (4-52)||(3554507-3554555)
chr7 (9-53)||(8239056-8239100)
chr7 (17-53)||(11890933-11890969)
chr7 (9-53)||(12278844-12278888)
chr7 (5-53)||(15902831-15902879)
chr7 (5-53)||(17851440-17851488)
chr7 (17-53)||(29787383-29787419)
[»] scaffold0020 (1 HSPs)
scaffold0020 (4-82)||(135313-135390)
[»] scaffold0011 (1 HSPs)
scaffold0011 (3-53)||(240021-240071)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-53)||(9748-9797)
[»] scaffold0049 (2 HSPs)
scaffold0049 (1-53)||(63782-63834)
scaffold0049 (20-52)||(56932-56964)
[»] scaffold0039 (1 HSPs)
scaffold0039 (3-51)||(84973-85021)
[»] scaffold0123 (1 HSPs)
scaffold0123 (7-50)||(44529-44572)
[»] scaffold0044 (1 HSPs)
scaffold0044 (6-53)||(53189-53236)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-53)||(92816-92851)
[»] scaffold1528 (1 HSPs)
scaffold1528 (5-82)||(1016-1092)
[»] scaffold0376 (1 HSPs)
scaffold0376 (4-53)||(6321-6370)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-53)||(70287-70336)
[»] scaffold0027 (1 HSPs)
scaffold0027 (4-53)||(46691-46740)


Alignment Details
Target: chr6 (Bit Score: 314; Significance: 1e-177; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 1 - 366
Target Start/End: Original strand, 26314632 - 26314997
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtcaggtagccgtat 100  Q
    |||||| |||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||| ||||||| || |||| | || ||||||    
T  26314632 tctgaccccgacatatataattacattgaattatatgattttttcaaattatttagcagtatcggtgtctcactgtctgtattgtgtctgatatccgtat 26314731  T
Q  101 tcatgtttgataggtcacggatcaacaccatgtatgatcatatttaaaccccatgtatttgtcgaattgtgctaaactaattaaagagtactaaattgaa 200  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26314732 tcatgtttcataggtcacggatcaacaccatgtatgatcatatttaaaccccatgtatttgtcgaattgtgctaaaccaattaaagagtactaaattgaa 26314831  T
Q  201 tgcaggtattctaaaatggaacatataatactttaccctgaaaactgtccttttctatttttatagtaaacatttgtcctatggttttggaccacaaaac 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26314832 tgcaggtattctaaaatggaacatataatactttaccctgaaaactgtccttttctatttttatagtaaacatttgtcctatggttttggaccacaaaac 26314931  T
Q  301 agtaacagaaacaggaataggaagaagaaaccaaaagtgaacagtttcgcttttgtctgctttctg 366  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26314932 agtaacagaaacaggaataggaagaagaaaccaaaagtgaacagtttcgcttttgtctgctttctg 26314997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7265594 - 7265643
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  7265594 gacaccgacacatataattacactgaattatgtgattttctcaaattatt 7265643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7996379 - 7996428
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  7996379 gacaccgacgcatataattacactgaattatatgattttctcaaattatt 7996428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 8022422 - 8022373
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  8022422 gacaccgacgcatataattacactgaattatatgattttctcaaattatt 8022373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9025495 - 9025544
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  9025495 gacaccgacacatataattacactgaattatgtgattttctcaaattatt 9025544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 13364707 - 13364754
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    ||||||||| |||| ||||||||||||||||| |||||||||||||||    
T  13364707 acaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 11784216 - 11784266
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||||||||||| | || | ||||||||||||||||    
T  11784216 tgacaccgacatatataattacactgattcatgtgattttctcaaattatt 11784266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13360370 - 13360420
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaatta 51  Q
    ||||||||||| | |||||||||||||||||||| | ||||||||||||||    
T  13360370 tctgacaccgaaacatataattacactgaattatgtgattttctcaaatta 13360420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 7569181 - 7569218
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7569181 tataattacactgaattatgtaattttctcaaattatt 7569218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9195755 - 9195804
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| |||||| | ||||||||||||||||    
T  9195755 gacaccgacacatataattacactaaattatgtcattttctcaaattatt 9195804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9617492 - 9617443
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  9617492 gacaccgacacatataattacattgaattatgtgattttctcaaattatt 9617443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9629441 - 9629392
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  9629441 gacaccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19040410 - 19040361
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| |||||||||||||||||||| | ||||||||||||||||    
T  19040410 gacacagacacatataattacactgaattatgtgattttctcaaattatt 19040361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 21924936 - 21924985
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | || |||||||||||||    
T  21924936 gacaccgacacatataattacactgaattatttgatattctcaaattatt 21924985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 7086852 - 7086804
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||||||||||||| |||||| | ||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattatt 7086804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 9658936 - 9658888
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||||||||||||||||||| | ||||||| ||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattatt 9658888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 677884 - 677818
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||||| ||||||  ||||||| |||||||||||||| |||||||| |||| || |||||||||||||    
T  677884 atataaatacactatattatatgattttctcaaatta-ttaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 1532287 - 1532249
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  1532287 atataattacactgaattatgtaattttatcaaattatt 1532249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 5462737 - 5462695
Alignment:
Q  11 acatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||| |||||||| | ||||||||||||||||    
T  5462737 acatatataattacaatgaattatgtgattttctcaaattatt 5462695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 7378037 - 7377991
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaatt 50  Q
    |||||||||| ||||||||||| |||||||| | |||||||||||||    
T  7378037 gacaccgacacatataattacattgaattatgtgattttctcaaatt 7377991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 19044523 - 19044473
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| ||||||| |||||||||||| | || |||||||||||||    
T  19044523 tgacaccgacacatataataacactgaattatgtgatattctcaaattatt 19044473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 25038075 - 25038121
Alignment:
Q  7 accgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| | |||||||||| |||||| ||||||||||||||||||    
T  25038075 accgacatttgtaattacactaaattatgtaattttctcaaattatt 25038121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 26562747 - 26562701
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaatt 50  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||||    
T  26562747 gacatcgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 34895034 - 34895084
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||||  ||| ||||||||||||| ||||||||||||||||||||    
T  34895034 tgacactgacacctatgattacactgaattgtataattttctcaaattatt 34895084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 5732511 - 5732560
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| || ||| | ||||||||||||||||    
T  5732511 gacaccgacacatataattacactaaaatatgtgattttctcaaattatt 5732560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7723251 - 7723300
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| | |||||||||  ||||||||||| ||||||||||||||||    
T  7723251 gacaccgatacatataattatgctgaattatatgattttctcaaattatt 7723300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 7938174 - 7938125
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  |||||||||||| |||||||| ||||| ||||||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattatt 7938125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7977831 - 7977880
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  | ||||||||||||||||| ||||||| ||||||||||    
T  7977831 gacaccgacacttgtaattacactgaattatgtaattttttcaaattatt 7977880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 8389485 - 8389522
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  8389485 tataattacactgaattatatgattttcttaaattatt 8389522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9027236 - 9027187
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||| ||||||| | ||| ||||||||||||    
T  9027236 gacaccgacacatataattacacggaattatgtgattatctcaaattatt 9027187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaatt 50  Q
    ||||| |||||||||||||||||||| | |||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 13851794 - 13851745
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| ||||| |||||||||||||||||||  | ||||||||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattatt 13851745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 19602198 - 19602231
Alignment:
Q  20 attacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||| ||||||||||||||||    
T  19602198 attacactgaattatatcattttctcaaattatt 19602231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 30866149 - 30866194
Alignment:
Q  8 ccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||||||||||| |||||||| | ||||||||||||||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattatt 30866194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34073348 - 34073397
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||  ||||||||||||||||||||   ||||||||||||||||    
T  34073348 gacaccgacccatataattacactgaattatgagattttctcaaattatt 34073397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 15443752 - 15443704
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| ||||||||||||| | |||||||| | ||||||||||||||||    
T  15443752 acaccaacatatataattatattgaattatgttattttctcaaattatt 15443704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 21142171 - 21142127
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||||| || |||||||||||| ||||||||||||||||    
T  21142171 cgacacatataactagactgaattatatgattttctcaaattatt 21142127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 24832641 - 24832597
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| ||||||||||||| |||||||  ||||||||||||||||    
T  24832641 cgacacatataattacactaaattataagattttctcaaattatt 24832597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 31579239 - 31579275
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||| | ||||||||||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatt 31579275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33419234 - 33419182
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||| ||||||||||| |||||||||| | ||| ||||||||||    
T  33419234 tctgacaccaacacatataattacattgaattatatcaatttttcaaattatt 33419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 33817998 - 33817958
Alignment:
Q  13 atatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||||||  ||||||||| |||||||    
T  33817998 atatataattacactgaattatgaaattttctccaattatt 33817958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 90904 - 90824
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||  || | ||||| |||||||||||||    
T  90904 tctgacatcgacatatataattacactgaattatatgattttctcaaatta-ttaatggtgttggtgtgtcagtgtctgtgt 90824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 8039836 - 8039885
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8039836 gacaccgacacatataattacactgaattatataattttctcaaattatt 8039885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 8383315 - 8383266
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  8383315 gacaccgacacttataattacactgaattatatgattttctcaaattatt 8383266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20691380 - 20691328
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| |||| ||||||||||||||| | ||||||||||||||||    
T  20691380 tctgacaccgacacatatgattacactgaattatgtcattttctcaaattatt 20691328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 7614416 - 7614481
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtct 70  Q
    |||||||||||||||||||| |||||||||| | ||||||| |||||| ||||| || |||||||||    
T  7614416 gacaccgacatatataattatactgaattatgtgattttcttaaatta-ttaactgtgtcggtgtct 7614481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 29112280 - 29112326
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaat 49  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||||    
T  29112280 tgacgccgtcatatataattacactgaattatatgattttctcaaat 29112326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 7928508 - 7928459
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | ||||| ||||||||||    
T  7928508 gacaccgacacatataattacactgaattatgtgattttttcaaattatt 7928459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 21419456 - 21419505
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||||||||||||||| |||||||||| ||||||| ||||||||    
T  21419456 gacaccaacatatataattacattgaattatattattttcttaaattatt 21419505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 40150572 - 40150621
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||| |||||| |||||||||| ||||||||||||||||    
T  40150572 gacaccgacacatatgattacattgaattatatcattttctcaaattatt 40150621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 8789551 - 8789599
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||||    
T  8789551 gacaccgacacatataattacacggaattatgtgattttctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 17005621 - 17005669
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||  ||||||||||||||||||||| ||||| ||||||||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattatt 17005669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 29508497 - 29508453
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||||||||||||||||||||| ||||| ||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattatt 29508453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 10690266 - 10690312
Alignment:
Q  7 accgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||| |||||||||||||||||||| | ||||||||| ||||||    
T  10690266 accgacaaatataattacactgaattatgtgattttctcagattatt 10690312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 16192762 - 16192800
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  16192762 atataattacactgaattatgttattttctcaaattatt 16192800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 25093560 - 25093483
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||||||||| |||||||||||||||||| | | |||||||||||| | |||||||| |||| || | |||||| ||||    
T  25093560 gacaccgacacatataattacactgaattgtgtgattttctcaaatca-ttaacagtgtcggcgtgttagtgtcagtgt 25093483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 27097065 - 27097107
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaatta 51  Q
    ||||||||||||||| | |||||||| ||||||||||||||||    
T  27097065 cgacatatataattaaattgaattatgtaattttctcaaatta 27097107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 27764766 - 27764716
Alignment:
Q  3 tgacaccgacatatataa-ttacactgaattatataattttctcaaattat 52  Q
    ||||||||||  |||||| ||||| ||||||||||||||||||||||||||    
T  27764766 tgacaccgacccatataaattacattgaattatataattttctcaaattat 27764716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4201454 - 4201405
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||||||||||||||||| |||||| | ||||| ||||||||||    
T  4201454 gacaccaacatatataattacacttaattatgtgattttttcaaattatt 4201405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9800098 - 9800049
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  || |||||||| ||||||| ||||||||||||||||||    
T  9800098 gacaccgacacttacaattacacggaattatgtaattttctcaaattatt 9800049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11252037 - 11251987
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| |||  ||||||||||||||| | ||||||||||||||||    
T  11252037 tctgacaccgacacata--attacactgaattatgtgattttctcaaattatt 11251987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 15796295 - 15796344
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  | ||||||||||||||||||| ||||| ||||||||||    
T  15796295 gacaccgacaattgtaattacactgaattatatgattttttcaaattatt 15796344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 18427007 - 18426958
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||||||| ||||||| | ||||| | ||||||||    
T  18427007 gacaccgacatatataattacaccgaattatgtgattttttgaaattatt 18426958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 25652044 - 25652081
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  25652044 tataactacactgaattatatcattttctcaaattatt 25652081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 49505155 - 49505204
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| ||||||||||||| |||||| | ||||||||||||||||    
T  49505155 gacactgacacatataattacactaaattatgtgattttctcaaattatt 49505204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 21211333 - 21211297
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  21211333 ataattacactgaactatgtaattttctcaaattatt 21211297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 14134758 - 14134708
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  14134758 tgacaccgacatatataattacactgaattatgtgattttctcaaattatt 14134708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 7658520 - 7658472
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattatt 7658472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12606827 - 12606879
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  12606827 tctgacaccgacacatataattacattgaattatatgattttctcaaattatt 12606879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 13203694 - 13203650
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||    
T  13203694 cgacgtatataattacactgaattatgtaattttctcaaattatt 13203650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 14634142 - 14634188
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaatt 50  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||    
T  14634142 gacaccaacaaatataattacactgaattatataattttcttaaatt 14634188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 4786339 - 4786388
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | ||||||| ||||||||    
T  4786339 gacaccgacacatataattacactgaattatgtgattttcttaaattatt 4786388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 11927087 - 11927136
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | ||||| ||||||||||    
T  11927087 gacaccgacacatataattacactgaattatgtgattttatcaaattatt 11927136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 12985450 - 12985401
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||| |||||| |||||||| | ||||||||||||||||    
T  12985450 gacaccgacatatatgattacattgaattatgtgattttctcaaattatt 12985401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 13844597 - 13844646
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| |||||| | ||||||||||||||||    
T  13844597 gacaccgacacatataattacactcaattatgtgattttctcaaattatt 13844646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 34897143 - 34897094
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| ||||| |||||||||||||||||||| | ||||||||||||||||    
T  34897143 gacatcgacacatataattacactgaattatgtgattttctcaaattatt 34897094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 4122251 - 4122299
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||||||||||| |||||||||||||||| || |||||||    
T  4122251 acaccgacacatataattacaatgaattatataattttatctaattatt 4122299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 20679393 - 20679445
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||  ||||||||||||||| ||| | ||||||||||||||||    
T  20679393 tctgacaccgacacttataattacactgaactatgtgattttctcaaattatt 20679445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 4611590 - 4611543
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| | |||||||||||||||||||| | ||||||||||||||||    
T  4611590 caccgagacatataattacactgaattatgttattttctcaaattatt 4611543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 11803316 - 11803246
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgt 76  Q
    ||||| ||| |||||||||||||||||||| | ||||||| |||||| |||||||| || |||| |||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaatta-ttaacagtgtcagtgtatcagtgt 11803246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 31236580 - 31236627
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| ||||||||||| |||||||| | ||||||||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattatt 31236627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 12559118 - 12559156
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatt 53  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  12559118 atatgattacactgaattatatcattttctcaaattatt 12559156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 24669491 - 24669414
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    ||||||||||  | ||||||||||||||||| |||||| ||||||||| ||||| || || | || |||||||||||||    
T  24669491 gacaccgacacttgtaattacactgaattatgtaatttcctcaaatta-ttaacggtgtcagcgtgtcagtgtctgtgt 24669414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 33382019 - 33382069
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| |||||||||| ||||||||| | ||||||| ||||||||    
T  33382019 tgacaccgacacatataattactctgaattatgtcattttcttaaattatt 33382069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 3025597 - 3025560
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  3025597 tataattacactgaattatgtgattttctcaaattatt 3025560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 11944723 - 11944674
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||||| |||| | ||||| ||||||||||    
T  11944723 gacaccgacacatataattacactgagttatgtgattttatcaaattatt 11944674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 33405385 - 33405434
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| |||||| |  |||||||||||||||    
T  33405385 gacaccgacacatataattacactaaattatgtgtttttctcaaattatt 33405434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40332248 - 40332199
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattattt 54  Q
    |||||||||  | ||||||||||||||||| | |||||||||||||||||    
T  40332248 acaccgacacttgtaattacactgaattatgtgattttctcaaattattt 40332199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 26902176 - 26902216
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttct 44  Q
    |||||||||| |||||||||||||||||||| | |||||||    
T  26902176 gacaccgacacatataattacactgaattatgtgattttct 26902216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 37698762 - 37698721
Alignment:
Q  12 catatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37698762 catatataattacactgaattatataattttctcaaattatt 37698721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 8423719 - 8423768
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  8423719 gacaccgacatttataattacactgaattatgtgattttctcaaattatt 8423768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 5775358 - 5775408
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| ||||||||||||| |||||| | ||||||||||||||||    
T  5775358 tgacaccgacacatataattacacttaattatgtgattttctcaaattatt 5775408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 903969 - 903897
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtc 88  Q
    |||||||||||||||||||| | |||||||||||||| ||||| ||  |||||| |||||||| || |||||||    
T  903969 atataattacactgaattatgtgattttctcaaatta-ttaacggtgccggtgtgtcagtgtccgttttatgtc 903897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 24343553 - 24343516
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24343553 tataattacactgaattatgtaattttctcaaattatt 24343516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9996901 - 9996849
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| | ||||||||| |||||||||| | ||||||||||||||||    
T  9996901 tctgacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 21539865 - 21539917
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| || ||||||||||||||| |||||||| ||||||| ||||||||    
T  21539865 tctgacacggatatatataattacactaaattatatgattttcttaaattatt 21539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 56257978 - 56257942
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| ||||||||||||||||    
T  56257978 ataattacactgaattatatgattttctcaaattatt 56257942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 8402740 - 8402787
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaa 48  Q
    |||||||| || | |||||||||||||||||||||| |||||||||||    
T  8402740 tctgacactgagacatataattacactgaattatatgattttctcaaa 8402787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Original strand, 22440612 - 22440650
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  22440612 atataattacactgaattatgtgattttctcaaattatt 22440650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 36635371 - 36635333
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  36635371 atataattacactgaattatgtgattttctcaaattatt 36635333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 1213227 - 1213260
Alignment:
Q  9 cgacatatataattacactgaattatataatttt 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  1213227 cgacacatataattacactgaattatataatttt 1213260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 4672086 - 4672135
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||  ||||||||||||| |||||||| |||||||||    
T  4672086 gacaccgacacatatagctacactgaattatgtaattttcccaaattatt 4672135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 6273990 - 6273953
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  6273990 tataattacactaaattatatcattttctcaaattatt 6273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 15835636 - 15835712
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataa-ttttctcaaattatttaacagtatcggtgtctcagtgtc 77  Q
    ||||||||| ||| |||| ||||||| ||||||||||| |||| |||||||| |||||||| ||||||| || |||||    
T  15835636 tctgacaccaacacatatgattacacggaattatataatttttttcaaatta-ttaacagtgtcggtgtgtctgtgtc 15835712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 18576037 - 18576086
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    ||||||| ||| |||||||||||| ||||||| | |||||||||||||||    
T  18576037 tgacaccaacacatataattacaccgaattatgtgattttctcaaattat 18576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 21720508 - 21720557
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||| ||||| | |||||||| ||||| ||||||||||    
T  21720508 gacaccgacatatatagttacattaaattatatgattttatcaaattatt 21720557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 30838256 - 30838219
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  30838256 tataattacactaaattatataattttatcaaattatt 30838219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 40613504 - 40613459
Alignment:
Q  8 ccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| |||||||||||||||||||| | ||||||||||| ||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatatt 40613459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 40742649 - 40742600
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| ||||| |||||||||||||  ||||||| ||||||||||||||||    
T  40742649 gacatcgacacatataattacactagattatatgattttctcaaattatt 40742600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 54580024 - 54580073
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaattatt 54580073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 999354 - 999398
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| ||||||||||||| |||||||| |||| |||||||||||    
T  999354 cgacacatataattacactaaattatatgatttactcaaattatt 999398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 16189765 - 16189721
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaatt 50  Q
    |||||||| | |||||||||||||||||| | |||||||||||||    
T  16189765 caccgacacacataattacactgaattatgtgattttctcaaatt 16189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 32910596 - 32910560
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||| | ||||||||||||||||    
T  32910596 ataattacactgaattatgtcattttctcaaattatt 32910560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33950197 - 33950145
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| |||| |||||| | |||||| | ||||||||||||||||    
T  33950197 tctgacaccgacacatatgattacattaaattatgtgattttctcaaattatt 33950145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 43299973 - 43300021
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| || |||| |||||| |||||||| ||||||||||||||||||    
T  43299973 acaccggcagatatgattacattgaattatgtaattttctcaaattatt 43300021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 43300669 - 43300625
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| |||||| |||||||| ||||||||||||||||||    
T  43300669 cgacaaatatgattacattgaattatgtaattttctcaaattatt 43300625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12927715 - 12927663
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  12927715 tctgacactgacatatataattacactaaattatatgattttctcaaattatt 12927663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 32630736 - 32630785
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| ||||||||||| |||||||||||||||||||||||||||    
T  32630736 gacactgacacatataattacattgaattatataattttctcaaattatt 32630785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 36838601 - 36838552
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  36838601 gacaccgacacatataattacactaaattatgtaattttctcaaattatt 36838552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 3966561 - 3966512
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||| | | ||||||||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattatt 3966512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6035540 - 6035492
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  6035540 gacaccgacaaatataattacactgaattatatta-tttctcaaattatt 6035492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 6471890 - 6471939
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||| |||||||||||||||||||| | ||||||||||||||||    
T  6471890 gacacccacacatataattacactgaattatgtgattttctcaaattatt 6471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 22423813 - 22423862
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| | |||||||| | ||||||||||||||||    
T  22423813 gacaccgacatatataattatattgaattatgtgattttctcaaattatt 22423862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 25863250 - 25863213
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25863250 tataattacactgaattatatcattttctcaaattatt 25863213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 28588675 - 28588724
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  28588675 gacaccgacacctataattacactgaattatgtgattttctcaaattatt 28588724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30502389 - 30502438
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||  | ||||||||||||||||    
T  30502389 gacaccgacacatataattacactgaattaagtgattttctcaaattatt 30502438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30542732 - 30542781
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||  | ||||||||||||||||    
T  30542732 gacaccgacacatataattacactgaattaagtgattttctcaaattatt 30542781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23012410 - 23012458
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||||||||||| | |||||||| ||||||||||||||||    
T  23012410 acaccgacacatataattacattaaattatatgattttctcaaattatt 23012458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 13 - 52
Target Start/End: Complemental strand, 10022681 - 10022642
Alignment:
Q  13 atatataattacactgaattatataattttctcaaattat 52  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  10022681 atatataattacactgaattatatgattttatcaaattat 10022642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 17593725 - 17593772
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| |||||||||||||||||||||||  | ||||||||||||||||    
T  17593725 caccaacatatataattacactgaattacgtgattttctcaaattatt 17593772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 27932279 - 27932244
Alignment:
Q  18 taattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27932279 taattacactgaattatgtaattttctcaaattatt 27932244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 90
Target Start/End: Original strand, 33035813 - 33035887
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtcag 90  Q
    |||||||||||||||||||||| ||||  |||||||| ||||  |||||||||| ||||||||  ||||| |||||    
T  33035813 atataattacactgaattatatgatttattcaaatta-ttaatggtatcggtgtatcagtgtccatgttacgtcag 33035887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 26312827 - 26312777
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattattt 54  Q
    |||||||| | |||||||||||||||||||  | |||||||||||||||||    
T  26312827 gacaccgatacatataattacactgaattaattgattttctcaaattattt 26312777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 30098381 - 30098335
Alignment:
Q  7 accgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| |||||||||| |||||||| | ||||||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattatt 30098335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 34879408 - 34879362
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaatt 50  Q
    |||| ||||| |||| ||||||||||||||||| |||||||||||||    
T  34879408 gacatcgacacatattattacactgaattatatgattttctcaaatt 34879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 2548445 - 2548396
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||| ||||||||||||||| |||||||||| |||||||    
T  2548445 gacaccgacacttatgattacactgaattatgtaattttctctaattatt 2548396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 6326312 - 6326345
Alignment:
Q  18 taattacactgaattatataattttctcaaatta 51  Q
    ||||||||||||||||| ||||||||||||||||    
T  6326312 taattacactgaattatgtaattttctcaaatta 6326345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 7997179 - 7997216
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  7997179 tataattacactgtattatatcattttctcaaattatt 7997216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Complemental strand, 14873576 - 14873527
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    ||||||||||| ||||||||||||| |||||| |  ||||||||||||||    
T  14873576 tgacaccgacacatataattacactaaattatgtgcttttctcaaattat 14873527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16203796 - 16203845
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| ||||||   ||||||||||||||||    
T  16203796 gacaccgacacatataattacactaaattatgagattttctcaaattatt 16203845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 39205938 - 39205889
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||| ||||||||||||  |||||||| ||||||||||||||||    
T  39205938 gacaccaacacatataattacacctaattatatgattttctcaaattatt 39205889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 41091258 - 41091303
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaat 49  Q
    |||| ||||| |||||||||||||||||||| | ||||||||||||    
T  41091258 gacatcgacacatataattacactgaattatgtgattttctcaaat 41091303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 41633793 - 41633744
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| | ||||||||||||||||| ||| ||| ||||||||||    
T  41633793 gacaccgacatttgtaattacactgaattatgtaaatttttcaaattatt 41633744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 15410450 - 15410498
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| ||| |||| |||||||||||| |||||||||||| ||||||||    
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattatt 15410498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 18421846 - 18421890
Alignment:
Q  8 ccgacatatataattacactgaattatataattttctcaaattat 52  Q
    |||||| |||||||||||||| ||||| | |||||||||||||||    
T  18421846 ccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 19737484 - 19737532
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||| ||| || |||||||| ||||||||||||||||||    
T  19737484 acaccgacacatatgattgcattgaattatgtaattttctcaaattatt 19737532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 24273042 - 24273078
Alignment:
Q  15 atataattacactgaattatataattttctcaaatta 51  Q
    |||||||||||||||||||| | ||||||||||||||    
T  24273042 atataattacactgaattatgtgattttctcaaatta 24273078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 24389172 - 24389136
Alignment:
Q  15 atataattacactgaattatataattttctcaaatta 51  Q
    |||||||||||||||||||| | ||||||||||||||    
T  24389172 atataattacactgaattatgtgattttctcaaatta 24389136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16927183 - 16927235
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||    
T  16927183 tctgacaccaacatatataattacactgaattatatgattttttcaaattatt 16927235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28674861 - 28674809
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  28674861 tctgacaccaacatatataattatactgaattatgtaattttctcaaattatt 28674809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 37055871 - 37055940
Alignment:
Q  18 taattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtc 88  Q
    |||||||||| |||||| |||||||||||||||| ||| |||||||| ||| ||||||||||||| |||||    
T  37055871 taattacactaaattatgtaattttctcaaatta-ttagcagtatcgatgtatcagtgtctgtgtcatgtc 37055940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 23636047 - 23636096
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaatt 50  Q
    ||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  23636047 tctgacaccgacacatacaattacactgaattatgtaattttctcaaatt 23636096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 38503378 - 38503329
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattatt 38503329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 39130768 - 39130817
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  39130768 gacaccgacacatataattacactaaattatataattttctaaaattatt 39130817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1864882 - 1864930
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattatt 1864930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2896119 - 2896171
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||    
T  2896119 tctgacaccgacatatatagctacactgaattatgtgattttctcaaattatt 2896171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 44482288 - 44482240
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    |||||||||| |||||||||||||||||||| | |||||||||||||||    
T  44482288 gacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 5898264 - 5898350
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtc 88  Q
    ||||||||||||  |||||||||||||||||||| | ||||| ||| |||| ||| | || |||| |||||||||||||||| |||||    
T  5898264 tctgacaccgacgcatataattacactgaattatgtgattttttcagatta-ttagcggtgtcggcgtctcagtgtctgtgtcatgtc 5898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 48148038 - 48148076
Alignment:
Q  4 gacaccgacatatataattacactgaattatataatttt 42  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  48148038 gacaccgacatatataattacactgaattatatgatttt 48148076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 52903307 - 52903230
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||||||||| |||||||||||||||||||||| ||||| | |||||| ||||| ||||||| || | |||||| ||||    
T  52903307 gacaccgacacatataattacactgaattatatgattttattaaatta-ttaacggtatcggcgtgttagtgtccgtgt 52903230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7918212 - 7918261
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| |||||||||||||||||||| | ||||||||||||||||    
T  7918212 gacactgacacatataattacactgaattatgtgattttctcaaattatt 7918261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 24462678 - 24462715
Alignment:
Q  5 acaccgacatatataattacactgaattatataatttt 42  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  24462678 acaccgacagatataattacactgaattatataatttt 24462715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 36878519 - 36878470
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattatt 36878470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 40181929 - 40181880
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| | |||||||||||||||||||| | ||||||||||||||||    
T  40181929 gacaccgatacatataattacactgaattatgtgattttctcaaattatt 40181880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 25361944 - 25361896
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    ||||| |||| |||||||||||||||||||| | |||||||||||||||    
T  25361944 gacactgacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 49872890 - 49872850
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaat 49  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  49872890 cgacacatataattacactgaattatatagttttctcaaat 49872850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 7353494 - 7353541
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaatta 51  Q
    |||||||||||||||||||||||| |||||| ||||||| || |||||    
T  7353494 gacaccgacatatataattacactaaattatgtaattttttcgaatta 7353541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 27471566 - 27471644
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    ||||||| ||| || ||||||||||||||||| |  ||||||||||||| ||| | |||||||||| ||||||| |||||    
T  27471566 tgacaccaacacatgtaattacactgaattatgtgcttttctcaaatta-ttagcggtatcggtgtgtcagtgtttgtgt 27471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 34371771 - 34371728
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaa 47  Q
    |||||||||| |||||||||||||||||||| | ||||||||||    
T  34371771 gacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 6612172 - 6612249
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    ||||||||||  | ||||||||||||||||| ||||||| |||||||| ||||| ||||||| || ||| |||| ||||    
T  6612172 gacaccgacacttgtaattacactgaattatgtaattttttcaaatta-ttaactgtatcggcgtgtcattgtccgtgt 6612249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 1486710 - 1486759
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  1486710 gacaccgacacttataattacactgaattatgtgattttttcaaattatt 1486759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6427408 - 6427359
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||| ||||||||||| |||||||| | ||||||||||||||||    
T  6427408 gacaccaacacatataattacattgaattatgtgattttctcaaattatt 6427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 8010300 - 8010337
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  8010300 tataattatactgaattatataattttttcaaattatt 8010337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9629901 - 9629950
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  |||||| |||||||||||||| ||||| ||||||||||    
T  9629901 gacaccgacacttataatcacactgaattatatgattttatcaaattatt 9629950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9709878 - 9709829
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||  ||||||| | ||||||||||||||||    
T  9709878 gacaccgacacatataattacaacgaattatgtgattttctcaaattatt 9709829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 9828102 - 9828053
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||| |||||||||||||||| | ||||| ||||||||||    
T  9828102 gacaccgacacataaaattacactgaattatgtgattttatcaaattatt 9828053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 14332643 - 14332692
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| | ||||||||||||| |||||| | ||||||||||||||||    
T  14332643 gacaccgagacatataattacactaaattatgtgattttctcaaattatt 14332692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 17754368 - 17754292
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||| |||| ||||| |||||||||||||| ||||||| |||||||| ||| | || ||||||| |||| ||||||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaatta-ttagcggtgtcggtgtgtcagcgtctgtgt 17754292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 19324609 - 19324572
Alignment:
Q  15 atataattacactgaattatataattttctcaaattat 52  Q
    |||||||||||||||||||| | |||||||||||||||    
T  19324609 atataattacactgaattatgtgattttctcaaattat 19324572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 20157351 - 20157400
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||| ||||||||||||||| | ||||||||| ||||||    
T  20157351 gacaccgacacatatgattacactgaattatgtgattttctcacattatt 20157400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 25098567 - 25098604
Alignment:
Q  15 atataattacactgaattatataattttctcaaattat 52  Q
    |||||||||||||||||||| | |||||||||||||||    
T  25098567 atataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 34298482 - 34298445
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattatt 34298445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34712384 - 34712433
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| ||||||||||||| |||||| | ||||||||||||||||    
T  34712384 gacactgacacatataattacactaaattatgttattttctcaaattatt 34712433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 41017405 - 41017454
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| ||||||||||||||| | |||||| | ||||||||||||||||    
T  41017405 gacaccaacatatataattacattaaattatgtcattttctcaaattatt 41017454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 41877471 - 41877520
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  | |||||||||| |||||| ||||||||||||||||||    
T  41877471 gacaccgacacttgtaattacactaaattatgtaattttctcaaattatt 41877520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 10233310 - 10233262
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| |||| |||||||||||||||||||| | |||||||||| |||||    
T  10233310 acacagacacatataattacactgaattatgtgattttctcaatttatt 10233262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 10572591 - 10572639
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| || ||||||||| ||||||| | ||||||||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattatt 10572639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18190106 - 18190158
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||| |||||  | ||||||||||||||||| ||||||| ||||||||||    
T  18190106 tctgacatcgacacttgtaattacactgaattatgtaattttttcaaattatt 18190158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 22907341 - 22907389
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||  |||||||| ||  |||||||||||||||||||||||||    
T  22907341 acaccgacacttataattataccaaattatataattttctcaaattatt 22907389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 30749898 - 30749858
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttct 44  Q
    |||||||||| |||||||||||||||||||| | |||||||    
T  30749898 gacaccgacacatataattacactgaattatgtgattttct 30749858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 30771349 - 30771309
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttct 44  Q
    |||||||||| |||||||||||||||||||| | |||||||    
T  30771349 gacaccgacacatataattacactgaattatgtgattttct 30771309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40258931 - 40258983
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||  | ||||||||||||||||| | ||||| ||||||||||    
T  40258931 tctgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 40258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 30527599 - 30527673
Alignment:
Q  7 accgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||| |||||||| | ||||| |||||||| ||||    
T  30527599 accgacacatataattacactaaattatatgattttctcaaatta-ttaacagtgtgggtgtgtcagtgtcagtgt 30527673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34691806 - 34691855
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  34691806 gacaccgacacatataattacactgaattatatgattttatcaaattatt 34691855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 34714218 - 34714267
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  34714218 gacaccgacacatataattacactgaattatatgattttatcaaattatt 34714267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 22084840 - 22084882
Alignment:
Q  11 acatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  22084840 acatataaaattacactgaattatatgattttctcaaattatt 22084882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 23718082 - 23718001
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtc 88  Q
    |||||||| |||||||||||||||||||| | | |||||||||||| ||| | || ||||||| |||||||| |||| |||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaatta-ttagcggtgtcggtgtgtcagtgtccgtgtcatgtc 23718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 24105754 - 24105673
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgttatgtc 88  Q
    |||||||| |||||||||||||||||||| | | |||||||||||| ||| | || ||||||| |||||||| |||| |||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaatta-ttagcggtgtcggtgtgtcagtgtccgtgtcatgtc 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 5367250 - 5367201
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||| | |||| |||||||||||    
T  5367250 gacaccgacacatataattacactgaattatgtgatttcctcaaattatt 5367201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 23921299 - 23921262
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  23921299 tataattacactgaattatgtaattttctcaaattatt 23921262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 42832277 - 42832326
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||| ||| ||||||||||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattatt 42832326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 44860378 - 44860329
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||||||||||   ||||||||||||||||    
T  44860378 gacaccgacacatataattacactgaattatgcgattttctcaaattatt 44860329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 2415374 - 2415326
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| ||| ||||| ||||||| |||||||||||||||||||||||||    
T  2415374 acaccaacacatatagttacacttaattatataattttctcaaattatt 2415326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 79
Target Start/End: Original strand, 15909644 - 15909707
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctg 79  Q
    |||||||||||||||||||| ||||||||||||| | |||| | ||||||| || ||||||||||    
T  15909644 atataattacactgaattatgtaattttctcaaaat-tttagctgtatcggcgtgtcagtgtctg 15909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18276582 - 18276530
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| | |||||||||||||||||  | ||||||||||||||||    
T  18276582 tctgacaccgacacacataattacactgaattaagtgattttctcaaattatt 18276530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 39279732 - 39279684
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||||||||||||||||||| | ||||||||| ||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattatt 39279684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40361752 - 40361804
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||| ||||||||||||| |||||| ||||||| ||||||||||    
T  40361752 tctgacaccaacagatataattacactaaattatgtaattttttcaaattatt 40361804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 35056926 - 35056883
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaa 47  Q
    |||||||||| ||||||||||||||||||||||  |||||||||    
T  35056926 gacaccgacacatataattacactgaattatatggttttctcaa 35056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 21616809 - 21616771
Alignment:
Q  15 atataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  21616809 atataattacactgaattatgtgattttctcaaattatt 21616771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 38355887 - 38355933
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaat 49  Q
    ||||||||||| ||||||| |||||||||||| | ||||||||||||    
T  38355887 tgacaccgacacatataatcacactgaattatgtgattttctcaaat 38355933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 41942155 - 41942117
Alignment:
Q  12 catatataattacactgaattatataattttctcaaatt 50  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  41942155 catatataattatactgaattatgtaattttctcaaatt 41942117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 12668424 - 12668473
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  12668424 gacaccgacacttataattacactgaattatgtcattttttcaaattatt 12668473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 13273019 - 13273064
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaat 49  Q
    ||||| ||||| |||||||| | |||||||||||||||||||||||    
T  13273019 gacactgacatttataattagattgaattatataattttctcaaat 13273064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 18889592 - 18889641
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||| ||||||||||||||| | |||||||||| |||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatt 18889641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 21782832 - 21782896
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||||||||||||||||| | |||||||||||||| ||| |||| |||| || ||||||| |||||    
T  21782832 ataattacactgaattatgtgattttctcaaatta-ttagcagtgtcggcgtgtcagtgtttgtgt 21782896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 24975326 - 24975375
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||  ||||| |||||||||||||||  ||||||||||||||||    
T  24975326 gacaccgacgcatatatttacactgaattatacgattttctcaaattatt 24975375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 25544523 - 25544490
Alignment:
Q  20 attacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||| ||||||||||||||||    
T  25544523 attacactgaattatatcattttctcaaattatt 25544490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 31026753 - 31026704
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||| |||||| |||||||| | ||||||| ||||||||    
T  31026753 gacaccgacatatatgattacattgaattatgtcattttcttaaattatt 31026704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 31456654 - 31456691
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  31456654 tataattacactgaattacataattttcttaaattatt 31456691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 37411245 - 37411294
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| ||||| ||||||| |||||||||||| | ||||||||||||||||    
T  37411245 gacatcgacacatataatcacactgaattatgtgattttctcaaattatt 37411294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 12940941 - 12940985
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||| | ||||||||||||||||||| ||||| ||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattatt 12940985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18841011 - 18841063
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||  | |||||||||| |||||| ||||||| ||||||||||    
T  18841011 tctgacaccgacacttgtaattacacttaattatgtaattttttcaaattatt 18841063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 20242728 - 20242768
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttct 44  Q
    |||||||||| |||||||||||||||||||| | |||||||    
T  20242728 gacaccgacacatataattacactgaattatgtgattttct 20242768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44605141 - 44605189
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| || |||||||| |||||||| | ||||||||||||||||    
T  44605141 acaccgacacatgtaattacattgaattatgttattttctcaaattatt 44605189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 5236044 - 5235995
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  5236044 gacaccgatatatataattacactaaattatataattttcttaaattatt 5235995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5835308 - 5835256
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||| |||||||||||||||||||| | ||||||||||| ||||    
T  5835308 tctgacaccgacacatataattacactgaattatgttattttctcaaactatt 5835256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 22602711 - 22602762
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattattta 55  Q
    |||||||||| |||||||||||||||||||| | |||||||||||| |||||    
T  22602711 gacaccgacacatataattacactgaattatgtgattttctcaaataattta 22602762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 5233686 - 5233613
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctg 79  Q
    ||||| ||| |||||||||||||  ||||| | |||||||||||||| ||||| |||||||||| ||||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaatta-ttaaccgtatcggtgtgtcagtgtctg 5233613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 20549849 - 20549772
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||||||||| |||||||||||||||||||  | |||||||||||||| ||| | || ||||||| ||||||| |||||    
T  20549849 gacaccgacacatataattacactgaattacgtgattttctcaaatta-ttagcggtgtcggtgtgtcagtgtatgtgt 20549772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 27732243 - 27732289
Alignment:
Q  7 accgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||    
T  27732243 accgacacatataattacactgaattatgtaattttcttaaattatt 27732289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 7328692 - 7328741
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||||| |||||| | ||||||||||||||||    
T  7328692 gacaccgacacatataattacactaaattatgttattttctcaaattatt 7328741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 7758380 - 7758331
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| | ||||||| |||||||||||||||||||| ||||||||    
T  7758380 gacaccgacacacataattatactgaattatataattttctaaaattatt 7758331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 21880210 - 21880161
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  | ||||||||||||||||| ||||||||||||||||||    
T  21880210 gacaccgacacttgtaattacactgaattatgtaattttctcaaattatt 21880161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 22484086 - 22484006
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||| |||||| ||| | || |||| || |||||||||||||    
T  22484086 tctgacaccgacacatataattatactgaattatgcaattttctaaaatta-ttagcggtgtcggcgtgtcagtgtctgtgt 22484006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 27945099 - 27945050
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  | ||||||||||||||||| ||||||||||||||||||    
T  27945099 gacaccgacacttgtaattacactgaattatgtaattttctcaaattatt 27945050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 5548734 - 5548686
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    ||||| |||| |||||||||||||||||||| | |||||||||||||||    
T  5548734 gacactgacacatataattacactgaattatttgattttctcaaattat 5548686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 9482992 - 9482944
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    |||||||||| |||||||||||||||||| | | |||||||||||||||    
T  9482992 gacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23128663 - 23128711
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| |||| |||||||||||||||||  |||||||||||||||    
T  23128663 acaccgacacatatgattacactgaattatatggttttctcaaattatt 23128711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 39138502 - 39138462
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttct 44  Q
    ||||||||||||||||||||||||||||||| | |||||||    
T  39138502 gacaccgacatatataattacactgaattatgtgattttct 39138462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 3520345 - 3520388
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaat 49  Q
    |||||||| ||||||||||| |||||||||| ||||||||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaat 3520388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 17307951 - 17307904
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaatta 51  Q
    |||||| ||| |||||||||||||||||||| | ||||||||||||||    
T  17307951 gacaccaacacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 30813856 - 30813821
Alignment:
Q  18 taattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30813856 taattacactgaattatgtaattttctcaaattatt 30813821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 640174 - 640141
Alignment:
Q  1 tctgacaccgacatatataattacactgaattat 34  Q
    ||||||||||||| ||||||||||||||||||||    
T  640174 tctgacaccgacacatataattacactgaattat 640141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 3721151 - 3721102
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||| ||| |||||| | ||||||||||||||||    
T  3721151 gacaccgacacatataattatactaaattatgtgattttctcaaattatt 3721102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 4909209 - 4909160
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| |||| |||||| |||||||| ||||||||||||||||||    
T  4909209 gacactgacacatatgattacaatgaattatgtaattttctcaaattatt 4909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 10478729 - 10478762
Alignment:
Q  9 cgacatatataattacactgaattatataatttt 42  Q
    ||||| ||||||||||||||||||||||||||||    
T  10478729 cgacacatataattacactgaattatataatttt 10478762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 16341554 - 16341505
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||| || ||||||||||||| |||||| | ||||||||||||||||    
T  16341554 gacaccggcacatataattacacttaattatgtgattttctcaaattatt 16341505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 18013075 - 18013124
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| |||||||||||||||||||| ||||||| | ||||||||    
T  18013075 gacactgacacatataattacactgaattatgtaatttttttaaattatt 18013124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19206108 - 19206059
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||| | |||||||| | ||||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattatt 19206059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 19992059 - 19992010
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||| ||| | ||||||||||||||||    
T  19992059 gacaccgacacttataattacactgaaatatgtgattttctcaaattatt 19992010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 25239716 - 25239753
Alignment:
Q  16 tataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  25239716 tataattacactgagttataaaattttctcaaattatt 25239753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 26022550 - 26022599
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||| ||||||||||||| |||| || |||||||||||    
T  26022550 gacaccgacacatatagttacactgaattagataacttgctcaaattatt 26022599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 28155628 - 28155579
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  | ||||||||| ||||||| ||||||||||||||||||    
T  28155628 gacaccgacacttgtaattacaccgaattatgtaattttctcaaattatt 28155579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 32308178 - 32308129
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||| ||| |||||||||||||||| | ||||||||||||||||    
T  32308178 gacactgacacatacaattacactgaattatgtgattttctcaaattatt 32308129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 2424659 - 2424623
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||| | ||||||||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattatt 2424623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 3554507 - 3554555
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattat 52  Q
    ||||||||||| |||||||||| | |||||| ||||||||| |||||||    
T  3554507 gacaccgacatctataattacattaaattatgtaattttcttaaattat 3554555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 8239056 - 8239100
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||||||||||||||||||||  ||||||| ||||||||    
T  8239056 cgacacatataattacactgaattataagattttcttaaattatt 8239100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 11890933 - 11890969
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  11890933 ataattacactgaattatatgattttttcaaattatt 11890969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 12278888 - 12278844
Alignment:
Q  9 cgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||| |||||||||||||||||||| | ||||||| ||||||||    
T  12278888 cgacacatataattacactgaattatgtcattttcttaaattatt 12278844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 15902879 - 15902831
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||| ||||||||||||| |||||| | ||||| ||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattatt 15902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 17851488 - 17851440
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||| |||| |||||||||||||||||||| | ||||||| ||||||||    
T  17851488 acacagacacatataattacactgaattatgtgattttctaaaattatt 17851440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 29787383 - 29787419
Alignment:
Q  17 ataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||||||| | ||||||||||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattatt 29787419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 135313 - 135390
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||||||||| |||||||||||| ||||||| | |||||||||||||| ||| |||| ||||||| |  ||||||||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaatta-ttagcagtgtcggtgtgttggtgtctgtgt 135390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 240021 - 240071
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| |||| |||||| |||||||||| ||||||||||||||||    
T  240021 tgacaccgacacatatgattacattgaattatattattttctcaaattatt 240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 9748 - 9797
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| |||||||||||||||||||  | ||||||||||||||||    
T  9748 gacaccgacacatataattacactgaattaagtgattttctcaaattatt 9797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 63834 - 63782
Alignment:
Q  1 tctgacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||||||  | ||||| ||||||||||| ||||||||||||||||||    
T  63834 tctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattatt 63782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 56964 - 56932
Alignment:
Q  20 attacactgaattatataattttctcaaattat 52  Q
    ||||||||||||||||| |||||||||||||||    
T  56964 attacactgaattatatcattttctcaaattat 56932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 84973 - 85021
Alignment:
Q  3 tgacaccgacatatataattacactgaattatataattttctcaaatta 51  Q
    ||||||||||||||||||||||||  |||||||| ||||||| ||||||    
T  84973 tgacaccgacatatataattacacataattatatgattttcttaaatta 85021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 44529 - 44572
Alignment:
Q  7 accgacatatataattacactgaattatataattttctcaaatt 50  Q
    ||||||| |||||||||||||||||||| | |||||||||||||    
T  44529 accgacacatataattacactgaattatgtgattttctcaaatt 44572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 53236 - 53189
Alignment:
Q  6 caccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||  ||||||||||||||||||| | ||||||||||||||||    
T  53236 caccgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 53
Target Start/End: Complemental strand, 92851 - 92816
Alignment:
Q  18 taattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||||||||| ||||||||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattatt 92816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 1092 - 1016
Alignment:
Q  5 acaccgacatatataattacactgaattatataattttctcaaattatttaacagtatcggtgtctcagtgtctgtgt 82  Q
    |||| |||| ||||| |||||||||||||| ||||||| |||||||| ||| | || ||||||| |||| ||||||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaatta-ttagcggtgtcggtgtgtcagcgtctgtgt 1016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 6370 - 6321
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    |||||||||| ||||||||||| ||||||||  |||||| ||||||||||    
T  6370 gacaccgacacatataattacattgaattatgcaattttgtcaaattatt 6321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 70336 - 70287
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||  ||||||||||||||||||| | ||||| ||||||||||    
T  70336 gacaccgacacttataattacactgaattatgttattttttcaaattatt 70287  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 46740 - 46691
Alignment:
Q  4 gacaccgacatatataattacactgaattatataattttctcaaattatt 53  Q
    ||||||||||| | ||||||||||||||||| | ||||| ||||||||||    
T  46740 gacaccgacatttgtaattacactgaattatgtgattttttcaaattatt 46691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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