View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11049_high_9 (Length: 244)
Name: NF11049_high_9
Description: NF11049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11049_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 18 - 237
Target Start/End: Complemental strand, 46424598 - 46424379
Alignment:
| Q |
18 |
atattgacattgtcattcatatccccatacaacattaccaattcaccttcactcattcataaccacaattatttctctactaatcacaaacctccctttc |
117 |
Q |
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| T |
46424598 |
atattgacattgccattcatatccccatacaacattaccaattcaccttcactcattcataaccacaattatttctctactaatcacaaacctccctttc |
46424499 |
T |
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| Q |
118 |
ttcaattcttctccgtaactaatttctctcctcttacttaattaattacctctaattatcactaatcaaatcaattaagttagttttaatatttagtttc |
217 |
Q |
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||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46424498 |
ttcaattcttctccgtaactaatttatctccttttacttaattaattacctctaattatcactaatcaaatcaattaagttagttttaatatttagtttc |
46424399 |
T |
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| Q |
218 |
gtttcagggtattcatctca |
237 |
Q |
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|||||||||||||| ||||| |
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| T |
46424398 |
gtttcagggtattcttctca |
46424379 |
T |
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