View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11048_high_24 (Length: 268)

Name: NF11048_high_24
Description: NF11048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11048_high_24
NF11048_high_24
[»] chr8 (54 HSPs)
chr8 (48-258)||(15976648-15976868)
chr8 (48-256)||(21603723-21603941)
chr8 (46-247)||(17014866-17015077)
chr8 (53-258)||(17287786-17288001)
chr8 (46-247)||(17542124-17542335)
chr8 (48-257)||(20257189-20257408)
chr8 (48-258)||(25164577-25164797)
chr8 (48-258)||(19940404-19940624)
chr8 (48-258)||(22672095-22672315)
chr8 (70-258)||(18152638-18152836)
chr8 (48-226)||(20260483-20260671)
chr8 (48-226)||(21047113-21047301)
chr8 (48-256)||(19941537-19941755)
chr8 (160-256)||(22463084-22463180)
chr8 (107-250)||(13690113-13690262)
chr8 (107-250)||(19233959-19234108)
chr8 (53-250)||(29085505-29085721)
chr8 (109-250)||(19427505-19427652)
chr8 (183-250)||(3350178-3350245)
chr8 (183-250)||(9366957-9367024)
chr8 (183-250)||(15782254-15782321)
chr8 (183-250)||(26119573-26119640)
chr8 (183-250)||(30316268-30316335)
chr8 (183-250)||(32079239-32079306)
chr8 (183-250)||(36087185-36087252)
chr8 (183-250)||(36302189-36302256)
chr8 (183-250)||(44490377-44490444)
chr8 (53-256)||(21297246-21297459)
chr8 (186-250)||(16745667-16745731)
chr8 (53-96)||(250922-250965)
chr8 (183-250)||(251071-251138)
chr8 (53-96)||(814023-814066)
chr8 (183-250)||(814172-814239)
chr8 (53-96)||(3350351-3350394)
chr8 (53-250)||(3842052-3842259)
chr8 (53-96)||(9366808-9366851)
chr8 (53-96)||(13690286-13690329)
chr8 (53-96)||(15782427-15782470)
chr8 (53-96)||(16745515-16745558)
chr8 (53-96)||(19137794-19137837)
chr8 (183-250)||(19137943-19138010)
chr8 (53-96)||(19233892-19233935)
chr8 (53-96)||(19427436-19427479)
chr8 (53-96)||(26119424-26119467)
chr8 (53-96)||(29075254-29075297)
chr8 (183-250)||(29075403-29075470)
chr8 (53-96)||(30316441-30316484)
chr8 (53-96)||(32079412-32079455)
chr8 (53-96)||(36087036-36087079)
chr8 (53-96)||(44490228-44490271)
chr8 (53-96)||(23791755-23791798)
chr8 (53-96)||(36302040-36302083)
chr8 (186-244)||(23791898-23791956)
chr8 (186-250)||(22149148-22149212)
[»] scaffold0359 (1 HSPs)
scaffold0359 (48-258)||(7264-7484)
[»] chr3 (95 HSPs)
chr3 (48-258)||(2559507-2559727)
chr3 (48-258)||(18123279-18123499)
chr3 (48-258)||(11188308-11188528)
chr3 (48-258)||(17244813-17245033)
chr3 (48-256)||(14908303-14908518)
chr3 (52-256)||(16029327-16029541)
chr3 (79-256)||(19886712-19886897)
chr3 (170-258)||(5211122-5211210)
chr3 (172-258)||(53058347-53058433)
chr3 (104-250)||(14078951-14079103)
chr3 (53-250)||(9382172-9382388)
chr3 (114-250)||(11207603-11207745)
chr3 (53-253)||(17016297-17016507)
chr3 (53-250)||(9983396-9983612)
chr3 (48-103)||(5211048-5211103)
chr3 (183-250)||(6183474-6183541)
chr3 (183-250)||(10628456-10628523)
chr3 (183-250)||(13374176-13374243)
chr3 (183-250)||(13384770-13384837)
chr3 (183-250)||(16397528-16397595)
chr3 (107-250)||(11273893-11274042)
chr3 (107-250)||(12239126-12239275)
chr3 (53-250)||(12288488-12288704)
chr3 (120-250)||(28315746-28315882)
chr3 (120-250)||(38203845-38203981)
chr3 (183-250)||(4752981-4753048)
chr3 (183-250)||(5538529-5538596)
chr3 (183-250)||(5581141-5581208)
chr3 (183-250)||(5867204-5867271)
chr3 (183-250)||(6491854-6491921)
chr3 (183-250)||(7796129-7796196)
chr3 (114-250)||(8997459-8997601)
chr3 (183-250)||(14474883-14474950)
chr3 (183-250)||(16392556-16392623)
chr3 (183-250)||(19787684-19787751)
chr3 (183-250)||(23766556-23766623)
chr3 (183-250)||(24385026-24385093)
chr3 (183-250)||(24669132-24669199)
chr3 (183-250)||(29462726-29462793)
chr3 (53-250)||(29935071-29935278)
chr3 (53-250)||(29984225-29984432)
chr3 (183-250)||(39381346-39381413)
chr3 (183-250)||(41692911-41692978)
chr3 (120-250)||(8783856-8783992)
chr3 (196-253)||(12754290-12754347)
chr3 (186-250)||(1785585-1785649)
chr3 (186-250)||(4432425-4432489)
chr3 (186-250)||(14312920-14312984)
chr3 (183-250)||(505678-505745)
chr3 (53-96)||(505851-505894)
chr3 (53-96)||(4432273-4432316)
chr3 (53-96)||(4752832-4752875)
chr3 (53-96)||(5519381-5519424)
chr3 (183-250)||(5519530-5519597)
chr3 (53-96)||(5538702-5538745)
chr3 (53-96)||(5581314-5581357)
chr3 (53-96)||(5867377-5867420)
chr3 (53-96)||(6183647-6183690)
chr3 (53-96)||(8783776-8783819)
chr3 (53-96)||(10628629-10628672)
chr3 (53-96)||(11274066-11274109)
chr3 (53-96)||(13130783-13130826)
chr3 (183-250)||(13130932-13130999)
chr3 (114-250)||(13263181-13263323)
chr3 (53-96)||(13374349-13374392)
chr3 (53-96)||(13384943-13384986)
chr3 (53-96)||(14474734-14474777)
chr3 (198-253)||(15847571-15847626)
chr3 (185-256)||(16306630-16306701)
chr3 (53-96)||(16392729-16392772)
chr3 (53-96)||(16397701-16397744)
chr3 (53-96)||(19787535-19787578)
chr3 (183-250)||(20674705-20674772)
chr3 (53-96)||(20674878-20674921)
chr3 (53-96)||(24385199-24385242)
chr3 (53-96)||(24668983-24669026)
chr3 (53-96)||(37875574-37875617)
chr3 (53-96)||(37884092-37884135)
chr3 (53-96)||(38203765-38203808)
chr3 (53-96)||(39381197-39381240)
chr3 (53-96)||(41692762-41692805)
chr3 (184-250)||(37875724-37875790)
chr3 (184-250)||(37884242-37884308)
chr3 (53-96)||(7796302-7796345)
chr3 (53-96)||(8997632-8997675)
chr3 (53-96)||(11207776-11207819)
chr3 (53-96)||(12239299-12239342)
chr3 (53-96)||(13263354-13263397)
chr3 (53-96)||(23766407-23766450)
chr3 (53-96)||(28315919-28315962)
chr3 (186-250)||(1062800-1062864)
chr3 (53-96)||(6492027-6492070)
chr3 (53-96)||(14313093-14313136)
chr3 (53-96)||(15847431-15847474)
chr3 (186-244)||(15652623-15652681)
[»] chr4 (55 HSPs)
chr4 (49-258)||(14905904-14906123)
chr4 (48-258)||(16852220-16852440)
chr4 (48-258)||(17245882-17246102)
chr4 (62-255)||(10662770-10662973)
chr4 (62-255)||(10876915-10877118)
chr4 (53-250)||(18065102-18065318)
chr4 (114-250)||(16315928-16316070)
chr4 (53-250)||(5021263-5021479)
chr4 (107-250)||(27665767-27665916)
chr4 (53-250)||(4989307-4989523)
chr4 (120-250)||(14837620-14837756)
chr4 (120-250)||(24649538-24649674)
chr4 (183-250)||(459839-459906)
chr4 (183-250)||(10742110-10742177)
chr4 (183-250)||(10955879-10955946)
chr4 (183-250)||(16265141-16265208)
chr4 (183-250)||(17927375-17927442)
chr4 (183-250)||(18131761-18131828)
chr4 (183-250)||(18754002-18754069)
chr4 (183-250)||(19945850-19945917)
chr4 (183-250)||(22005693-22005760)
chr4 (183-250)||(27175350-27175417)
chr4 (183-250)||(30928005-30928072)
chr4 (183-250)||(36027567-36027634)
chr4 (183-250)||(49516813-49516880)
chr4 (120-250)||(55746764-55746900)
chr4 (186-250)||(15195437-15195501)
chr4 (53-96)||(459690-459733)
chr4 (53-96)||(3380629-3380672)
chr4 (53-96)||(10742283-10742326)
chr4 (53-96)||(10956052-10956095)
chr4 (53-96)||(14837793-14837836)
chr4 (53-96)||(15198489-15198532)
chr4 (53-96)||(16264992-16265035)
chr4 (53-96)||(16315854-16315897)
chr4 (53-96)||(17927226-17927269)
chr4 (53-96)||(18131934-18131977)
chr4 (53-96)||(18754175-18754218)
chr4 (53-96)||(19946023-19946066)
chr4 (53-96)||(22005544-22005587)
chr4 (53-96)||(24649458-24649501)
chr4 (53-96)||(27175200-27175243)
chr4 (53-96)||(27665700-27665743)
chr4 (183-250)||(27816458-27816525)
chr4 (53-96)||(27816631-27816674)
chr4 (53-96)||(30928178-30928221)
chr4 (53-96)||(36027418-36027461)
chr4 (183-250)||(40455872-40455939)
chr4 (53-96)||(40456045-40456088)
chr4 (53-96)||(49516664-49516707)
chr4 (53-96)||(55746937-55746980)
chr4 (195-250)||(3380790-3380845)
chr4 (53-96)||(14712499-14712542)
chr4 (186-250)||(14712335-14712399)
chr4 (107-157)||(19945949-19945999)
[»] chr7 (61 HSPs)
chr7 (48-258)||(13680653-13680873)
chr7 (48-254)||(13878449-13878665)
chr7 (48-258)||(14171970-14172190)
chr7 (53-257)||(16547628-16547842)
chr7 (53-257)||(16617820-16618034)
chr7 (48-256)||(13173846-13174064)
chr7 (48-258)||(16311609-16311828)
chr7 (64-256)||(13028559-13028761)
chr7 (48-256)||(16669765-16669998)
chr7 (48-256)||(17644133-17644366)
chr7 (160-258)||(4413597-4413695)
chr7 (182-256)||(21212214-21212288)
chr7 (114-250)||(9168750-9168892)
chr7 (107-250)||(6868822-6868971)
chr7 (53-253)||(13176082-13176291)
chr7 (120-250)||(11014363-11014499)
chr7 (183-250)||(176134-176201)
chr7 (183-250)||(458578-458645)
chr7 (183-250)||(1996800-1996867)
chr7 (183-250)||(2707205-2707272)
chr7 (183-250)||(4221252-4221319)
chr7 (183-250)||(8626589-8626656)
chr7 (183-250)||(9442507-9442574)
chr7 (183-250)||(11003823-11003890)
chr7 (183-250)||(20988301-20988368)
chr7 (183-250)||(22098385-22098452)
chr7 (183-250)||(24743345-24743412)
chr7 (183-250)||(26391686-26391753)
chr7 (183-250)||(40043696-40043763)
chr7 (183-250)||(42875092-42875159)
chr7 (107-250)||(15879414-15879563)
chr7 (120-250)||(8003658-8003794)
chr7 (120-250)||(9093562-9093698)
chr7 (53-96)||(175985-176028)
chr7 (53-96)||(458751-458794)
chr7 (53-96)||(1996651-1996694)
chr7 (53-96)||(2707378-2707421)
chr7 (53-96)||(4221103-4221146)
chr7 (53-96)||(6868995-6869038)
chr7 (53-96)||(8003831-8003874)
chr7 (53-96)||(8626440-8626483)
chr7 (53-96)||(9093482-9093525)
chr7 (53-96)||(9168676-9168719)
chr7 (53-96)||(9442358-9442401)
chr7 (53-96)||(11003674-11003717)
chr7 (53-96)||(11014283-11014326)
chr7 (53-96)||(15879587-15879630)
chr7 (183-250)||(17951706-17951773)
chr7 (53-96)||(17951879-17951922)
chr7 (53-250)||(18439699-18439906)
chr7 (53-96)||(20988152-20988195)
chr7 (53-96)||(22098236-22098279)
chr7 (53-96)||(24743196-24743239)
chr7 (53-96)||(26391859-26391902)
chr7 (183-250)||(26654928-26654995)
chr7 (53-96)||(26655101-26655144)
chr7 (53-96)||(40043869-40043912)
chr7 (53-96)||(42874943-42874986)
chr7 (200-256)||(16106650-16106706)
chr7 (48-95)||(4413779-4413826)
chr7 (160-250)||(16309336-16309426)
[»] chr6 (60 HSPs)
chr6 (48-246)||(26940711-26940919)
chr6 (52-256)||(19450385-19450596)
chr6 (52-256)||(19448391-19448602)
chr6 (48-246)||(17926093-17926301)
chr6 (53-258)||(14054904-14055119)
chr6 (107-250)||(27502838-27502987)
chr6 (107-250)||(28253086-28253235)
chr6 (107-250)||(28331835-28331984)
chr6 (53-250)||(27383204-27383420)
chr6 (53-250)||(27473588-27473804)
chr6 (183-250)||(9114011-9114078)
chr6 (114-248)||(25804209-25804349)
chr6 (185-250)||(26042813-26042878)
chr6 (162-250)||(17447272-17447360)
chr6 (183-250)||(3670660-3670727)
chr6 (183-250)||(12718354-12718421)
chr6 (53-250)||(22307269-22307476)
chr6 (183-250)||(25984693-25984760)
chr6 (183-250)||(26034636-26034703)
chr6 (183-250)||(26874018-26874085)
chr6 (183-250)||(27350961-27351028)
chr6 (183-250)||(27411701-27411768)
chr6 (183-250)||(32302564-32302631)
chr6 (183-250)||(32963464-32963531)
chr6 (183-250)||(34808680-34808747)
chr6 (107-246)||(20031443-20031588)
chr6 (186-250)||(18553908-18553972)
chr6 (53-96)||(3670511-3670554)
chr6 (53-96)||(12863998-12864041)
chr6 (183-250)||(12864147-12864214)
chr6 (165-248)||(13138005-13138088)
chr6 (53-96)||(16958075-16958118)
chr6 (53-250)||(17610112-17610319)
chr6 (53-96)||(20031612-20031655)
chr6 (53-96)||(25984544-25984587)
chr6 (53-96)||(26034487-26034530)
chr6 (53-96)||(26042662-26042705)
chr6 (53-96)||(26873869-26873912)
chr6 (53-96)||(27350812-27350855)
chr6 (53-96)||(27411552-27411595)
chr6 (53-96)||(28253259-28253302)
chr6 (53-96)||(28332008-28332051)
chr6 (53-96)||(32302737-32302780)
chr6 (53-96)||(32963637-32963680)
chr6 (53-96)||(34808853-34808896)
chr6 (184-250)||(16958225-16958291)
chr6 (196-253)||(22385237-22385294)
chr6 (186-253)||(11204583-11204650)
chr6 (53-92)||(12718531-12718570)
chr6 (53-96)||(17056529-17056572)
chr6 (53-96)||(25723418-25723461)
chr6 (53-96)||(27502771-27502814)
chr6 (55-95)||(18553768-18553808)
chr6 (53-96)||(9114184-9114227)
chr6 (53-96)||(11204439-11204482)
chr6 (53-96)||(22385084-22385127)
chr6 (53-96)||(25804135-25804178)
chr6 (50-92)||(19874216-19874258)
chr6 (55-92)||(17447440-17447477)
chr6 (186-250)||(17062840-17062904)
[»] chr5 (93 HSPs)
chr5 (48-258)||(26782732-26782952)
chr5 (48-258)||(26763769-26763988)
chr5 (48-256)||(21200627-21200845)
chr5 (107-250)||(23394040-23394189)
chr5 (53-253)||(23486917-23487127)
chr5 (114-250)||(24981898-24982040)
chr5 (53-256)||(11209620-11209833)
chr5 (183-250)||(31420296-31420363)
chr5 (114-250)||(34053591-34053733)
chr5 (107-250)||(39354127-39354276)
chr5 (183-250)||(5299705-5299772)
chr5 (183-250)||(6977437-6977504)
chr5 (183-250)||(9337585-9337652)
chr5 (183-250)||(14031673-14031740)
chr5 (183-250)||(14456175-14456242)
chr5 (183-250)||(14567216-14567283)
chr5 (183-250)||(15741600-15741667)
chr5 (183-250)||(16002459-16002526)
chr5 (183-250)||(17608693-17608760)
chr5 (183-250)||(17720549-17720616)
chr5 (183-250)||(22148147-22148214)
chr5 (183-250)||(22677747-22677814)
chr5 (183-250)||(23297908-23297975)
chr5 (183-250)||(23363727-23363794)
chr5 (183-250)||(23698411-23698478)
chr5 (183-250)||(24568719-24568786)
chr5 (183-250)||(27051400-27051467)
chr5 (183-250)||(27461793-27461860)
chr5 (183-250)||(30236589-30236656)
chr5 (183-250)||(31350165-31350232)
chr5 (183-250)||(31835111-31835178)
chr5 (183-250)||(34773540-34773607)
chr5 (183-250)||(35217134-35217201)
chr5 (183-250)||(36591680-36591747)
chr5 (183-250)||(36689329-36689396)
chr5 (183-250)||(39500050-39500117)
chr5 (183-250)||(40391989-40392056)
chr5 (183-250)||(42044411-42044478)
chr5 (120-250)||(37739061-37739197)
chr5 (186-250)||(17455879-17455943)
chr5 (53-96)||(1120316-1120359)
chr5 (183-250)||(1120465-1120532)
chr5 (53-96)||(5299556-5299599)
chr5 (53-96)||(6977610-6977653)
chr5 (53-96)||(9337758-9337801)
chr5 (53-96)||(14031846-14031889)
chr5 (53-96)||(14456026-14456069)
chr5 (53-96)||(14567067-14567110)
chr5 (53-96)||(15741773-15741816)
chr5 (53-96)||(17455727-17455770)
chr5 (53-96)||(17608866-17608909)
chr5 (53-96)||(17720722-17720765)
chr5 (53-96)||(21704378-21704421)
chr5 (53-96)||(22148320-22148363)
chr5 (53-96)||(22677920-22677963)
chr5 (53-96)||(23298081-23298124)
chr5 (53-96)||(23363900-23363943)
chr5 (53-96)||(23394213-23394256)
chr5 (53-96)||(23698584-23698627)
chr5 (53-96)||(24568892-24568935)
chr5 (53-96)||(24809720-24809763)
chr5 (53-96)||(24825889-24825932)
chr5 (183-250)||(24826038-24826105)
chr5 (53-96)||(24981824-24981867)
chr5 (53-96)||(27051251-27051294)
chr5 (53-96)||(27461966-27462009)
chr5 (53-96)||(27621186-27621229)
chr5 (183-250)||(27621335-27621402)
chr5 (53-96)||(30236440-30236483)
chr5 (53-96)||(31350338-31350381)
chr5 (53-96)||(31420469-31420512)
chr5 (53-96)||(31835284-31835327)
chr5 (53-96)||(34053764-34053807)
chr5 (53-96)||(34773713-34773756)
chr5 (53-96)||(35217307-35217350)
chr5 (53-96)||(36689502-36689545)
chr5 (53-96)||(37738981-37739024)
chr5 (53-96)||(39499901-39499944)
chr5 (53-96)||(40392162-40392205)
chr5 (53-96)||(42044584-42044627)
chr5 (53-96)||(43620308-43620351)
chr5 (107-250)||(43620375-43620524)
chr5 (120-250)||(19465603-19465739)
chr5 (114-244)||(21704452-21704588)
chr5 (120-250)||(24809547-24809683)
chr5 (198-250)||(20553446-20553498)
chr5 (53-96)||(13532291-13532334)
chr5 (53-96)||(16002310-16002353)
chr5 (53-96)||(19465776-19465819)
chr5 (53-96)||(20553619-20553662)
chr5 (53-96)||(36591531-36591574)
chr5 (53-96)||(39354300-39354343)
chr5 (186-244)||(13532434-13532492)
[»] scaffold0022 (5 HSPs)
scaffold0022 (48-258)||(35743-35963)
scaffold0022 (48-258)||(133803-134023)
scaffold0022 (51-256)||(157451-157663)
scaffold0022 (183-250)||(45306-45373)
scaffold0022 (53-92)||(45518-45557)
[»] scaffold0317 (1 HSPs)
scaffold0317 (48-244)||(2546-2752)
[»] chr2 (56 HSPs)
chr2 (48-258)||(22253908-22254128)
chr2 (48-258)||(28702792-28703012)
chr2 (48-256)||(24723683-24723897)
chr2 (52-256)||(22783199-22783413)
chr2 (160-258)||(21137531-21137629)
chr2 (48-207)||(23185816-23185982)
chr2 (48-207)||(23597079-23597245)
chr2 (183-250)||(21163475-21163542)
chr2 (203-258)||(24574502-24574557)
chr2 (162-248)||(10900079-10900165)
chr2 (107-250)||(24416554-24416703)
chr2 (198-256)||(24842658-24842716)
chr2 (53-250)||(24329277-24329493)
chr2 (120-250)||(27230587-27230723)
chr2 (120-250)||(35262152-35262288)
chr2 (120-250)||(35272777-35272913)
chr2 (183-250)||(4219113-4219180)
chr2 (183-250)||(9899101-9899168)
chr2 (183-250)||(10276204-10276271)
chr2 (183-250)||(11396700-11396767)
chr2 (183-250)||(22916388-22916455)
chr2 (183-250)||(34791745-34791812)
chr2 (183-250)||(39171622-39171689)
chr2 (183-250)||(40249826-40249893)
chr2 (53-96)||(4218964-4219007)
chr2 (183-250)||(9764291-9764358)
chr2 (53-96)||(9764464-9764507)
chr2 (53-96)||(9899274-9899317)
chr2 (53-96)||(10276055-10276098)
chr2 (53-96)||(11396873-11396916)
chr2 (53-96)||(21163648-21163691)
chr2 (53-96)||(26876036-26876079)
chr2 (114-250)||(26876110-26876252)
chr2 (53-96)||(27230507-27230550)
chr2 (53-96)||(28723019-28723062)
chr2 (53-96)||(29253288-29253331)
chr2 (53-96)||(34791918-34791961)
chr2 (53-96)||(35262072-35262115)
chr2 (53-96)||(35272697-35272740)
chr2 (53-96)||(39171795-39171838)
chr2 (53-96)||(40249677-40249720)
chr2 (183-250)||(43091896-43091963)
chr2 (53-96)||(43353498-43353541)
chr2 (183-250)||(43353647-43353714)
chr2 (186-250)||(19303956-19304020)
chr2 (186-250)||(24303627-24303691)
chr2 (186-246)||(28722850-28722910)
chr2 (53-96)||(19301671-19301714)
chr2 (53-96)||(19304120-19304163)
chr2 (53-96)||(22916561-22916604)
chr2 (53-96)||(24416727-24416770)
chr2 (53-96)||(24803343-24803386)
chr2 (183-250)||(29253437-29253504)
chr2 (53-96)||(43091747-43091790)
chr2 (195-253)||(24803176-24803234)
chr2 (185-245)||(21919643-21919703)
[»] chr1 (45 HSPs)
chr1 (48-256)||(18613475-18613693)
chr1 (48-249)||(17720183-17720391)
chr1 (52-258)||(25449822-25450038)
chr1 (48-256)||(21196259-21196474)
chr1 (52-258)||(21125928-21126144)
chr1 (48-210)||(22444931-22445103)
chr1 (48-210)||(22450165-22450337)
chr1 (52-258)||(21207377-21207593)
chr1 (48-256)||(23023176-23023394)
chr1 (48-234)||(20943070-20943272)
chr1 (206-258)||(22431528-22431580)
chr1 (107-250)||(4176424-4176573)
chr1 (107-250)||(7691021-7691170)
chr1 (53-253)||(22017627-22017837)
chr1 (107-250)||(35639589-35639738)
chr1 (183-250)||(3180805-3180872)
chr1 (183-250)||(5641260-5641327)
chr1 (183-250)||(5842408-5842475)
chr1 (183-250)||(7516478-7516545)
chr1 (183-250)||(12615873-12615940)
chr1 (183-250)||(12739732-12739799)
chr1 (183-250)||(21876352-21876419)
chr1 (183-250)||(36237980-36238047)
chr1 (183-250)||(38093663-38093730)
chr1 (183-250)||(38104289-38104356)
chr1 (183-250)||(47609486-47609553)
chr1 (183-250)||(51630742-51630809)
chr1 (53-96)||(3180656-3180699)
chr1 (53-96)||(5641440-5641483)
chr1 (53-96)||(5842259-5842302)
chr1 (53-96)||(7516329-7516372)
chr1 (53-96)||(7691194-7691237)
chr1 (53-96)||(12616046-12616089)
chr1 (183-250)||(19186409-19186476)
chr1 (53-250)||(20874779-20874986)
chr1 (53-96)||(21876203-21876246)
chr1 (53-96)||(35639762-35639805)
chr1 (53-96)||(36238153-36238196)
chr1 (53-96)||(38104140-38104183)
chr1 (53-96)||(47609659-47609702)
chr1 (53-96)||(51630915-51630958)
chr1 (53-96)||(4176357-4176400)
chr1 (53-96)||(19186260-19186303)
chr1 (54-96)||(12739584-12739626)
chr1 (51-96)||(27857098-27857143)
[»] scaffold0084 (1 HSPs)
scaffold0084 (48-258)||(47624-47843)
[»] scaffold0004 (1 HSPs)
scaffold0004 (48-258)||(209713-209933)
[»] scaffold0083 (1 HSPs)
scaffold0083 (48-229)||(43324-43515)
[»] scaffold0056 (1 HSPs)
scaffold0056 (52-258)||(27228-27444)
[»] scaffold0035 (1 HSPs)
scaffold0035 (48-258)||(111179-111399)
[»] scaffold0389 (1 HSPs)
scaffold0389 (49-250)||(12264-12472)
[»] scaffold0047 (3 HSPs)
scaffold0047 (48-256)||(6967-7182)
scaffold0047 (120-250)||(34454-34590)
scaffold0047 (53-96)||(34627-34670)
[»] scaffold0161 (2 HSPs)
scaffold0161 (48-256)||(11651-11869)
scaffold0161 (48-256)||(16324-16542)
[»] scaffold0011 (2 HSPs)
scaffold0011 (55-258)||(66960-67173)
scaffold0011 (53-256)||(166247-166460)
[»] scaffold0315 (1 HSPs)
scaffold0315 (48-256)||(6979-7193)
[»] scaffold0498 (1 HSPs)
scaffold0498 (48-246)||(1782-1990)
[»] scaffold0217 (2 HSPs)
scaffold0217 (160-258)||(17549-17647)
scaffold0217 (48-98)||(14581-14631)
[»] scaffold0116 (1 HSPs)
scaffold0116 (48-216)||(25711-25888)
[»] scaffold0012 (1 HSPs)
scaffold0012 (53-253)||(3057-3267)
[»] scaffold0630 (1 HSPs)
scaffold0630 (53-144)||(3840-3935)
[»] scaffold0038 (1 HSPs)
scaffold0038 (183-250)||(53286-53353)
[»] scaffold0017 (2 HSPs)
scaffold0017 (53-253)||(44735-44945)
scaffold0017 (53-253)||(55038-55248)
[»] scaffold0211 (2 HSPs)
scaffold0211 (53-256)||(1235-1448)
scaffold0211 (185-256)||(1089-1160)
[»] scaffold0037 (1 HSPs)
scaffold0037 (53-250)||(75576-75784)
[»] scaffold0272 (1 HSPs)
scaffold0272 (53-250)||(23737-23953)
[»] scaffold0105 (2 HSPs)
scaffold0105 (183-250)||(38506-38573)
scaffold0105 (53-96)||(38679-38722)
[»] scaffold1820 (1 HSPs)
scaffold1820 (186-256)||(84-154)
[»] scaffold0382 (1 HSPs)
scaffold0382 (53-253)||(2838-3049)
[»] scaffold1507 (1 HSPs)
scaffold1507 (53-250)||(931-1138)
[»] scaffold0068 (2 HSPs)
scaffold0068 (53-96)||(9489-9532)
scaffold0068 (114-244)||(9322-9458)
[»] scaffold0042 (1 HSPs)
scaffold0042 (53-250)||(3796-4003)
[»] scaffold0925 (2 HSPs)
scaffold0925 (196-253)||(3775-3832)
scaffold0925 (53-96)||(3942-3985)
[»] scaffold0758 (1 HSPs)
scaffold0758 (185-253)||(2807-2875)
[»] scaffold0892 (1 HSPs)
scaffold0892 (53-96)||(122-165)
[»] scaffold0443 (1 HSPs)
scaffold0443 (204-258)||(2555-2609)
[»] scaffold0185 (1 HSPs)
scaffold0185 (195-253)||(31752-31810)
[»] scaffold0231 (1 HSPs)
scaffold0231 (55-145)||(20161-20255)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 15976648 - 15976868
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    |||||||||||||||||||||||||||||||  |||| ||    
T  15976648 agtaggatcttcatcagaatctccatcaggtgattcttcttcaaattcaacaactttaagagcttttgatgacttccctttagatggtagagtaatgtat 15976747  T
Q  144 ttactattcttagaaggtt------cattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||| |||||||||      |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15976748 ttactcttcctagaaggtttatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 15976847  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  15976848 cctcaatagcagtcacctttg 15976868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 21603941 - 21603723
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  21603941 agtagaatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatagat 21603842  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| ||      ||||||||||||||||| |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  21603841 ttactcttcttagcagactcatgttcattaagacttatctcatggactttgagagagctaacaagatcttcaacacttaaagtgtttaaatctttagctt 21603742  T
Q  238 cctcaatagcagtcacctt 256  Q
    ||||||||||||| |||||    
T  21603741 cctcaatagcagtaacctt 21603723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 46 - 247
Target Start/End: Original strand, 17014866 - 17015077
Alignment:
Q  46 taagtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatgg 141  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    |||||||||||||||||||||||||| |||| |||| |    
T  17014866 taagtaggatcttcatcagaatcttcatcaggtgattcctcttcagattcaacaactttaagagcttttgatgacttccctttagatgatagagcaatag 17014965  T
Q  142 atttactattcttagaaggttc------attaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagt 235  Q
    ||||||| ||| ||||||||||      ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17014966 atttactcttcctagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagc 17015065  T
Q  236 ttcctcaatagc 247  Q
    ||||||||||||    
T  17015066 ttcctcaatagc 17015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 17288001 - 17287786
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    |||||||||||| || | |||| ||||||||||||||| ||||||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  17288001 gatcttcatcaggatcttcatcgggtgattcttcttcatattcaacaactttaagagcttttgatgacttcccttttgatggtagagcaatggatttact 17287902  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     || |||||||||||||      ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17287901 ctttttagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctca 17287802  T
Q  243 atagcagtcacctttg 258  Q
    ||||||||||||||||    
T  17287801 atagcagtcacctttg 17287786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 46 - 247
Target Start/End: Complemental strand, 17542335 - 17542124
Alignment:
Q  46 taagtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatgg 141  Q
    |||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||    |||||||||||||||||||||||||| |||| |||| |    
T  17542335 taagtaggatcttcatcagaatcttcatcaggtgattcctcttcagattcaacaactttaagagcttttgatgacttccctttagatgatagagcaatag 17542236  T
Q  142 atttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagt 235  Q
    ||||||| ||| ||||||||||||      ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17542235 atttactcttcctagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagc 17542136  T
Q  236 ttcctcaatagc 247  Q
    ||||||||||||    
T  17542135 ttcctcaatagc 17542124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 48 - 257
Target Start/End: Complemental strand, 20257408 - 20257189
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    || ||||||||| |||||||||||||||| | |||| |||    
T  20257408 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagtttttgatgaattccctttagatggtatatcaatagat 20257309  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||  ||      ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20257308 ttactcttcttaccagactcatgttcattaagacttatctcatgaacttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 20257209  T
Q  238 cctcaatagcagtcaccttt 257  Q
    ||||||||||||||||||||    
T  20257208 cctcaatagcagtcaccttt 20257189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 25164577 - 25164797
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  25164577 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagatcaatagat 25164676  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| |  |||  ||      ||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  25164677 ttactctctttaacaggttcatgttcattaagacttatttcatgaactttgagagagctgacaagatcttcagcacttaaaatgtttaaatctttagttt 25164776  T
Q  238 cctcaatagcagtcacctttg 258  Q
     |||||||||||| |||||||    
T  25164777 tctcaatagcagtaacctttg 25164797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 19940404 - 19940624
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||| ||||||||| ||||||||    
T  19940404 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaactttaagagcttttgatgacttcccttttgatggtagagcaatggat 19940503  T
Q  144 ttactattcttag------aaggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    || || |||||||       | ||||||||||||| ||| ||| ||||||||||  |||||||||||||||||||||||||||||| |||||||||| ||    
T  19940504 ttgcttttcttagtcgactcatgttcattaagactaatctcatgaactttgagaacgctgacaagatcttcaacacttaaagtgttcaaatctttagctt 19940603  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||| ||||||||||||    
T  19940604 cctcaatatcagtcacctttg 19940624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 22672095 - 22672315
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||| ||||| |    ||||||||||||||| ||| | ||||||||| ||||||||    
T  22672095 agtaggatcttcatcaaaatccccatcaggtgattcttcttcagattccacaacctttaaagcttttgatgactttcctcttgatggtagagcaatggat 22672194  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    || || ||||| ||||      ||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  22672195 ttgcttttcttggaagattcatgttcattaatacttatctcatgaactttgagagagctgacaagatcctcaacacttaaagtgtttaaatctttagctt 22672294  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  22672295 cctcaatagcagtcacctttg 22672315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 258
Target Start/End: Complemental strand, 18152836 - 18152638
Alignment:
Q  70 ccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------ 159  Q
    |||||||||||||||||||||||||| ||||| |    ||||||||||||||| ||| | ||||||||| |||||||||| || ||||| ||||          
T  18152836 ccatcaggtgattcttcttcagattccacaacctttaaagcttttgatgactttcctcttgatggtagagcaatggatttgcttttcttggaagattcat 18152737  T
Q  160 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||||||||||||||| ||| || |||||||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18152736 gttcattaagacttatctcatgaaatttgagagagctcaccagatcctcaacacttagagtgtttaaatctttagtttcctcaatagcagtcacctttg 18152638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 20260671 - 20260483
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    |||||| |||||||||||||||||||||||| |||| | |    
T  20260671 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaaaaactttaagagctttagatgacttccctttagatggtagagcaataggt 20260572  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaa 226  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||| |||||| || |||||||||||||||||||||||||| ||||    
T  20260571 ttactcttcttagcaggttcatgttcattaagacttatctcatgaacgttgagatagttgacaagatcttcaacacttaaagtgcttaa 20260483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 48 - 226
Target Start/End: Complemental strand, 21047301 - 21047113
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    |||||| |||||||||||||||||||||||| |||| | |    
T  21047301 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaaaaactttaagagctttagatgacttccctttagatggtagagcaataggt 21047202  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaa 226  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||| |||||| || |||||||||||||||||||||||||| ||||    
T  21047201 ttactcttcttagcaggttcatgttcattaagacttatctcatgaacgttgagatagttgacaagatcttcaacacttaaagtgcttaa 21047113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 19941537 - 19941755
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||| | |||||||||||| ||||||||| ||| || |||||    || |||||||||||||||||| ||||||||| |||| |||    
T  19941537 agtaggatcttcatcagagtctccatcaggtgactcttcttcaaatttaataactttaagagattttgatgacttcccttttgatggtagagcaatagat 19941636  T
Q  144 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| || |||| | |      |||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  19941637 ttactcttgttagcatgctcatgttcatttagacttatctcatgaaccttgaaagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 19941736  T
Q  238 cctcaatagcagtcacctt 256  Q
    ||||||||| ||| |||||    
T  19941737 cctcaatagtagtaacctt 19941755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 256
Target Start/End: Complemental strand, 22463180 - 22463084
Alignment:
Q  160 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    ||||||| || |||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| |||||    
T  22463180 gttcatttaggcttatctcatgaaccttgagagagctgacaagatcttcaacacttaaagagtttaaatttttagcttcctcaatagcagtaacctt 22463084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 13690262 - 13690113
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  13690262 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 13690163  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  13690162 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 13690113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 19233959 - 19234108
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||||||||| ||||||||||||| | |||||||| |||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  19233959 ttttgatgactttcctttagatggtaaagcaatggatctactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 19234058  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  19234059 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 19234108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 29085505 - 29085721
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  29085505 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggctttggaagattttgaagtctttcctttagatggtaaagcaat 29085604  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||    
T  29085605 ggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtatttagatcctta 29085704  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  29085705 gcttcctcaatagcagt 29085721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 19427505 - 19427652
Alignment:
Q  109 ttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaag 202  Q
    |||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||||    
T  19427505 ttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaacaag 19427604  T
Q  203 atcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  19427605 atcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 19427652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 3350245 - 3350178
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  3350245 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3350178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 9366957 - 9367024
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9366957 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9367024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 15782321 - 15782254
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  15782321 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 15782254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 26119573 - 26119640
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26119573 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26119640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 30316335 - 30316268
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  30316335 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30316268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 32079306 - 32079239
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  32079306 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32079239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 36087185 - 36087252
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36087185 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36087252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 36302189 - 36302256
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36302189 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36302256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 44490377 - 44490444
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  44490377 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 44490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 256
Target Start/End: Original strand, 21297246 - 21297459
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    |||||| |||||||| |||||| |||||||||||||||||||||  | | | |    |||| |||||||| ||||||||||||||| |||| |||||| |    
T  21297246 gatcttgatcagaatctccatctggtgattcttcttcagattcactagccttgtatgctttagatgactttcctttagatggtagagcaatagatttatt 21297345  T
Q  149 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||| | || |      | ||||| || || ||  ||| ||| ||||| || || ||||||||||||||||| |||||||||| ||| |||| |||||||    
T  21297346 cttccttgaggactcatgctcattcaggctcatttcatgaaccttgagggaactaacaagatcttcaacactcaaagtgtttagatccttagcttcctca 21297445  T
Q  243 atagcagtcacctt 256  Q
    || |||||||||||    
T  21297446 atggcagtcacctt 21297459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 16745667 - 16745731
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  16745667 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 16745731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 250922 - 250965
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  250922 gatcttcatcagaatctccatcaggtgattcttcttcagattca 250965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 251071 - 251138
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  251071 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 251138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 814023 - 814066
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  814023 gatcttcatcagaatctccatcaggtgattcttcttcagattca 814066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 814172 - 814239
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  814172 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 814239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 3350394 - 3350351
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3350394 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3350351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 3842052 - 3842259
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  3842052 gatcttcatcagaatctccatctggtgactcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 3842151  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  3842152 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 3842251  T
Q  243 atagcagt 250  Q
    || |||||    
T  3842252 atggcagt 3842259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 9366808 - 9366851
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9366808 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9366851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 13690329 - 13690286
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13690329 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13690286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 15782470 - 15782427
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15782470 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15782427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 16745515 - 16745558
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16745515 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16745558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 19137794 - 19137837
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19137794 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19137837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 19137943 - 19138010
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||    
T  19137943 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 19138010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 19233892 - 19233935
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19233892 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19233935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 19427436 - 19427479
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19427436 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19427479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 26119424 - 26119467
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26119424 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26119467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 29075254 - 29075297
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  29075254 gatcttcatcagaatctccatcaggtgattcttcttcagattca 29075297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 29075403 - 29075470
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||| |||| |||| ||| |||| |||||||||||||||    
T  29075403 actttgagtgagctaacaagatcttcaacacttcaagtatttagatccttagcttcctcaatagcagt 29075470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 30316484 - 30316441
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30316484 gatcttcatcagaatctccatcaggtgattcttcttcagattca 30316441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 32079455 - 32079412
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  32079455 gatcttcatcagaatctccatcaggtgattcttcttcagattca 32079412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 36087036 - 36087079
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36087036 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36087079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 44490228 - 44490271
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  44490228 gatcttcatcagaatctccatcaggtgattcttcttcagattca 44490271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 23791755 - 23791798
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  23791755 gatcttcatcagaatctccatctggtgattcttcttcagattca 23791798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 36302040 - 36302083
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||    
T  36302040 gatcttcatcagaatctccatcaggtgattcttgttcagattca 36302083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 23791898 - 23791956
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 244  Q
    ||||| || ||||||||||| |||||||| |||||||||| ||| |||| |||||||||    
T  23791898 ttgagggaactgacaagatcctcaacactcaaagtgtttagatccttagcttcctcaat 23791956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 22149212 - 22149148
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| || ||||||| ||| |||| |||| |||| |||||    
T  22149212 ttgagggaactgacaagatcttcaacactcaaggtgtttagatccttagcttccacaatggcagt 22149148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 7484 - 7264
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  7484 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatggat 7385  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||  ||||||      ||||||||||||||||| ||| || |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||    
T  7384 ttactctttctagaaggttcatgttcattaagacttatctcatgaagtttgagagagctgacaagattttcaacacttaaagtgtttaaatatttagctt 7285  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  7284 cctcaatagcagtcacctttg 7264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 2559507 - 2559727
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    || |||||||||||||||||| ||||||||| ||||| ||    
T  2559507 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagtttttgatgacttcccttttgatggtagagcaatgaat 2559606  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||||||      ||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||    
T  2559607 ttactcttcttagaaggttcatgttcattaagacttatctcatgaactttgagagagttgacaagatcttcaacacttaaagtgtttaaatcattagctt 2559706  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  2559707 cctcaatagcagtcacctttg 2559727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 18123499 - 18123279
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||    ||||||||||||||||||||| ||||||||| |||| |||    
T  18123499 agtaggatcttcatcagaatctccatcagatgattcttcttcagattcaataactttaagagcttttgatgacttcccttttgatggtagagcaatagat 18123400  T
Q  144 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||||||||||||      ||||||||||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||    
T  18123399 ttactcttcttagaaggttcatgttcattaagacttatctcatgaactttgagagagttaacaagatcttcaacacttaaagtgtttaaatctttagctt 18123300  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  18123299 cctcaatagcagtcacctttg 18123279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 11188308 - 11188528
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||| ||||||| | ||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||| ||    
T  11188308 agtaggatcttcttcagaatcttcatcatgtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatgaat 11188407  T
Q  144 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| |||||||||||      |||||||| ||||||| |||||||||||||||||||  |||||||||||||| || |||||||||||||||||| ||    
T  11188408 ttactcttcttagaaggttcatattcattaaaacttatctcataaactttgagagagctatcaagatcttcaacatttgaagtgtttaaatctttagctt 11188507  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  11188508 cctcaatagcagtcacctttg 11188528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 17245033 - 17244813
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||    || |||||||||||||||||||||||||||||||||  ||    
T  17245033 agtaggatcttcatcagaatctccattaggtgattcttctttagattcaacaactttaagagtttttgatgacttccctttagatggtagaacaataaat 17244934  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| |||||| |||||||| |||||||||||||||| |||||||||||||||||||| ||    
T  17244933 ttactcttcttagcaggctcatgttcattaagacttatctcatgaacttttagagagcttacaagatcttcaacacgtaaagtgtttaaatctttagctt 17244834  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||| |||| |||||||    
T  17244833 cctcaataacagtaacctttg 17244813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 14908518 - 14908303
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||||||||  |||   |||||||| ||||||||||||||||||||| |||| ||||    
T  14908518 agtaggatcttcatctgaatctccatcaggtgaatcttcttcagattcaaca--ttaagagcttttgaagacttccctttagatggtagagcaattgatt 14908421  T
Q  145 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 238  Q
    |||| ||||||| ||      ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  14908420 tactcttcttagcagaatcatgttcatttagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgttaaaatctttagcttc 14908321  T
Q  239 ctcaatagcagtcacctt 256  Q
    |||||||||||| |||||    
T  14908320 ctcaatagcagtaacctt 14908303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 16029327 - 16029541
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta----gcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| |||||     |||||||||||||||||||||||||||||| ||||||||||||    
T  16029327 ggatcttcatcagaatctccatcaggtgactcttcttcagattcaataactttaagcgcttttgatgacttccctttagatggtagagcaatggatttac 16029426  T
Q  148 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | ||||||| ||      ||||||| ||||||| | ||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  16029427 tcttcttagcaggttcatgttcatttagacttacctcatgaatcttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcatc 16029526  T
Q  242 aatagcagtcacctt 256  Q
    ||||||||| |||||    
T  16029527 aatagcagtaacctt 16029541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 79 - 256
Target Start/End: Complemental strand, 19886897 - 19886712
Alignment:
Q  79 gattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaa 168  Q
    |||||||||| ||||||||||||||    ||||||||||||||||||||||||||||||| ||||  ||||||| ||||||| |       |||||||||    
T  19886897 gattcttcttaagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaat--atttactcttcttagcatactcatgttcattaa 19886800  T
Q  169 gacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    |||||||| ||| |||||||||||||||||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||    
T  19886799 gacttatctcatgaactttgagagagctgacaatatcttcaacacttgaagtgtttaaatctctaggttcctcaatagcagtaacctt 19886712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 170 - 258
Target Start/End: Original strand, 5211122 - 5211210
Alignment:
Q  170 acttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||||| ||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5211122 acttatctcatgaactttgagagagctgacaagatcctcagcacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 5211210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 258
Target Start/End: Complemental strand, 53058433 - 53058347
Alignment:
Q  172 ttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||    
T  53058433 ttatctcatgaactttgagagagctgacaagattttcaacactcaaagtttttaaatctttagcttcctcaatagcagttacctttg 53058347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 104 - 250
Target Start/End: Complemental strand, 14079103 - 14078951
Alignment:
Q  104 agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctg 197  Q
    |||||||||  |||| ||||||||||||||| |||| |||||| | ||||||| ||      | ||||||||||| |||  || ||| |||||||||||     
T  14079103 agcttttgagaactttcctttagatggtagagcaatagatttagtcttcttagcagaatcatgctcattaagactaatcttatgaaccttgagagagctc 14079004  T
Q  198 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  14079003 ataagatcttcaacacttaaagtgtttaaatctttagcttcctcaataacagt 14078951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 9382388 - 9382172
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca--------acaa-ctt----agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||        | || |||    || ||| || ||||||||||||||||||||| ||||    
T  9382388 gatcttcatcagaatctccatcaggtgattcttcttcagattcactggccttataagctttagaagatttggaggacttccctttagatggtagagcaat 9382289  T
Q  140 ggatttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
     |||||||| ||||||||      | | ||||| ||||| ||  |||  ||||||||  | ||||||||||||||||||||||||||||||| ||| |||    
T  9382288 agatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgaggaaactgacaagatcttcaacacttaaagtgtttagatcctta 9382189  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  9382188 gcttcctcaatagcagt 9382172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 11207745 - 11207603
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| |||||||||||||||||||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  11207745 gactttcctttagatggtagaacaatagatttactcttcttagaggactcatgctcattcagactcatttcatgcactttgagggaactgacaagatctt 11207646  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||    
T  11207645 caacactcaaagtgtttagatccttagcttcctcaatagcagt 11207603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 253
Target Start/End: Original strand, 17016297 - 17016507
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| ||||    
T  17016297 gatcttcatcagaatctccatctggtgaatcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctact 17016396  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || | |||||      | ||||| ||  ||| |||| |||| || ||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  17016397 cttctttgaggattcatgctcattcagactcatttcatgaactctgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctca 17016496  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  17016497 atggcagtcac 17016507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 9983612 - 9983396
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  9983612 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 9983513  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  9983512 ggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcatta 9983413  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  9983412 gcttcctcaatagcagt 9983396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 48 - 103
Target Start/End: Original strand, 5211048 - 5211103
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt 103  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  5211048 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaactt 5211103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 6183541 - 6183474
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||    
T  6183541 actttgagtgagctaacaagatcttcaacacttaaagtatttaaatccttagcttcctcaatagcagt 6183474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 10628523 - 10628456
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  10628523 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 10628456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 13374243 - 13374176
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  13374243 actttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 13374176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 13384837 - 13384770
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  13384837 actttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 13384770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 16397595 - 16397528
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  16397595 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 16397528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 11274042 - 11273893
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  11274042 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 11273943  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  11273942 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11273893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 12239275 - 12239126
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||| ||||||||  |||| |||    
T  12239275 ttttgaagtctttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatatactttgagtaagctaaca 12239176  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  12239175 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 12239126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 12288704 - 12288488
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  12288704 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 12288605  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||| ||||||||||||||||||| ||| |||    
T  12288604 ggatttactcttcttagaggattcatgctcgtttaaactcatttcatgcactttgagtgagctaacaagatcctcaacacttaaagtgtttagatcctta 12288505  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  12288504 gcttcctcaatagcagt 12288488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 28315882 - 28315746
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  28315882 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 28315783  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  28315782 ttaaagtatttagatccttagcttcctcaatagcagt 28315746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 38203845 - 38203981
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  38203845 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 38203944  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  38203945 ttaaagtatttagatccttagcttcctcaatagcagt 38203981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 4752981 - 4753048
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4752981 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4753048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 5538596 - 5538529
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5538596 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5538529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 5581208 - 5581141
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5581208 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5581141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 5867271 - 5867204
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5867271 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5867204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 6491921 - 6491854
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||| ||||||||||||||||||| ||| |||| |||||||||||||||    
T  6491921 actttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 6491854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 7796196 - 7796129
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  7796196 actttgagtgaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 7796129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 8997601 - 8997459
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||| | |||||||| | |||||      ||||||| ||  |||  || ||||| || |||||||||||||    
T  8997601 gactttcctttagatggtagagcaatagatttattcttcttagaggattcatgctcattaagactcatttcatgtaccttgagggaactgacaagatctt 8997502  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||    
T  8997501 caacacttaaagtgtttagatccttagcttcctcaatggcagt 8997459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 14474883 - 14474950
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14474883 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14474950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 16392623 - 16392556
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  16392623 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16392556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 19787684 - 19787751
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  19787684 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 19787751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 23766556 - 23766623
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23766556 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23766623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 24385093 - 24385026
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24385093 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24385026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 24669132 - 24669199
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24669132 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24669199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 29462793 - 29462726
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  29462793 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 29462726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 29935278 - 29935071
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  29935278 gatcttcatcaaaatctccatcaggtgattcttcttcagattcattggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 29935179  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  29935178 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 29935079  T
Q  243 atagcagt 250  Q
    || |||||    
T  29935078 atggcagt 29935071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 29984432 - 29984225
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  29984432 gatcttcatcaaaatctccatcaggtgattcttcttcagattcattggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 29984333  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  29984332 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 29984233  T
Q  243 atagcagt 250  Q
    || |||||    
T  29984232 atggcagt 29984225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 39381346 - 39381413
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39381346 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39381413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 41692911 - 41692978
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  41692911 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 41692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 8783856 - 8783992
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  8783856 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 8783955  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  8783956 ttaaagtatttagatccttagcttcctcaatggcagt 8783992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 12754347 - 12754290
Alignment:
Q  196 tgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  12754347 tgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcac 12754290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 1785649 - 1785585
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  1785649 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 1785585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 4432425 - 4432489
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  4432425 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 4432489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 14312984 - 14312920
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||||||| |||||    
T  14312984 ttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagt 14312920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 505745 - 505678
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  505745 actttaagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 505678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 505894 - 505851
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  505894 gatcttcatcagaatctccatcaggtgattcttcttcagattca 505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 4432273 - 4432316
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4432273 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4432316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 4752832 - 4752875
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4752832 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4752875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 5519381 - 5519424
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5519381 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5519424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 5519530 - 5519597
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  5519530 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 5519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 5538745 - 5538702
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5538745 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5538702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 5581357 - 5581314
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5581357 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5581314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 5867420 - 5867377
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5867420 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5867377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 6183690 - 6183647
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6183690 gatcttcatcagaatctccatcaggtgattcttcttcagattca 6183647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 8783776 - 8783819
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8783776 gatcttcatcagaatctccatcaggtgattcttcttcagattca 8783819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 10628672 - 10628629
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10628672 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10628629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 11274109 - 11274066
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11274109 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11274066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 13130783 - 13130826
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13130783 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13130826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 13130932 - 13130999
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||| |||||||||    
T  13130932 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttccttaatagcagt 13130999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 13263323 - 13263181
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| ||  ||||||||||||    
T  13263323 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggatttgacaagatctt 13263224  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||| ||| |||| ||||||||| |||||    
T  13263223 caacacttaaagtgtttagatccttagcttcctcaatggcagt 13263181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 13374392 - 13374349
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13374392 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 13384986 - 13384943
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  13384986 gatcttcatcagaatctccatcaggtgattcttcttcagattca 13384943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 14474734 - 14474777
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14474734 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14474777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 253
Target Start/End: Original strand, 15847571 - 15847626
Alignment:
Q  198 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    |||||||||||||||||||||||||||| ||| |||| ||||||||| ||||||||    
T  15847571 acaagatcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcac 15847626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 16306701 - 16306630
Alignment:
Q  185 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    |||||||||||||| ||||||||||||||||| |||  ||| ||| |||| |||||||||||||||| ||||    
T  16306701 tttgagagagctgataagatcttcaacacttatagtacttagatccttagcttcctcaatagcagtctcctt 16306630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 16392772 - 16392729
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16392772 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16392729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 16397744 - 16397701
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16397744 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16397701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 19787535 - 19787578
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19787535 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19787578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 20674772 - 20674705
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| || || ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  20674772 actttgagtgaactaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 20674705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 20674921 - 20674878
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20674921 gatcttcatcagaatctccatcaggtgattcttcttcagattca 20674878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 24385242 - 24385199
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24385242 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24385199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 24668983 - 24669026
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24668983 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24669026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 37875574 - 37875617
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37875574 gatcttcatcagaatctccatcaggtgattcttcttcagattca 37875617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 37884092 - 37884135
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37884092 gatcttcatcagaatctccatcaggtgattcttcttcagattca 37884135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 38203765 - 38203808
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38203765 gatcttcatcagaatctccatcaggtgattcttcttcagattca 38203808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 39381197 - 39381240
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39381197 gatcttcatcagaatctccatcaggtgattcttcttcagattca 39381240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 41692762 - 41692805
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  41692762 gatcttcatcagaatctccatcaggtgattcttcttcagattca 41692805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 37875724 - 37875790
Alignment:
Q  184 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||||||| |||||    
T  37875724 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37875790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 37884242 - 37884308
Alignment:
Q  184 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||||||| |||||    
T  37884242 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 37884308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 7796345 - 7796302
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||| | ||||||||||||||||||||||||||||    
T  7796345 gatcttcatcagattctccatcaggtgattcttcttcagattca 7796302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 8997675 - 8997632
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  8997675 gatcttcatcagaatctccatctggtgattcttcttcagattca 8997632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 11207819 - 11207776
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| | ||||||||||||||||||||||||||    
T  11207819 gatcttcatcagaatcttcatcaggtgattcttcttcagattca 11207776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 12239342 - 12239299
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||    
T  12239342 gatcttcatcagaatctccatcaggtgattcatcttcagattca 12239299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 13263397 - 13263354
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13263397 gatcttcatcataatctccatcaggtgattcttcttcagattca 13263354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 23766407 - 23766450
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  23766407 gatcttcattagaatctccatcaggtgattcttcttcagattca 23766450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 28315962 - 28315919
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  28315962 gatcttcatcagaatctccatcaggtgattcttctacagattca 28315919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 1062800 - 1062864
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| || ||||||| ||| |||| ||||||||| |||||    
T  1062800 ttgagggaactgacaagatcttcaacactcaaggtgtttagatccttagcttcctcaatggcagt 1062864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 6492070 - 6492027
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||    
T  6492070 gatcttcgtcagactctccatcaggtgattcttcttcagattca 6492027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 14313136 - 14313093
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||    
T  14313136 gatcttcatcagaatctccatcttgtgattcttcttcagattca 14313093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 15847431 - 15847474
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  15847431 gatcttcatcagaatctccgtctggtgattcttcttcagattca 15847474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Complemental strand, 15652681 - 15652623
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 244  Q
    ||||| || |||| ||||||||||||||| |||||||||| ||| |||| |||||||||    
T  15652681 ttgagggaactgataagatcttcaacactcaaagtgtttagatccttagcttcctcaat 15652623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 49 - 258
Target Start/End: Complemental strand, 14906123 - 14905904
Alignment:
Q  49 gtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||||||||    
T  14906123 gtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaacagcttttgatgacttccctttagatggtagagcaatggatt 14906024  T
Q  145 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 238  Q
    |||| ||| ||||||      ||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||  |||    
T  14906023 tactcttcctagaaggttcatgttcattaagacttatctcatgaactttgagagagctgacaagaacttcaacacttaaagtgttcaaatctttaccttc 14905924  T
Q  239 ctcaatagcagtcacctttg 258  Q
    | ||||||||||||||||||    
T  14905923 cgcaatagcagtcacctttg 14905904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 16852220 - 16852440
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  16852220 agtaggatcctcatcagaatctccatcaggtgattcttcttcagattccacaactttgagagcttttgatgacttccctttagatggtagagcaatggat 16852319  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    || || |||||||| |      ||||||||||||| ||| ||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  16852320 ttgcttttcttagatgactcatgttcattaagactaatctcatgaacttttagagagctgacaagatcttcaacacttaaagtgttcaaatctttagctt 16852419  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  16852420 cctcaatagcagtcacctttg 16852440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 17245882 - 17246102
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    |  ||||||||||||||||||  |||||||| ||||||||    
T  17245882 agtaggatcttcatcagaatctccatcatgtgattcttcttcagattcaacaactttaagaaattttgatgacttccctttttatggtagagcaatggat 17245981  T
Q  144 ttactattcttagaaggttca------ttaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| || || |||||||||      |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||    
T  17245982 ttactctttttggaaggttcatattcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtatttagatccttagctt 17246081  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  17246082 cctcaatagcagtcacctttg 17246102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 62 - 255
Target Start/End: Complemental strand, 10662973 - 10662770
Alignment:
Q  62 cagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttaga 157  Q
    |||||| ||||||| |||| |||||||||||||||| |||||    |||||| |||||||| ||||||||||| ||  |||| |||||| | ||||| ||    
T  10662973 cagaatctccatcatgtgactcttcttcagattcaataactttaagagctttagatgactttcctttagatgggagcgcaatagatttattcttctttga 10662874  T
Q  158 ag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtc 251  Q
    ||      | ||||| || || ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||     
T  10662873 agactcatgctcatttaggctcatttcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctccatagcagta 10662774  T
Q  252 acct 255  Q
    ||||    
T  10662773 acct 10662770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 62 - 255
Target Start/End: Complemental strand, 10877118 - 10876915
Alignment:
Q  62 cagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttaga 157  Q
    |||||| ||||||| |||| |||||||||||||||| |||||    |||||| |||||||| ||||||||||| ||  |||| |||||| | ||||| ||    
T  10877118 cagaatctccatcatgtgactcttcttcagattcaataactttaagagctttagatgactttcctttagatgggagcgcaatagatttattcttctttga 10877019  T
Q  158 ag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtc 251  Q
    ||      | ||||| || || ||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||     
T  10877018 agactcatgctcatttaggctcatttcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctccatagcagta 10876919  T
Q  252 acct 255  Q
    ||||    
T  10876918 acct 10876915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 18065102 - 18065318
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  18065102 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggcctttgaagattttgaagtctttcctttagatggtaaagcaat 18065201  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  18065202 ggatttactcttcttagaggattcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcctta 18065301  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  18065302 gcttcctcaatagcagt 18065318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 16315928 - 16316070
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  16315928 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgagggaactgacaagatctt 16316027  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  16316028 caacactcaaagtgtttaaatccttagcttcctcaatagcagt 16316070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 5021263 - 5021479
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  5021263 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 5021362  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  5021363 ggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcctta 5021462  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  5021463 gcttcctcaatagcagt 5021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 27665767 - 27665916
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  27665767 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 27665866  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27665867 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27665916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 4989523 - 4989307
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | |||             || |||||| | ||| ||||||||||||| | ||||    
T  4989523 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttataggctttagaagattttgaagtctttcctttagatggtaaagcaat 4989424  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| ||| |||    
T  4989423 ggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcctta 4989324  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||| ||||||||||    
T  4989323 gcttccccaatagcagt 4989307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 14837756 - 14837620
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||||| ||||||||||||| |||||||| |      | ||||| | ||| ||  |||  || ||||| || |||||||||||||||||||    
T  14837756 cctttagatggtagagcaatggatttactcttcttagaggactcatgctcatttaaactcatttcatgcaccttgagggaactgacaagatcttcaacac 14837657  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||| ||| |||| |||||||||||||||    
T  14837656 ttaaagtgtttagatccttagcttcctcaatagcagt 14837620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 24649538 - 24649674
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  24649538 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 24649637  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  24649638 ttaaagtatttagatccttagcttcctcaatagcagt 24649674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 459839 - 459906
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  459839 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 459906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 10742177 - 10742110
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  10742177 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10742110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 10955946 - 10955879
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  10955946 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10955879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 16265141 - 16265208
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  16265141 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16265208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 17927375 - 17927442
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  17927375 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 18131828 - 18131761
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  18131828 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 18131761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 18754069 - 18754002
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||| ||||||||||||||||||| ||| |||| |||||||||||||||    
T  18754069 actttgagtgagctaacaagatcctcaacacttaaagtgtttagatccttagcttcctcaatagcagt 18754002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 19945917 - 19945850
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  19945917 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 19945850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 22005693 - 22005760
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22005693 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22005760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 27175350 - 27175417
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27175350 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27175417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 30928072 - 30928005
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  30928072 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30928005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 36027567 - 36027634
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36027567 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36027634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 49516813 - 49516880
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  49516813 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 49516880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 55746900 - 55746764
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  55746900 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 55746801  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  55746800 ttaaagtatttagatccttagcttcctcaatggcagt 55746764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 15195501 - 15195437
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  15195501 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 15195437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 459690 - 459733
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  459690 gatcttcatcagaatctccatcaggtgattcttcttcagattca 459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 3380629 - 3380672
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3380629 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3380672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 10742326 - 10742283
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10742326 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10742283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 10956095 - 10956052
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10956095 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10956052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 14837836 - 14837793
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14837836 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14837793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 15198532 - 15198489
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15198532 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15198489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 16264992 - 16265035
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16264992 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16265035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 16315854 - 16315897
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16315854 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16315897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 17927226 - 17927269
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17927226 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17927269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 18131977 - 18131934
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18131977 gatcttcatcagaatctccatcaggtgattcttcttcagattca 18131934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 18754218 - 18754175
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18754218 gatcttcatcagaatctccatcaggtgattcttcttcagattca 18754175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 19946066 - 19946023
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  19946066 gatcttcatcagaatctccatcaggtgattcttcttcagattca 19946023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 22005544 - 22005587
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22005544 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22005587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 24649458 - 24649501
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24649458 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24649501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27175200 - 27175243
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27175200 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27175243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27665700 - 27665743
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27665700 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27665743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 27816525 - 27816458
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| | ||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27816525 actttgagtgagctaagaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27816458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 27816674 - 27816631
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27816674 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27816631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 30928221 - 30928178
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30928221 gatcttcatcagaatctccatcaggtgattcttcttcagattca 30928178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 36027418 - 36027461
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36027418 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36027461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 40455939 - 40455872
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| || || |||||||||||||||||||| ||||||| ||| |||| |||||||||||||||    
T  40455939 actttgagtgaactaacaagatcttcaacacttaacgtgtttagatccttagcttcctcaatagcagt 40455872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 40456088 - 40456045
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40456088 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40456045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 49516664 - 49516707
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  49516664 gatcttcatcagaatctccatcaggtgattcttcttcagattca 49516707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 55746980 - 55746937
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  55746980 gatcttcatcagaatctccatcaggtgattcttcttcagattca 55746937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 3380790 - 3380845
Alignment:
Q  195 ctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| || ||||||| ||| |||| |||||||||||||||    
T  3380790 ctgacaagatcttcaacactcaaggtgtttagatccttagcttcctcaatagcagt 3380845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 14712542 - 14712499
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  14712542 gatcttcatcagaatctccatctggtgattcttcttcagattca 14712499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 14712399 - 14712335
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||| |||||||||||||||||||||| | ||| |||| ||||||||| |||||    
T  14712399 ttgagggaactgacatgatcttcaacacttaaagtgttaagatccttagcttcctcaatggcagt 14712335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 19945999 - 19945949
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttaga 157  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| ||||||||    
T  19945999 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttaga 19945949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 133; Significance: 3e-69; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 13680653 - 13680873
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||  |||||||    
T  13680653 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagtaatggat 13680752  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||| | ||| ||||||      |||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  13680753 ttaatcttcctagaaggttcatgttcattaagacatatctcgtgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatatttagctt 13680852  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  13680853 cctcaatagcagtcacctttg 13680873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 48 - 254
Target Start/End: Original strand, 13878449 - 13878665
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  13878449 agtaggatcttcatcagaatctccatcaggtgattcttcttcaaattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatggat 13878548  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||||||      ||||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||||||||||||| ||    
T  13878549 ttactcttcttagaaggttcatgttcattaagacttatctcatgaactttgagagagatgacaagttcttcaacacttaatgtgtttaaatctttagctt 13878648  T
Q  238 cctcaatagcagtcacc 254  Q
    ||||||||| |||||||    
T  13878649 cctcaatagtagtcacc 13878665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 14171970 - 14172190
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||    | ||||||||||||||||||||||||||||| ||||||||    
T  14171970 agtaggatcttcatcagaatctccatcaggtgattcttcttcagactcaacaactttaagaacttttgatgacttccctttagatggtagagcaatggat 14172069  T
Q  144 ttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||||      | ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||    
T  14172070 ttactcttcttagacgattcatgttcattaagacttatctcatgaactttgagagagctgacaagatcctcaacacttaaagtgttaaaatctttagctt 14172169  T
Q  238 cctcaatagcagtcacctttg 258  Q
    ||||||||| |||||||||||    
T  14172170 cctcaatagtagtcacctttg 14172190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 53 - 257
Target Start/End: Complemental strand, 16547842 - 16547628
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  16547842 gatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggtagagcaatggatttact 16547743  T
Q  149 attcttagaaggtt------cattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     || || |||||||      |||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16547742 ctttttggaaggttcatgtccattaagacttagctcatgaactttaagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctca 16547643  T
Q  243 atagcagtcaccttt 257  Q
    |||||||||||||||    
T  16547642 atagcagtcaccttt 16547628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 53 - 257
Target Start/End: Original strand, 16617820 - 16618034
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||| ||||||||| |||||||||||||    
T  16617820 gatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggtagagcaatggatttact 16617919  T
Q  149 attcttagaaggtt------cattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     || || |||||||      |||||||||||| | ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16617920 ctttttggaaggttcatgtccattaagacttagctcatgaactttaagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctca 16618019  T
Q  243 atagcagtcaccttt 257  Q
    |||||||||||||||    
T  16618020 atagcagtcaccttt 16618034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 13174064 - 13173846
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    ||||||||||||||||||||||||| ||||| |||| ||     
T  13174064 agtaggatcttcatcagaatctccatcaggtgattcttcttcaaattcaacaactttaagagcttttgatgacttccctttagattgtagagcaatagag 13173965  T
Q  144 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| |||      |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13173964 ttactcttcttagcaggctcatgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 13173865  T
Q  238 cctcaatagcagtcacctt 256  Q
    |||||||| |||| |||||    
T  13173864 cctcaataacagtaacctt 13173846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 16311828 - 16311609
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||| |||| |||    
T  16311828 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgaattccctttagatggtagagcaatagat 16311729  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||    
T  16311728 ttactcttcttagtaggctcatgttcattaagacttatctcatgaactttgagagaattgac-agatcttcaacacttaaagtgtttaaatctttagctt 16311630  T
Q  238 cctcaatagcagtcacctttg 258  Q
    ||||||| ||||| |||||||    
T  16311629 cctcaatggcagtaacctttg 16311609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 64 - 256
Target Start/End: Complemental strand, 13028761 - 13028559
Alignment:
Q  64 gaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactattcttagaag 159  Q
    |||| ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||  |||| |||||||| ||| ||| ||    
T  13028761 gaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagtgcaatagatttactcttcctagcag 13028662  T
Q  160 g------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    |      |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||    
T  13028661 gctcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcgatagcagtaac 13028562  T
Q  254 ctt 256  Q
    |||    
T  13028561 ctt 13028559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 16669998 - 16669765
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| |||| |||    
T  16669998 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggcagagcaatagat 16669899  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataa---------------actttgagagagctgacaagatcttcaacacttaaagtgt 222  Q
    ||  | ||||||| ||      ||||||| ||||||||| |||||               || |||||||||||||||||||||||||||||||||||||    
T  16669898 ttgttcttcttagcaggctcatgttcatttagacttatctcataaaccttgagagagttgaccttgagagagctgacaagatcttcaacacttaaagtgt 16669799  T
Q  223 ttaaatctttagtttcctcaatagcagtcacctt 256  Q
    |||||||||||  |||||||||||| || |||||    
T  16669798 ttaaatctttaacttcctcaatagcggtaacctt 16669765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 17644366 - 17644133
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| |||| |||    
T  17644366 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggcagagcaatagat 17644267  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataa---------------actttgagagagctgacaagatcttcaacacttaaagtgt 222  Q
    ||  | ||||||| ||      ||||||| ||||||||| |||||               || |||||||||||||||||||||||||||||||||||||    
T  17644266 ttgttcttcttagcaggctcatgttcatttagacttatctcataaaccttgagagagttgaccttgagagagctgacaagatcttcaacacttaaagtgt 17644167  T
Q  223 ttaaatctttagtttcctcaatagcagtcacctt 256  Q
    |||||||||||  |||||||||||| || |||||    
T  17644166 ttaaatctttaacttcctcaatagcggtaacctt 17644133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 4413695 - 4413597
Alignment:
Q  160 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  4413695 gttcattgagactaatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 4413597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 21212288 - 21212214
Alignment:
Q  182 aactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  21212288 aactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcatcaatagcagtaacctt 21212214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 9168750 - 9168892
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  9168750 gactttcctttagatggtagatcaatagatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgagggaactgacaagatctt 9168849  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  9168850 caacactcaaagtgtttaaatccttagcttcctcaatagcagt 9168892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 6868971 - 6868822
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  6868971 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaaca 6868872  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  6868871 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 6868822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 13176291 - 13176082
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    | |    |||||| |||||||| ||||||||| ||||| |||| ||| ||||    
T  13176291 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtaagctttggatgactttcctttagattgtagagcaatagatctact 13176192  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || | |||||      | | ||| ||  ||| ||||||||| || ||||||||||||||||||||| ||||||||| ||| |||| |||||||    
T  13176191 cttctttgaggattcatgctcattcaaactcatttcatgaactttgagggaactgacaagatcttcaacactt-aagtgtttagatccttagcttcctca 13176093  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  13176092 atggcagtcac 13176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 11014363 - 11014499
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  11014363 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 11014462  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  11014463 ttaaagtatttagatccttagcttcctcaatagcagt 11014499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 176134 - 176201
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  176134 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 176201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 458645 - 458578
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  458645 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 458578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 1996800 - 1996867
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  1996800 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 1996867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 2707272 - 2707205
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  2707272 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 2707205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 4221252 - 4221319
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4221252 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4221319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 8626589 - 8626656
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  8626589 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 8626656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 9442507 - 9442574
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9442507 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9442574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 11003823 - 11003890
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  11003823 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11003890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 20988301 - 20988368
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  20988301 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 20988368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 22098385 - 22098452
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22098385 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22098452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 24743345 - 24743412
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24743345 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24743412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 26391753 - 26391686
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26391753 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26391686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 40043763 - 40043696
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  40043763 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40043696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 42875092 - 42875159
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  42875092 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 42875159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 15879563 - 15879414
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  15879563 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 15879464  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||| |||||| ||| |||| |||||||||||||||    
T  15879463 agatcttcaacacttaaaatgtttagatccttagcttcctcaatagcagt 15879414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 8003794 - 8003658
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  8003794 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 8003695  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  8003694 ttaaagtatttagatccttagcttcctcaatggcagt 8003658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 9093562 - 9093698
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  9093562 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 9093661  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  9093662 ttaaagtatttagatccttagcttcctcaatggcagt 9093698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 175985 - 176028
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  175985 gatcttcatcagaatctccatcaggtgattcttcttcagattca 176028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 458794 - 458751
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  458794 gatcttcatcagaatctccatcaggtgattcttcttcagattca 458751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 1996651 - 1996694
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  1996651 gatcttcatcagaatctccatcaggtgattcttcttcagattca 1996694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 2707421 - 2707378
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  2707421 gatcttcatcagaatctccatcaggtgattcttcttcagattca 2707378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 4221103 - 4221146
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4221103 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4221146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 6869038 - 6868995
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6869038 gatcttcatcagaatctccatcaggtgattcttcttcagattca 6868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 8003874 - 8003831
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8003874 gatcttcatcagaatctccatcaggtgattcttcttcagattca 8003831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 8626440 - 8626483
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  8626440 gatcttcatcagaatctccatcaggtgattcttcttcagattca 8626483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 9093482 - 9093525
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9093482 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9093525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 9168676 - 9168719
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9168676 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9168719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 9442358 - 9442401
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9442358 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9442401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 11003674 - 11003717
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11003674 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11003717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 11014283 - 11014326
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11014283 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11014326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 15879630 - 15879587
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15879630 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15879587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 17951773 - 17951706
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| || ||||||||||||    
T  17951773 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagctttctcaatagcagt 17951706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 17951922 - 17951879
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17951922 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17951879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 18439699 - 18439906
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||| ||||| |||||| |||||||||||||||||||||  | | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  18439699 gatcttcattagaatctccatctggtgattcttcttcagattcactagccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 18439798  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||| ||||||||||||||| |||||||||| ||| |||| |||||||    
T  18439799 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgataagatcttcaacactcaaagtgtttagatccttagcttcctca 18439898  T
Q  243 atagcagt 250  Q
    || |||||    
T  18439899 atggcagt 18439906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 20988152 - 20988195
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20988152 gatcttcatcagaatctccatcaggtgattcttcttcagattca 20988195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 22098236 - 22098279
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22098236 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22098279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 24743196 - 24743239
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24743196 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24743239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 26391902 - 26391859
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26391902 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 26654995 - 26654928
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  26654995 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 26654928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 26655144 - 26655101
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26655144 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26655101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 40043912 - 40043869
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40043912 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 42874943 - 42874986
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  42874943 gatcttcatcagaatctccatcaggtgattcttcttcagattca 42874986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 256
Target Start/End: Complemental strand, 16106706 - 16106650
Alignment:
Q  200 aagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    ||||||||||||||||| |||||||||||| |||| ||||||||| ||| |||||||    
T  16106706 aagatcttcaacacttagagtgtttaaatcattagcttcctcaattgcattcacctt 16106650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 4413826 - 4413779
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattc 95  Q
    |||||||||||||||||||| ||||||| || ||||||||||||||||    
T  4413826 agtaggatcttcatcagaatctccatcaagtaattcttcttcagattc 4413779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 250
Target Start/End: Complemental strand, 16309426 - 16309336
Alignment:
Q  160 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| ||||  ||| ||| ||| ||||||||||| | |||||| |||||| ||| ||| |||||||| |||| |||||||||||||||    
T  16309426 gttcatttagaccaatctcatgaaccttgagagagcttataagatcctcaacagttagagtttttaaatccttagcttcctcaatagcagt 16309336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 8e-67; HSPs: 60)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 26940711 - 26940919
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  26940711 agtagggtcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaattgat 26940810  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| ||      ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  26940811 ttactcttcttagtaggctcctgttcattaagacttatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagctt 26940910  T
Q  238 cctcaatag 246  Q
    |||||||||    
T  26940911 cctcaatag 26940919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 19450385 - 19450596
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||| |||| |||||||||||||| ||||||||||| |||   |||   ||||||||||||||  |||||||||||||| |||| ||||||||    
T  19450385 ggatcttcatctgaatctccatcaggtgattgttcttcagatttaact--ttaagagcttttgatgacttttctttagatggtagagcaatagatttact 19450482  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     || |||| ||||||||      | ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  19450483 cttattagcaggttcatgttcatttagacttatctcatgaactttgagagggctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctga 19450582  T
Q  243 atagcagtcacctt 256  Q
    |||||||| |||||    
T  19450583 atagcagtaacctt 19450596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 52 - 256
Target Start/End: Original strand, 19448391 - 19448602
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||| |||| |||||||||||||| ||||||||||| |||   |||   ||||||||||||||  |||||||||||||| |||| ||||||||    
T  19448391 ggatcttcatctgaatctccatcaggtgattgttcttcagatttaact--ttaagagcttttgatgacttttctttagatggtagagcaatagatttact 19448488  T
Q  149 attcttag-aag-----gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     || |||| |||     ||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  19448489 cttattagcaagttcatgttcatttagacttatctcatgaactttgagagggctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctga 19448588  T
Q  243 atagcagtcacctt 256  Q
    |||||||| |||||    
T  19448589 atagcagtaacctt 19448602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 17926093 - 17926301
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||| ||||||||| |||||| |||||    ||||||  |||||||  ||||||||   | | |||| |||    
T  17926093 agtaggatcttcatcagaatctccatcaggtgactcttcttcatattcaataactttaagagctttatatgactttactttagatttcatagcaatagat 17926192  T
Q  144 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||| | ||||| |||| |||||      | ||||| ||  ||| ||||||||||||||| |||||||||| ||||||||||||||||| |||||| | ||    
T  17926193 ttattcttctttgaagattcatgctcatttagactcatttcatgaactttgagagagctaacaagatctttaacacttaaagtgtttacatctttcgctt 17926292  T
Q  238 cctcaatag 246  Q
     ||||||||    
T  17926293 tctcaatag 17926301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 53 - 258
Target Start/End: Complemental strand, 14055119 - 14054904
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaac-tta---gcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    |||||||||||||||  ||||| |||||||||||||||||||||  | | |||   ||||| |||| ||| ||||||||||||||| |||||||||||||    
T  14055119 gatcttcatcagaatccccatctggtgattcttcttcagattcactagccttatatgctttagatggctttcctttagatggtagagcaatggatttact 14055020  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || | |||||      | || || |   ||| ||| |||||||| || ||||||||||||||||| || ||||||| ||| |||| |||||||    
T  14055019 cttctttgaggattcatgctcatttaggctcaattcatgaaccttgagagaacttacaagatcttcaacactcaacgtgtttagatccttagcttcctca 14054920  T
Q  243 atagcagtcacctttg 258  Q
    |||||||| |||||||    
T  14054919 atagcagttacctttg 14054904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 27502838 - 27502987
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  27502838 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaaca 27502937  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  27502938 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 27502987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 28253235 - 28253086
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  28253235 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaaca 28253136  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  28253135 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 28253086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 28331984 - 28331835
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  28331984 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgagctaaca 28331885  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  28331884 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 28331835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 27383204 - 27383420
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatga---------cttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | ||| |    ||||||| ||         ||| ||||||||||||| | ||||    
T  27383204 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggcttttgaggattttgaagtctttcctttagatggtaaagcaat 27383303  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| |||  ||    
T  27383304 ggatttactcttcttagaggattcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcccta 27383403  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  27383404 gcttcctcaatagcagt 27383420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 27473588 - 27473804
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatga---------cttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  | ||| |    ||||||| ||         ||| ||||||||||||| | ||||    
T  27473588 gatcttcatcagaatctccatcaggtgattcttcttcagattcactagctttgtaggcttttgaggattttgaagtctttcctttagatggtaaagcaat 27473687  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||||||||||||||||||||||||||| |||  ||    
T  27473688 ggatttactcttcttagaggattcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtgtttagatcccta 27473787  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  27473788 gcttcctcaatagcagt 27473804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 9114078 - 9114011
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  9114078 actttgagtgagctaacaagatcttcaacacttaaagtatttagatctttagcttcctcaatagcagt 9114011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 248
Target Start/End: Original strand, 25804209 - 25804349
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||||||||  ||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  25804209 gactttcctttagatggtagaacaataaatttactcttcttagaggactcatgctcattcagactcatttcatgcactttgagggaactgacaagatctt 25804308  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagca 248  Q
    ||||||| |||||||||| ||| |||| |||||||||||||    
T  25804309 caacactcaaagtgtttagatccttagcttcctcaatagca 25804349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 185 - 250
Target Start/End: Original strand, 26042813 - 26042878
Alignment:
Q  185 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  26042813 tttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 26042878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 250
Target Start/End: Complemental strand, 17447360 - 17447272
Alignment:
Q  162 tcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||| ||| ||||||  |||||||| || | ||||||||||||||||| | |||||||||| |||| |||||||||||||||    
T  17447360 tcattaagactaatctcataaatcttgagagaactcataagatcttcaacacttagaatgtttaaatccttagcttcctcaatagcagt 17447272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 3670660 - 3670727
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  3670660 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3670727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 12718421 - 12718354
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  12718421 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12718354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 22307269 - 22307476
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  22307269 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttataagctttggaagactttcctttagatggtagagcaatagatctatt 22307368  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  22307369 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 22307468  T
Q  243 atagcagt 250  Q
    || |||||    
T  22307469 atggcagt 22307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 25984693 - 25984760
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  25984693 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 25984760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 26034636 - 26034703
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26034636 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26034703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 26874018 - 26874085
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  26874018 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 26874085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 27350961 - 27351028
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27350961 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27351028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 27411701 - 27411768
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27411701 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27411768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 32302631 - 32302564
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  32302631 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 32963531 - 32963464
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  32963531 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 32963464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 34808747 - 34808680
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34808747 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttaggttcctcaatagcagt 34808680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 246
Target Start/End: Complemental strand, 20031588 - 20031443
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  20031588 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctaatttaaactcatttcatgcactttgagtgaactaaca 20031489  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatag 246  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||    
T  20031488 agatcttcaacacttaaagtgtttagatccttagcttcctcaatag 20031443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 18553908 - 18553972
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||    
T  18553908 ttgagagaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 18553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 3670511 - 3670554
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3670511 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3670554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 12863998 - 12864041
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12863998 gatcttcatcagaatctccatcaggtgattcttcttcagattca 12864041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 12864147 - 12864214
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||| ||||||||| |||| ||| |||| |||||||||||||||    
T  12864147 actttgagtgagctaacaagatcttcaaaacttaaagtatttagatccttagcttcctcaatagcagt 12864214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 165 - 248
Target Start/End: Complemental strand, 13138088 - 13138005
Alignment:
Q  165 ttaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagca 248  Q
    |||||||| ||| ||| ||| |||||||| || | ||||||||||||| ||| ||||||||||||||||| ||| |||||||||    
T  13138088 ttaagactaatctcatgaaccttgagagaacttataagatcttcaacaattagagtgtttaaatctttagattcttcaatagca 13138005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 16958075 - 16958118
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  16958075 gatcttcatcagaatctccatcaggtgattcttcttcagattca 16958118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 17610319 - 17610112
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  17610319 gatcttcatcagaatctccatctggtgactcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 17610220  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  17610219 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 17610120  T
Q  243 atagcagt 250  Q
    || |||||    
T  17610119 atggcagt 17610112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 20031655 - 20031612
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  20031655 gatcttcatcagaatctccatcaggtgattcttcttcagattca 20031612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 25984544 - 25984587
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  25984544 gatcttcatcagaatctccatcaggtgattcttcttcagattca 25984587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 26034487 - 26034530
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26034487 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26034530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 26042662 - 26042705
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26042662 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26042705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 26873869 - 26873912
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26873869 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26873912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27350812 - 27350855
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27350812 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27350855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27411552 - 27411595
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27411552 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27411595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 28253302 - 28253259
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28253302 gatcttcatcagaatctccatcaggtgattcttcttcagattca 28253259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 28332051 - 28332008
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28332051 gatcttcatcagaatctccatcaggtgattcttcttcagattca 28332008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 32302780 - 32302737
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  32302780 gatcttcatcagaatctccatcaggtgattcttcttcagattca 32302737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 32963680 - 32963637
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  32963680 gatcttcatcagaatctccatcaggtgattcttcttcagattca 32963637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 34808896 - 34808853
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34808896 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34808853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 16958225 - 16958291
Alignment:
Q  184 ctttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| ||||||||| |||||    
T  16958225 ctttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatggcagt 16958291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 22385237 - 22385294
Alignment:
Q  196 tgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||    
T  22385237 tgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcac 22385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 253
Target Start/End: Original strand, 11204583 - 11204650
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    ||||| || |||||||||||||||||||| |||||||| | ||| |||| ||||||||| ||||||||    
T  11204583 ttgagggaactgacaagatcttcaacactcaaagtgttcagatccttagcttcctcaatggcagtcac 11204650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 12718570 - 12718531
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcaga 92  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12718570 gatcttcatcagaatctccatcaggtgattcttcttcaga 12718531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 17056529 - 17056572
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  17056529 gatcttcatcagaatctccatctggtgattcttcttcagattca 17056572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 25723461 - 25723418
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  25723461 gatcttcatcagaatctccatctggtgattcttcttcagattca 25723418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27502771 - 27502814
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  27502771 gatcttcatcagaatctcgatcaggtgattcttcttcagattca 27502814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 18553768 - 18553808
Alignment:
Q  55 tcttcatcagaatttccatcaggtgattcttcttcagattc 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  18553768 tcttcatcagaatctccatctggtgattcttcttcagattc 18553808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 9114227 - 9114184
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||    
T  9114227 gatcttcatcagaatctccatcagatgattcttcttaagattca 9114184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 11204439 - 11204482
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| ||||||||||||||| |||||    
T  11204439 gatcttcatcagaatctccatctggtgattcttcttcatattca 11204482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 22385084 - 22385127
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  22385084 gatcttcatcagaatctccgtctggtgattcttcttcagattca 22385127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 25804135 - 25804178
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||||||| |||||| |||||||| |||||||||||||||||||    
T  25804135 gatcttcaacagaatctccatcagttgattcttcttcagattca 25804178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 19874216 - 19874258
Alignment:
Q  50 taggatcttcatcagaatttccatcaggtgattcttcttcaga 92  Q
    |||||||||||||||||| ||||||| |||| |||||||||||    
T  19874216 taggatcttcatcagaatctccatcaagtgactcttcttcaga 19874258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 92
Target Start/End: Complemental strand, 17447477 - 17447440
Alignment:
Q  55 tcttcatcagaatttccatcaggtgattcttcttcaga 92  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  17447477 tcttcatcagaatctccatcaggtgactcttcttcaga 17447440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 17062840 - 17062904
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||  || ||||||| ||| |||| ||||||||| |||||    
T  17062840 ttgagggaactgacaagatcttcaacacacaaggtgtttagatccttagcttcctcaatggcagt 17062904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 8e-67; HSPs: 93)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 26782732 - 26782952
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| ||||||||    
T  26782732 agtatgatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagcaatggat 26782831  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| ||      |||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  26782832 ttactcttcttagcaggctccagttcattaagacttgtcttatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagctt 26782931  T
Q  238 cctcaatagcagtcacctttg 258  Q
    ||  |||| ||||||||||||    
T  26782932 ccaaaataacagtcacctttg 26782952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 26763769 - 26763988
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||    ||||||||||||||||||||| ||||| ||| ||||| ||    
T  26763769 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaactttaagagcttttgatgacttcccttttgatggaagagcaatgaat 26763868  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    | ||| ||||||||||      ||||||||||||||||| ||| ||||||||||||| |||||||||| | |||||||||||||||||||||||||| ||    
T  26763869 t-acttttcttagaagattcatgttcattaagacttatctcatgaactttgagagagttgacaagatccttaacacttaaagtgtttaaatctttagctt 26763967  T
Q  238 cctcaatagcagtcacctttg 258  Q
    ||||||||||| |||||||||    
T  26763968 cctcaatagcaatcacctttg 26763988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 21200845 - 21200627
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||| ||||||| | ||| |||||||||||||||||||||||||||||||||||    |||||||||||| |||||||||||||||||| |||| |||    
T  21200845 agtagggtcttcattataatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgaattccctttagatggtagagcaattgat 21200746  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||||||      ||||||| ||||||||| ||| |||||| |||||| |||||||||||| ||||||||||||||||| || ||||| ||    
T  21200745 ttactcttcttagaaggctcatgttcatttagacttatctcatgaactttaagagagttgacaagatctttaacacttaaagtgtttagatgtttagctt 21200646  T
Q  238 cctcaatagcagtcacctt 256  Q
    ||||||||||||| |||||    
T  21200645 cctcaatagcagtaacctt 21200627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 23394189 - 23394040
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgaca 200  Q
    |||||| ||||| ||||||||||||||| ||||||||||||| |||||||| |      | ||||| | ||| ||  |||  |||||||| || ||||||    
T  23394189 ttttgaagactttcctttagatggtagagcaatggatttactcttcttagaggactcatgctcatttaaactcatttcatgcactttgagggaactgaca 23394090  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  23394089 agatcttcaacacttaaagtgtttaaatccttagcttcctcaatagcagt 23394040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 253
Target Start/End: Original strand, 23486917 - 23487127
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||  | | |    |||||| |||||||| ||||||||||||||| |||| ||| || |    
T  23486917 gatcttcatcagaatctccatctggtgattcttcttcagattcactagccttgtaagctttagatgactttcctttagatggtagagcaatagatctatt 23487016  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || | |||||      | ||||  ||  ||| ||||||||  || ||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  23487017 cttctttgaggattcatgctcattcagacccatttcatgaactttgatggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctca 23487116  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  23487117 atggcagtcac 23487127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 24981898 - 24982040
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  |||||||| || |||||||||||||    
T  24981898 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgagggaactgacaagatctt 24981997  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||||||||||||| |||| |||||||||||||||    
T  24981998 caacactcaaagtgtttaaatccttagcttcctcaatagcagt 24982040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 256
Target Start/End: Complemental strand, 11209833 - 11209620
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaa-ctta---gcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||| ||||||||  |  |||    ||||| |||| ||| |||||| |||||||| |||| ||||||||    
T  11209833 gatcttcatcagaatctccatctggtgattcttctacagattcactagtcttgtatgctttagatggctttcctttatatggtagagcaatagatttact 11209734  T
Q  149 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || |      | ||||| || || ||  ||| ||| |||||||| |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  11209733 cttctttgaggacttatgctcatttaggctcatttcatgaaccttgagagaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 11209634  T
Q  243 atagcagtcacctt 256  Q
    || |||||||||||    
T  11209633 atggcagtcacctt 11209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 31420363 - 31420296
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  31420363 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 31420296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 250
Target Start/End: Complemental strand, 34053733 - 34053591
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  ||||||||||| |||||||||||||    
T  34053733 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgcactttgagagaactgacaagatctt 34053634  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| || ||||||| ||| |||| |||||||||||||||    
T  34053633 caacactcaaggtgtttagatccttagcttcctcaatagcagt 34053591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 39354276 - 39354127
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| |||    
T  39354276 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaaca 39354177  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39354176 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39354127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 5299705 - 5299772
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5299705 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5299772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 6977504 - 6977437
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  6977504 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 6977437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 9337652 - 9337585
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9337652 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9337585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 14031740 - 14031673
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14031740 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14031673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 14456175 - 14456242
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14456175 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14456242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 14567216 - 14567283
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  14567216 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 14567283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 15741667 - 15741600
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  15741667 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 15741600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 16002459 - 16002526
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  16002459 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 16002526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 17608760 - 17608693
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  17608760 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17608693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 17720616 - 17720549
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  17720616 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 17720549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 22148214 - 22148147
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22148214 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22148147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 22677814 - 22677747
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22677814 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22677747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 23297975 - 23297908
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23297975 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23297908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 23363794 - 23363727
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23363794 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23363727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 23698478 - 23698411
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  23698478 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 23698411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 24568786 - 24568719
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24568786 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 27051400 - 27051467
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27051400 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27051467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 27461860 - 27461793
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  27461860 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 27461793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 30236589 - 30236656
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  30236589 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 30236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 31350232 - 31350165
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  31350232 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 31350165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 31835178 - 31835111
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  31835178 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 31835111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 34773607 - 34773540
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34773607 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 34773540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 35217201 - 35217134
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  35217201 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35217134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 36591680 - 36591747
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36591680 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36591747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 36689396 - 36689329
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36689396 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36689329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 39500050 - 39500117
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39500050 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39500117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 40392056 - 40391989
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  40392056 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40391989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 42044478 - 42044411
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  42044478 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 42044411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 37739061 - 37739197
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  37739061 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 37739160  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  37739161 ttaaagtatttagatccttagcttcctcaatggcagt 37739197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 186 - 250
Target Start/End: Original strand, 17455879 - 17455943
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  17455879 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 17455943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 1120316 - 1120359
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  1120316 gatcttcatcagaatctccatcaggtgattcttcttcagattca 1120359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 1120465 - 1120532
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| | | |||| |||||||||||||||    
T  1120465 actttgagtgagctaacaagatcttcaacacttaaagtatttagacccttagcttcctcaatagcagt 1120532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 5299556 - 5299599
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5299556 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5299599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 6977653 - 6977610
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  6977653 gatcttcatcagaatctccatcaggtgattcttcttcagattca 6977610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 9337801 - 9337758
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9337801 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9337758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 14031889 - 14031846
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14031889 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14031846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 14456026 - 14456069
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14456026 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14456069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 14567067 - 14567110
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  14567067 gatcttcatcagaatctccatcaggtgattcttcttcagattca 14567110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 15741816 - 15741773
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  15741816 gatcttcatcagaatctccatcaggtgattcttcttcagattca 15741773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 17455727 - 17455770
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17455727 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17455770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 17608909 - 17608866
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17608909 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17608866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 17720765 - 17720722
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  17720765 gatcttcatcagaatctccatcaggtgattcttcttcagattca 17720722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 21704378 - 21704421
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21704378 gatcttcatcagaatctccatcaggtgattcttcttcagattca 21704421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 22148363 - 22148320
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22148363 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 22677963 - 22677920
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  22677963 gatcttcatcagaatctccatcaggtgattcttcttcagattca 22677920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 23298124 - 23298081
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23298124 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23298081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 23363943 - 23363900
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23363943 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23363900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 23394256 - 23394213
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23394256 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23394213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 23698627 - 23698584
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  23698627 gatcttcatcagaatctccatcaggtgattcttcttcagattca 23698584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 24568935 - 24568892
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24568935 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24568892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 24809763 - 24809720
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24809763 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24809720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 24825889 - 24825932
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24825889 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24825932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 24826038 - 24826105
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||  ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  24826038 actttgagtgagcgaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 24826105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 24981824 - 24981867
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  24981824 gatcttcatcagaatctccatcaggtgattcttcttcagattca 24981867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27051251 - 27051294
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27051251 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27051294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 27462009 - 27461966
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27462009 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27461966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27621186 - 27621229
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27621186 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27621229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 27621335 - 27621402
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||    
T  27621335 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 27621402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 30236440 - 30236483
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  30236440 gatcttcatcagaatctccatcaggtgattcttcttcagattca 30236483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 31350381 - 31350338
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31350381 gatcttcatcagaatctccatcaggtgattcttcttcagattca 31350338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 31420512 - 31420469
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31420512 gatcttcatcagaatctccatcaggtgattcttcttcagattca 31420469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 31835327 - 31835284
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  31835327 gatcttcatcagaatctccatcaggtgattcttcttcagattca 31835284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 34053807 - 34053764
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34053807 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 34773756 - 34773713
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34773756 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34773713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 35217350 - 35217307
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35217350 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35217307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 36689545 - 36689502
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36689545 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36689502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 37738981 - 37739024
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37738981 gatcttcatcagaatctccatcaggtgattcttcttcagattca 37739024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 39499901 - 39499944
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39499901 gatcttcatcagaatctccatcaggtgattcttcttcagattca 39499944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 40392205 - 40392162
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40392205 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40392162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 42044627 - 42044584
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  42044627 gatcttcatcagaatctccatcaggtgattcttcttcagattca 42044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 43620308 - 43620351
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  43620308 gatcttcatcagaatctccatcaggtgattcttcttcagattca 43620351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 43620375 - 43620524
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  43620375 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 43620474  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
     |||||||||||||||||||||||| ||| |||| |||||| ||||||||    
T  43620475 ggatcttcaacacttaaagtgtttagatccttagcttcctcgatagcagt 43620524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 19465739 - 19465603
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || || ||||||||||||||||    
T  19465739 cctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgcaccttgagggaactaacaagatcttcaacac 19465640  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||| ||| |||| ||||||||| |||||    
T  19465639 ttaaagtgtttagatccttagcttcctcaatggcagt 19465603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 21704452 - 21704588
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || |||||||||||||    
T  21704452 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggaactgacaagatctt 21704551  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaat 244  Q
    ||||||| |||||||||| ||| |||| |||||||||    
T  21704552 caacactcaaagtgtttagatccttagcttcctcaat 21704588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 24809683 - 24809547
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  ||||| || ||||| ||||||||||||||||    
T  24809683 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttaagtgagctaacaagatcttcaacac 24809584  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| ||||||||| |||||    
T  24809583 ttaaagtatttagatccttagcttcctcaatggcagt 24809547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 20553498 - 20553446
Alignment:
Q  198 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||||||||||||    
T  20553498 acaagatcttcaacactcaaagtgtttagatccttagcttcctcaatagcagt 20553446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 13532291 - 13532334
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  13532291 gatcttcatcagaatctccatctggtgattcttcttcagattca 13532334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 16002310 - 16002353
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  16002310 gatctttatcagaatctccatcaggtgattcttcttcagattca 16002353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 19465819 - 19465776
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||||||||| |||||||||||||||    
T  19465819 gatcttcatcagaatctccatcaggtgactcttcttcagattca 19465776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 20553662 - 20553619
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  20553662 gatcttcatcggaatctccatcaggtgattcttcttcagattca 20553619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 36591531 - 36591574
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  36591531 gatcttcatcaaaatctccatcaggtgattcttcttcagattca 36591574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 39354343 - 39354300
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  39354343 gatcttcatcaaaatctccatcaggtgattcttcttcagattca 39354300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 13532434 - 13532492
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 244  Q
    ||||| || ||||||||||| |||||||| |||||||||| ||| |||| |||||||||    
T  13532434 ttgagggaactgacaagatcctcaacactcaaagtgtttagatccttagcttcctcaat 13532492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 121; Significance: 5e-62; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 35743 - 35963
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    |||||||||||||||||||||| |||||||| ||||||||    
T  35743 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttatatggtagagcaatggat 35842  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| |||  |||||      ||||||||||||||||| ||| |||| |||||||| |||  |||||||||| ||||||||||||||||||||||| ||    
T  35843 ttactcttccaagaaggttcatgttcattaagacttatctcatgaactctgagagagttgagtagatcttcaaaacttaaagtgtttaaatctttagctt 35942  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  35943 cctcaatagcagtcacctttg 35963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 133803 - 134023
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    |||||||||||||||||||||| |||||||| ||||||||    
T  133803 agtaggatcttcatcagaatctccatcaagtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttatatggtagagcaatggat 133902  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| |||  |||||      ||||||||||||||||| ||| |||| |||||||| |||  |||||||||| ||||||||||||||||||||||| ||    
T  133903 ttactcttccaagaaggttcatgttcattaagacttatctcatgaactctgagagagttgagtagatcttcaaaacttaaagtgtttaaatctttagctt 134002  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  134003 cctcaatagcagtcacctttg 134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 51 - 256
Target Start/End: Original strand, 157451 - 157663
Alignment:
Q  51 aggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    |||| ||||||| |||| ||||||||||||||||||||||||||||||   |||   | |||||||||||||||||||||||||||| |||| |||||||    
T  157451 aggaccttcatctgaatctccatcaggtgattcttcttcagattcaact--ttaaaagtttttgatgacttccctttagatggtagagcaattgatttac 157548  T
Q  148 tattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | ||||||| |||      |||||| ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  157549 tcttcttagcaggctcatgttcatttagatttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctc 157648  T
Q  242 aatagcagtcacctt 256  Q
    ||||||||| |||||    
T  157649 aatagcagtaacctt 157663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 45373 - 45306
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  45373 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 45306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Complemental strand, 45557 - 45518
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcaga 92  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  45557 gatcttcatcagaatctccatcaggtgattcttcttcaga 45518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 48 - 244
Target Start/End: Original strand, 2546 - 2752
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||  |||||||    
T  2546 agtaggatcttcatcagaatatccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggtagagtaatggat 2645  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||| | ||| ||||||      |||||||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  2646 ttaatcttcctagaaggttcatgttcattaagacatatctcgtgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatatttagctt 2745  T
Q  238 cctcaat 244  Q
    |||||||    
T  2746 cctcaat 2752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 113; Significance: 3e-57; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 22253908 - 22254128
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    |||||||||||||||| ||||||||||||||  ||| |||    
T  22253908 agtaggatcttcatcagaatctccatcaggtgattcttcttcctattcaacaactttaagagcttttgatgacttctctttagatggtagagtaatagat 22254007  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| || |||| ||      ||||||||||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||||||| | ||    
T  22254008 ttactctttttagtagactcatgttcattaagacttatctcatgaactttgagagagctaacaagatcatcaacacttaaagtgtttaaatctttggctt 22254107  T
Q  238 cctcaatagcagtcacctttg 258  Q
    || ||||||||||||||||||    
T  22254108 ccccaatagcagtcacctttg 22254128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 28703012 - 28702792
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||| ||||||| |||||||| | ||||||||||| | | |||| |||    ||||||||||||||||||||| ||||||||| ||||| ||    
T  28703012 agtaggatcttcgtcagaatctccatcagataattcttcttcatacttaacagctttaagagcttttgatgacttcccttttgatggtagagcaatgaat 28702913  T
Q  144 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| || |||||||||||||      |||| |||||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||    
T  28702912 ttactctttttagaaggttcatgctcattaaggcttatctcatgaactttgagagagttgacaagatcttcaacactcaaagtgtttaaatctttaactt 28702813  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  28702812 cctcaatagcagtcacctttg 28702792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 24723683 - 24723897
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||| | ||| |||| |||    
T  24723683 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcactttagatagaagagcaatagat 24723782  T
Q  144 ttactattcttag-aag-----gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| |||     ||||||| ||||||||| |    ||||| ||| || ||||||||||||||||||||||||||||||||||||||| ||    
T  24723783 ttactcttcttagcaagctcatgttcatttagacttatctc----actttaagaaagttgacaagatcttcaacacttaaagtgtttaaatctttagctt 24723878  T
Q  238 cctcaatagcagtcacctt 256  Q
     |||||||||||| |||||    
T  24723879 actcaatagcagtaacctt 24723897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 52 - 256
Target Start/End: Complemental strand, 22783413 - 22783199
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    |||||||||||| |||  ||||| |||||||||||||||||||| || || |    ||||||||||||||| ||| |  |||||||  |||||||||| |    
T  22783413 ggatcttcatcaaaatccccatcgggtgattcttcttcagattccacgaccttcaaagcttttgatgactttcctcttaatggtagggcaatggatttgc 22783314  T
Q  148 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | ||||| ||||      ||||||| |||||||||  || |||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  22783313 ttttcttggaagattcatgttcattgagacttatcttatgaactttgagagagctgacaagatcttcaacacttaaagtgcttaaatctttagcttcctc 22783214  T
Q  242 aatagcagtcacctt 256  Q
    |||||||||||||||    
T  22783213 aatagcagtcacctt 22783199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 21137531 - 21137629
Alignment:
Q  160 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||||||| ||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21137531 gttcattaaaacttatctcatgtacttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 21137629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 23185982 - 23185816
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaac---aacttagcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||   ||   ||||||||| ||||||||||  ||||||||| |||| ||||    
T  23185982 agtaggatcttcatctgaatctccatcaggtgaatcttcttcagattcaactttaa--gagcttttgaagacttcccttaggatggtagagcaattgatt 23185885  T
Q  145 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    |||| ||| ||| ||      ||||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  23185884 tactcttcctagcaggttcatgttcatttagacttatctcatgaactttgagagagctgacaatatctt 23185816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 48 - 207
Target Start/End: Complemental strand, 23597245 - 23597079
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaac---aacttagcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||||||   ||   ||||||||| ||||||||||  ||||||||| |||| ||||    
T  23597245 agtaggatcttcatctgaatctccatcaggtgaatcttcttcagattcaactttaa--gagcttttgaagacttcccttaggatggtagagcaattgatt 23597148  T
Q  145 tactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    |||| ||| ||| ||      ||||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  23597147 tactcttcctagcaggttcatgttcatttagacttatctcatgaactttgagagagctgacaatatctt 23597079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 21163542 - 21163475
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  21163542 actttgagtgagctgacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 21163475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 24574502 - 24574557
Alignment:
Q  203 atcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24574502 atcttgaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 24574557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 10900165 - 10900079
Alignment:
Q  162 tcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagca 248  Q
    ||||| ||||| ||| ||| ||| |||| |||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10900165 tcattgagactgatctcatgaaccttgaaagagctcataagatcttcaacacttaaagtgtttaaatctctagtttcctcaatagca 10900079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 24416703 - 24416554
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgaca 200  Q
    |||||| ||||| ||||||||||||||| ||||||||||||| ||||||||||      | ||||| | ||| ||  |||  || ||||  || ||||||    
T  24416703 ttttgaagactttcctttagatggtagagcaatggatttactcttcttagaagactcatgctcatttaaactcatttcatgcaccttgaaggaactgaca 24416604  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  24416603 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 24416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 24842658 - 24842716
Alignment:
Q  198 acaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  24842658 acaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtaacctt 24842716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 24329493 - 24329277
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt-------------agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |  |||             || |||||| | ||| ||||||||||||||| ||||    
T  24329493 gatcttcatcagaatctccatcaggtgattcttcttcagattcaccggctttgtaggctttggaagattttgaagtctttcctttagatggtagagcaat 24329394  T
Q  140 ggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
    ||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||    
T  24329393 ggatttactcttcttagaggtttcatgctcatttaaactcatttcatgcactttgagtgagctaacaagatcttcaacacttaaagtatttagatcctta 24329294  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  24329293 gcttcctcaatagcagt 24329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 27230587 - 27230723
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  27230587 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 27230686  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  27230687 ttaaagtatttagatccttagcttcctcaatagcagt 27230723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 35262152 - 35262288
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  35262152 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 35262251  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  35262252 ttaaagtatttagatccttagcttcctcaatagcagt 35262288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Original strand, 35272777 - 35272913
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| ||||||||||||||||    
T  35272777 cctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaacaagatcttcaacac 35272876  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||| |||| ||| |||| |||||||||||||||    
T  35272877 ttaaagtatttagatccttagcttcctcaatagcagt 35272913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 4219113 - 4219180
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4219113 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4219180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 9899168 - 9899101
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9899168 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9899101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 10276204 - 10276271
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  10276204 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 10276271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 11396767 - 11396700
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  11396767 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 11396700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 22916455 - 22916388
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  22916455 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 22916388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 34791812 - 34791745
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  34791812 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 34791745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 39171689 - 39171622
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  39171689 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 39171622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 40249826 - 40249893
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  40249826 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 40249893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 4218964 - 4219007
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4218964 gatcttcatcagaatctccatcaggtgattcttcttcagattca 4219007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 9764358 - 9764291
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||| | ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  9764358 actttgcgtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 9764291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 9764507 - 9764464
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9764507 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9764464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 9899317 - 9899274
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9899317 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9899274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 10276055 - 10276098
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  10276055 gatcttcatcagaatctccatcaggtgattcttcttcagattca 10276098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 11396916 - 11396873
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  11396916 gatcttcatcagaatctccatcaggtgattcttcttcagattca 11396873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 21163691 - 21163648
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21163691 gatcttcatcagaatctccatcaggtgattcttcttcagattca 21163648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 26876036 - 26876079
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  26876036 gatcttcatcagaatctccatcaggtgattcttcttcagattca 26876079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 26876110 - 26876252
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || |||||||||||||    
T  26876110 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggaactgacaagatctt 26876209  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||| ||| |||| |||||| || |||||    
T  26876210 caacacttaaagtgtttagatccttagcttcctctatggcagt 26876252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 27230507 - 27230550
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  27230507 gatcttcatcagaatctccatcaggtgattcttcttcagattca 27230550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 28723062 - 28723019
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  28723062 gatcttcatcagaatctccatcaggtgattcttcttcagattca 28723019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 29253288 - 29253331
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  29253288 gatcttcatcagaatctccatcaggtgattcttcttcagattca 29253331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 34791961 - 34791918
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34791961 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34791918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 35262072 - 35262115
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35262072 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35262115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 35272697 - 35272740
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35272697 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35272740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 39171838 - 39171795
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  39171838 gatcttcatcagaatctccatcaggtgattcttcttcagattca 39171795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 40249677 - 40249720
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  40249677 gatcttcatcagaatctccatcaggtgattcttcttcagattca 40249720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 43091896 - 43091963
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| | ||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  43091896 actttgagtgtgctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 43091963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 43353498 - 43353541
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  43353498 gatcttcatcagaatctccatcaggtgattcttcttcagattca 43353541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 43353647 - 43353714
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||| ||| |||| ||| |||| |||||||||||||||    
T  43353647 actttgagtgagctaacaagatcttcaacacttagagtatttagatccttagcttcctcaatagcagt 43353714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 19304020 - 19303956
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||    
T  19304020 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagt 19303956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 24303691 - 24303627
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| || | ||||||||||||||||| ||||||||||||||||| ||| |||||| ||||    
T  24303691 ttgagagaacttataagatcttcaacacttagagtgtttaaatctttagcttcatcaataacagt 24303627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 28722910 - 28722850
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatag 246  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||||||    
T  28722910 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatag 28722850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 19301714 - 19301671
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  19301714 gatcttcatcagaatctccatcgggtgattcttcttcagattca 19301671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 19304163 - 19304120
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  19304163 gatcttcatcagaatctccatctggtgattcttcttcagattca 19304120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 22916604 - 22916561
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  22916604 gatcttcattagaatctccatcaggtgattcttcttcagattca 22916561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 24416770 - 24416727
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  24416770 gatcttcatcagaatctccatcaagtgattcttcttcagattca 24416727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 24803386 - 24803343
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  24803386 gatcttcatcagaatctccatctggtgattcttcttcagattca 24803343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 29253437 - 29253504
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||  |||||||||||||||    
T  29253437 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttaacttcctcaatagcagt 29253504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 43091747 - 43091790
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  43091747 gatcctcatcagaatctccatcaggtgattcttcttcagattca 43091790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 24803234 - 24803176
Alignment:
Q  195 ctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    ||||||| |||||||||||| |||||||||||||| || | ||||||||| ||||||||    
T  24803234 ctgacaaaatcttcaacactcaaagtgtttaaatccttggcttcctcaatggcagtcac 24803176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 21919703 - 21919643
Alignment:
Q  185 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaata 245  Q
    |||||||||||| | ||||||||||||||||| |||||||| |||  ||| ||||||||||    
T  21919703 tttgagagagcttataagatcttcaacacttagagtgtttagatccgtagcttcctcaata 21919643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 4e-56; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 18613475 - 18613693
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    |||||||||||||| |||||||||||| ||| ||||||||    
T  18613475 agtaggatcttcatcagaatctccatatggtgattcttcttcagattcaacaactttaagagcttttgatgactcccctttagatggcagagcaatggat 18613574  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| ||      ||||||| | ||||||| ||| ||| || |||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  18613575 ttactcttcttagcaggctcatgttcatttaaacttatctcatgaacctttagagagcttacaagatcttcaacacttaaagtgtttaaatctttagctt 18613674  T
Q  238 cctcaatagcagtcacctt 256  Q
    ||||||||||||| |||||    
T  18613675 cctcaatagcagtaacctt 18613693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 48 - 249
Target Start/End: Original strand, 17720183 - 17720391
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    |||||||| |||||| |||| ||||||||||||||||||||||||||||||   |||   |||||||||||||| ||||||||||||||| |||| ||||    
T  17720183 agtaggattttcatctgaatctccatcaggtgattcttcttcagattcaact--ttaagagcttttgatgactttcctttagatggtagagcaatagatt 17720280  T
Q  145 tactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 238  Q
    ||||  |||||| ||||||||      | ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17720281 tactcctcttagcaggttcatgttcatttagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttc 17720380  T
Q  239 ctcaatagcag 249  Q
    |||||||||||    
T  17720381 ctcaatagcag 17720391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 52 - 258
Target Start/End: Complemental strand, 25450038 - 25449822
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    |||||||| ||||||| |||||||||||||| ||||||||| ||  ||||||    | ||||||||||||||||||| ||||||||| ||||||||||||    
T  25450038 ggatcttcgtcagaatctccatcaggtgatttttcttcagactcggcaacttttagaacttttgatgacttcccttttgatggtagagcaatggatttac 25449939  T
Q  148 tattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | || || ||||||||||      ||||||||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||    
T  25449938 tctttttggaaggttcatgctcattaagacttatctcatgaactttgagagagctgataagatcttcaacactgaaagtgtttaaatctttagcttcctc 25449839  T
Q  242 aatagcagtcacctttg 258  Q
    ||| |||||||| ||||    
T  25449838 aatggcagtcacttttg 25449822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 21196474 - 21196259
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    ||||||||||||||| |||  |||||| ||||| |||||||||||||||||   |||   |||||||| ||||||||||||||||||||| |||| ||||    
T  21196474 agtaggatcttcatctgaacctccatctggtgaatcttcttcagattcaact--ttaagagcttttgaagacttccctttagatggtagatcaattgatt 21196377  T
Q  145 tactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 238  Q
    |||| ||||||| |||      |||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  21196376 tactcttcttagcaggctcatgttcatttagagttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgttcaaatctttagcttc 21196277  T
Q  239 ctcaatagcagtcacctt 256  Q
    |||||||||||| |||||    
T  21196276 ctcaatagcagtgacctt 21196259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 52 - 258
Target Start/End: Complemental strand, 21126144 - 21125928
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaac--tta--gcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| || ||  |||  |||||||| ||||| ||||| ||| ||| | |||||||||| |    
T  21126144 ggatcctcatcagaatccccatcaggagattcttcttcagattccacgacctttaatgcttttgaagactttccttttgattgtatagcaatggatttgc 21126045  T
Q  148 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | |||||  |||      ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21126044 ttttcttgaaagattcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctc 21125945  T
Q  242 aatagcagtcacctttg 258  Q
    ||||||| |||||||||    
T  21125944 aatagcaatcacctttg 21125928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 22445103 - 22444931
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||| || ||||||||    
T  22445103 agtagaatcttcatcaaaatctccattaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggttgagcaatggat 22445004  T
Q  144 ttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaa 210  Q
    ||||| ||||||||      | ||||||||||||||||| ||| ||||||||||||||| | |||||||||||    
T  22445003 ttactcttcttagaggattcatgttcattaagacttatctcatgaactttgagagagctaataagatcttcaa 22444931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 210
Target Start/End: Complemental strand, 22450337 - 22450165
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||||||||||||||||    ||||||||||||||||||||| |||||| || ||||||||    
T  22450337 agtagaatcttcatcaaaatctccattaggtgattcttcttcagattcaacaactttaagagcttttgatgacttcccttttgatggttgagcaatggat 22450238  T
Q  144 ttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaa 210  Q
    ||||| ||||||||      | ||||||||||||||||| ||| ||||||||||||||| | |||||||||||    
T  22450237 ttactcttcttagaggattcatgttcattaagacttatctcatgaactttgagagagctaataagatcttcaa 22450165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 258
Target Start/End: Complemental strand, 21207593 - 21207377
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaac-tta---gcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    ||||| ||||||||||  |||||||| ||||||||||||||||| || || |||   |||||||| ||||| || || ||| ||| | |||||||||| |    
T  21207593 ggatcctcatcagaatccccatcaggagattcttcttcagattccacgaccttaaatgcttttgaagactttccatttgatagtaaagcaatggatttgc 21207494  T
Q  148 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | |||||  |||      ||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  21207493 ttttcttgaaagattcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttcaacactcaaagtgtttaaatctttagcttcctc 21207394  T
Q  242 aatagcagtcacctttg 258  Q
    ||||||| |||||||||    
T  21207393 aatagcaatcacctttg 21207377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 23023176 - 23023394
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||| || |||||||    ||| ||||||||| | |||||  ||||||   ||||||||    
T  23023176 agtaggatcctcatcagaatctccattcggtgattcttcttcagactccacaactttgagagcctttgatgaccttcctttgaatggtaaggcaatggat 23023275  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    || || ||||| || |      ||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||| ||    
T  23023276 tttcttttcttggatgactcatgttcattaagactaatctcatgaactttaagagagctgacaagatcttcaacacttagagtgttcaaatctttagctt 23023375  T
Q  238 cctcaatagcagtcacctt 256  Q
    |||||||||||||||||||    
T  23023376 cctcaatagcagtcacctt 23023394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 234
Target Start/End: Original strand, 20943070 - 20943272
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    |||||||| |||||| |||| ||||| ||||||||||||||||||||||||   |||   ||| || ||||||| ||||||||||||||| |||| ||||    
T  20943070 agtaggattttcatctgaatctccattaggtgattcttcttcagattcaact--ttaagagctctttatgactttcctttagatggtagagcaattgatt 20943167  T
Q  145 tactattcttagaag------gttcattaa---------gacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatc 229  Q
    |||| ||||||| ||      ||||||| |         |||| ||| ||| |||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  20943168 tactcttcttagcagactcatgttcatttactcttctttgactaatctcatgaactttgatagacctgacaagatcttcaacacctaaagtgtttaaatc 20943267  T
Q  230 tttag 234  Q
    |||||    
T  20943268 tttag 20943272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 206 - 258
Target Start/End: Complemental strand, 22431580 - 22431528
Alignment:
Q  206 ttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22431580 ttcaacacttaaagtgtttaaatctttagcttcctcaatagcagtcacctttg 22431528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Original strand, 4176424 - 4176573
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggtt------cattaagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||||| ||||||||||||| |||||||| | ||      |||| | ||| ||  |||  |||||||| ||||| |||    
T  4176424 ttttgaagtctttcctttagatggtagagcaatggatttactcttcttagaggttttatgctcatttaaactcatttcatgcactttgagtgagctaaca 4176523  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  4176524 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 4176573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 7691170 - 7691021
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| ||||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | | ||| ||  |||  |||||||| || || |||    
T  7691170 ttttgaagactttcctttagatggtaaagcaatggatttactcttcttagaggattcatgctcatttaaactcatttcatgcactttgagtgaactaaca 7691071  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  7691070 agatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 7691021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 253
Target Start/End: Original strand, 22017627 - 22017837
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca----acaacttagcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||     |   |  ||||| |||||||| ||||||||||||||| |||| |||||| |    
T  22017627 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtatgctttggatgactttcctttagatggtagagcaatagatttatt 22017726  T
Q  149 attcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| ||      | | ||||| ||||| ||  |||  |||||||| || |||||||||| ||||||||| |||||||||| ||| |||| |||||||    
T  22017727 cttctttgaggattcatgctcattcagactcatttcatgtactttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctca 22017826  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  22017827 atggcagtcac 22017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 107 - 250
Target Start/End: Complemental strand, 35639738 - 35639589
Alignment:
Q  107 ttttgatgacttccctttagatggtagaacaatggatttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgaca 200  Q
    |||||| | ||| ||||||||||||| | ||||||||||||| |||||||| | |||||      | ||||| ||  |||  |||||||| ||||| |||    
T  35639738 ttttgaggtctttcctttagatggtaaagcaatggatttactcttcttagaggtttcatgctcatttagactcatttcatgcactttgagtgagctaaca 35639639  T
Q  201 agatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  35639638 agatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 35639589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 3180805 - 3180872
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  3180805 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 3180872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 5641327 - 5641260
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5641327 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 5842408 - 5842475
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  5842408 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 5842475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 7516478 - 7516545
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  7516478 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 7516545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 12615940 - 12615873
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  12615940 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12615873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 12739732 - 12739799
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  12739732 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 12739799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 21876352 - 21876419
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  21876352 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 21876419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 36238047 - 36237980
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  36238047 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 36237980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 38093663 - 38093730
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  38093663 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38093730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 38104289 - 38104356
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  38104289 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38104356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 47609553 - 47609486
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  47609553 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 47609486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 51630809 - 51630742
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  51630809 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 51630742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 3180656 - 3180699
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  3180656 gatcttcatcagaatctccatcaggtgattcttcttcagattca 3180699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 5641483 - 5641440
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5641483 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5641440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 5842259 - 5842302
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  5842259 gatcttcatcagaatctccatcaggtgattcttcttcagattca 5842302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 7516329 - 7516372
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  7516329 gatcttcatcagaatctccatcaggtgattcttcttcagattca 7516372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 7691237 - 7691194
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  7691237 gatcttcatcagaatctccatcaggtgattcttcttcagattca 7691194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 12616089 - 12616046
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  12616089 gatcttcatcagaatctccatcaggtgattcttcttcagattca 12616046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 250
Target Start/End: Original strand, 19186409 - 19186476
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||| || |||| ||| |||| |||||||||||||||    
T  19186409 actttgagtgagctaacaagatcttcaacacttaacgtatttagatccttagcttcctcaatagcagt 19186476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 20874986 - 20874779
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca----acaacttagcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||     |   | |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  20874986 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 20874887  T
Q  149 attcttagaaggt------tcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |      ||||| ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||| |||    
T  20874886 cttcttagaggattcattctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcatca 20874787  T
Q  243 atagcagt 250  Q
    || |||||    
T  20874786 atggcagt 20874779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 21876203 - 21876246
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  21876203 gatcttcatcagaatctccatcaggtgattcttcttcagattca 21876246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 35639805 - 35639762
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  35639805 gatcttcatcagaatctccatcaggtgattcttcttcagattca 35639762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 36238196 - 36238153
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  36238196 gatcttcatcagaatctccatcaggtgattcttcttcagattca 36238153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 38104140 - 38104183
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38104140 gatcttcatcagaatctccatcaggtgattcttcttcagattca 38104183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 47609702 - 47609659
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  47609702 gatcttcatcagaatctccatcaggtgattcttcttcagattca 47609659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 51630958 - 51630915
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  51630958 gatcttcatcagaatctccatcaggtgattcttcttcagattca 51630915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 4176357 - 4176400
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  4176357 gatcttcatctgaatctccatcaggtgattcttcttcagattca 4176400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Original strand, 19186260 - 19186303
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||| |||||||||| ||||||||||||||||||||||||||||    
T  19186260 gatcctcatcagaatctccatcaggtgattcttcttcagattca 19186303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 12739584 - 12739626
Alignment:
Q  54 atcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  12739584 atcttcatcagaatctccatcgggtgattcttcttcagattca 12739626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 51 - 96
Target Start/End: Original strand, 27857098 - 27857143
Alignment:
Q  51 aggatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||||| |||| |||| || |||||||||||||||    
T  27857098 aggatcttcatcagaatctccagcaggagactcttcttcagattca 27857143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 47624 - 47843
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||| ||| ||||||||    
T  47624 agtaggatctccatcaaaatctccatcaggtgattcttcttcagattcaacaactttaagagcttttgatgacttccctttagatggcagagcaatggat 47723  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||| || |||      |||||||||||||| || ||| ||||||||||||||| ||| |||| ||||||| ||| |||||||||||||||| ||    
T  47724 ttactcttcctaaaaggttcatgttcattaagacttctctcatgaactttgagagagctaacatgatcatcaacac-taatgtgtttaaatctttagctt 47822  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  47823 cctcaatagcagtcacctttg 47843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 109; Significance: 7e-55; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 48 - 258
Target Start/End: Original strand, 209713 - 209933
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |    ||||||| ||||||| ||| | ||||||||| ||||||||    
T  209713 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattccacaacctttaaagcttttaatgactttcctcttgatggtagagcaatggat 209812  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    || || |||||  |||      ||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  209813 ttgcttttcttgaaagattcatgttcattaagacttatctcatgaactttgagagagctgacaagatcctcaacacttaaagtgtttaaatctttagctt 209912  T
Q  238 cctcaatagcagtcacctttg 258  Q
      |||||||||||||||||||    
T  209913 aatcaatagcagtcacctttg 209933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 48 - 229
Target Start/End: Complemental strand, 43515 - 43324
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||| |||| |||    
T  43515 agtaggatcttcatcagaatctccatcaggtgattcttcttcagattcaacaactttcaaagcttttgatgacttccctttagatggtagagcaatagat 43416  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatc 229  Q
    |||||  | |||| ||      ||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  43415 ttactccttttagtagactcatgttcattgagacttatctcatgaactttgagagagctgacaagatcttaaacacttaaagtgtttaaatc 43324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 52 - 258
Target Start/End: Complemental strand, 27444 - 27228
Alignment:
Q  52 ggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    ||||||||||||||||  |||||||||||||||||||||||||| || || |    ||||||||||||||| ||| | ||||||||| |||||||||| |    
T  27444 ggatcttcatcagaatccccatcaggtgattcttcttcagattccacgaccttcaaagcttttgatgactttcctcttgatggtagagcaatggatttgc 27345  T
Q  148 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | ||||| ||||      ||||||| ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  27344 ttttcttggaagattcatgttcattgagacttatctcatgaactttgagagagccgacaagatcttcaacacttaaagtgtttaaatctttagcttcctc 27245  T
Q  242 aatagcagtcacctttg 258  Q
    ||||| |||||||||||    
T  27244 aatagtagtcacctttg 27228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 48 - 258
Target Start/End: Complemental strand, 111399 - 111179
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||| ||||| |    | ||||||||||||| ||| | ||||||||| ||||| ||    
T  111399 agtaggatcttcgtcagaatccccatcaggtgattcttcttcagattccacaacctttaaaacttttgatgactttcctcttgatggtagagcaatgtat 111300  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| |||||  |||      ||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  111299 ttacttttcttgaaagattcatgttcattaagacttatctcatgaactttgagagagctgacaatatcctcaacacttaaagtgtttaaatctttaggtt 111200  T
Q  238 cctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||    
T  111199 cctcaatagcagtcacctttg 111179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 49 - 250
Target Start/End: Original strand, 12264 - 12472
Alignment:
Q  49 gtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggattt 145  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||   |||   ||| |||||||||| ||||||||||||||| |||| |||||    
T  12264 gtaggatcttcatctgaatctccatcaggtgattcttcttcagattcaact--ttaagagctcttgatgactttcctttagatggtagagcaattgattt 12361  T
Q  146 actattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcc 239  Q
    ||| ||||||| |||      |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12362 actcttcttagcaggctcatgttcattgagacttatctcatgaacattgagagagctgacaagatcttcaacacttaaagtgtttaagtctttagcttcc 12461  T
Q  240 tcaatagcagt 250  Q
    || ||||||||    
T  12462 tctatagcagt 12472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 97; Significance: 1e-47; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 6967 - 7182
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactta---gcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    ||||||||||||| | |||| |||||||||||| |||||||||||||||||   |||   |||||||| |||||||||||||||||||||  ||| ||||    
T  6967 agtaggatcttcacctgaatctccatcaggtgaatcttcttcagattcaact--ttaagagcttttgaagacttccctttagatggtagagtaattgatt 7064  T
Q  145 tactattcttag-aag-----gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttc 238  Q
    |||| ||||||| |||     ||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||    
T  7065 tactcttcttagcaagctcatgttcatttagacttatctcatgaactttgagagagctgacaagatcttcaacacttaaagtgttcaaatatttagcttc 7164  T
Q  239 ctcaatagcagtcacctt 256  Q
    |||||||||||| |||||    
T  7165 ctcaatagcagtaacctt 7182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 34590 - 34454
Alignment:
Q  120 cctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacac 213  Q
    ||||||||||||||| ||||||||||||| |||||||| |      | ||||| | ||| ||  |||  || ||||| || |||||||||||||||||||    
T  34590 cctttagatggtagagcaatggatttactcttcttagaggactcatgctcatttaaactcatttcatgcaccttgagggaactgacaagatcttcaacac 34491  T
Q  214 ttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||||||| ||| |||| |||||||||||||||    
T  34490 ttaaagtgtttagatccttagcttcctcaatagcagt 34454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 34670 - 34627
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  34670 gatcttcatcagaatctccatcaggtgattcttcttcagattca 34627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 95; Significance: 1e-46; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 11869 - 11651
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||| | ||||||| |||| |||||||| |||| || |||||    ||||||||||||||||||||||||||||||| ||||  ||    
T  11869 agtaggatcttcatcagagtctccatcaagtgactcttcttctgatttaataactttaagagcttttgatgacttccctttagatggtagagcaataaat 11770  T
Q  144 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| |||      |||||| ||||||||| ||| ||| |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||    
T  11769 ttacttttcttagcaggctcatgttcatttagacttatctcatgaaccttgagaaagctgacaagatcttcaacacttcaagtttttaaatctttagctt 11670  T
Q  238 cctcaatagcagtcacctt 256  Q
    ||||||||||||| |||||    
T  11669 cctcaatagcagtaacctt 11651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 48 - 256
Target Start/End: Complemental strand, 16542 - 16324
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||||| | ||||||| |||| |||||||| |||| || |||||    ||||||||||||||||||||||||||||||| ||||  ||    
T  16542 agtaggatcttcatcagagtctccatcaagtgactcttcttctgatttaataactttaagagcttttgatgacttccctttagatggtagagcaataaat 16443  T
Q  144 ttactattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||||| ||||||| |||      |||||| ||||||||| ||| ||| |||||| ||||||||||||||||||||||| |||| ||||||||||||| ||    
T  16442 ttacttttcttagcaggctcatgttcatttagacttatctcatgaaccttgagaaagctgacaagatcttcaacacttcaagtttttaaatctttagctt 16343  T
Q  238 cctcaatagcagtcacctt 256  Q
    ||||||||||||| |||||    
T  16342 cctcaatagcagtaacctt 16324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 94; Significance: 6e-46; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 55 - 258
Target Start/End: Complemental strand, 67173 - 66960
Alignment:
Q  55 tcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttactat 150  Q
    |||||||||||||  |||||||||||||||||||||||||| || || |    | ||||||||||||| ||||| ||||||||| |||||||||| || |    
T  67173 tcttcatcagaatccccatcaggtgattcttcttcagattccacgacctttaaaacttttgatgactttccttttgatggtagagcaatggattttcttt 67074  T
Q  151 tcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaat 244  Q
    ||||  |||      ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||| |||||||||||| ||| |||||||||    
T  67073 tcttgaaagattcatgttcattaagacttatctcatgaactttgagagagctgacaagatcctcaacacttaaggtgtttaaatctctagcttcctcaat 66974  T
Q  245 agcagtcacctttg 258  Q
    |||| |||||||||    
T  66973 agcaatcacctttg 66960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 256
Target Start/End: Complemental strand, 166460 - 166247
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||  |||||| |||||||||||||||||||||  | | | |    |||| |||| ||| ||||||||||||||| |||| |||||| |    
T  166460 gatcttcatcagaacctccatctggtgattcttcttcagattcactagccttgtatgctttagatggctttcctttagatggtagagcaatagatttatt 166361  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || | |||||      | || || ||  ||| ||| ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||| |||    
T  166360 cttctttgaggattcatgctcattcaggctcatttcatgaaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcttca 166261  T
Q  243 atagcagtcacctt 256  Q
    || ||||| |||||    
T  166260 atggcagtaacctt 166247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 48 - 256
Target Start/End: Original strand, 6979 - 7193
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttagcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    ||||||||||||||| || | ||||||||||||||||||||||||||||||     |||| |||||||||| ||||||||||  || || || |||||||    
T  6979 agtaggatcttcatctgactctccatcaggtgattcttcttcagattcaacttaagagctcttgatgactttcctttagatgacagcacgattgatttac 7078  T
Q  148 tattcttagaagg------ttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctc 241  Q
    | ||||||| |||      |||||| ||||| ||| ||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  7079 tcttcttagtaggctcatgttcattgagactaatctcatgaactttgagagagctgacaagatcatcaacacttaaattgtttaaatctttagcttcctc 7178  T
Q  242 aatagcagtcacctt 256  Q
    ||||||||| |||||    
T  7179 aatagcagtaacctt 7193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 48 - 246
Target Start/End: Complemental strand, 1990 - 1782
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    ||||||||||| |||||||| |||||||||||| ||||||||||||| || |||||    || ||| ||||||||| |||||||||| ||| |||| |||    
T  1990 agtaggatctttatcagaatctccatcaggtgactcttcttcagatttaataactttaagagttttagatgacttcactttagatggaagagcaatagat 1891  T
Q  144 ttactattcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagttt 237  Q
    ||  | ||||||| ||| ||||      | ||||||||| ||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||    
T  1890 tttgtcttcttagtaggctcatgtttatttagacttatctcatgaaccttgagagagttgacaagatcttcaacacttaaaatgtttaaatctttagctt 1791  T
Q  238 cctcaatag 246  Q
    |||||||||    
T  1790 cctcaatag 1782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 17549 - 17647
Alignment:
Q  160 gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    ||||||| ||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17549 gttcattgagacttatctcatgaacttttagagagctgacaagatcttcaacacttaaagtgtttaaatctttagcttcctcaatagaagtcacctttg 17647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 98
Target Start/End: Original strand, 14581 - 14631
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaac 98  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||||||||||    
T  14581 agtaggatcttcatcaaaatcttcatcaagtgattcttcttcagattcaac 14631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 216
Target Start/End: Complemental strand, 25888 - 25711
Alignment:
Q  48 agtaggatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggat 143  Q
    |||||||||||||||| | | |||||||||||| |||| ||||||||||| |||||    ||||||||||||||||||||||||||||||| |||| |||    
T  25888 agtaggatcttcatcaaagtctccatcaggtgactctt-ttcagattcaataactttaagagcttttgatgacttccctttagatggtagagcaatagat 25790  T
Q  144 ttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacactta 216  Q
    ||||| ||||||| ||      ||||||| ||||||||  ||| ||| ||||||||||| |||||||||||||||||||    
T  25789 ttactcttcttagcaggcgcatgttcatttagacttatttcatgaaccttgagagagctaacaagatcttcaacactta 25711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 3267 - 3057
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    | |    |||||| |||||||| ||||||||||||||| |||| || |||||    
T  3267 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtaagctttggatgactttcctttagatggtagagcaatagacttact 3168  T
Q  149 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || |      | ||||| ||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  3167 cttctttgaggactcatgctcattcagactcatttcatgaactttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctca 3068  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  3067 atggcagtcac 3057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0630 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0630
Description:

Target: scaffold0630; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 53 - 144
Target Start/End: Complemental strand, 3935 - 3840
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatt 144  Q
    |||||||| |||| | |||||||||||||||||||||||||||||||||||    || |||||||||||||||||||||||||||| |||||||||    
T  3935 gatcttcaccagagtctccatcaggtgattcttcttcagattcaacaactttaagagattttgatgacttccctttagatggtagagcaatggatt 3840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 53353 - 53286
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| |||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  53353 actttgagtgagctaacaagatcttcaacacttaaagtgtttagatccttagcttcctcaatagcagt 53286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 44945 - 44735
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||    | |    |||||| |||||||| ||||||||||||||| ||||  | |||||    
T  44945 gatcttcatcagaatctccatctggcgattcttgttcagattcactggccttgtaagctttggatgactttcctttagatggtagagcaataaacttact 44846  T
Q  149 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || |      | ||||| ||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||| |    
T  44845 cttctttgaggacgcatgctcattcagactcatttcatgaactttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctta 44746  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  44745 atggcagtcac 44735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 55248 - 55038
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| || ||||||| ||||||||||    | |    |||||| |||||||| ||||||||||||||| ||||  | |||||    
T  55248 gatcttcatcagaatctccatctggcgattcttgttcagattcactggccttgtaagctttggatgactttcctttagatggtagagcaataaacttact 55149  T
Q  149 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| || |      | ||||| ||||| ||  ||| ||||||||| || ||||||||||||||||||||||||||||||| ||| |||| ||||| |    
T  55148 cttctttgaggacgcatgctcattcagactcatttcatgaactttgagggaactgacaagatcttcaacacttaaagtgtttagatccttagcttcctta 55049  T
Q  243 atagcagtcac 253  Q
    || ||||||||    
T  55048 atggcagtcac 55038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 53 - 256
Target Start/End: Complemental strand, 1448 - 1235
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaacttag----cttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| | |||| |||||||||||||||||||||  | | | |    |||| |||| ||| ||||||||||||||| |||| |||||| |    
T  1448 gatcttcatcagaatcttcatctggtgattcttcttcagattcactagccttgtatgctttagatggctttcctttagatggtagagcaatagatttatt 1349  T
Q  149 attcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| ||||      | ||||| || || ||  ||| ||| ||||| || |||||||||| ||||||||| |||||||||| ||| |||| |||||||    
T  1348 cttctttgaagactcatgctcatttaggctcatttcatgaaccttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctca 1249  T
Q  243 atagcagtcacctt 256  Q
    || |||||||||||    
T  1248 atggcagtcacctt 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 1160 - 1089
Alignment:
Q  185 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    |||||| || |||||||||| ||||||||| |||||||||| ||| |||| ||||||||| |||||||||||    
T  1160 tttgagggaactgacaagattttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcacctt 1089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 75576 - 75784
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||| ||||    | |||| ||| |||| ||||||||||| ||| |||| |||||  |    
T  75576 gatcttcatcagaatctccatcagaggattcttcttcagattcaacgactttgagatctttagataactttcctttagatggaagagcaatagatttttt 75675  T
Q  149 attcttag------aaggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacact-taaagtgtttaaatctttagtttcctc 241  Q
     |||||||       | | ||||| ||||||||  ||| ||| |||| | |||| |||||||||||||||||  ||||||||||||||||||| ||| |     
T  75676 cttcttagcaaactcatgctcattgagacttatttcatgaaccttgaaatagcttacaagatcttcaacactcaaaagtgtttaaatctttagcttcttt 75775  T
Q  242 aatagcagt 250  Q
    |||||||||    
T  75776 aatagcagt 75784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 23737 - 23953
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca--------acaa-ctt----agcttttgatgacttccctttagatggtagaacaat 139  Q
    ||||||||||||||| ||||||||||||||||||||||||||||        | || |||    || ||| || ||||||||||||||||||||| ||||    
T  23737 gatcttcatcagaatctccatcaggtgattcttcttcagattcactggccttataagctttagaagatttggaggacttccctttagatggtagagcaat 23836  T
Q  140 ggatttactattcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatcttta 233  Q
     |||||||| ||||||||      | | ||||| ||||| ||  |||  ||||||||  | |||||||||||||||||||| ||||| |||| ||| |||    
T  23837 agatttactcttcttagaggactcatgctcatttagactcatttcatgcactttgaggaaactgacaagatcttcaacactaaaagtatttagatcctta 23936  T
Q  234 gtttcctcaatagcagt 250  Q
    | |||||||||||||||    
T  23937 gcttcctcaatagcagt 23953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 183 - 250
Target Start/End: Complemental strand, 38573 - 38506
Alignment:
Q  183 actttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagt 250  Q
    |||||||| ||||| ||||||||||||||||||||||| |||| ||| |||| |||||||||||||||    
T  38573 actttgagtgagctaacaagatcttcaacacttaaagtatttagatccttagcttcctcaatagcagt 38506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 38722 - 38679
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  38722 gatcttcatcagaatctccatcaggtgattcttcttcagattca 38679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1820 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1820
Description:

Target: scaffold1820; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 256
Target Start/End: Original strand, 84 - 154
Alignment:
Q  186 ttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctt 256  Q
    ||||| || |||||||||||||||||||| |||||||||| ||| |||| ||||||||| |||||||||||    
T  84 ttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcacctt 154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 253
Target Start/End: Complemental strand, 3049 - 2838
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaa--ctta---gcttttgatgacttccctttagatggtagaacaatggatttac 147  Q
    ||||||||||||||| |||||| || |||||||||||||||||| |||  |||    ||||| |||| ||| |||||| |||||||| |||| |||||||    
T  3049 gatcttcatcagaatctccatctggcgattcttcttcagattca-caagccttgtatgctttagatggctttcctttatatggtagagcaatagatttac 2951  T
Q  148 tattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtg-tttaaatctttagtttcct 240  Q
    | ||||| || |      | ||||| ||||| ||  ||| ||| ||||| || |||||||||||||||||||| |||||| |||| ||| |||| |||||    
T  2950 tcttctttgaggactcatgctcattcagactcatttcatgaaccttgagggaactgacaagatcttcaacactcaaagtgttttagatccttagattcct 2851  T
Q  241 caatagcagtcac 253  Q
    |||| ||||||||    
T  2850 caatggcagtcac 2838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1507 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1507
Description:

Target: scaffold1507; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 250
Target Start/End: Complemental strand, 1138 - 931
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca----acaacttagcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| |||||||||||||||||||||     |   |  ||||| |||||||| ||||||||||||||| |||| ||| || |    
T  1138 gatcttcatcagaatctccatctggtgattcttcttcagattcactggccttgtatgctttagatgactttcctttagatggtagagcaatagatctatt 1039  T
Q  149 attcttaga------aggttcattaagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     ||||| ||      | | ||||| | ||| ||  |||  |||||||| || |||||||||||||||||||| |||||||||| ||| |||  |||||||    
T  1038 cttctttgaggattcatgctcattcaaactcatttcatgtactttgagggaactgacaagatcttcaacactcaaagtgtttagatccttaacttcctca 939  T
Q  243 atagcagt 250  Q
    ||||||||    
T  938 atagcagt 931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 9532 - 9489
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  9532 gatcttcatcagaatctccatcaggtgattcttcttcagattca 9489  T

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Target: scaffold0068; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 9458 - 9322
Alignment:
Q  114 gacttccctttagatggtagaacaatggatttactattcttagaag------gttcattaagacttatcccataaactttgagagagctgacaagatctt 207  Q
    ||||| ||||||||||||||| |||| |||||||| |||||||| |      | ||||| ||||| ||  |||  || ||||| || |||||||||||||    
T  9458 gactttcctttagatggtagagcaatagatttactcttcttagaggactcatgctcattcagactcatttcatgtaccttgagggaactgacaagatctt 9359  T
Q  208 caacacttaaagtgtttaaatctttagtttcctcaat 244  Q
    ||||||| |||||||||| ||| |||| |||||||||    
T  9358 caacactcaaagtgtttagatccttagcttcctcaat 9322  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 250
Target Start/End: Original strand, 3796 - 4003
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggatttact 148  Q
    ||||||||||||||| |||||| ||||| |||||||||||||||    | |    |||||| || ||||| ||||||||||||||| |||| ||| || |    
T  3796 gatcttcatcagaatctccatctggtgactcttcttcagattcactggccttgtaagctttggaagactttcctttagatggtagagcaatagatctatt 3895  T
Q  149 attcttagaaggttcat------taagacttatcccataaactttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctca 242  Q
     |||||||| | |||||      | ||||| ||  |||  || ||||| || |||||||||||||||||||| |||||||||| ||| |||| |||||||    
T  3896 cttcttagaggattcatgctcattcagactcatttcatgtaccttgagggaactgacaagatcttcaacactcaaagtgtttagatccttagcttcctca 3995  T
Q  243 atagcagt 250  Q
    || |||||    
T  3996 atggcagt 4003  T

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Target: scaffold0925 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0925
Description:

Target: scaffold0925; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 3832 - 3775
Alignment:
Q  196 tgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    ||||||||||||||||||| |||||||||| ||| |||| ||||||||| ||||||||    
T  3832 tgacaagatcttcaacactcaaagtgtttagatccttagcttcctcaatggcagtcac 3775  T

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Target: scaffold0925; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 3985 - 3942
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| ||| || |||||||||||||||||||||    
T  3985 gatcttcatcagaatctccgtctggtgattcttcttcagattca 3942  T

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Target: scaffold0758 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 2807 - 2875
Alignment:
Q  185 tttgagagagctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    |||||||||||| |  |||||||| ||||||| |||||||| ||| |||| ||||||||||||||||||    
T  2807 tttgagagagcttatgagatcttcgacacttagagtgtttagatccttagcttcctcaatagcagtcac 2875  T

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Target: scaffold0892 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 165 - 122
Alignment:
Q  53 gatcttcatcagaatttccatcaggtgattcttcttcagattca 96  Q
    ||||||||||||||| |||||| |||||||||||||||||||||    
T  165 gatcttcatcagaatctccatctggtgattcttcttcagattca 122  T

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Target: scaffold0443 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 2609 - 2555
Alignment:
Q  204 tcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcacctttg 258  Q
    |||||||||||||||||||||| ||| |||| ||||||||| |||||||| ||||    
T  2609 tcttcaacacttaaagtgtttagatccttagcttcctcaatggcagtcacttttg 2555  T

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Target: scaffold0185 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 31752 - 31810
Alignment:
Q  195 ctgacaagatcttcaacacttaaagtgtttaaatctttagtttcctcaatagcagtcac 253  Q
    ||||||||||||||||||||||||||||| | ||| |||  ||||||||| ||||||||    
T  31752 ctgacaagatcttcaacacttaaagtgttaagatccttaacttcctcaatggcagtcac 31810  T

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Target: scaffold0231 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 145
Target Start/End: Complemental strand, 20255 - 20161
Alignment:
Q  55 tcttcatcagaatttccatcaggtgattcttcttcagattcaacaactt----agcttttgatgacttccctttagatggtagaacaatggattt 145  Q
    ||||||| ||||| || |||||| |||||||||||||||||||  ||||    |||||| |||||||| ||||||||||| ||| |||| |||||    
T  20255 tcttcattagaatctcgatcaggggattcttcttcagattcaatgactttgagagctttagatgactttcctttagatggcagagcaatagattt 20161  T

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