View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1104_low_108 (Length: 246)
Name: NF1104_low_108
Description: NF1104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1104_low_108 |
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Alignment Details
Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 16 - 171
Target Start/End: Original strand, 14501704 - 14501859
Alignment:
| Q |
16 |
gacgagtgcagttggctacactcgaatattttggcgtgacgattgaaatcatcaaactcgccattttcgccatacaccaccgagaaagggtgaggtaaca |
115 |
Q |
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| T |
14501704 |
gacgagtgcagttggctacactcgaatattttggcgtgacgattgaaatcatcaaactcgccattttcaccatccaccaccgagaaagggtgaggtaaca |
14501803 |
T |
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| Q |
116 |
tccttttcatattctccattttctgtttcatcattcataaatgttgattattcatc |
171 |
Q |
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| T |
14501804 |
tccttttcatattctccattttctgtttcatcattcataaatgttgattattcatc |
14501859 |
T |
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