View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11048_low_5 (Length: 543)

Name: NF11048_low_5
Description: NF11048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11048_low_5
NF11048_low_5
[»] chr3 (22 HSPs)
chr3 (19-536)||(5248715-5249232)
chr3 (23-536)||(4389910-4390408)
chr3 (26-536)||(5266617-5267112)
chr3 (217-437)||(6723230-6723450)
chr3 (54-157)||(8470483-8470586)
chr3 (19-157)||(5262709-5262847)
chr3 (25-157)||(5279585-5279717)
chr3 (23-95)||(5297718-5297790)
chr3 (45-157)||(6839905-6840017)
chr3 (392-437)||(6140944-6140989)
chr3 (480-537)||(6915638-6915695)
chr3 (72-149)||(6916041-6916118)
chr3 (43-157)||(6795619-6795733)
chr3 (359-437)||(6850572-6850650)
chr3 (387-437)||(6915759-6915809)
chr3 (23-152)||(6244230-6244359)
chr3 (392-437)||(6257860-6257905)
chr3 (392-437)||(6264340-6264385)
chr3 (480-537)||(6592788-6592845)
chr3 (480-537)||(7748539-7748596)
chr3 (123-155)||(6946205-6946237)
chr3 (45-157)||(7586788-7586900)
[»] chr7 (1 HSPs)
chr7 (72-136)||(6574347-6574411)
[»] chr4 (1 HSPs)
chr4 (126-165)||(25243555-25243594)
[»] scaffold1643 (2 HSPs)
scaffold1643 (54-152)||(1089-1187)
scaffold1643 (348-437)||(828-917)


Alignment Details
Target: chr3 (Bit Score: 494; Significance: 0; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 494; E-Value: 0
Query Start/End: Original strand, 19 - 536
Target Start/End: Complemental strand, 5249232 - 5248715
Alignment:
Q  19 ggtatgatattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagc 118  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5249232 ggtatgatattaaggagttgacggaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagc 5249133  T
Q  119 aaaattaaaagataagaagcatttggaagaattacatatcatatacagtgacaatgccactagagaaatcaataacttgataattgaaagggaaatgact 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5249132 aaaattaaaagataagaagcatttggaagaattacatatcatatacagtgacaatgccactagagaaatcaataacttgataattgaaagggaaatgact 5249033  T
Q  219 gtcttggaggcccttgaaccaaatagtaaccttaatatgctgaccatcaaacactatcgaggcactagctttccaaactggcttcggggtagtcatttgt 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5249032 gtcttggaggcccttgaaccaaatagtaaccttaatatgctgaccatcaaacactatcgaggcactagctttccaaactggcttgggggtagtcatttgt 5248933  T
Q  319 tcaatttagaatctctggatccggtaggatgtgaattttgttcccattttccaccatttgagttgtttccctatctcaagaagctttatatttcaggttg 418  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5248932 tcaatttagaatctctggatctggtaggatgtgaattttgttcccatttgccaccatttgagttgtttccctatctcaagaagctttatatttcaggttg 5248833  T
Q  419 tcatggaatagagatcattaattcatcaaatgatccattcaagtttctcgaatatttgtattttgagaacatgtccaattggaagaaatggttatgtgtt 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5248832 tcatggaatagagatcattaattcatcaaatgatccattcaagtttctcgaatttttgtattttgagaacatgtccaattggaagaaatggttatgtgtt 5248733  T
Q  519 gagtgtttccctttgctt 536  Q
    ||||||||||||||||||    
T  5248732 gagtgtttccctttgctt 5248715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 23 - 536
Target Start/End: Original strand, 4389910 - 4390408
Alignment:
Q  23 tgatattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaa 122  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4389910 tgatattaaggagttgacggaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgcgctagaagcaaaa 4390009  T
Q  123 ttaaaagataagaagcatttggaagaattacatatcatatacagtgacaatgccactagagaaatcaataacttgataattgaaagggaaatgactgtct 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   || |||||||||||||||||||                |||||| ||||||    
T  4390010 ttaaaagataagaagcatttggaagaattacatatcatatacagtgcttataccactagagaaatcaataa---------------tgaaatgtctgtct 4390094  T
Q  223 tggaggcccttgaaccaaatagtaaccttaatatgctgaccatcaaacactatcgaggcactagctttccaaactggcttcggggtagtcatttgttcaa 322  Q
    ||||||| ||| |||||||||| ||||||||||   |||||||| ||||||| || |||||||| |||||||| ||| |||||| |  |||||||| ||     
T  4390095 tggaggctcttcaaccaaatagcaaccttaataacttgaccatcgaacactaccgcggcactagttttccaaattggattcgggattttcatttgtccag 4390194  T
Q  323 tttagaatctctggatccggtaggatgtgaattttgttcccattttccaccatttgagttgtttccctatctcaagaagctttatatttcaggttgtcat 422  Q
    ||||| ||||||  ||| |  ||||||| || |||||||||| || ||||||||||||  ||||||||||||||| || |||| ||||||| | |||| |    
T  4390195 tttagtatctctaaatctgaaaggatgtcaactttgttcccagttgccaccatttgagaagtttccctatctcaataatctttgtatttcaagctgtcct 4390294  T
Q  423 ggaatagagatcattaattcatcaaatgatccattcaagtttctcgaatatttgtattttgagaacatgtccaattggaagaaatggttatgtgttgagt 522  Q
    |||||||||||||||||||||    ||| |||||||| ||| || |||  ||||   |||||| ||||||||||||||||| ||||||||||||||||      
T  4390295 ggaatagagatcattaattcaattgatgttccattcaggttccttgaaattttgcgatttgaggacatgtccaattggaaggaatggttatgtgttgaag 4390394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 26 - 536
Target Start/End: Complemental strand, 5267112 - 5266617
Alignment:
Q  26 tattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaatta 125  Q
    ||||||||| ||| | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| | | ||||||||| ||||    
T  5267112 tattaaggagttggcggaacttaaccagcttcaagggaaactttgtatttcagggttggaaaatgtcattaatcctgtagacgttgtagaagcaacatta 5267013  T
Q  126 aaagataagaagcatttggaagaattacatatcatatacagtgacaatgccactagagaaatcaataacttgataattgaaagggaaatgactgtcttgg 225  Q
    |||||||||||||||||||||||||||||||||||||||| |  |  || ||  |||||||||||||               |||||||| |||||||||    
T  5267012 aaagataagaagcatttggaagaattacatatcatatacaattcccttggcaacagagaaatcaata---------------gggaaatgtctgtcttgg 5266928  T
Q  226 aggcccttgaaccaaatagtaaccttaatatgctgaccatcaaacactatcgaggcactagctttccaaactggcttcggggtagtcatttgttcaattt 325  Q
    |||| ||| |||||||||| |||||||||| |||||||||| | ||||| | ||||||||| |||||||| |||||| ||||| ||||||||| ||||||    
T  5266927 aggctcttcaaccaaatagcaaccttaataagctgaccatcgagcactacccaggcactagttttccaaattggcttgggggttgtcatttgtccaattt 5266828  T
Q  326 agaatctctggatccggtaggatgtgaattttgttcccattttccaccatttgagttgtttccctatctcaagaagctttatatttcaggttgtcatgga 425  Q
    |  ||||||  ||| |  ||||||| ||||||||||| | || |||| |||||  ||||||||| ||||||||| ||||| ||||||| | |||| | ||    
T  5266827 atcatctctcaatctgagaggatgtaaattttgttccaagttgccacaatttggcttgtttccccatctcaagatgctttctatttcaagctgtcctaga 5266728  T
Q  426 atagagatcattaattcatcaaatgatccattcaagtttctcgaatatttgtattttgagaacatgtccaattggaagaaatggttatgtgttgagtgtt 525  Q
     | |||||||||||||||||||||  |||||||| || |||  ||   ||| ||||| |  ||||||| | ||||||| ||||||||||||||||  |||    
T  5266727 gtggagatcattaattcatcaaatagtccattcaggtctctgaaaacattgcatttttatgacatgtctagttggaaggaatggttatgtgttgaaagtt 5266628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 217 - 437
Target Start/End: Original strand, 6723230 - 6723450
Alignment:
Q  217 ctgtcttggaggcccttgaaccaaatagtaaccttaatatgctgaccatcaaacactatcgaggcactagctttccaaactggcttcggggtagtcattt 316  Q
    ||||||||||||| ||| |||||||||  ||||| |  | ||| ||||||||| ||||| |||||| |||||||||||| ||| || ||  | |||||||    
T  6723230 ctgtcttggaggctcttcaaccaaataaaaacctcatgaggctcaccatcaaagactatggaggcagtagctttccaaattgggttgggtatcgtcattt 6723329  T
Q  317 gttcaatttagaatctctggatccggtaggatgtgaattttgttcccattttccaccatttgagttgtttccctatctcaagaagctttatatttcaggt 416  Q
       |||||||| |||||| ||   | | |||||| |||| |||||||| || |||||| ||| |  ||| |||| |||| |||||||||  ||||||||     
T  6723330 acccaatttagtatctcttgaattgttgggatgtaaattctgttcccagttaccaccacttgggcagttcccctttctcgagaagctttccatttcaggc 6723429  T
Q  417 tgtcatggaatagagatcatt 437  Q
    ||| |||||||||||| ||||    
T  6723430 tgtgatggaatagagaccatt 6723450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 8470586 - 8470483
Alignment:
Q  54 cttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaagcatttggaagaattac 153  Q
    |||| |||||||||||||||||||||||| ||| ||||||||| ||| | ||||||   || |||||| || ||||||||||| ||| | |||||||||     
T  8470586 cttcgagggaaactttgtatttcagggttggaacatgtcattaatcccgaagatgcagcaggagcaaatttgaaagataagaaacatgtagaagaattaa 8470487  T
Q  154 atat 157  Q
    ||||    
T  8470486 atat 8470483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 19 - 157
Target Start/End: Complemental strand, 5262847 - 5262709
Alignment:
Q  19 ggtatgatattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagc 118  Q
    ||||||||||||||||||||  | |||||||||| |||| ||  | |||||||||||||  ||| |||||||||| |  || |||||||||| | |||||    
T  5262847 ggtatgatattaaggaattggaaaaactcaaccatcttcgagaaacactttgtatttcacagttggaaaatgtcactgatcgtgcagatgctgtggaagc 5262748  T
Q  119 aaaattaaaagataagaagcatttggaagaattacatat 157  Q
    ||| || | ||||||||  ||| |||||| ||| |||||    
T  5262747 aaatttgagagataagacacatctggaagcattgcatat 5262709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 157
Target Start/End: Complemental strand, 5279717 - 5279585
Alignment:
Q  25 atattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaatt 124  Q
    |||||||||| |||  | |||||||||| |||| ||| | |||||||||||||  ||| |||||||||| |  || |||||||||| | |||||||| ||    
T  5279717 atattaaggagttggaaaaactcaaccatcttcgaggaacactttgtatttcacagttggaaaatgtcactgatcgtgcagatgctgtggaagcaaattt 5279618  T
Q  125 aaaagataagaagcatttggaagaattacatat 157  Q
     ||| ||||||  |||||||||| ||| |||||    
T  5279617 gaaaaataagagacatttggaagtattgcatat 5279585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 5297790 - 5297718
Alignment:
Q  23 tgatattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcatt 95  Q
    ||||||||| || ||| || |||||||||| |||||||| | |||| ||||||||||||| ||||||||||||    
T  5297790 tgatattaatgagttggcaaaactcaaccatcttcaaggtacacttcgtatttcagggttggaaaatgtcatt 5297718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 6839905 - 6840017
Alignment:
Q  45 ctcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaagcatttgg 144  Q
    ||||| || |||||||||||||||||||||||||| || ||| ||||||||| ||  | ||||||   || ||||||||| ||||||||| | ||| | |    
T  6839905 ctcaatcatcttcaagggaaactttgtatttcaggattggaacatgtcattagtctcgaagatgcggcagcagcaaaattgaaagataaggaacatgtag 6840004  T
Q  145 aagaattacatat 157  Q
    |||||||| ||||    
T  6840005 aagaattaaatat 6840017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 6140989 - 6140944
Alignment:
Q  392 tctcaagaagctttatatttcaggttgtcatggaatagagatcatt 437  Q
    ||||||||||||||  |||||||| |||||||||||||||||||||    
T  6140989 tctcaagaagctttccatttcaggctgtcatggaatagagatcatt 6140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 480 - 537
Target Start/End: Complemental strand, 6915695 - 6915638
Alignment:
Q  480 tttgagaacatgtccaattggaagaaatggttatgtgttgagtgtttccctttgcttc 537  Q
    |||||| |||||||| | |||||| ||||||||||| |||| ||||||||||||||||    
T  6915695 tttgagcacatgtccgaatggaaggaatggttatgtcttgaatgtttccctttgcttc 6915638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 6916118 - 6916041
Alignment:
Q  72 atttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaagcatttggaagaa 149  Q
    |||||||||||  |||||||||||  ||||||||||||| | | |||||| || ||||||||||| ||||| ||||||    
T  6916118 atttcagggttgaaaaatgtcattgatcctgcagatgctgtggcagcaaatttgaaagataagaaacatttagaagaa 6916041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 6795619 - 6795733
Alignment:
Q  43 aactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaagcattt 142  Q
    ||||||| || |||||||| |||||| |||||| | | || ||| ||||||||| ||||| ||||||   || |||||| || ||||||||||| ||| |    
T  6795619 aactcaatcatcttcaaggaaaacttagtattttatgattggaacatgtcattaatcctgaagatgcggcaggagcaaatttgaaagataagaaacatgt 6795718  T
Q  143 ggaagaattacatat 157  Q
     ||||||||| ||||    
T  6795719 agaagaattaaatat 6795733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 359 - 437
Target Start/End: Original strand, 6850572 - 6850650
Alignment:
Q  359 ttcccattttccaccatttgagttgtttccctatctcaagaagctttatatttcaggttgtcatggaatagagatcatt 437  Q
    |||||| |||||| || ||| | |||| |||| ||||||||| ||||  |||||||| ||| |||||||||||||||||    
T  6850572 ttcccagtttccatcacttgggctgttcccctctctcaagaatctttccatttcaggctgtgatggaatagagatcatt 6850650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 6915809 - 6915759
Alignment:
Q  387 ccctatctcaagaagctttatatttcaggttgtcatggaatagagatcatt 437  Q
    |||| |||||||||||||| ||||||||| ||| |||||||||| ||||||    
T  6915809 ccctctctcaagaagctttttatttcaggctgtgatggaatagaaatcatt 6915759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 6244359 - 6244230
Alignment:
Q  23 tgatattaaggaattgacagaactcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaa 122  Q
    |||||||||| | ||| ||||||||||||| |||  ||| | |||| | |||||||||||  |||||||   |  ||| ||||||||| | | ||||||     
T  6244359 tgatattaagcagttggcagaactcaaccaccttagaggaagacttcgaatttcagggttgaaaaatgtggctgatccagcagatgctatggcagcaaat 6244260  T
Q  123 ttaaaagataagaagcatttggaagaatta 152  Q
    || ||||||||||| ||||| |||||||||    
T  6244259 ttgaaagataagaaacatttagaagaatta 6244230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 6257905 - 6257860
Alignment:
Q  392 tctcaagaagctttatatttcaggttgtcatggaatagagatcatt 437  Q
    ||||||||||||||  |||||||| |||||||||||| ||||||||    
T  6257905 tctcaagaagctttccatttcaggctgtcatggaataaagatcatt 6257860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 437
Target Start/End: Complemental strand, 6264385 - 6264340
Alignment:
Q  392 tctcaagaagctttatatttcaggttgtcatggaatagagatcatt 437  Q
    ||||||||||||||  |||||||| ||||||||| |||||||||||    
T  6264385 tctcaagaagctttccatttcaggctgtcatggagtagagatcatt 6264340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 537
Target Start/End: Original strand, 6592788 - 6592845
Alignment:
Q  480 tttgagaacatgtccaattggaagaaatggttatgtgttgagtgtttccctttgcttc 537  Q
    ||||||||||||||  | |||||| ||||||||||| ||||  |||||||||||||||    
T  6592788 tttgagaacatgtctgaatggaaggaatggttatgtcttgaaggtttccctttgcttc 6592845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 480 - 537
Target Start/End: Complemental strand, 7748596 - 7748539
Alignment:
Q  480 tttgagaacatgtccaattggaagaaatggttatgtgttgagtgtttccctttgcttc 537  Q
    |||||| |||||||  | |||||| ||||||||||| |||| ||||||||||||||||    
T  7748596 tttgagcacatgtcagaatggaaggaatggttatgtcttgaatgtttccctttgcttc 7748539  T

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Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 6946237 - 6946205
Alignment:
Q  123 ttaaaagataagaagcatttggaagaattacat 155  Q
    |||||||||||||||||||| ||||||||||||    
T  6946237 ttaaaagataagaagcatttagaagaattacat 6946205  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 45 - 157
Target Start/End: Complemental strand, 7586900 - 7586788
Alignment:
Q  45 ctcaaccagcttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaagcatttgg 144  Q
    ||||| || ||||||||| ||||||||||||||||| | ||| |||||||   ||| |  ||||||  || |||||| || ||||||||||| ||| | |    
T  7586900 ctcaatcatcttcaaggggaactttgtatttcagggatggaacatgtcatcgatcccgtggatgctgcaggagcaaatttgaaagataagaaacatgtag 7586801  T
Q  145 aagaattacatat 157  Q
    |||||||| ||||    
T  7586800 aagaattaaatat 7586788  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 6574347 - 6574411
Alignment:
Q  72 atttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaa 136  Q
    ||||||||||| ||| ||||||||| ||| |||||||||  ||||||||| || |||||||||||    
T  6574347 atttcagggttggaacatgtcattaatcccgcagatgctgcagaagcaaatttgaaagataagaa 6574411  T

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Target: chr4 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 165
Target Start/End: Original strand, 25243555 - 25243594
Alignment:
Q  126 aaagataagaagcatttggaagaattacatatcatataca 165  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  25243555 aaagataagaagcatttggaagaattacacatgatataca 25243594  T

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Target: scaffold1643 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold1643
Description:

Target: scaffold1643; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 152
Target Start/End: Complemental strand, 1187 - 1089
Alignment:
Q  54 cttcaagggaaactttgtatttcagggttagaaaatgtcattattcctgcagatgctctagaagcaaaattaaaagataagaagcatttggaagaatta 152  Q
    |||||||||||||||||||||||||| || ||| ||||||| | ||| | ||||||   |  |||||| || ||||||||||| ||| | |||||||||    
T  1187 cttcaagggaaactttgtatttcaggattggaacatgtcatcaatcccgaagatgcggcaagagcaaatttgaaagataagaaacatgtagaagaatta 1089  T

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Target: scaffold1643; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 437
Target Start/End: Complemental strand, 917 - 828
Alignment:
Q  348 tgtgaattttgttcccattttccaccatttgagttgtttccctatctcaagaagctttatatttcaggttgtcatggaatagagatcatt 437  Q
    |||| ||| |||||||||||||||||| ||| |  | |||| | ||||||||| |||| |||||||  |||| |||||||| ||||||||    
T  917 tgtggattatgttcccattttccaccacttgggcagcttccttctctcaagaatctttctatttcatattgtgatggaataaagatcatt 828  T

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