View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1104_low_122 (Length: 208)
Name: NF1104_low_122
Description: NF1104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1104_low_122 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 48443461 - 48443289
Alignment:
| Q |
1 |
gtattcttccaacatagtgaatggcaactcatttcccaaatcaatcggcccaatgctttctttcatcaataactctgagaatggagcttgaaagcctgcc |
100 |
Q |
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| T |
48443461 |
gtattcttccaacatagtgaatggcaactcatttcccaaatcaatcggcccaatgctttctttcatcaataactctgagaatggagcttgaaagcctgcc |
48443362 |
T |
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| Q |
101 |
ttttcaagattaccaccgttctctgggacgaccatcagggaatgatggaacaaggaccttttcattattctgt |
173 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48443361 |
ttttcaagattaccaccgttctctggtacgaccatcagggaatgatggaacaaggaccttttcattattctgt |
48443289 |
T |
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