View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11045_low_17 (Length: 255)
Name: NF11045_low_17
Description: NF11045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11045_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 34842050 - 34842295
Alignment:
| Q |
1 |
cattgaagggacaatagaaaaatgctgtagaaaacctctctacctcttcagcagcaaccactctgtgttttatgcttttgtaaacatcattgcttaatgc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34842050 |
cattgaagggacaatagaaaaatgctgtagaaaacctctctacctcttcagcagcaaccactctgtgttttatgcttttgtaaacatcattgcttaatgc |
34842149 |
T |
|
| Q |
101 |
ctgcaaggacacatatattggagtaattaaagggtccatatttcgtcaacctataagacaaaaaatattgagaatatttttacttactgtagtaattaac |
200 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34842150 |
ctgcaaggacacatatattggagtaattaaaggttccatatttcgtcaacctataagacaaaaaatattgagaatatttttacttactgtagtaattaac |
34842249 |
T |
|
| Q |
201 |
taatgtcatactcctgatgattaacttttttatattatgatgtcca |
246 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34842250 |
taatgtcatactcctgatgattaacttttttatattatgatgtcca |
34842295 |
T |
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