View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11045_low_11 (Length: 324)
Name: NF11045_low_11
Description: NF11045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11045_low_11 |
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Alignment Details
Target: chr5 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 67 - 292
Target Start/End: Complemental strand, 1701221 - 1700996
Alignment:
| Q |
67 |
tccagtgaaaggaataaataccgaattaatggaatcttattttcaacttacaatcagaaatcaattttcccaacaaaaacggaatcaaaatctaaacaaa |
166 |
Q |
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| T |
1701221 |
tccagtgaaaggaataaataccgaattaatggaatcttattttcaacttacaatcagaaatcaattttcccaacaaaaatggaatcaaaatctaaacaaa |
1701122 |
T |
|
| Q |
167 |
gtacacaattaaaagaataattctagaaaatctatactcgaattcaccgtttggaaaaaatttcccctagaaatgaacgggatcggaatattaggaacaa |
266 |
Q |
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| T |
1701121 |
gtacacaattaaaagaataattctagaaaatctaaactcgaattcaccgtttggaaaaaatttcccctagaaatgaacgggatcggaatattaggaacaa |
1701022 |
T |
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| Q |
267 |
aagtcgcatagtgatctccgcaaatt |
292 |
Q |
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|||||||||||||||||||| ||||| |
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| T |
1701021 |
aagtcgcatagtgatctccgaaaatt |
1700996 |
T |
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