View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1104_low_14 (Length: 583)

Name: NF1104_low_14
Description: NF1104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1104_low_14
NF1104_low_14
[»] chr1 (57 HSPs)
chr1 (128-554)||(37240377-37240805)
chr1 (12-142)||(37240828-37240958)
chr1 (55-126)||(30257685-30257756)
chr1 (48-129)||(6292492-6292573)
chr1 (55-128)||(25479581-25479654)
chr1 (54-127)||(10199404-10199477)
chr1 (47-128)||(27140478-27140559)
chr1 (60-133)||(31517742-31517815)
chr1 (65-125)||(45975693-45975753)
chr1 (74-133)||(4700082-4700141)
chr1 (62-133)||(14629970-14630041)
chr1 (54-121)||(24460403-24460470)
chr1 (48-95)||(30815643-30815690)
chr1 (54-133)||(34290231-34290310)
chr1 (54-128)||(7136994-7137068)
chr1 (63-133)||(51695500-51695570)
chr1 (60-128)||(7472311-7472380)
chr1 (48-121)||(35925697-35925770)
chr1 (54-95)||(37593680-37593721)
chr1 (48-92)||(4481966-4482010)
chr1 (49-133)||(4622088-4622172)
chr1 (65-133)||(9656645-9656713)
chr1 (60-132)||(15558213-15558285)
chr1 (47-95)||(28689441-28689489)
chr1 (48-119)||(4699605-4699676)
chr1 (74-133)||(5090857-5090916)
chr1 (54-133)||(7218070-7218149)
chr1 (62-109)||(15361059-15361106)
chr1 (74-133)||(15361708-15361767)
chr1 (48-95)||(31118076-31118123)
chr1 (61-128)||(39347970-39348037)
chr1 (54-96)||(1509961-1510003)
chr1 (74-128)||(2522629-2522683)
chr1 (54-132)||(5886990-5887068)
chr1 (48-122)||(12641718-12641792)
chr1 (47-121)||(15437970-15438044)
chr1 (63-133)||(27820342-27820412)
chr1 (62-128)||(35351039-35351105)
chr1 (63-128)||(6102154-6102219)
chr1 (54-95)||(10809378-10809419)
chr1 (48-121)||(10854740-10854813)
chr1 (76-133)||(25944427-25944484)
chr1 (68-133)||(34179882-34179947)
chr1 (46-119)||(35351281-35351354)
chr1 (48-133)||(37842345-37842430)
chr1 (54-95)||(46252678-46252719)
chr1 (54-126)||(1565531-1565603)
chr1 (48-128)||(10744301-10744381)
chr1 (48-128)||(11639406-11639486)
chr1 (61-133)||(12564877-12564949)
chr1 (24-132)||(27963336-27963444)
chr1 (47-95)||(33723371-33723419)
chr1 (63-95)||(38503470-38503502)
chr1 (61-133)||(39270428-39270500)
chr1 (54-122)||(41195189-41195257)
chr1 (55-95)||(47877142-47877182)
chr1 (66-130)||(51929783-51929847)
[»] chr5 (34 HSPs)
chr5 (47-133)||(41957440-41957526)
chr5 (54-127)||(17258879-17258952)
chr5 (63-128)||(7984969-7985034)
chr5 (63-127)||(4014429-4014493)
chr5 (46-133)||(10272419-10272506)
chr5 (61-128)||(11615501-11615568)
chr5 (54-133)||(25461312-25461391)
chr5 (47-121)||(7674655-7674729)
chr5 (56-133)||(8938641-8938718)
chr5 (55-128)||(11707055-11707128)
chr5 (48-133)||(36318769-36318854)
chr5 (60-125)||(36638750-36638815)
chr5 (17-89)||(12595675-12595747)
chr5 (68-128)||(16889735-16889795)
chr5 (48-128)||(17368676-17368756)
chr5 (54-163)||(32194075-32194180)
chr5 (67-122)||(1019475-1019530)
chr5 (65-128)||(3237093-3237156)
chr5 (48-95)||(10125708-10125755)
chr5 (54-133)||(18543193-18543271)
chr5 (47-121)||(2092534-2092608)
chr5 (47-97)||(11700367-11700417)
chr5 (49-95)||(12467166-12467212)
chr5 (62-128)||(28413288-28413354)
chr5 (17-95)||(31694551-31694629)
chr5 (48-126)||(40205064-40205142)
chr5 (48-133)||(2568653-2568738)
chr5 (60-121)||(37611217-37611278)
chr5 (60-121)||(37787947-37788008)
chr5 (76-121)||(40731476-40731521)
chr5 (48-96)||(1899186-1899234)
chr5 (65-133)||(7907876-7907944)
chr5 (76-128)||(8481218-8481270)
chr5 (60-128)||(10771890-10771958)
[»] chr3 (45 HSPs)
chr3 (47-133)||(1217789-1217875)
chr3 (23-128)||(53736085-53736190)
chr3 (54-133)||(39602206-39602285)
chr3 (47-133)||(43115051-43115137)
chr3 (60-133)||(40665424-40665497)
chr3 (60-128)||(20669172-20669240)
chr3 (65-133)||(28622006-28622074)
chr3 (29-125)||(31010405-31010501)
chr3 (67-119)||(34414793-34414845)
chr3 (54-121)||(24785212-24785279)
chr3 (60-95)||(36887537-36887572)
chr3 (47-133)||(41724206-41724293)
chr3 (47-121)||(30923887-30923961)
chr3 (48-133)||(3015833-3015918)
chr3 (47-128)||(3044248-3044329)
chr3 (47-95)||(5396230-5396278)
chr3 (61-133)||(36646385-36646457)
chr3 (60-131)||(53952042-53952116)
chr3 (47-118)||(482781-482852)
chr3 (54-133)||(1816578-1816657)
chr3 (55-94)||(2128255-2128294)
chr3 (48-95)||(5391912-5391959)
chr3 (60-95)||(33883752-33883787)
chr3 (48-95)||(36101601-36101648)
chr3 (48-95)||(36139911-36139958)
chr3 (48-95)||(39723230-39723277)
chr3 (48-118)||(2152168-2152238)
chr3 (47-121)||(9279315-9279389)
chr3 (67-133)||(13709832-13709898)
chr3 (74-128)||(20502084-20502138)
chr3 (62-128)||(25453863-25453929)
chr3 (55-89)||(42545679-42545713)
chr3 (55-133)||(52618998-52619076)
chr3 (67-136)||(2719460-2719529)
chr3 (63-128)||(21367667-21367732)
chr3 (54-95)||(25925775-25925816)
chr3 (48-97)||(38318991-38319040)
chr3 (58-95)||(40321069-40321106)
chr3 (61-133)||(237392-237464)
chr3 (60-128)||(22214661-22214729)
chr3 (61-121)||(30573917-30573977)
chr3 (47-127)||(37273135-37273215)
chr3 (74-114)||(41155181-41155221)
chr3 (60-128)||(41644447-41644515)
chr3 (55-95)||(45432936-45432976)
[»] chr8 (46 HSPs)
chr8 (48-121)||(12851183-12851256)
chr8 (17-128)||(11569416-11569527)
chr8 (62-133)||(31705080-31705151)
chr8 (27-129)||(5069696-5069798)
chr8 (47-133)||(11415149-11415235)
chr8 (67-128)||(30277254-30277315)
chr8 (54-122)||(20672756-20672824)
chr8 (67-133)||(8062324-8062390)
chr8 (60-133)||(30389094-30389167)
chr8 (48-128)||(779051-779131)
chr8 (65-128)||(27028831-27028894)
chr8 (62-133)||(28769343-28769414)
chr8 (64-149)||(8060647-8060733)
chr8 (63-133)||(9956819-9956889)
chr8 (75-133)||(29973076-29973134)
chr8 (67-133)||(31862488-31862554)
chr8 (54-128)||(37353245-37353319)
chr8 (60-133)||(10075553-10075626)
chr8 (47-119)||(9540985-9541057)
chr8 (54-130)||(34290867-34290943)
chr8 (48-128)||(42215296-42215376)
chr8 (48-95)||(2594987-2595034)
chr8 (54-133)||(11795087-11795166)
chr8 (74-133)||(36338278-36338337)
chr8 (60-119)||(42215084-42215143)
chr8 (46-96)||(4281578-4281628)
chr8 (47-89)||(11185260-11185302)
chr8 (28-133)||(30987961-30988067)
chr8 (54-95)||(3161619-3161660)
chr8 (48-89)||(3254264-3254305)
chr8 (28-133)||(6509273-6509378)
chr8 (48-133)||(13459640-13459725)
chr8 (54-127)||(14905613-14905686)
chr8 (54-119)||(25869262-25869327)
chr8 (47-128)||(30191130-30191211)
chr8 (27-128)||(31875564-31875665)
chr8 (63-128)||(33714241-33714306)
chr8 (67-135)||(1433541-1433609)
chr8 (61-121)||(2458569-2458629)
chr8 (54-106)||(2492958-2493010)
chr8 (65-133)||(8062519-8062587)
chr8 (68-128)||(11183545-11183605)
chr8 (68-128)||(11745662-11745722)
chr8 (74-134)||(21130608-21130668)
chr8 (61-133)||(31804457-31804529)
chr8 (48-108)||(41606893-41606953)
[»] chr4 (36 HSPs)
chr4 (60-133)||(7694012-7694085)
chr4 (48-128)||(1137712-1137792)
chr4 (47-127)||(52746829-52746909)
chr4 (27-133)||(2996568-2996674)
chr4 (37-115)||(29467603-29467681)
chr4 (48-118)||(44249295-44249365)
chr4 (47-128)||(24929493-24929574)
chr4 (64-133)||(51630106-51630175)
chr4 (84-133)||(56480343-56480392)
chr4 (47-127)||(29263371-29263451)
chr4 (61-133)||(43824278-43824350)
chr4 (62-133)||(17884063-17884134)
chr4 (62-133)||(42866063-42866134)
chr4 (59-126)||(55084482-55084549)
chr4 (54-128)||(6978958-6979032)
chr4 (60-94)||(24747353-24747387)
chr4 (54-128)||(27721717-27721791)
chr4 (62-128)||(47800623-47800689)
chr4 (55-97)||(48719388-48719430)
chr4 (67-133)||(49219134-49219200)
chr4 (62-128)||(53673662-53673728)
chr4 (68-114)||(53792585-53792631)
chr4 (48-97)||(1312872-1312921)
chr4 (63-128)||(1706622-1706687)
chr4 (28-97)||(20935994-20936063)
chr4 (48-121)||(20936219-20936292)
chr4 (17-114)||(22236064-22236161)
chr4 (59-128)||(35064855-35064924)
chr4 (48-125)||(35958658-35958734)
chr4 (61-133)||(10192279-10192350)
chr4 (54-130)||(11264299-11264375)
chr4 (76-128)||(16199999-16200051)
chr4 (48-92)||(37864342-37864386)
chr4 (60-108)||(45732693-45732741)
chr4 (66-106)||(45738099-45738139)
chr4 (60-132)||(46415794-46415866)
[»] chr6 (34 HSPs)
chr6 (54-130)||(6647385-6647461)
chr6 (55-133)||(4247058-4247136)
chr6 (48-134)||(31624084-31624170)
chr6 (62-133)||(4006709-4006780)
chr6 (74-133)||(31671090-31671149)
chr6 (74-129)||(33911298-33911353)
chr6 (6-117)||(34939755-34939866)
chr6 (46-128)||(2112200-2112282)
chr6 (48-133)||(769134-769218)
chr6 (48-89)||(22743520-22743561)
chr6 (64-133)||(24782054-24782123)
chr6 (48-137)||(28641739-28641828)
chr6 (54-133)||(281844-281923)
chr6 (48-95)||(696635-696682)
chr6 (55-94)||(821833-821872)
chr6 (16-95)||(6963037-6963116)
chr6 (66-132)||(35070475-35070541)
chr6 (74-131)||(1497978-1498035)
chr6 (46-95)||(4420676-4420725)
chr6 (54-95)||(6536980-6537021)
chr6 (54-127)||(7446327-7446400)
chr6 (46-135)||(8010350-8010439)
chr6 (54-95)||(9027611-9027652)
chr6 (48-101)||(10616703-10616756)
chr6 (54-95)||(13908496-13908537)
chr6 (54-127)||(21024212-21024285)
chr6 (47-128)||(32386095-32386176)
chr6 (48-120)||(3528811-3528883)
chr6 (54-126)||(9323492-9323564)
chr6 (60-128)||(14492302-14492370)
chr6 (59-119)||(17241253-17241313)
chr6 (47-119)||(30523668-30523740)
chr6 (52-96)||(34404719-34404763)
chr6 (66-130)||(34430469-34430533)
[»] chr2 (39 HSPs)
chr2 (48-126)||(41817170-41817248)
chr2 (60-128)||(5759576-5759645)
chr2 (60-133)||(22681187-22681260)
chr2 (48-119)||(787341-787412)
chr2 (62-133)||(1625895-1625966)
chr2 (47-129)||(10567056-10567138)
chr2 (66-128)||(11488277-11488339)
chr2 (63-121)||(35379021-35379079)
chr2 (63-128)||(9174815-9174880)
chr2 (60-133)||(10198482-10198555)
chr2 (60-125)||(19333327-19333392)
chr2 (48-133)||(33941904-33941989)
chr2 (62-119)||(44443330-44443387)
chr2 (64-128)||(3235390-3235454)
chr2 (77-133)||(9477947-9478003)
chr2 (48-128)||(29316765-29316845)
chr2 (47-127)||(33525956-33526036)
chr2 (62-129)||(4026816-4026883)
chr2 (47-114)||(25790140-25790207)
chr2 (54-133)||(33942145-33942224)
chr2 (47-133)||(1742021-1742107)
chr2 (47-133)||(10563547-10563633)
chr2 (62-128)||(10884525-10884591)
chr2 (47-133)||(14666543-14666629)
chr2 (46-128)||(32821809-32821891)
chr2 (47-133)||(43141866-43141952)
chr2 (49-122)||(1939323-1939396)
chr2 (74-127)||(13630297-13630350)
chr2 (48-133)||(18179230-18179315)
chr2 (67-163)||(33192164-33192263)
chr2 (63-132)||(40682400-40682468)
chr2 (63-95)||(7928304-7928336)
chr2 (47-95)||(11063521-11063569)
chr2 (68-128)||(13736303-13736363)
chr2 (17-81)||(19977994-19978058)
chr2 (24-119)||(30552609-30552705)
chr2 (76-128)||(33319830-33319882)
chr2 (47-95)||(41809234-41809282)
chr2 (63-95)||(43511118-43511150)
[»] chr7 (28 HSPs)
chr7 (54-128)||(6552288-6552362)
chr7 (60-130)||(24363603-24363673)
chr7 (60-133)||(38010709-38010782)
chr7 (66-122)||(27378836-27378892)
chr7 (29-89)||(36598327-36598387)
chr7 (73-132)||(7521268-7521327)
chr7 (55-133)||(44151477-44151555)
chr7 (68-133)||(44821954-44822019)
chr7 (48-128)||(9038112-9038191)
chr7 (61-133)||(39907798-39907870)
chr7 (48-133)||(46082029-46082116)
chr7 (55-122)||(7244686-7244753)
chr7 (55-126)||(9423591-9423662)
chr7 (48-95)||(11048060-11048107)
chr7 (27-126)||(34754779-34754877)
chr7 (48-95)||(43219634-43219681)
chr7 (81-132)||(47427326-47427377)
chr7 (54-124)||(529379-529449)
chr7 (58-92)||(35007633-35007667)
chr7 (55-128)||(25130086-25130159)
chr7 (48-133)||(44615094-44615179)
chr7 (76-128)||(514767-514819)
chr7 (25-93)||(5276266-5276334)
chr7 (61-133)||(15075088-15075160)
chr7 (74-130)||(18962588-18962644)
chr7 (74-130)||(18965726-18965782)
chr7 (65-133)||(40688993-40689061)
chr7 (27-95)||(48157089-48157157)
[»] scaffold0608 (1 HSPs)
scaffold0608 (48-92)||(9627-9671)
[»] scaffold0003 (1 HSPs)
scaffold0003 (47-121)||(306333-306407)


Alignment Details
Target: chr1 (Bit Score: 349; Significance: 0; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 128 - 554
Target Start/End: Complemental strand, 37240805 - 37240377
Alignment:
Q  128 aacttaaacttatatgaaaatatcttgactttatttattttttgtagtaataagttaaacataaacacatatatgattcatacttatgctataaacgccc 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37240805 aacttaaacttatatgaaaatatcttgactttatttattttttgtagtaa-aagttaaacataaacacatatatgattcatacttatgctataaacgccc 37240707  T
Q  228 aattaagctatttatacaaacatggccagtcttagaaaaacaaatgaatatgtaaagattgagttactttccaagttttgaaaagccccggatcaaggga 327  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37240706 aattaagttatttatacaaacatggccagtcttagaaaaacaaatgaatatgtaaagattgagttactttccaagttttgaaaagccccggatcaaggga 37240607  T
Q  328 tataacaaactcaaactcattcttaattggtaattaaattgggaccccccacccaaagaaaaattaacatttctttttgccttactttttcttagatttg 427  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37240606 tataacaaactcaaactcattcttaattggtaattaaattgggaccccccacccaaagaaaaattaacatttctttttgccttactttttcttagatttg 37240507  T
Q  428 atctttcatgtcatttttat---nnnnnnnnnnnnnnnnntgcattcaaacccaagttttgctacagaataaaataagaaattgtacatagaaacaccaa 524  Q
    ||||||||||||||||||||                    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37240506 atctttcatgtcatttttataaataaaaaaaaaaaaaaaatgtattcaaacccaagttttgctacagaataaaataagaaattgtacatagaaacaccaa 37240407  T
Q  525 gaaaaatatctcaaaacccccatgttacct 554  Q
    ||||||||||||||||||||||||||||||    
T  37240406 gaaaaatatctcaaaacccccatgttacct 37240377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 37240958 - 37240828
Alignment:
Q  12 atgaacacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtt 111  Q
    |||||||||||| ||| | ||||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37240958 atgaacacttgcaaaattttttgaaaaagcttcaaaaaatatcttattacatgttcataagatgttatcagcttattttcataaaccctcaaggatagtt 37240859  T
Q  112 tatgaaaacagcttataacttaaacttatat 142  Q
    |||||||||||||||||||||||||||||||    
T  37240858 tatgaaaacagcttataacttaaacttatat 37240828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 30257756 - 30257685
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    |||| ||||||||||||| ||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaactta 30257685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 6292573 - 6292492
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataa 129  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||||| | ||| |  |||||||| ||||| |||||||||    
T  6292573 aaacagcttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttataa 6292492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 25479654 - 25479581
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| |||||||||| || |||||||||||||||||||||| | ||| ||||||| ||||||||||| ||||||    
T  25479654 ttatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttata 25479581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 10199404 - 10199477
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | ||| |  |||| ||||||||| |||||||    
T  10199404 cttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttat 10199477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 27140559 - 27140478
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| ||||| |||||| |||||| |||||||||||||||| ||||| | ||| | ||||| |||| |||||||||||||    
T  27140559 gaaacagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 31517742 - 31517815
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| |||||||||||||||||||||| | ||| | || || ||||||| |||||||||| ||||    
T  31517742 acatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagctta 31517815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 45975753 - 45975693
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctt 125  Q
    |||||||| |||||||||||||||||||||||  ||| | ||||| |||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagctt 45975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 4700082 - 4700141
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||||||||||||||| | ||| |||||||||||| ||||||| ||||| ||||    
T  4700082 tgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagctta 4700141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 14629970 - 14630041
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||| |||||||||||||||| ||||||  ||| | ||||| ||||||||| |||||||| ||||    
T  14629970 atgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatagctta 14630041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 24460403 - 24460470
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||| ||||||||||||| ||||| |||||||||||  ||| | ||||||||||| |||||||||||    
T  24460403 cttatgacatgttcataagctgtttccagcttatttttgtaagctctcaaggatagcttatgaaaaca 24460470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 30815643 - 30815690
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||    
T  30815643 aaacagcttatgacatgttcataaaatgttttcagcttattttcataa 30815690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 34290310 - 34290231
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||| |||||||| ||||||||||||||||||||||   ||  | ||||| |||||||||||||||||| ||||    
T  34290310 cttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagctta 34290231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 7136994 - 7137068
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||| |||||||| | ||||||||||||||||||||   ||| | ||||| ||||||||||||||||||    
T  7136994 cttatgacatattcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttata 7137068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 51695500 - 51695570
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||| | |||||||||||||||||||||  ||| | ||||| ||||||||||| || ||||||||    
T  51695500 tgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataactta 51695570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 7472380 - 7472311
Alignment:
Q  60 acatgttcataaga-tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||||| | |||||||||||||||||||||| | ||| | ||||| ||||| ||||||||||||    
T  7472380 acatgttcataaaactgttttcagcttattttcataagctctccaagatagcttatggaaacagcttata 7472311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 35925770 - 35925697
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||| ||||| ||||||||||||| |||||||| ||||||| ||||||| ||| | ||||| ||||| |||||    
T  35925770 aaacagcttatgacatgttcataagctgttttcaacttatttccataaactctccatgatagcttatggaaaca 35925697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 37593680 - 37593721
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  37593680 cttatgacatgttcataagctgttttcagcttattttcataa 37593721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 4482010 - 4481966
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttca 92  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  4482010 aaacaacttattacatgttcataagctgtttttagcttattttca 4481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 133
Target Start/End: Complemental strand, 4622172 - 4622088
Alignment:
Q  49 aacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||| |||||| |||||| |||||| |||||||||||| || | ||| | |||||  |||| |||||||||||| ||||    
T  4622172 aacatcttatgacatgtccataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagctta 4622088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 9656713 - 9656645
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| |||||| |||||||||||||||  | || ||||||| ||||||| |||||||||| ||||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagctta 9656645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 15558285 - 15558213
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    ||||| ||||||| ||||||||||||||||  ||||   ||| ||||||  ||||||||||||||||||||||    
T  15558285 acatgctcataagttgttttcagcttatttctataagttctctaggatatcttatgaaaacagcttataactt 15558213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 28689441 - 28689489
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||| ||||| |||||| |||||| ||||||||||||||||||||||    
T  28689441 gaaacagcttatgacatgtccataagttgttttcagcttattttcataa 28689489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 4699605 - 4699676
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    ||||| ||||| ||||||||||||| |||||| |||||||||  |||| | |||  ||||||||||||||||    
T  4699605 aaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaa 4699676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 5090916 - 5090857
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||||||||||||   |||  | ||||||||||||||||||||||| ||||    
T  5090916 tgttttcagcttattttcataagatctcgggtatagtttatgaaaacagcttatagctta 5090857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 7218070 - 7218149
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||| ||||| ||| |||||||| |||||||||||||   ||| ||||||| ||||||||||| |||||| ||||    
T  7218070 cttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaacttatagctta 7218149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 15361106 - 15361059
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatag 109  Q
    ||||||||||| |||||||||||||||||||||| | ||| |||||||    
T  15361106 atgttcataagttgttttcagcttattttcataagctctccaggatag 15361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Complemental strand, 15361767 - 15361708
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| || ||||||| |||||| |||  |||||||||||||||||| ||||    
T  15361767 tgttttcagcttaattccataaactctcaagaatatcttatgaaaacagcttatagctta 15361708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 31118123 - 31118076
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||||||||| |||||||||| || |||||||||||||||| |||||    
T  31118123 aaacatcttatgacatgttcatcagttgttttcagcttatttccataa 31118076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 128
Target Start/End: Original strand, 39347970 - 39348037
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||||| |||||||||||||||| ||||| |  |  ||||||||||||||||||| ||||||    
T  39347970 catgtccataagttgttttcagcttatttccataagctttgcaggatagtttatgaaaacaacttata 39348037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 1509961 - 1510003
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaa 96  Q
    ||||| |||||||||| || |||||||||||||||||||||||    
T  1509961 cttatgacatgttcattagctgttttcagcttattttcataaa 1510003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 2522683 - 2522629
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||| ||||||| ||||||  ||| || |||||||||||||||||||||||    
T  2522683 tgttttcaacttatttccataaattctccagaatagtttatgaaaacagcttata 2522629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 5886990 - 5887068
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    ||||| ||||||||||||| |||||||||||||||||| |||   ||| | ||| | ||||  ||||||||||||||||    
T  5886990 cttatgacatgttcataagttgttttcagcttattttcgtaagttctccaagatggcttatagaaacagcttataactt 5887068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 12641792 - 12641718
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    ||||||||| | | |||||| |||| |||||||| ||||||||||||| | ||| ||||||| |||| |||||||    
T  12641792 aaacatcttgtgatatgttcgtaagttgttttcatcttattttcataagcactctaggatagattataaaaacag 12641718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 15438044 - 15437970
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||| ||||| ||||||||||||| |  ||||||||||||| | ||||| ||| |||||||  ||||||||||    
T  15438044 gaaacaacttatgacatgttcataagttactttcagcttatttccgtaaactctcgaggatagcctatgaaaaca 15437970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 27820342 - 27820412
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||| | |||||||||||||||||||||  ||| | ||||| |||| |||||||| |||| ||||    
T  27820342 tgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagctta 27820412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 35351105 - 35351039
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| |||||||||||||||||  ||| | ||| ||||||||||||||| ||| ||||||    
T  35351105 atgtttataagttgttttcagcttatttttgtaagctctctaggatagtttatgaagacaacttata 35351039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 6102219 - 6102154
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||  |||||||||||||||| ||||||  |||   ||||| ||||||||||||||||||    
T  6102219 tgttcataaattgttttcagcttatttccataaattctcccagatagcttatgaaaacagcttata 6102154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 10809419 - 10809378
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||||| |||| |||||||||||||||||||||||    
T  10809419 cttatgacatgtttataatatgttttcagcttattttcataa 10809378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 10854813 - 10854740
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||| ||||| ||||||||| ||| |||||||||||||||||| ||| |  |  |||||||| ||||||||||    
T  10854813 aaacagcttatgacatgttcacaagctgttttcagcttattttcttaagctgttcaggatagtatatgaaaaca 10854740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 133
Target Start/End: Complemental strand, 25944484 - 25944427
Alignment:
Q  76 ttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||||||||||    || ||||||| |||||||||| ||||||||||||    
T  25944484 ttttcagcttattttcataattaatccaggatagcttatgaaaaccgcttataactta 25944427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 34179882 - 34179947
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||||||| ||||| |||||||  |  |||||||||||||||||||| ||||| ||||    
T  34179882 ataagttgttttcagcgtatttccataaacttttcaggatagtttatgaaaacagtttatagctta 34179947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 119
Target Start/End: Complemental strand, 35351354 - 35351281
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    |||||||||||||||||| |||||||   ||||| |||||||||| |||| | ||  ||||| |||||||||||    
T  35351354 agaaacatcttattacattttcataaacagtttttagcttatttttataagctctataggattgtttatgaaaa 35351281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 37842345 - 37842430
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| || |||||||||||||  |||||||||||||||| ||||   ||  | ||||| ||||||||||| |||||| ||||    
T  37842345 aaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagctta 37842430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 46252678 - 46252719
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||    
T  46252678 cttatgacatgttcataagttgttttcaggttattttcataa 46252719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 1565531 - 1565603
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||| |||||| |||||| |||||||||||||||||||| | | ||| |  |||| ||| ||||||||||||    
T  1565531 cttatgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatagattaagaaaacagctta 1565603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 10744381 - 10744301
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||||  |||||||||||| |||||||| |||||||| ||||   ||| | || || ||||||||||||||||||    
T  10744381 aaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttata 10744301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 11639406 - 11639486
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| |||||| |||||| |||||| ||||||||||||||| | ||| || |||  ||||| |||||| |||||    
T  11639406 aaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaacagtttata 11639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 12564877 - 12564949
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| |||||||||||||||| | ||| | || || ||||| ||||||||||| |||||| ||||    
T  12564877 catgtccataagctgttttcagcttatttccgtaagcactaaaagatagcttatgaaaacaacttatagctta 12564949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 27963336 - 27963444
Alignment:
Q  24 gaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagc 123  Q
    |||| |||||||||||||||  |  |||| ||||| |||||| |||||| |||||| |||||||||  |||| | ||| |  |||| ||||||||||| |    
T  27963336 gaaattgtttgagaaagcttatattaacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaac 27963435  T
Q  124 ttataactt 132  Q
    ||| |||||    
T  27963436 ttagaactt 27963444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 33723371 - 33723419
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||| || || |||||||||| ||||||||||||||||||| |||||    
T  33723371 gaaacagctcatgacatgttcatgagatgttttcagcttatttccataa 33723419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 38503470 - 38503502
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataa 95  Q
    |||||||||| ||||||||||||||||||||||    
T  38503470 tgttcataagttgttttcagcttattttcataa 38503502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 39270428 - 39270500
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| |||||||| ||||||||||||  | ||| | | ||| |||||||||||||||||| ||||    
T  39270428 catgtccataagctgttttcaacttattttcatatgctctctatggtagcttatgaaaacagcttatatctta 39270500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 41195189 - 41195257
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    ||||| |||| || ||||| | ||||||||||||||||||||   ||| | ||||||||||||||||||    
T  41195189 cttatgacattttaataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacag 41195257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 95
Target Start/End: Complemental strand, 47877182 - 47877142
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||| ||||| ||||||| ||||||||||||||||||||||    
T  47877182 ttatgacatgctcataagttgttttcagcttattttcataa 47877142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 51929783 - 51929847
Alignment:
Q  66 tcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    ||||||| || |||| |||||||| ||||| | ||| || |||| ||||||||||||||||||||    
T  51929783 tcataagctgatttcggcttatttccataagctctctagaatagcttatgaaaacagcttataac 51929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 41957440 - 41957526
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||| |||||| |||||||| |||||||||||||   ||||||||||| |||||||||||||||||||||||    
T  41957440 gaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttataactta 41957526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 17258879 - 17258952
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | ||  |||||||||||||||||||||||||    
T  17258879 cttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttat 17258952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 7985034 - 7984969
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||| |||||||||||||||||||||||  ||| | ||||| ||||||||| ||||||||    
T  7985034 tgttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttata 7984969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 4014429 - 4014493
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||||||| ||||||||||||||||||||||   ||| | ||||| |||||||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 10272419 - 10272506
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||| ||||| ||||||   |||| |||||||||||||||||||||||| ||| | ||| | ||||||||||| |||||| ||||    
T  10272419 agaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagctta 10272506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 11615568 - 11615501
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||||| |||||||||||||||| ||||| | |  |||||||  ||||||||||||||||||    
T  11615568 catgttcataagctgttttcagcttatttccataagctcataaggatatcttatgaaaacagcttata 11615501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 25461312 - 25461391
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||||||| || |||||||||||||||||||||||  | | | ||||| |||||||||||| ||||| ||||    
T  25461312 cttatgacatgttcattagctgttttcagcttattttcataaatacgccaagataggttatgaaaacagtttatagctta 25461391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 7674729 - 7674655
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||| ||||| ||||||| ||||| ||||||||||||||||||| |||  ||| | ||||| |||||||||||    
T  7674729 gaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaaca 7674655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 56 - 133
Target Start/End: Complemental strand, 8938718 - 8938641
Alignment:
Q  56 tattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||   |||| |||||| ||||||||||||||||| |||  | | ||||||||||||| ||||||||||||    
T  8938718 tattacatgtctgtaagttgtttttagcttattttcataaactctcctgcaaagtttatgaaaactgcttataactta 8938641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 11707128 - 11707055
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| ||||||| ||||| ||||||||||||||||||| || | ||  | ||||| ||||||||||||||||||    
T  11707128 ttatgacatgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaacagcttata 11707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 36318854 - 36318769
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||||||| ||  |||| |||||||||||||||| ||||||  ||| | ||||| ||||||||||| |||| ||||||    
T  36318854 aaacaacttattacatcttgttaagctgttttcagcttatttacataaattctccaagatagcttatgaaaacaacttaaaactta 36318769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 125
Target Start/End: Complemental strand, 36638815 - 36638750
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctt 125  Q
    ||||||||||||| | |||||||||||||| ||||| | ||| ||||||  |||||||||||||||    
T  36638815 acatgttcataagcttttttcagcttatttccataagctctctaggataacttatgaaaacagctt 36638750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 12595675 - 12595747
Alignment:
Q  17 cacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattt 89  Q
    |||||| || ||| ||||||| ||||| | |||||| |||||| ||||||||||||  |||||||||||||||    
T  12595675 cacttgtgagactatttgagagagcttaaggaaacagcttattgcatgttcataagccgttttcagcttattt 12595747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 16889795 - 16889735
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||||||| |||||| ||||||| ||| || |||| ||||||||||||||||||    
T  16889795 ataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttata 16889735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 17368756 - 17368676
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| ||||||||||| |  ||||||||||||||| ||||| | ||| | ||||| ||||||||||| ||||||    
T  17368756 aaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttata 17368676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 163
Target Start/End: Original strand, 32194075 - 32194180
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaaacttatatgaaaatatctt 153  Q
    ||||| |||| | |||||| ||||||||||||||||  |||| | ||||| ||||| |||  |||||| |||||| ||||    |||||||||| |||||    
T  32194075 cttatgacatttccataagttgttttcagcttatttatataagctctcaaagatagcttaaaaaaacatcttatagctta----tatatgaaaacatctt 32194170  T
Q  154 gactttattt 163  Q
    ||||||||||    
T  32194171 gactttattt 32194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 1019475 - 1019530
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    |||||| |||||||| ||||||||||| ||| |||||||| |||||| ||||||||    
T  1019475 cataagttgttttcatcttattttcattaactctcaaggagagtttacgaaaacag 1019530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 3237156 - 3237093
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||| ||| |||||| ||||||||||| | ||  ||||||| ||||||||||||||||||    
T  3237156 ttcataagttgtgttcagcatattttcataagctctttaggatagcttatgaaaacagcttata 3237093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 10125708 - 10125755
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||||||||||    
T  10125708 aaacaacttatgacatgttgataaggtgttttcagcttattttcataa 10125755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 18543193 - 18543271
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| ||| || |||||||||||||||| ||||| | ||| ||||||| ||||||||||| |||||| ||||    
T  18543193 cttatgacatgtccatgagttgttttcagcttattt-cataagctctccaggatagcttatgaaaacaacttatatctta 18543271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 2092534 - 2092608
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||| |||||  ||||| |||||| |||||||| ||| ||||||||||||||  | ||||||| |||||||||    
T  2092534 gaaacaacttatggcatgtccataagttgttttcaactttttttcataaacccttcaagatagttaatgaaaaca 2092608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 11700367 - 11700417
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaac 97  Q
    |||||| ||||| |||||| |||||| ||||||||| ||||||||||||||    
T  11700367 gaaacaacttatgacatgtccataagctgttttcagattattttcataaac 11700417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 49 - 95
Target Start/End: Complemental strand, 12467212 - 12467166
Alignment:
Q  49 aacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||| ||||| ||||||| ||||| ||||||||||||||||||||||    
T  12467212 aacaacttatgacatgtttataagctgttttcagcttattttcataa 12467166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 28413288 - 28413354
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||||| |||||||||||||||| ||||||| ||| | ||||  ||||||| ||||| ||||    
T  28413288 atgttcataagctgttttcagcttatttccataaactctccaagataacttatgaacacagcgtata 28413354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 31694629 - 31694551
Alignment:
Q  17 cacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||| ||||||||||| |||  |||  ||||||| ||||| || ||| |||||| |||||||| |||||||||||||    
T  31694629 cacttgtgaaactgtttgtgaatacttgtagaaacagcttatcacttgtccataagttgttttcaacttattttcataa 31694551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 126
Target Start/End: Original strand, 40205064 - 40205142
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||| ||||| |||||| |||||  ||||||||||||||||  |||| | ||| ||||||| ||||||||||| ||||    
T  40205064 aaacagcttataacatgtccataatctgttttcagcttatttctataagctctccaggatagcttatgaaaacaactta 40205142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 2568738 - 2568653
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||| |||| |||||||| | |||| ||||||||||||| | | ||| | ||||| ||||||||||| |||||| ||||    
T  2568738 aaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagctta 2568653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 37611217 - 37611278
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||||||||||| ||||||||| |||||| ||||| | ||| | ||||| |||||||||||    
T  37611217 acatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 37787947 - 37788008
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||||||||||| ||||||||| |||||| ||||| | ||| | ||||| |||||||||||    
T  37787947 acatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 40731521 - 40731476
Alignment:
Q  76 ttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||||| ||||||||||| | ||||||||||| |||||||||||    
T  40731521 ttttcagcatattttcataagctctcaaggatagcttatgaaaaca 40731476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 1899234 - 1899186
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaa 96  Q
    ||||| ||||| |||||| |||||| |||||||||||||||| ||||||    
T  1899234 aaacagcttatgacatgtgcataagttgttttcagcttatttccataaa 1899186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 7907944 - 7907876
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| ||||||||||||| |||||||| | ||| | || || |||| |||||| |||||||||||    
T  7907944 ttcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataactta 7907876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 8481270 - 8481218
Alignment:
Q  76 ttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| ||||||||| ||||| ||||||| ||||  ||||||||||||||||||    
T  8481270 tttttagcttatttccataagccctcaaagataacttatgaaaacagcttata 8481218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 10771890 - 10771958
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||| |||||  || |||||||||||||||||||| |||  |||||| |||||||| || ||||||    
T  10771890 acatgttgataagccgtgttcagcttattttcataaactctctcggatagcttatgaaagcaacttata 10771958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 1217789 - 1217875
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||| |||||| |||||||| |||| ||||||||   ||||||||||| |||||||||||||||||||||||    
T  1217789 gaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttataactta 1217875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 53736085 - 53736190
Alignment:
Q  23 cgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    ||||||||||| ||| ||||||  |||||  | ||||||||||||||||| || ||||||||||||||||||||| ||  || |||| |||||||||||     
T  53736085 cgaaactgtttaagagagcttctggaaaccgcgtattacatgttcataagttgctttcagcttattttcataaacacttcagtataggttatgaaaacaa 53736184  T
Q  123 cttata 128  Q
    ||||||    
T  53736185 cttata 53736190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 39602206 - 39602285
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||||||||||  |||||||| |||||||||||||   ||||| ||||| |||||||||||||||||||||||    
T  39602206 cttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataactta 39602285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 43115137 - 43115051
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||| |||||  |||||||||||||||| ||||| | ||||| ||||||| ||||||||| |||||| ||||    
T  43115137 gaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaaacaacttatagctta 43115051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 40665497 - 40665424
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| ||||||||||||||||| |||| | ||| | ||||  ||||||||||| |||||||||||    
T  40665497 acatgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataactta 40665424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 20669240 - 20669172
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||||||| ||||||| |||||||| ||||| | ||| | ||||| ||||||||||||||||||    
T  20669240 acatgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 28622006 - 28622074
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| ||||||||| ||||||||||||   ||| | |||||||||||||||||||||||| ||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagctta 28622074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 31010501 - 31010405
Alignment:
Q  29 tgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctt 125  Q
    |||||| ||||||||  ||||||| ||||| |||||| |||||| ||||||||||||| || ||||| | ||| | ||||| ||| |||||||||||    
T  31010501 tgtttgtgaaagcttatagaaacaacttatgacatgtccataagctgttttcagcttaattccataagctctctatgataggttacgaaaacagctt 31010405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 119
Target Start/End: Original strand, 34414793 - 34414845
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    |||||| |||||||||||||||||||||||| ||| | |||||||||||||||    
T  34414793 cataagttgttttcagcttattttcataaactctccatgatagtttatgaaaa 34414845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 24785279 - 24785212
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||| ||||||||||||| |||||| ||||||||| ||||| | ||| ||||||| |||||||||||    
T  24785279 cttatgacatgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaaca 24785212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 95
Target Start/End: Complemental strand, 36887572 - 36887537
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataa 95  Q
    ||||||||||||||||||||||||||||||||||||    
T  36887572 acatgttcataagatgttttcagcttattttcataa 36887537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 41724293 - 41724206
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttatttt-cataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||| |||||| |||||||||||||||||  |||| | ||||||||||| | |||||||||| ||||| ||||    
T  41724293 gaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagctta 41724206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 30923887 - 30923961
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||| ||||| ||||||  ||||| ||||||||||||||||  |||||| ||| ||||||| |||||||||||    
T  30923887 gaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 3015833 - 3015918
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||| |||||| ||||||||||||||| |||||||| |||| | |||| |  ||| || ||||||||||||||| ||||    
T  3015833 aaacaacttatgacatgtccataagatgttttcatcttattttaataagctctcatgattagcttttgaaaacagcttatacctta 3015918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 3044248 - 3044329
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| ||||| ||||||||||||| |||||||| ||||||||||||| | ||| ||| |||  || |||||||| |||||    
T  3044248 gaaacaacttatgacatgttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttata 3044329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 5396278 - 5396230
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||| ||||| ||||||| ||||| ||||||||||||||||||||||    
T  5396278 gaaacagcttatgacatgttaataaggtgttttcagcttattttcataa 5396230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 36646385 - 36646457
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| |||||||| |||||||  |||||| ||| ||||||| |||||||||||  ||||||||||    
T  36646385 catgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagttataactta 36646457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 53952116 - 53952042
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctc---aaggatagtttatgaaaacagcttataact 131  Q
    |||||||||| || |||||||||||||||||||||||| |||    |  |||||||||||||||| |||||||||    
T  53952116 acatgttcatgagctgttttcagcttattttcataaactctcggttattatagtttatgaaaacaacttataact 53952042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 482781 - 482852
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaa 118  Q
    |||||| ||||| ||||| ||||| ||| |||||||||||||| ||||||| ||  | ||||||||||||||    
T  482781 gaaacaacttataacatgctcatatgatattttcagcttatttccataaactcttcaagatagtttatgaaa 482852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 1816657 - 1816578
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||| |||||| | ||||||||||||||||| |||| | ||| || |||| ||||||||||| |||||| ||||    
T  1816657 cttatgacattttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatctta 1816578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 2128255 - 2128294
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcata 94  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  2128255 ttataacatgttcataagctgttttcagcttattttcata 2128294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 5391959 - 5391912
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||||||| |||||||| |||||||||||||    
T  5391959 aaacagcttatgacatgttcataagctgttttcaacttattttcataa 5391912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 95
Target Start/End: Original strand, 33883752 - 33883787
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataa 95  Q
    ||||||||||||| ||||||||||||||||||||||    
T  33883752 acatgttcataagttgttttcagcttattttcataa 33883787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 36101648 - 36101601
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||| ||| ||||||||||||||||||||||    
T  36101648 aaacagcttatgacatgttcacaagctgttttcagcttattttcataa 36101601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 36139958 - 36139911
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||| ||| ||||||||||||||||||||||    
T  36139958 aaacagcttatgacatgttcacaagctgttttcagcttattttcataa 36139911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 39723230 - 39723277
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  39723230 aaacagcttatgacatgttcataagctgttttcagcttattctcataa 39723277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 2152168 - 2152238
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaa 118  Q
    ||||| ||||| |||||||| |||| |||||||| ||| |||  |||| | ||||||||||||||||||||    
T  2152168 aaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 9279315 - 9279389
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||| ||||| ||||||  ||||| |||||||||||||||| | ||||| ||  | |||||||||||||||||    
T  9279315 gaaacagcttataacatgtatataagctgttttcagcttatttccttaaactcttcatgatagtttatgaaaaca 9279389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 13709832 - 13709898
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||||||| ||||||  |||||| ||| ||||||| |||||||||||| ||||| ||||    
T  13709832 cataagttgttttcagtttatttcaataaactctccaggatagcttatgaaaacagattatacctta 13709898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 20502084 - 20502138
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||||||||| |||||| | ||  ||||||| ||||||||||||||||||    
T  20502084 tgttttcagcttattctcataagctcttcaggatagcttatgaaaacagcttata 20502138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 25453863 - 25453929
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||| ||| | |||||||||||||||||||| |  || ||||||||||||||||| || |||||    
T  25453863 atgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaataggttata 25453929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 89
Target Start/End: Complemental strand, 42545713 - 42545679
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattt 89  Q
    |||||||||||||||||| ||||||||||||||||    
T  42545713 ttattacatgttcataagctgttttcagcttattt 42545679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 133
Target Start/End: Complemental strand, 52619076 - 52618998
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| ||||||||||||| | |||||| |||||||||| || | ||  | ||||| || ||||||||||||||||||||    
T  52619076 ttatgacatgttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataactta 52618998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 2719529 - 2719460
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaaac 136  Q
    |||||| |||| |||||||||||||||||   ||| | ||||| |||||||||||| ||||| |||||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttatagcttaaac 2719460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 21367732 - 21367667
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| ||| ||||||||||||||||||||||   ||| | ||||| ||||||||||| ||||||    
T  21367732 tgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 25925816 - 25925775
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||||||||||| |||||||| |||||||||||||    
T  25925816 cttatgacatgttcataagctgttttcaacttattttcataa 25925775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 38319040 - 38318991
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaac 97  Q
    ||||| ||||| ||||||||||||| | |||||||||||||| |||||||    
T  38319040 aaacaacttataacatgttcataagctattttcagcttatttccataaac 38318991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 40321069 - 40321106
Alignment:
Q  58 ttacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||||| |||||| ||||||||||||||||||||||    
T  40321069 ttacatgtgcataagttgttttcagcttattttcataa 40321106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 237464 - 237392
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| |||||||||||||||| | ||| | ||  ||||||  ||||||||||| |||||||||||    
T  237464 catgtccataagctgttttcagcttatttccgtaagctctataggataacttatgaaaacaacttataactta 237392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 22214661 - 22214729
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| |||||| |||||||||||||||| | |||   ||| ||||||| ||||||||||| ||||||    
T  22214661 acatgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttata 22214729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 30573917 - 30573977
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||||||||| |||||||||||||| ||||| | | ||| | ||||| |||||||||||    
T  30573917 catgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaaca 30573977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 37273215 - 37273135
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||| ||||| |||||| |||||| |||||||| ||||||| |||||   ||| | ||||| |||||||||||| ||||    
T  37273215 gaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 114
Target Start/End: Complemental strand, 41155221 - 41155181
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttat 114  Q
    |||||||| ||||||||||||||| ||||||||||| ||||    
T  41155221 tgttttcaacttattttcataaactctcaaggatagcttat 41155181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 41644447 - 41644515
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| |||||||| |||||||||||||||| | |||   ||| | ||||| ||||||||||||||||||    
T  41644447 acattttcataagctgttttcagcttatttccttaagatctctacgatagcttatgaaaacagcttata 41644515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 55 - 95
Target Start/End: Original strand, 45432936 - 45432976
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||| ||||||||||||| |||||||||||||||| |||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataa 45432976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 6e-17; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 48 - 121
Target Start/End: Complemental strand, 12851256 - 12851183
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||| | |||||||| || |||||||||||    
T  12851256 aaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaaca 12851183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 17 - 128
Target Start/End: Original strand, 11569416 - 11569527
Alignment:
Q  17 cacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatga 116  Q
    |||||| || ||||||| ||| |||||   |||||| ||||| |||||| |||||| ||||||||||||||||||| || | ||| | ||||| ||||||    
T  11569416 cacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatga 11569515  T
Q  117 aaacagcttata 128  Q
    ||||||||||||    
T  11569516 aaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 31705151 - 31705080
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| |||||| |||||||||||||||| ||||||| |||||||| || |||||||||||||||||| ||||    
T  31705151 atgtgcataagctgttttcagcttatttccataaactctcaaggacagcttatgaaaacagcttatagctta 31705080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 5069798 - 5069696
Alignment:
Q  27 actgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||||||||| |||||   |||||||||||| |||||||||||||   |||||||||||||||||||| |  || | ||||  ||||||||||||||||    
T  5069798 actgtttgagagagcttatggaaacatcttataacatgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaacagctta 5069699  T
Q  127 taa 129  Q
    |||    
T  5069698 taa 5069696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 11415235 - 11415149
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||| |||||| | || |||||||||||||| |||| ||| ||||||| ||||||||||||| |||||||||    
T  11415235 gaaacagcttataacatgtccataagctattctcagcttattttcacaaactctctaggatagcttatgaaaacagcgtataactta 11415149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 30277254 - 30277315
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| |||||||||||||||| ||||||| ||| ||||||| ||||||||||||||||||    
T  30277254 cataagttgttttcagcttatttccataaactctctaggatagcttatgaaaacagcttata 30277315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 20672824 - 20672756
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | ||| ||||||| |||| |||||||    
T  20672824 cttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacag 20672756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 8062390 - 8062324
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||||||||||||| ||||| | ||| | ||||| |||||||||||||||||| ||||    
T  8062390 cataagatgttttcagcttatttccataatctctctaagatagcttatgaaaacagcttatagctta 8062324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 30389167 - 30389094
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| ||||||||||||||||||||||   ||| |||| || ||||||||||||| |||| ||||    
T  30389167 acatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagctta 30389094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 779051 - 779131
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| ||||||||||||| |||||||| ||||||||  || || ||| | |||||||||||||||||| |||||    
T  779051 aaacaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaacagtttata 779131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 65 - 128
Target Start/End: Complemental strand, 27028894 - 27028831
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||| | |||||||||||||||||||| | ||| | ||||| ||||||||||||||||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttata 27028831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 133
Target Start/End: Original strand, 28769343 - 28769414
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| |||||| |||||||||||||||| ||||||| ||| |  |||| |||||||||||||||||| ||||    
T  28769343 atgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagctta 28769414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 8060733 - 8060647
Alignment:
Q  64 gttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta-aacttatatgaaaata 149  Q
    ||||||||| | |||||||||||||| ||||| | ||| ||||| | ||||||||||||||||||| ||| ||||| ||| ||||||    
T  8060733 gttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaacagcttataagttataacttgtataaaaata 8060647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 133
Target Start/End: Original strand, 9956819 - 9956889
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||  |||||||||||||||||||||   ||| | ||||| ||||||||||| |||||||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttataactta 9956889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 75 - 133
Target Start/End: Complemental strand, 29973134 - 29973076
Alignment:
Q  75 gttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| |||||| ||||||| ||||||||||| ||||||||||| |||||| ||||    
T  29973134 gttttcagtttatttccataaactctcaaggatagcttatgaaaacaacttatagctta 29973076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 31862554 - 31862488
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| |||||||||||||||||||||| | ||| ||||||  ||||||||||| |||||| ||||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagctta 31862488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 37353245 - 37353319
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||| |||||||  ||||||||| |||||||||||| | ||||| ||||| ||| ||||||||||||||    
T  37353245 cttatgacatattcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttata 37353319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 10075553 - 10075626
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||| | ||| || ||| ||||||||||||||| | ||| ||||||| ||||||||| |||||||||||||    
T  10075553 acatgttgacaagctgcttttagcttattttcataagctctctaggatagcttatgaaaatagcttataactta 10075626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 9540985 - 9541057
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    |||||||||||| |||||| |||||  ||| ||||||||||||||| || | ||| ||||||| |||||||||    
T  9540985 gaaacatcttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaa 9541057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 34290943 - 34290867
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    |||||||||||| ||||||   |||||||||||||||||| ||| ||| ||||||| |||  |||||| ||||||||    
T  34290943 cttattacatgtccataagcctttttcagcttattttcattaactctccaggatagattagaaaaacaacttataac 34290867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 42215296 - 42215376
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| || |||||||||| |||||||||||||||| ||||| | ||| |||||||  |||||||| || |||||    
T  42215296 aaacagcttatgacttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttata 42215376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 2594987 - 2595034
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  2594987 aaacaacttatgacatgttcataagttgttttcagcttattctcataa 2595034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 11795166 - 11795087
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| |||||  |||||||||||||||| ||||| | ||| |  |||| |||||||| ||||||||||||||    
T  11795166 cttatgacatgtccataacctgttttcagcttatttccataagctctccataatagcttatgaaatcagcttataactta 11795087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 36338278 - 36338337
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||||||||||||   ||||| |||| ||||| ||||||||||||| ||||    
T  36338278 tgttttcagcttattttcataagttctcaaagatattttataaaaacagcttatatctta 36338337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 42215084 - 42215143
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    ||||||||||||| |||||||||||||||| ||||| | ||| | ||||| |||||||||    
T  42215084 acatgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 4281628 - 4281578
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataaa 96  Q
    ||||||| | ||| ||||||||||||| |||||||| ||||||||||||||    
T  4281628 agaaacaacatatgacatgttcataagttgttttcatcttattttcataaa 4281578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 11185302 - 11185260
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattt 89  Q
    |||||||||||| ||||||||||||| |||||||| |||||||    
T  11185302 gaaacatcttataacatgttcataagttgttttcaacttattt 11185260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 30987961 - 30988067
Alignment:
Q  28 ctgtttgagaaagcttcaagaaacatcttattacatgttcataagatgtttt-cagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    |||||||||| |||||   |||||| ||||| |||||| |||||| | |||| ||| ||| || ||||| ||||||| ||||| |||  |||||||||||    
T  30987961 ctgtttgagagagcttatggaaacaacttatgacatgtccataagctatttttcagtttagttccataagccctcaaagatagcttacaaaaacagctta 30988060  T
Q  127 taactta 133  Q
    |||||||    
T  30988061 taactta 30988067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Original strand, 3161619 - 3161660
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| |||||||||||| |||||||||||||||||| ||||    
T  3161619 cttatgacatgttcataaaatgttttcagcttatttttataa 3161660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 3254305 - 3254264
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattt 89  Q
    ||||| ||||| ||||||||||||| ||||||||||||||||    
T  3254305 aaacagcttatgacatgttcataagctgttttcagcttattt 3254264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 6509273 - 6509378
Alignment:
Q  28 ctgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||||||| |||||  ||||||| ||||| |||||   ||||  | |||||| |||||||  |||| | ||| ||||||| |||||||||||||||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttat 6509372  T
Q  128 aactta 133  Q
    | ||||    
T  6509373 agctta 6509378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 13459725 - 13459640
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||| |||| |||||||  |||||||||| ||||||||||| | ||  |||||  |||||||||||| |||||| ||||    
T  13459725 aaacagcttatgacattttcataaactgttttcagcctattttcataagctctgtaggatgatttatgaaaacaacttatagctta 13459640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 14905686 - 14905613
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    ||||| ||||||| ||||||||||| |||||| ||||||||||  ||| | ||||| | |||||||||| ||||    
T  14905686 cttatgacatgtttataagatgtttacagcttgttttcataaattctccaagatagctaatgaaaacagtttat 14905613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 119
Target Start/End: Original strand, 25869262 - 25869327
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    ||||| |||||| |||||| |||||||||||||||| ||||||| ||| | |||||  ||||||||    
T  25869262 cttatgacatgtccataagttgttttcagcttatttccataaactctccatgatagcctatgaaaa 25869327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 30191130 - 30191211
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| ||||| ||||||||| ||  |||||||||||||||| |||||||  |  ||||||| |||| |||| ||||||||    
T  30191130 gaaacaacttatgacatgttcaaaacttgttttcagcttatttccataaacatttcaggatagcttatcaaaatagcttata 30191211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 128
Target Start/End: Original strand, 31875564 - 31875665
Alignment:
Q  27 actgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    |||||||||||||||||   |||||| ||||| |||||| ||||||   |||||| ||||||||||||| | ||  | |||||||||   ||||||||||    
T  31875564 actgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataagctcttgaagatagtttaaagaaacagctta 31875663  T
Q  127 ta 128  Q
    ||    
T  31875664 ta 31875665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 33714241 - 33714306
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||| ||||||||||||||||| |||| | |||   ||||| ||||||||| ||||||||    
T  33714241 tgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaatagcttata 33714306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 67 - 135
Target Start/End: Complemental strand, 1433609 - 1433541
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaaa 135  Q
    |||| ||| |||||| ||||||||||||| | ||| ||||||| |||||||||| ||||| | ||||||    
T  1433609 cataggatattttcaacttattttcataagctctccaggatagcttatgaaaactgcttaaagcttaaa 1433541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 2458569 - 2458629
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||||||||| ||||||||| |||||| ||||| | ||| ||||||| ||||| |||||    
T  2458569 catgttcataagctgttttcagtttatttccataagctctctaggatagcttatgtaaaca 2458629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 2493010 - 2492958
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaagga 106  Q
    ||||| ||||||||||||| ||||||  |||||||| ||||||||||| ||||    
T  2493010 cttataacatgttcataagttgttttttgcttatttccataaaccctccagga 2492958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 8062587 - 8062519
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| | ||| |||||||||||||||||| ||| | ||||| |||||| |||| |||||| ||||    
T  8062587 ttcataagctatttccagcttattttcataaactctctaagatagcttatgagaacatcttatagctta 8062519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 11183605 - 11183545
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||||||||||||||| ||||| | ||| ||| ||| || |||||||||||||||    
T  11183605 ataagctgttttcagcttatttccataagctctccagggtagcttgtgaaaacagcttata 11183545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 11745662 - 11745722
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||||||||||| |||||||| | | | ||||||| |||| |||||||||||||    
T  11745662 ataagttgttttcagcttagtttcataagctcactaggatagcttataaaaacagcttata 11745722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 134
Target Start/End: Complemental strand, 21130668 - 21130608
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaa 134  Q
    |||||| ||||||||| ||||| | ||||| |||||||||||| |||| |||||| |||||    
T  21130668 tgttttgagcttatttccataagctctcaatgatagtttatgagaacaacttatatcttaa 21130608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 31804457 - 31804529
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| || || ||||||||||||  |||||||| | ||||| ||||| | |||||||| ||||||||||||    
T  31804457 catgtttatgagttgttttcagcttcctttcataagctctcaaagatagctcatgaaaactgcttataactta 31804529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 41606893 - 41606953
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggata 108  Q
    ||||| ||||| ||||||||| ||| |||||||||||||||| ||||| | ||| ||||||    
T  41606893 aaacagcttatgacatgttcaaaagttgttttcagcttatttccataagctctctaggata 41606953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 7694012 - 7694085
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| |||||||||||||||| ||||||| ||| ||||||  |||||||||||||||||| ||||    
T  7694012 acatgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagctta 7694085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 1137792 - 1137712
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| ||||| | |||  ||||||||||||||| |||||||||    
T  1137792 aaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaagcagcttata 1137712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 52746829 - 52746909
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||| ||||  ||||||||||||| ||||||||||| |||||||||| || |  | ||||| |||||||||||||||||    
T  52746829 gaaacagcttaagacatgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttat 52746909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 133
Target Start/End: Complemental strand, 2996674 - 2996568
Alignment:
Q  27 actgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||||||||| |||||    ||||| ||||| |||||| |||||| | |||||| ||||||||||||  | ||| | ||||| ||||||||||| ||||    
T  2996674 actgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaactta 2996575  T
Q  127 taactta 133  Q
    |||||||    
T  2996574 taactta 2996568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 115
Target Start/End: Original strand, 29467603 - 29467681
Alignment:
Q  37 aaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatg 115  Q
    |||||||  ||||||  ||||| |||||| |||||| |||||||||||||||| ||||||| ||| |||||||| ||||    
T  29467603 aaagcttatagaaacggcttatgacatgtccataagctgttttcagcttatttccataaactctctaggatagtgtatg 29467681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 48 - 118
Target Start/End: Complemental strand, 44249365 - 44249295
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaa 118  Q
    ||||| ||||| ||||||| ||||| | | |||||||||||||||||||| ||| | ||||||||||||||    
T  44249365 aaacagcttatgacatgttgataagttttcttcagcttattttcataaactctccaagatagtttatgaaa 44249295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 24929574 - 24929493
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| |||||  |||||||||||  |||||||||||||||| ||||| | ||| || | |||||||||||||| ||||||    
T  24929574 gaaacagcttatggcatgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttata 24929493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 51630175 - 51630106
Alignment:
Q  64 gttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| ||||||||||||||||||||||||||||  ||  | ||||| ||||||||| |||||||| ||||    
T  51630175 gttcgtaagatgttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagctta 51630106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 56480392 - 56480343
Alignment:
Q  84 ttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||||| | ||| | |||||||||||||||||||||||||||||    
T  56480392 ttattttcataagctctccaagatagtttatgaaaacagcttataactta 56480343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 29263451 - 29263371
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||| ||||| | ||||||||||| |||||||||||||||| || || | ||  ||||||| ||||||||||| |||||    
T  29263451 gaaacagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttat 29263371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 43824350 - 43824278
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||||| |||||||||||||||| ||||| |  || ||||||  ||| ||||| |||||||||||||    
T  43824350 catgttcataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttataactta 43824278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 17884134 - 17884063
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||| ||||||||||| |||||||||| | ||| |  |||| ||||||||||| || ||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataactta 17884063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 42866134 - 42866063
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| ||||||||| ||| |||||| || ||||| | ||||||||||| ||||||||||| |||||| ||||    
T  42866134 atgtccataagatgcttttagcttacttccataagctctcaaggatagcttatgaaaacaacttatagctta 42866063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 55084482 - 55084549
Alignment:
Q  59 tacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    |||||||||||||| || ||||||||||||||||||| | ||| | ||||| | ||||||||| ||||    
T  55084482 tacatgttcataagctggtttcagcttattttcataagctctctaagatagctcatgaaaacaactta 55084549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 6978958 - 6979032
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||||  ||||| |||||||||||||||||||||||| ||  ||||| | |||| |||||| ||||||    
T  6978958 cttatgacatgtctataagctgttttcagcttattttcataaactctttaggatggcttataaaaacaacttata 6979032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 94
Target Start/End: Complemental strand, 24747387 - 24747353
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcata 94  Q
    ||||||||||||| |||||||||||||||||||||    
T  24747387 acatgttcataagttgttttcagcttattttcata 24747353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 128
Target Start/End: Complemental strand, 27721791 - 27721717
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||| | |||||| ||||||||||||||||||  || | ||| ||||||  ||||||||||||||||||    
T  27721791 cttatgacatatccataagctgttttcagcttattttcgcaagctctccaggataacttatgaaaacagcttata 27721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 47800689 - 47800623
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||||  ||||||||||||||||||||| | ||  | ||||| ||||||||||||||||||    
T  47800689 atgtttataagcggttttcagcttattttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 97
Target Start/End: Original strand, 48719388 - 48719430
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaac 97  Q
    |||| |||||||| |||| ||||||||||||||||||||||||    
T  48719388 ttatgacatgttcgtaagctgttttcagcttattttcataaac 48719430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 49219200 - 49219134
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| |||||||||||||||| ||||| | ||  | ||||||||||||||||| |||||| ||||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagctta 49219134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 53673662 - 53673728
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| |||||| |||||||||||||||| ||||| | ||| | ||||| |||||||||||| |||||    
T  53673662 atgtccataagttgttttcagcttatttacataagctctccaagatagcttatgaaaacagtttata 53673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 53792631 - 53792585
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttat 114  Q
    ||||| |||||||||||||||||||||||| ||| | ||||||||||    
T  53792631 ataagttgttttcagcttattttcataaactctccaagatagtttat 53792585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 1312921 - 1312872
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaac 97  Q
    ||||| |||||||||| |||||||  |||||||||||||||| |||||||    
T  1312921 aaacaacttattacatattcataaactgttttcagcttatttccataaac 1312872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 1706687 - 1706622
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||| | ||| || ||||||||||||| |  || | ||||||||||||||||||||||||    
T  1706687 tgttcataagctatttccaacttattttcataagctgtccaagatagtttatgaaaacagcttata 1706622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 97
Target Start/End: Original strand, 20935994 - 20936063
Alignment:
Q  28 ctgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaac 97  Q
    ||||||||||||||||  ||||| | ||| | |||||||  |||| ||||||||||||||| ||||||||    
T  20935994 ctgtttgagaaagcttatagaaataacttgtaacatgtttgtaagttgttttcagcttattctcataaac 20936063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 20936219 - 20936292
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    ||||| ||||| | ||||||||||| |||||||| ||||||| ||||| | ||| |||||||  ||||||||||    
T  20936219 aaacaacttatgatatgttcataagctgttttcaccttatttccataatctctccaggatagaatatgaaaaca 20936292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 22236064 - 22236161
Alignment:
Q  17 cacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttat 114  Q
    |||||||||||||||||| || ||| |    ||||| ||| | |||||||||| || ||||||| |||||||||||||| | ||| ||| ||||||||    
T  22236064 cacttgcgaaactgtttgggagagcctattaaaacagcttgtgacatgttcatgagctgttttctgcttattttcataagctctccaggctagtttat 22236161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 35064924 - 35064855
Alignment:
Q  59 tacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||| ||||  |||||||||||||||| ||||||| ||| | ||||  ||||||||||||| ||||    
T  35064924 tacatgtttataaattgttttcagcttatttccataaactctccatgatatcttatgaaaacagcatata 35064855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 35958734 - 35958658
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctt 125  Q
    ||||| |||||  |||||| ||||||| |||| |||||||| | |||||| ||| ||||||| |||||||||||||||    
T  35958734 aaacagcttatatcatgttgataagatatttttagcttattgt-ataaactctccaggatagcttatgaaaacagctt 35958658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 10192350 - 10192279
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||| |||| |||||||| ||||||||||| | | ||| ||||||| || |||||||| |||||||||||    
T  10192350 catgttcgtaagttgttttcaacttattttcat-agctctccaggatagcttttgaaaacaacttataactta 10192279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 11264375 - 11264299
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    ||||| |||||| |||||  |||||||| ||||||| ||||| | ||| ||||| | ||||||||||| ||||||||    
T  11264375 cttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaacttataac 11264299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 16199999 - 16200051
Alignment:
Q  76 ttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| |||||||||||||||  |||| | ||||| ||||||||||||||||||    
T  16199999 tttttagcttattttcataagtcctccaagatagcttatgaaaacagcttata 16200051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 37864342 - 37864386
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttca 92  Q
    ||||| ||||||| ||||||||||| |||||||| ||||||||||    
T  37864342 aaacagcttattaaatgttcataagctgttttcaccttattttca 37864386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 45732741 - 45732693
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggata 108  Q
    ||||||||||| |||||||||||||||||| ||||| | ||| ||||||    
T  45732741 acatgttcatatgatgttttcagcttatttccataagctctcgaggata 45732693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 45738139 - 45738099
Alignment:
Q  66 tcataagatgttttcagcttattttcataaaccctcaagga 106  Q
    |||||||||||||||||||||||| ||||| | ||||||||    
T  45738139 tcataagatgttttcagcttatttccataagctctcaagga 45738099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 132
Target Start/End: Original strand, 46415794 - 46415866
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    |||||| |||||| ||||||||||| |||||  ||| | ||| ||||||| ||||||||| | ||||||||||    
T  46415794 acatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaagaacttataactt 46415866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 6647461 - 6647385
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    ||||| |||||||||||||||||||||| ||||||||||||| | ||| | ||||| |||||||||||| |||||||    
T  6647461 cttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattataac 6647385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 4247058 - 4247136
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| ||||||||||||  |||||||||||| ||||||||| || || |||| |  |||||||||||||||||||||||    
T  4247058 ttatgacatgttcataatctgttttcagcttgttttcataagccttctaggacaacttatgaaaacagcttataactta 4247136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 48 - 134
Target Start/End: Complemental strand, 31624170 - 31624084
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaa 134  Q
    ||||| ||||| ||||||||||||| |||||||| |||||||||||||   ||| | |||||  ||||||||||||||||| |||||    
T  31624170 aaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagcttaa 31624084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 4006780 - 4006709
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| |||||| | |||||||||||||||||||| | |||| |||||| ||||||||||| |||||| ||||    
T  4006780 atgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagctta 4006709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 31671090 - 31671149
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||||||||||||||||| |  || ||||||||||| |||||||||||||| ||||    
T  31671090 tgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagctta 31671149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 74 - 129
Target Start/End: Original strand, 33911298 - 33911353
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataa 129  Q
    ||||||||||||||||||| ||||  |  |||||||||||||||||||||||||||    
T  33911298 tgttttcagcttattttcacaaacttttcaggatagtttatgaaaacagcttataa 33911353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 34939866 - 34939755
Alignment:
Q  6 agtgagatgaacacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaagg 105  Q
    ||||| || |||| ||| ||||||||||  || |||||   |||||| ||||| |||||| |||||  |||||||||||||||| ||||||| ||| |||    
T  34939866 agtgacataaacatttgtgaaactgttttggagagcttacggaaacagcttatgacatgtccataaattgttttcagcttatttccataaactctccagg 34939767  T
Q  106 atagtttatgaa 117  Q
    |||| |||||||    
T  34939766 atagcttatgaa 34939755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 2112282 - 2112200
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||| ||||| ||||||||||||| ||||||| | ||||||  |||| | ||| | ||||||||||||||||| ||||||    
T  2112282 agaaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttata 2112200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 769218 - 769134
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||| ||||||||||||| |||||||| |||| |||| |||  |||||| | ||| |||||||||||| ||||| ||||    
T  769218 aaacatcttatgacatgttcataagctgttttcaacttactttcttaagtcctcaa-gttagcttatgaaaacagtttatagctta 769134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 22743561 - 22743520
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattt 89  Q
    ||||| ||||||||||||||||||| ||||||||||||||||    
T  22743561 aaacaacttattacatgttcataagctgttttcagcttattt 22743520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 133
Target Start/End: Complemental strand, 24782123 - 24782054
Alignment:
Q  64 gttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||| | |||| || |||||||||||| | |||||||||||||||| |||  |||||||||||||    
T  24782123 gttcataagctatttttagtttattttcataagctctcaaggatagtttattaaagtagcttataactta 24782054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 28641739 - 28641828
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaaact 137  Q
    ||||| ||||| ||||||||||||| |||||| ||||||||||||||| | ||  || |||| |  ||||||||| ||||| ||||||||    
T  28641739 aaacagcttataacatgttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaacagtttatagcttaaact 28641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Original strand, 281844 - 281923
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||||  ||||| |||||||||||||||| ||| | | ||| ||||||| ||||||| |||||||||| ||||    
T  281844 cttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacagcttatagctta 281923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 696682 - 696635
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  696682 aaacagcttatgacatgttcataagctgttttcagcttattctcataa 696635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 94
Target Start/End: Complemental strand, 821872 - 821833
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcata 94  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  821872 ttatgacatgttcataagctgttttcagcttattttcata 821833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 6963037 - 6963116
Alignment:
Q  16 acacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||||| ||||||||||||   |||||  ||| ||| |||||||||||| |||||| |||||||| |||| ||||||||    
T  6963037 acacttgtgaaactgtttgatccagcttatagacacaacttattacatgtccataagctgttttcatcttaatttcataa 6963116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 35070475 - 35070541
Alignment:
Q  66 tcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    ||||||| |||||||| ||||||||||||| | |||||  |||| |||  |||||||||||||||||    
T  35070475 tcataagctgttttcaacttattttcataagctctcaaacatagcttacaaaaacagcttataactt 35070541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 1498035 - 1497978
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataact 131  Q
    |||||||| ||||||||||||| | ||| | ||||||||||||||||  |||||||||    
T  1498035 tgttttcaccttattttcataagctctccaagatagtttatgaaaacttcttataact 1497978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 4420725 - 4420676
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||||  |||| ||||||||||||| |||||||||||||||| |||||    
T  4420725 agaaacaaattatgacatgttcataagctgttttcagcttatttccataa 4420676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 6537021 - 6536980
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||||||||||| |||||||||||||||| |||||    
T  6537021 cttatgacatgttcataagttgttttcagcttatttccataa 6536980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 7446327 - 7446400
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    ||||| ||| ||| ||||| ||||||||| |||||||||||| ||| |   ||||| |||||||||||||||||    
T  7446327 cttatcacacgtttataagttgttttcaggttattttcataagccccctgagatagcttatgaaaacagcttat 7446400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 8010439 - 8010350
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataacttaaa 135  Q
    ||||||| || || ||||||||||||| | ||||||| ||||||  ||||   ||| ||||||  |||| ||||||||||||||||||||    
T  8010439 agaaacaactcatgacatgttcataagctattttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaa 8010350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 9027652 - 9027611
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| |||||| |||||| ||||||||||||||||||||||    
T  9027652 cttatgacatgtccataagttgttttcagcttattttcataa 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 101
Target Start/End: Original strand, 10616703 - 10616756
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctc 101  Q
    ||||| ||||| ||||||||||||| ||||||||| ||||||| ||||| ||||    
T  10616703 aaacaccttatgacatgttcataagctgttttcagtttatttttataaatcctc 10616756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 95
Target Start/End: Complemental strand, 13908537 - 13908496
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| |||||||| |||| ||||||||||||||||||||||    
T  13908537 cttatgacatgttcgtaagctgttttcagcttattttcataa 13908496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 21024285 - 21024212
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    ||||| |||| |||||| | |||||||| |||||||||||||   ||| |||||||| |||||||| |||||||    
T  21024285 cttatgacatattcatatgttgttttcaacttattttcataagttctcgaggatagtatatgaaaatagcttat 21024212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 32386095 - 32386176
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| ||||  |||||| |||||| ||||||||||||| |||||||| |  || ||||||  | ||||||||||||||||    
T  32386095 gaaacagcttacaacatgtccataagttgttttcagcttactttcataagctttccaggataactaatgaaaacagcttata 32386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 3528883 - 3528811
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaac 120  Q
    ||||| ||||| |||||| |||||  |||||||| ||||||||||||| | ||| | ||||||| ||||||||    
T  3528883 aaacaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaac 3528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 54 - 126
Target Start/End: Original strand, 9323492 - 9323564
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||||||||||  || ||||||||||| ||||||| |||||||  |  ||||||| ||||| ||||||||||    
T  9323492 cttattacatgtaaattagatgttttcaacttatttacataaacttttcaggatagcttatggaaacagctta 9323564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 14492370 - 14492302
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| |||||||  ||||||||||| |||| || |||| ||| ||||||  ||||||||||||||||||    
T  14492370 acatattcataaattgttttcagctgatttccacaaactctctaggataacttatgaaaacagcttata 14492302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 59 - 119
Target Start/End: Original strand, 17241253 - 17241313
Alignment:
Q  59 tacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||| | ||||| | |||||||    
T  17241253 tacatgttcataagttgttttcaacttatttccataaactctccaagatagctaatgaaaa 17241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 30523740 - 30523668
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    |||||| |||||  |||||||||||| |||||||| || ||||  |||| | ||||||||||| |||||||||    
T  30523740 gaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa 30523668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 34404719 - 34404763
Alignment:
Q  52 atcttattacatgttcataagatgttttcagcttattttcataaa 96  Q
    ||||||| |||||| |||||| |||||||||| ||||||||||||    
T  34404719 atcttatgacatgtacataagctgttttcagcatattttcataaa 34404763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 130
Target Start/End: Original strand, 34430469 - 34430533
Alignment:
Q  66 tcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    ||||||| | ||||||||||||||||||||   ||| | ||||| ||||||||||| ||||||||    
T  34430469 tcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttataac 34430533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 48 - 126
Target Start/End: Complemental strand, 41817248 - 41817170
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||||||||| ||||||| ||||  |||||||||||||||| ||||| | ||| ||||||||||||||||| ||||||    
T  41817248 aaacatcttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagtttatgaaaatagctta 41817170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Original strand, 5759576 - 5759645
Alignment:
Q  60 acatgttcataagatgt-tttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||| |||||| ||| |||||||||||||||| |||||||| || |||| ||||||||||||||||||    
T  5759576 acatgtccataagttgtgtttcagcttattttcacaaaccctccagaatagcttatgaaaacagcttata 5759645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 22681187 - 22681260
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| |||||| ||||||||| |||||   ||| ||||||| |||||||||||||||||| ||||    
T  22681187 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagctta 22681260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 48 - 119
Target Start/End: Complemental strand, 787412 - 787341
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    ||||| ||||| |||||| |||||| |||||||||||||| | |||||||| || | |||||||||||||||    
T  787412 aaacagcttatgacatgtccataagctgttttcagcttatctccataaaccatctaagatagtttatgaaaa 787341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 133
Target Start/End: Complemental strand, 1625966 - 1625895
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||||||||||||| |||||| |||   ||| | ||||| ||||||||||| |||||||||||    
T  1625966 atgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataactta 1625895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 10567138 - 10567056
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataa 129  Q
    |||||| ||||| ||||| ||||||| ||||||||||| ||||||| || | ||| || |||||||||| |||||| ||||||    
T  10567138 gaaacagcttatgacatgatcataagttgttttcagctaattttcacaagctctccagaatagtttatggaaacagtttataa 10567056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 66 - 128
Target Start/End: Complemental strand, 11488339 - 11488277
Alignment:
Q  66 tcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||| |||||||||||||||| ||||| | ||| ||||||| |||||||| |||||||||    
T  11488339 tcataagttgttttcagcttatttgcataatctctccaggatagcttatgaaagcagcttata 11488277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 63 - 121
Target Start/End: Original strand, 35379021 - 35379079
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||||||| |||||||||||||||||||||| | ||| | ||||| |||||||||||    
T  35379021 tgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 9174880 - 9174815
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||||||||| | |||||||||||||||||||| | ||  | ||||| ||||||||||||||||||    
T  9174880 tgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttata 9174815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 133
Target Start/End: Original strand, 10198482 - 10198555
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| |||| ||||||||||| ||||| | ||| ||||||| |||| |||||||| |||| ||||    
T  10198482 acatgttcataagctgttgtcagcttatttccataatctctctaggatagattataaaaacagcctatatctta 10198555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 19333327 - 19333392
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctt 125  Q
    ||||||||||||| |||| ||||||||||||||||| | ||| |  |||||||| |||||||||||    
T  19333327 acatgttcataagctgttctcagcttattttcataagctctccaatatagtttaagaaaacagctt 19333392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 33941989 - 33941904
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||| ||| ||||||||| || ||||| |||||| |||||||| ||| | ||||| |||||||||||  ||||||||||    
T  33941989 aaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataactta 33941904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 62 - 119
Target Start/End: Complemental strand, 44443387 - 44443330
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    ||||||||||| |||||||||||||||||||||  | ||||| ||||| |||||||||    
T  44443387 atgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaa 44443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 3235390 - 3235454
Alignment:
Q  64 gttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||| |||||||||||||||| |||||||  |  | |||||| |||||||||||||||||    
T  3235390 gttcataagctgttttcagcttatttccataaacttttcaagatagtatatgaaaacagcttata 3235454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 9478003 - 9477947
Alignment:
Q  77 tttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||||||||||| | ||| ||||||| ||||||||||| |||||||||||    
T  9478003 tttcaacttattttcataacctctccaggatagcttatgaaaacaacttataactta 9477947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 29316765 - 29316845
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| ||||||||||||| | |||||||||||||| |||||   ||| | ||||| | ||||||||||||||||    
T  29316765 aaacagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttata 29316845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 33525956 - 33526036
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||| ||||| |||||| |||||| || |||||||||||||  ||||||| || || |||| ||||||||| |||||||    
T  33525956 gaaacaacttataacatgtccataagttggtttcagcttatttctataaaccttctagtatagcttatgaaaaaagcttat 33526036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 62 - 129
Target Start/End: Complemental strand, 4026883 - 4026816
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataa 129  Q
    |||||| ||||  |||||||||||||||||||||   ||  |||||| ||||||||||||||||||||    
T  4026883 atgttcctaagcagttttcagcttattttcataagttcttcaggataatttatgaaaacagcttataa 4026816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 25790207 - 25790140
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttat 114  Q
    |||||| |||||||||||||| |||| |||||| | ||||||||||||| | ||| ||||||| ||||    
T  25790207 gaaacagcttattacatgttcctaagctgttttgaacttattttcataagctctccaggatagattat 25790140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 33942224 - 33942145
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||||||||||| ||||||||||| |||||||| | | ||| | ||| | ||||||||||| |||||| ||||    
T  33942224 cttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaacaacttatagctta 33942145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 1742021 - 1742107
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||| |||||| | | |||| ||||||| ||||||| ||  | ||||| |||||||||||||||||| ||||    
T  1742021 gaaacaacttatgacatgtgcataagctatcttcaacttatttccataaactcttcatgatagattatgaaaacagcttatatctta 1742107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 10563547 - 10563633
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| | ||| |||||| |||||| | |||||||||||||||| ||| | ||  || |||| ||||||||||| |||||||||||    
T  10563547 gaaacagcctatgacatgtccataagctattttcagcttattttcttaagctcttcagcatagcttatgaaaacaacttataactta 10563633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 10884525 - 10884591
Alignment:
Q  62 atgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| ||||||  ||| ||| ||||||||||||| | ||| ||||||| ||||||||||||||||||    
T  10884525 atgtgcataagcagttctcaacttattttcataagctctctaggatagcttatgaaaacagcttata 10884591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 14666629 - 14666543
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| ||||||||||| | |||||||| ||||||||||||| |   | | ||||| || |||||||| |||||||||||    
T  14666629 gaaacaacttatgacatgttcataggttgttttcaccttattttcataagcataccaagatagcttgtgaaaacaacttataactta 14666543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 32821891 - 32821809
Alignment:
Q  46 agaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||| ||||| |||||| |||||| ||||||||| ||||||  |||| | ||  ||||||| |||||||||||| |||||    
T  32821891 agaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtttata 32821809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 43141952 - 43141866
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||| ||||| |||||  |||||| ||||||||  |||||| ||||||| ||  ||||||| ||||||||||| |||||| ||||    
T  43141952 gaaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagctta 43141866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 1939323 - 1939396
Alignment:
Q  49 aacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    |||| ||||| |||||| |||||| |||||||| ||||||| ||||| | ||| || |||| ||||||||||||    
T  1939323 aacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaacag 1939396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 127
Target Start/End: Original strand, 13630297 - 13630350
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttat 127  Q
    |||||||| |||||| |||||||| ||||||||||| ||| ||||||| |||||    
T  13630297 tgttttcaacttattgtcataaactctcaaggatagattaggaaaacaacttat 13630350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 18179230 - 18179315
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||  |||||| ||| || | |||||||||||||||| |||   ||| ||||||| |||||||| ||||||||| ||||    
T  18179230 aaacatcttaagacatgtccattagctattttcagcttattttcgtaagttctccaggatagcttatgaaagcagcttatagctta 18179315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 33192263 - 33192164
Alignment:
Q  67 cataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt---aaacttatatgaaaatatcttgactttattt 163  Q
    |||||| |||||||||||||| || |||| | ||| ||||||| |||||||| ||||| |||| ||    |||||||||||||| |  ||||||||||||    
T  33192263 cataagctgttttcagcttatatttataagctctccaggatagcttatgaaaccagctcataagttttataacttatatgaaaacagtttgactttattt 33192164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 40682400 - 40682468
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    |||||||||| |||||||| |||||||||||||   ||||| ||||  |||||||||| |||||||||||    
T  40682400 tgttcataagttgttttcaacttattttcataagttctcaa-gatatcttatgaaaactgcttataactt 40682468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 95
Target Start/End: Original strand, 7928304 - 7928336
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataa 95  Q
    |||||||||| ||||||||||||||||||||||    
T  7928304 tgttcataagttgttttcagcttattttcataa 7928336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 11063569 - 11063521
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||||| |||| |||||| |||||| |||||| |||||||||||||||    
T  11063569 gaaacatattatgacatgtccataagttgtttttagcttattttcataa 11063521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 13736303 - 13736363
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||||||  |||||||||||| | ||| || |||| ||||||||||||||||||    
T  13736303 ataagctgttttcaagttattttcataagctctctagtatagcttatgaaaacagcttata 13736363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 81
Target Start/End: Complemental strand, 19978058 - 19977994
Alignment:
Q  17 cacttgcgaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttca 81  Q
    ||||||||| ||||||||||| | |||  ||||||| ||||| ||| ||||||||| ||||||||    
T  19978058 cacttgcgagactgtttgagagaacttatagaaacaacttataacacgttcataagttgttttca 19977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 30552609 - 30552705
Alignment:
Q  24 gaaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatg-ttttcagcttattttcataaaccctcaaggatagtttatgaaaa 119  Q
    |||||||||||||| || ||   |||||| ||||| ||||||  ||||| || |||| ||||||||| ||||| | ||| |||||||||||||||||    
T  30552609 gaaactgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaa 30552705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 33319830 - 33319882
Alignment:
Q  76 ttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||||||||||||||   ||| | |||||||||||||||||| |||||    
T  33319830 ttttcagcttattttcataagttctccaagatagtttatgaaaacagtttata 33319882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 41809234 - 41809282
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||| ||||| ||||||||||||| |||||| ||||||||| |||||    
T  41809234 gaaacaacttatgacatgttcataagttgtttttagcttatttccataa 41809282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 63 - 95
Target Start/End: Complemental strand, 43511150 - 43511118
Alignment:
Q  63 tgttcataagatgttttcagcttattttcataa 95  Q
    |||||||||| ||||||||||||||||||||||    
T  43511150 tgttcataagctgttttcagcttattttcataa 43511118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 54 - 128
Target Start/End: Original strand, 6552288 - 6552362
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| |||| |||||||| |||||||||||||||||||||||| ||  | ||||||||||||||| || |||||    
T  6552288 cttatgacatattcataagctgttttcagcttattttcataaactctgcatgatagtttatgaaaatagtttata 6552362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 60 - 130
Target Start/End: Original strand, 24363603 - 24363673
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    |||||| |||||| |||||||||||||||| ||||| | ||| ||||||| ||||||||||| ||||||||    
T  24363603 acatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttataac 24363673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 38010782 - 38010709
Alignment:
Q  60 acatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||||||| |||||| ||||||||| |||||   ||| ||||||| |||||||||||||||||| ||||    
T  38010782 acatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagctta 38010709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 27378836 - 27378892
Alignment:
Q  66 tcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    ||||||| ||||||||| |||||||||||| | ||| ||||||||||||||||||||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaacag 27378892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 36598327 - 36598387
Alignment:
Q  29 tgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattt 89  Q
    ||||||||| |||||   |||||||||||| ||||||||||||| ||||||||||||||||    
T  36598327 tgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 132
Target Start/End: Complemental strand, 7521327 - 7521268
Alignment:
Q  73 atgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    |||||||||||||||||||| || | ||| |||||||||||| |||||||||||| ||||    
T  7521327 atgttttcagcttattttcagaagctctctaggatagtttattaaaacagcttatgactt 7521268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 44151477 - 44151555
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||| |||||| ||||||||||||||||||||||| ||||| |  |  | ||||||||||||||||| |||||| ||||    
T  44151477 ttatgacatgtccataagatgttttcagcttatttccataagcttttcaagatagtttatgaaaacaacttatagctta 44151555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 68 - 133
Target Start/End: Complemental strand, 44822019 - 44821954
Alignment:
Q  68 ataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||||| |||||||||||||   ||| || |||| |||||||||||||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataactta 44821954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 9038191 - 9038112
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||| ||||| ||||||||||||  ||||||||||||||||||| ||   ||| | |||||||||||||||||| |||||    
T  9038191 aaacagcttatgacatgttcataat-tgttttcagcttattttcacaagttctccatgatagtttatgaaaacagtttata 9038112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 133
Target Start/End: Complemental strand, 39907870 - 39907798
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||||||| || |||||||||||||||||||| |   ||| | |||||||||||||||||| ||||| ||||    
T  39907870 catgttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagctta 39907798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 46082116 - 46082029
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggata--gtttatgaaaacagcttataactta 133  Q
    ||||| ||||| |||||  |||||| |||||||||||||||||||||| | ||| || |||  || |||||||||| |||||||||||    
T  46082116 aaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaacaacttataactta 46082029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 7244753 - 7244686
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacag 122  Q
    |||| ||||| ||||||| |||||||||||||||||||||| | ||| |  |||| ||||||||||||    
T  7244753 ttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaacag 7244686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 9423591 - 9423662
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    |||| ||||||||||||| ||||||||||||||||  | || | ||| ||||||| |||| |||||||||||    
T  9423591 ttatgacatgttcataagttgttttcagcttatttcaagaagctctccaggatagcttattaaaacagctta 9423662  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Complemental strand, 11048107 - 11048060
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  11048107 aaacaacttatgacatgttcataagctgttttcagcttattctcataa 11048060  T

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Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 126
Target Start/End: Original strand, 34754779 - 34754877
Alignment:
Q  27 actgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagctta 126  Q
    ||||||||||| ||||| |  ||||||||||| ||| |   ||||| |||||||||||||||| ||| | | ||| ||||||||||||||||||| ||||    
T  34754779 actgtttgagagagcttaagaaaacatcttatgacaagcctataagttgttttcagcttatttccatcagctctc-aggatagtttatgaaaacaactta 34754877  T

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Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 95
Target Start/End: Original strand, 43219634 - 43219681
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    ||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  43219634 aaacagcttatgacatgttcataagctgttttcagcttattctcataa 43219681  T

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Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 47427326 - 47427377
Alignment:
Q  81 agcttattttcataaaccctcaaggatagtttatgaaaacagcttataactt 132  Q
    ||||||||||  ||||| |||||| |||||||||||||| ||||||||||||    
T  47427326 agcttatttttttaaactctcaagaatagtttatgaaaatagcttataactt 47427377  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 54 - 124
Target Start/End: Complemental strand, 529449 - 529379
Alignment:
Q  54 cttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagct 124  Q
    ||||| ||| ||||||||| |||||||| | ||||||||||| | ||| | ||||| ||||||||||||||    
T  529449 cttatgacaagttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaacagct 529379  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 35007667 - 35007633
Alignment:
Q  58 ttacatgttcataagatgttttcagcttattttca 92  Q
    ||||||||||||||| |||||||||||||||||||    
T  35007667 ttacatgttcataagttgttttcagcttattttca 35007633  T

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Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 25130086 - 25130159
Alignment:
Q  55 ttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    |||| ||||||||||||| |||||||||| |||||||| |||   || | ||||| || |||||||||||||||    
T  25130086 ttatgacatgttcataagctgttttcagcatattttcagaaattttccaagatagcttttgaaaacagcttata 25130159  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 44615094 - 44615179
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| ||||| |||||| || ||| ||||||||  |||||| ||||||| ||||||| ||  |||||||||||| ||||| ||||    
T  44615094 aaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatgaaaacagtttatagctta 44615179  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 514819 - 514767
Alignment:
Q  76 ttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttata 128  Q
    ||||||||||||||| | || | ||| ||||||| ||||||||||||||||||    
T  514819 ttttcagcttattttgacaagctctccaggatagcttatgaaaacagcttata 514767  T

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Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 93
Target Start/End: Complemental strand, 5276334 - 5276266
Alignment:
Q  25 aaactgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcat 93  Q
    ||||||||||||| |||||    ||||||||||| |||| ||||| || |||||||| |||||||||||    
T  5276334 aaactgtttgagagagcttatgcaaacatcttatgacatcttcattagttgttttcaccttattttcat 5276266  T

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Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 15075088 - 15075160
Alignment:
Q  61 catgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    ||||| |||||| |||||| ||||||||| ||||| | ||| | | ||||||||||||| | |||||||||||    
T  15075088 catgtacataagctgtttttagcttatttccataagctctctaaggtagtttatgaaaataacttataactta 15075160  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 18962588 - 18962644
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    |||||||| |||||||||||||  |||| | ||||| ||||||||||| ||||||||    
T  18962588 tgttttcaccttattttcataaggcctccaagatagcttatgaaaacaccttataac 18962644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 18965726 - 18965782
Alignment:
Q  74 tgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataac 130  Q
    |||||||||||| |||||||||  |||| | ||||| ||||||||||| ||||||||    
T  18965726 tgttttcagcttgttttcataagacctccaagatagcttatgaaaacaacttataac 18965782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 40688993 - 40689061
Alignment:
Q  65 ttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaacagcttataactta 133  Q
    |||||||| |||||| |||||||||||||||    || ||||||| ||||||| |||||||||| ||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagctta 40689061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 48157089 - 48157157
Alignment:
Q  27 actgtttgagaaagcttcaagaaacatcttattacatgttcataagatgttttcagcttattttcataa 95  Q
    |||||||| || |||||  ||||||| |||||  ||||| |||||| |||||||||||||||| |||||    
T  48157089 actgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataa 48157157  T

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Target: scaffold0608 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 9627 - 9671
Alignment:
Q  48 aaacatcttattacatgttcataagatgttttcagcttattttca 92  Q
    ||||| ||||||||||||||||||| |||||| ||||||||||||    
T  9627 aaacaacttattacatgttcataagctgtttttagcttattttca 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 306407 - 306333
Alignment:
Q  47 gaaacatcttattacatgttcataagatgttttcagcttattttcataaaccctcaaggatagtttatgaaaaca 121  Q
    |||||| ||||| |||||  |||||| ||||||||||||| || ||||| | ||| ||||||| |||||||||||    
T  306407 gaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaaca 306333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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