View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1104_low_36 (Length: 396)

Name: NF1104_low_36
Description: NF1104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1104_low_36
NF1104_low_36
[»] chr7 (47 HSPs)
chr7 (136-396)||(46818341-46818601)
chr7 (1-117)||(46818630-46818746)
chr7 (160-335)||(6001937-6002112)
chr7 (160-335)||(31235778-31235953)
chr7 (166-335)||(32521913-32522081)
chr7 (162-335)||(35667218-35667390)
chr7 (160-335)||(22927856-22928031)
chr7 (175-396)||(42066984-42067206)
chr7 (164-335)||(1448816-1448986)
chr7 (212-335)||(17611093-17611216)
chr7 (160-335)||(20116499-20116673)
chr7 (160-396)||(26583630-26583864)
chr7 (160-335)||(35496161-35496336)
chr7 (163-396)||(42311199-42311435)
chr7 (160-335)||(46821930-46822106)
chr7 (160-396)||(14627801-14628040)
chr7 (160-335)||(23085437-23085612)
chr7 (160-335)||(1485243-1485417)
chr7 (160-306)||(23425387-23425532)
chr7 (175-396)||(35261229-35261452)
chr7 (175-321)||(48207833-48207978)
chr7 (175-335)||(23786508-23786666)
chr7 (160-335)||(26492281-26492456)
chr7 (160-335)||(42408278-42408453)
chr7 (160-396)||(46338969-46339209)
chr7 (185-396)||(6558817-6559032)
chr7 (160-321)||(45199032-45199192)
chr7 (183-335)||(17222986-17223136)
chr7 (251-335)||(32684675-32684759)
chr7 (160-254)||(36143782-36143875)
chr7 (262-335)||(34773729-34773802)
chr7 (272-335)||(2843227-2843290)
chr7 (160-335)||(433677-433853)
chr7 (160-335)||(21266308-21266481)
chr7 (262-322)||(24069425-24069485)
chr7 (212-330)||(20083301-20083424)
chr7 (180-314)||(17499666-17499799)
chr7 (180-314)||(17553415-17553548)
chr7 (253-335)||(19560007-19560089)
chr7 (212-322)||(969478-969588)
chr7 (216-326)||(3224437-3224547)
chr7 (178-232)||(43369855-43369908)
chr7 (160-217)||(2843332-2843388)
chr7 (160-229)||(3860868-3860935)
chr7 (163-216)||(32684604-32684656)
chr7 (276-328)||(3267237-3267289)
chr7 (276-328)||(9977231-9977283)
[»] chr1 (56 HSPs)
chr1 (160-396)||(18569233-18569471)
chr1 (160-396)||(39987310-39987547)
chr1 (161-335)||(34519054-34519227)
chr1 (160-396)||(25406206-25406445)
chr1 (160-335)||(28035059-28035234)
chr1 (212-327)||(39927548-39927663)
chr1 (160-335)||(9919309-9919484)
chr1 (160-335)||(51868631-51868806)
chr1 (160-335)||(5324544-5324718)
chr1 (160-396)||(38520457-38520694)
chr1 (160-335)||(51871784-51871958)
chr1 (175-396)||(3871344-3871567)
chr1 (160-396)||(5701177-5701418)
chr1 (223-396)||(9687127-9687302)
chr1 (160-343)||(27872659-27872841)
chr1 (160-335)||(11453854-11454030)
chr1 (160-396)||(19715817-19716058)
chr1 (210-335)||(48365751-48365876)
chr1 (160-335)||(50166085-50166260)
chr1 (179-396)||(31836745-31836965)
chr1 (175-335)||(7342657-7342817)
chr1 (160-335)||(7997707-7997884)
chr1 (175-326)||(44637357-44637507)
chr1 (160-335)||(35584604-35584782)
chr1 (160-335)||(40880999-40881174)
chr1 (162-335)||(9172410-9172585)
chr1 (162-335)||(9180392-9180567)
chr1 (160-335)||(45426052-45426223)
chr1 (160-335)||(14545440-14545612)
chr1 (175-396)||(41081626-41081849)
chr1 (160-329)||(7312097-7312259)
chr1 (160-335)||(20266222-20266397)
chr1 (162-325)||(33291414-33291577)
chr1 (160-335)||(50272126-50272301)
chr1 (160-335)||(30878995-30879170)
chr1 (262-335)||(50148392-50148465)
chr1 (162-289)||(19723256-19723382)
chr1 (160-335)||(30818337-30818506)
chr1 (223-326)||(47132865-47132968)
chr1 (251-326)||(12635160-12635235)
chr1 (223-322)||(16262823-16262922)
chr1 (270-329)||(40646700-40646759)
chr1 (238-335)||(33817167-33817263)
chr1 (238-335)||(33876637-33876733)
chr1 (251-310)||(29837635-29837694)
chr1 (272-335)||(45805814-45805877)
chr1 (205-285)||(32679163-32679242)
chr1 (7-75)||(36882892-36882960)
chr1 (251-328)||(14872633-14872706)
chr1 (251-326)||(49626904-49626978)
chr1 (160-217)||(25728064-25728120)
chr1 (251-327)||(799812-799888)
chr1 (260-340)||(5855922-5856002)
chr1 (276-328)||(27456555-27456607)
chr1 (162-241)||(30558736-30558813)
chr1 (262-326)||(41994428-41994492)
[»] chr4 (59 HSPs)
chr4 (160-396)||(35964898-35965136)
chr4 (163-335)||(18138899-18139071)
chr4 (163-335)||(49126112-49126284)
chr4 (160-396)||(51317914-51318152)
chr4 (175-346)||(2624441-2624611)
chr4 (164-396)||(46991053-46991287)
chr4 (160-335)||(10389740-10389914)
chr4 (163-396)||(25273811-25274050)
chr4 (160-335)||(4643786-4643961)
chr4 (160-396)||(9528799-9529039)
chr4 (160-335)||(10359533-10359707)
chr4 (196-396)||(27593751-27593952)
chr4 (177-326)||(35261137-35261285)
chr4 (175-335)||(12265398-12265557)
chr4 (160-335)||(38706696-38706871)
chr4 (175-396)||(53616572-53616797)
chr4 (160-330)||(56194527-56194699)
chr4 (175-396)||(29965577-29965802)
chr4 (175-335)||(868107-868265)
chr4 (160-335)||(31381658-31381832)
chr4 (175-335)||(3336142-3336302)
chr4 (160-321)||(21090081-21090241)
chr4 (160-335)||(43444321-43444496)
chr4 (160-335)||(8009347-8009520)
chr4 (160-335)||(34024424-34024597)
chr4 (160-396)||(50766434-50766670)
chr4 (175-335)||(9283854-9284014)
chr4 (163-335)||(43154000-43154179)
chr4 (251-335)||(47417681-47417765)
chr4 (160-325)||(9645545-9645710)
chr4 (175-396)||(52097838-52098065)
chr4 (162-348)||(20569182-20569371)
chr4 (212-335)||(6972790-6972913)
chr4 (160-335)||(2115574-2115749)
chr4 (241-335)||(49410232-49410326)
chr4 (160-335)||(37188581-37188753)
chr4 (160-322)||(32952749-32952907)
chr4 (166-335)||(1531841-1532011)
chr4 (160-396)||(14183731-14183969)
chr4 (251-323)||(43853449-43853521)
chr4 (166-335)||(44947343-44947515)
chr4 (224-325)||(18048863-18048964)
chr4 (180-314)||(1931723-1931856)
chr4 (223-326)||(6155253-6155355)
chr4 (212-322)||(36204415-36204526)
chr4 (238-396)||(45227963-45228124)
chr4 (262-326)||(28857420-28857484)
chr4 (251-326)||(22300856-22300931)
chr4 (251-326)||(52944318-52944393)
chr4 (253-322)||(2069611-2069680)
chr4 (213-326)||(51888238-51888351)
chr4 (251-326)||(52933970-52934046)
chr4 (160-227)||(1008223-1008289)
chr4 (251-326)||(9713919-9713994)
chr4 (251-326)||(22038829-22038904)
chr4 (262-325)||(36161729-36161792)
chr4 (264-326)||(21365091-21365153)
chr4 (225-326)||(9643369-9643470)
chr4 (162-217)||(23100617-23100673)
[»] chr8 (47 HSPs)
chr8 (175-396)||(33342375-33342596)
chr8 (160-346)||(16794216-16794401)
chr8 (160-335)||(28239756-28239931)
chr8 (160-335)||(35580381-35580555)
chr8 (163-330)||(43192337-43192503)
chr8 (175-335)||(11196828-11196986)
chr8 (175-327)||(15597161-15597312)
chr8 (175-396)||(39153065-39153291)
chr8 (160-335)||(44099920-44100093)
chr8 (159-343)||(11725604-11725786)
chr8 (175-396)||(19876150-19876372)
chr8 (160-335)||(2655792-2655968)
chr8 (160-333)||(9619345-9619519)
chr8 (175-396)||(27747036-27747258)
chr8 (160-335)||(33896004-33896180)
chr8 (194-396)||(15046850-15047054)
chr8 (175-396)||(33298794-33299016)
chr8 (175-335)||(4808902-4809062)
chr8 (175-335)||(9498585-9498748)
chr8 (163-394)||(32724405-32724647)
chr8 (160-335)||(9072640-9072816)
chr8 (162-325)||(34611729-34611892)
chr8 (212-396)||(11464146-11464333)
chr8 (160-335)||(14906909-14907085)
chr8 (160-335)||(42448013-42448189)
chr8 (212-335)||(29777194-29777317)
chr8 (160-396)||(43890046-43890286)
chr8 (262-335)||(23851480-23851553)
chr8 (160-330)||(44577959-44578129)
chr8 (162-325)||(37565875-37566038)
chr8 (219-326)||(5333386-5333493)
chr8 (264-335)||(17949262-17949333)
chr8 (262-325)||(15889581-15889644)
chr8 (212-326)||(8443536-8443650)
chr8 (251-324)||(29617301-29617374)
chr8 (206-322)||(24099284-24099400)
chr8 (162-326)||(36532823-36532986)
chr8 (266-326)||(8981167-8981227)
chr8 (276-328)||(14544926-14544978)
chr8 (260-324)||(21237788-21237852)
chr8 (223-328)||(3673405-3673507)
chr8 (223-326)||(7883266-7883366)
chr8 (223-324)||(14916214-14916315)
chr8 (277-326)||(27498389-27498438)
chr8 (262-326)||(1236722-1236785)
chr8 (262-326)||(1239422-1239485)
chr8 (251-327)||(3240369-3240445)
[»] chr6 (36 HSPs)
chr6 (160-321)||(34489164-34489327)
chr6 (163-329)||(23947310-23947475)
chr6 (160-328)||(33543615-33543780)
chr6 (160-335)||(16419074-16419249)
chr6 (175-330)||(25337501-25337656)
chr6 (160-335)||(25064151-25064327)
chr6 (175-335)||(12165772-12165930)
chr6 (160-327)||(8028112-8028279)
chr6 (160-335)||(8196393-8196568)
chr6 (160-335)||(35001506-35001681)
chr6 (175-330)||(4351987-4352146)
chr6 (160-396)||(4468475-4468713)
chr6 (160-335)||(33740564-33740739)
chr6 (175-325)||(28635117-28635268)
chr6 (160-396)||(17237208-17237445)
chr6 (160-396)||(12652856-12653099)
chr6 (206-396)||(4984489-4984682)
chr6 (177-396)||(4088393-4088615)
chr6 (160-396)||(7881024-7881264)
chr6 (160-396)||(8496881-8497122)
chr6 (241-396)||(33110608-33110766)
chr6 (160-335)||(10228595-10228770)
chr6 (160-335)||(7876030-7876206)
chr6 (262-326)||(26588499-26588563)
chr6 (251-322)||(31296808-31296879)
chr6 (160-235)||(33109750-33109824)
chr6 (214-326)||(7976204-7976316)
chr6 (262-326)||(34185720-34185784)
chr6 (223-326)||(30493492-30493595)
chr6 (223-330)||(31575530-31575637)
chr6 (211-308)||(1704163-1704260)
chr6 (160-197)||(8266551-8266588)
chr6 (251-284)||(30776656-30776689)
chr6 (276-328)||(11321494-11321546)
chr6 (276-328)||(24227757-24227809)
chr6 (276-328)||(30894613-30894665)
[»] chr3 (52 HSPs)
chr3 (161-396)||(37169145-37169381)
chr3 (160-396)||(46178490-46178720)
chr3 (160-335)||(46934556-46934730)
chr3 (160-335)||(22802935-22803110)
chr3 (160-396)||(25162350-25162588)
chr3 (160-335)||(25631512-25631688)
chr3 (223-396)||(31794047-31794222)
chr3 (160-335)||(35499184-35499362)
chr3 (212-330)||(36734683-36734801)
chr3 (162-396)||(29503378-29503613)
chr3 (160-335)||(36906035-36906210)
chr3 (175-335)||(49552210-49552369)
chr3 (175-335)||(32607396-32607557)
chr3 (162-396)||(39917320-39917555)
chr3 (238-396)||(42719508-42719669)
chr3 (160-335)||(44907385-44907560)
chr3 (180-335)||(30648705-30648860)
chr3 (262-335)||(12116113-12116186)
chr3 (262-393)||(25849825-25849958)
chr3 (160-335)||(4178478-4178653)
chr3 (164-396)||(17237720-17237957)
chr3 (238-335)||(3848905-3849002)
chr3 (238-335)||(21488082-21488179)
chr3 (160-335)||(38855022-38855198)
chr3 (212-326)||(51202249-51202363)
chr3 (160-335)||(38440567-38440738)
chr3 (160-287)||(4172480-4172607)
chr3 (224-325)||(4396362-4396463)
chr3 (266-335)||(14464529-14464598)
chr3 (175-276)||(47980708-47980809)
chr3 (175-276)||(47989995-47990096)
chr3 (175-276)||(47999282-47999383)
chr3 (175-276)||(48008569-48008670)
chr3 (160-335)||(50611404-50611578)
chr3 (160-283)||(2342405-2342528)
chr3 (251-322)||(12947305-12947376)
chr3 (216-322)||(46322356-46322460)
chr3 (267-326)||(52496929-52496988)
chr3 (214-326)||(29239292-29239404)
chr3 (262-326)||(35175401-35175465)
chr3 (223-326)||(29922015-29922118)
chr3 (223-326)||(29971168-29971271)
chr3 (276-330)||(20464993-20465047)
chr3 (264-322)||(44805029-44805087)
chr3 (223-328)||(1649378-1649482)
chr3 (160-217)||(3850560-3850616)
chr3 (162-303)||(54378816-54378956)
chr3 (274-326)||(4821816-4821868)
chr3 (299-335)||(6910695-6910731)
chr3 (175-203)||(16235323-16235351)
chr3 (276-328)||(33579891-33579943)
chr3 (276-328)||(45424809-45424861)
[»] chr2 (57 HSPs)
chr2 (162-396)||(8805789-8806025)
chr2 (162-396)||(9986264-9986504)
chr2 (162-396)||(17319246-17319479)
chr2 (163-335)||(22421659-22421830)
chr2 (164-396)||(2808394-2808627)
chr2 (160-335)||(7015697-7015871)
chr2 (163-330)||(459265-459432)
chr2 (175-396)||(3270151-3270374)
chr2 (160-335)||(34598908-34599082)
chr2 (160-335)||(39641844-39642020)
chr2 (160-335)||(20047068-20047243)
chr2 (160-335)||(27249137-27249312)
chr2 (160-329)||(6173552-6173721)
chr2 (160-335)||(30420597-30420773)
chr2 (160-396)||(36233925-36234167)
chr2 (160-335)||(41430948-41431123)
chr2 (160-335)||(3725101-3725275)
chr2 (160-343)||(4192759-4192940)
chr2 (160-327)||(26025404-26025570)
chr2 (162-346)||(8308097-8308276)
chr2 (175-335)||(32913177-32913335)
chr2 (178-396)||(8971550-8971769)
chr2 (182-396)||(3269033-3269251)
chr2 (182-396)||(3269592-3269810)
chr2 (175-335)||(40659918-40660077)
chr2 (160-335)||(45128124-45128299)
chr2 (213-348)||(9374529-9374664)
chr2 (175-335)||(27949358-27949521)
chr2 (224-330)||(31580580-31580686)
chr2 (194-394)||(25086991-25087194)
chr2 (160-318)||(32197798-32197955)
chr2 (237-335)||(37614111-37614209)
chr2 (159-283)||(40626066-40626189)
chr2 (160-335)||(21570394-21570569)
chr2 (212-314)||(4228105-4228207)
chr2 (212-322)||(24587680-24587790)
chr2 (223-325)||(29574657-29574759)
chr2 (160-335)||(27477075-27477243)
chr2 (238-304)||(12647970-12648036)
chr2 (274-396)||(84103-84227)
chr2 (223-326)||(4264444-4264544)
chr2 (262-335)||(32679096-32679169)
chr2 (175-305)||(10248083-10248211)
chr2 (223-327)||(43397146-43397247)
chr2 (251-324)||(28533984-28534057)
chr2 (160-229)||(31581812-31581880)
chr2 (160-258)||(32680644-32680743)
chr2 (262-322)||(18113891-18113951)
chr2 (162-325)||(18694970-18695139)
chr2 (163-258)||(41712828-41712923)
chr2 (212-335)||(38293521-38293644)
chr2 (264-326)||(23903416-23903478)
chr2 (212-322)||(37994237-37994347)
chr2 (214-322)||(10929624-10929733)
chr2 (261-326)||(41327510-41327575)
chr2 (291-335)||(17261588-17261631)
chr2 (180-232)||(36323799-36323850)
[»] chr5 (43 HSPs)
chr5 (160-396)||(15570828-15571064)
chr5 (163-363)||(42886401-42886600)
chr5 (160-396)||(2057760-2057999)
chr5 (163-335)||(7613044-7613214)
chr5 (162-396)||(27266781-27267019)
chr5 (160-335)||(30371643-30371819)
chr5 (163-335)||(27576336-27576507)
chr5 (160-396)||(19259734-19259974)
chr5 (175-321)||(30298142-30298287)
chr5 (160-396)||(21060205-21060442)
chr5 (162-335)||(16981211-16981383)
chr5 (160-396)||(18677387-18677627)
chr5 (160-396)||(20257618-20257855)
chr5 (160-325)||(36344487-36344650)
chr5 (160-335)||(7150321-7150496)
chr5 (175-396)||(35475260-35475482)
chr5 (160-335)||(19280931-19281105)
chr5 (212-335)||(34881688-34881811)
chr5 (206-335)||(41184426-41184555)
chr5 (163-335)||(43148652-43148824)
chr5 (160-310)||(11767726-11767878)
chr5 (160-335)||(26578168-26578345)
chr5 (160-330)||(7246877-7247047)
chr5 (160-335)||(43261805-43261978)
chr5 (175-321)||(27751860-27752005)
chr5 (160-326)||(28235504-28235669)
chr5 (163-326)||(3271397-3271566)
chr5 (160-330)||(7241701-7241871)
chr5 (160-396)||(781308-781545)
chr5 (162-396)||(42579801-42580045)
chr5 (262-396)||(4954012-4954149)
chr5 (159-348)||(7886911-7887099)
chr5 (262-325)||(10332576-10332639)
chr5 (251-313)||(10649653-10649715)
chr5 (262-308)||(31802484-31802530)
chr5 (178-308)||(19983368-19983499)
chr5 (280-324)||(22978920-22978964)
chr5 (175-241)||(35631771-35631836)
chr5 (272-326)||(35921023-35921077)
chr5 (160-217)||(10649372-10649428)
chr5 (302-335)||(11768062-11768095)
chr5 (175-231)||(28097086-28097142)
chr5 (238-328)||(13421909-13421996)
[»] scaffold0002 (1 HSPs)
scaffold0002 (182-335)||(453871-454023)
[»] scaffold0014 (1 HSPs)
scaffold0014 (160-335)||(201359-201532)
[»] scaffold0022 (1 HSPs)
scaffold0022 (212-396)||(83360-83544)
[»] scaffold0426 (1 HSPs)
scaffold0426 (238-335)||(6299-6396)
[»] scaffold0146 (1 HSPs)
scaffold0146 (164-396)||(16242-16479)
[»] scaffold0264 (1 HSPs)
scaffold0264 (178-315)||(20402-20537)
[»] scaffold0495 (1 HSPs)
scaffold0495 (160-335)||(5314-5489)
[»] scaffold0347 (1 HSPs)
scaffold0347 (251-322)||(6017-6088)
[»] scaffold0003 (1 HSPs)
scaffold0003 (175-313)||(361807-361942)
[»] scaffold0311 (2 HSPs)
scaffold0311 (160-248)||(8636-8723)
scaffold0311 (298-335)||(8745-8782)
[»] scaffold0136 (2 HSPs)
scaffold0136 (252-328)||(10067-10140)
scaffold0136 (274-326)||(34775-34827)
[»] scaffold0042 (1 HSPs)
scaffold0042 (223-326)||(92523-92626)
[»] scaffold0127 (1 HSPs)
scaffold0127 (223-326)||(15453-15554)
[»] scaffold0039 (1 HSPs)
scaffold0039 (212-327)||(93054-93170)
[»] scaffold0445 (1 HSPs)
scaffold0445 (276-327)||(1356-1407)
[»] scaffold0372 (1 HSPs)
scaffold0372 (264-326)||(9615-9677)
[»] scaffold0113 (1 HSPs)
scaffold0113 (211-325)||(36683-36797)


Alignment Details
Target: chr7 (Bit Score: 221; Significance: 1e-121; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 136 - 396
Target Start/End: Complemental strand, 46818601 - 46818341
Alignment:
Q  136 gttgaaagaaacatggtgtacaagtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatc 235  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  46818601 gttgaaagaaacatggtgtacaagtctttttctctctcgctcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatc 46818502  T
Q  236 cgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46818501 cgagtgtggcggtgcgttgttcgaaatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatattaaaagatcgattgttca 46818402  T
Q  336 gttaaagaatttgcgcaacgttgcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    || |||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  46818401 gtcaaagaattggcgcaacgttgcagatccagagtcatgtgtattccgttcactttaattt 46818341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 46818746 - 46818630
Alignment:
Q  1 caagaatagaaaaatagcaagaaatgctattttctctgatggacattggagaattgaggttaaggatcctagaaggttgaactacatagattagattata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46818746 caagaatagaaaaatagcaagaaatgctattttctctgatggacattggagaattgaggttaaggatcctagaaggttgaactacatagattagattata 46818647  T
Q  101 atattatggtgtacaag 117  Q
    |||  ||||||||||||    
T  46818646 ataacatggtgtacaag 46818630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 6001937 - 6002112
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||| ||  || ||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||| |||||||| |||  ||||||||     
T  6001937 tctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctacgtgatttcgtcatctgagtgtggcggtttgttgttcgt 6002036  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||||||||||||||||| ||||| || ||||||||||||| ||||||||||||||||| ||| ||||    
T  6002037 cgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaaagatcaattattca 6002112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 31235953 - 31235778
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| | |||||| ||| | |||||||||||||  ||||||| |||  ||||||||     
T  31235953 tctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgatttcgtcatctaagtgtggcggtttgttgttcgt 31235854  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||| ||||    
T  31235853 cgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattca 31235778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 166 - 335
Target Start/End: Complemental strand, 32522081 - 32521913
Alignment:
Q  166 tctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatctt 265  Q
    |||||||  |||||| ||||||||||||||| |||||||||||  ||||||||||| | |||||| |||| ||||||||| ||| |||||||| ||||||    
T  32522081 tctctctatttcaatttaaataagtgatttt-cacatagatttatgttttttcttcgttatttcgccatctgagtgtggttgtgtgttgttcgtcatctt 32521983  T
Q  266 gtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||| ||| ||||    
T  32521982 gtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatcaattattca 32521913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 162 - 335
Target Start/End: Complemental strand, 35667390 - 35667218
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |     
T  35667390 tttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcg 35667292  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||| |||||||| |||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  35667291 tcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 35667218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 22928031 - 22927856
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg-gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  ||||||||||||||||||  ||||||| |||| | |  |||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  22928031 tctttttctctctatttcaatctaaataagtga-ctttcacacagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 22927933  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  22927932 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 22927856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 42067206 - 42066984
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||| ||||  |||||||| | ||||||||||||     
T  42067206 ttcaatctaaataagtgatttt-cacatagatatagattttttctttctgatttcatcatctaagtgtgttggtttgttgttcgtcgtcttgtgcggcgc 42067108  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcag-agtc 371  Q
    ||||||||||| ||| || ||||||||||||||| |||||||||| |||||||||| |||| | ||||| ||  ||| ||||||||||||| | | || |    
T  42067107 tgtttgatttctcgtcttcttgcggtgttcatttgattcatattg-aagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaagcc 42067009  T
Q  372 atgtgtattccggtcactttaattt 396  Q
    |||  ||||||||||||||||||||    
T  42067008 atgaatattccggtcactttaattt 42066984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 335
Target Start/End: Complemental strand, 1448986 - 1448816
Alignment:
Q  164 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatc 263  Q
    |||||||||  |||||||||||||||||||||| ||||||||| | | |||||| ||  ||||||| |||||  |||||||| ||  |||||||| | |     
T  1448986 tttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttatttgtgatttcatcatctaagtgtggttgtttgttgttcgtcgta 1448888  T
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||||||| ||| ||||    
T  1448887 ttgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatccattattca 1448816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 17611093 - 17611216
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||| ||||||||||||||||||||||||||| ||| |||| | |||||||||| |||||||||||| | || ||||||| |||||||||| ||    
T  17611093 ttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgat 17611192  T
Q  312 tcatattgaaagatcgattgttca 335  Q
    |||||||||||||| |||| ||||    
T  17611193 tcatattgaaagattgattattca 17611216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 20116499 - 20116673
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| ||||     |||||| ||  ||||||||     
T  20116499 tctttttctatctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatatacatgtggttgtttgttgttcgt 20116597  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||| ||||||||||||| |||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  20116598 cgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 20116673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 26583630 - 26583864
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||| |||||  |||||||||||||||||||||| || ||| || | |||||||| |||  ||||||| |||||  |||||||||||  |||||||     
T  26583630 tctttttatctctatttcaatctaaataagtgatttt-catatatatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttca 26583728  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacgtt 357  Q
     | ||||||||||||||||||||||||| || ||  |||  ||||||||| ||||||||||||||||||||| |||| | |||||    ||| |||||||    
T  26583729 tcgtcttgtgcggcgttgtttgatttccagtcttcgtgcaatgttcatttgattcatattgaaagatcgattattcaatcaaaga----gcgtcaacgtt 26583824  T
Q  358 gcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||| || ||||||  ||||||||||||||||||||    
T  26583825 gcagattcggaggtcatgaatattccggtcactttaattt 26583864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 35496336 - 35496161
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||| ||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  |||||||     
T  35496336 tctttttctctctatttcaatctaattaagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttca 35496238  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||| |||||||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  35496237 tcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 35496161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 163 - 396
Target Start/End: Original strand, 42311199 - 42311435
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||||  ||||||||||||||||||| || ||||||||| | |||||||| |||  ||||||| ||||   ||||||| |||  |||||||| |     
T  42311199 ttttctctctatttcaatctaaataagtgatatt-cacatagatctaggtttttttctttgtgatttcatcatttaagtgtggcggtttgttgttcgtcg 42311297  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gcaacgttgc 359  Q
    |||| ||| |||||||||||||| |||| ||  |||| ||||||||| ||||||||||||||||||||| |||| | ||||| || ||   |||||||||    
T  42311298 tcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacgttgc 42311397  T
Q  360 agattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||| | || ||||||  ||||||||||||||||||||    
T  42311398 agatccggaggtcatggatattccggtcactttaattt 42311435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 46821930 - 46822106
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | ||||||  |||  | ||||| |||||  ||| ||||| |  |||||||    
T  46821930 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttc 46822028  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||    
T  46822029 gtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttca 46822106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 14628040 - 14627801
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||| |||||  |||||||||||||||||||||| |||||| || | |||||||| | |  ||||||| |||||  |||||||||||  ||||||||    
T  14628040 tctttttttctctaattcaatctaaataagtgatttt-cacataaatataggtttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcg 14627942  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 356  Q
     | | |||||||||||||||||||||| ||| ||  | ||||||| |||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||    
T  14627941 tcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 14627842  T
Q  357 tgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||||| || | ||||  |||||| |||||||||||||    
T  14627841 tgcagattcggaggccatgaatattccagtcactttaattt 14627801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 23085437 - 23085612
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||| |||  |||||||||||||| ||| ||| ||||||||| | |||||||| |||  ||||||  |||||  |||||||||||  ||||||||    
T  23085437 tctttttctttctatttcaatctaaataattgacttt-cacatagatctaggtttttttctttgtgattttatcatctaagtgtggtggtttgttgttcg 23085535  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | || |||||||| ||||||| |||||||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  23085536 tcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaagatcgattattca 23085612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 1485417 - 1485243
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | | |||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  1485417 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 1485319  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||| |||||||||| |||||| | || ||||||| ||||||| ||||  ||||||| ||||||| ||||    
T  1485318 cgtcttgtgcagcgttgtttgttttcccatcttcttgcggtattcattttattccaattgaaaaatcgattattca 1485243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 306
Target Start/End: Complemental strand, 23425532 - 23425387
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  ||||||||||||||||||||||| |||||||| | |||||||||||  ||||||| ||||   |||||||||||  ||||||||     
T  23425532 tctttttctctatatttcaatctaaataagtgattttt-acatagatctaggttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgt 23425434  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcat 306  Q
    | |||||||||| | ||||||||||||||| || |||||||||||||    
T  23425433 cgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcat 23425387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 35261229 - 35261452
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 272  Q
    ||||||| |||||||||||||| |||||| |||| | ||||||  |||| |||||||||||||| |||||||| ||| |||||||| | |||  ||| ||    
T  35261229 ttcaatccaaataagtgatttt-cacataaatttagattttttttcttcgtgatttcgtcatccaagtgtggttgtgtgttgttcgtcgtctcctgcagc 35261327  T
Q  273 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagagt 370  Q
     || |||||||| |||| ||  ||| |||||||||| ||||||||| ||||||||||| |||| | ||||| || | || ||| ||||||||| | |||     
T  35261328 attatttgattttccgtctttgtgc-gtgttcatttgattcatattaaaagatcgattattcaatcaaagatttagacgtcaatgttgcagatccggagg 35261426  T
Q  371 catgtgtattccggtcactttaattt 396  Q
    ||||||||||||||||||||||||||    
T  35261427 catgtgtattccggtcactttaattt 35261452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 48207833 - 48207978
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||  ||||||| |||||  ||||||||| |  |||||||| | |||||||| |||     
T  48207833 ttcaatctaaataagtgatttt-cacatagatctatgttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgctgcgc 48207931  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 321  Q
    ||||||||||||||| || ||||||||||||||| |||||| |||||    
T  48207932 tgtttgatttcccgtcttcttgcggtgttcatttgattcattttgaa 48207978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 23786508 - 23786666
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| |||| | || |   |||||||||  ||||| | |||||  |||||||||||  |||||||| | |||| ||||||||    
T  23786508 ttcaatctaaataagtgatttt-cacacatatctaaattttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgt 23786605  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| ||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  23786606 tgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 23786666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 26492281 - 26492456
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| | | |||||| |||  ||||||| |||||  |||||||||||  ||||| ||    
T  26492281 tctttttctctctatttcaatttaaataagtgatttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtccg 26492379  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||| ||||||||||||||||||| ||   ||| ||||||||| |||||||||||||| |||||| ||||    
T  26492380 ccgtcttgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcatttgattcatattgaaaggtcgattattca 26492456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 42408278 - 42408453
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||| || |||||||||| ||| | |||||||| |||  ||||||| ||||   |||||||||||  ||||||||    
T  42408278 tctttttctctttatttcaatctaaataattg-tttttcacatggatctaggtttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcg 42408376  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||| |||||||||||||| |||| ||  |||||| ||||||| ||||||||||||||||||||| ||||    
T  42408377 tcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaaagatcgattattca 42408453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 46338969 - 46339209
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| | | ||||||  |||  | ||||| ||||   ||||||||| |  |||||||    
T  46338969 tctttttctctttatttcaatgtaaataagtgatttt-cacatagatctagcttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttc 46339067  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 355  Q
    | | ||||||||||||||||||||||| |||| ||  | |||||||||||| ||||||||||||||||| |||||||| | ||||| ||  ||| |||||    
T  46339068 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgggcgtcaacg 46339167  T
Q  356 ttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    ||||||||||  || | |||  ||||||||||||||||||||    
T  46339168 ttgcagattcgaaggcaatggatattccggtcactttaattt 46339209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 396
Target Start/End: Original strand, 6558817 - 6559032
Alignment:
Q  185 ataagtgatttttcacatagattttggttttt--tcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgat 282  Q
    |||||||||||| ||||||||||| |||||||  ||||  ||||||| |||||  |||||||||||  |||||||| | |||||| || ||||||| |||    
T  6558817 ataagtgatttt-cacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgat 6558915  T
Q  283 ttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtgtat 379  Q
    ||||||| ||  |||||||||||||| |||||| |||||| ||||||| |||| | ||||| ||  ||| ||||||||||||| | || | ||||  |||    
T  6558916 ttcccgtcttcgtgcggtgttcatttgattcattttgaaaaatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgaatat 6559015  T
Q  380 tccggtcactttaattt 396  Q
    |||||||||||||||||    
T  6559016 tccggtcactttaattt 6559032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 160 - 321
Target Start/End: Complemental strand, 45199192 - 45199032
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  || ||| ||||||||||||||| || |||||| |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  45199192 tctttttctctatattttaatttaaataagtgatttt-catatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 45199094  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 321  Q
    | | |||||||||| ||||||||||||||| || ||||||||||||| | |||||| |||||    
T  45199093 cgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttcatctgattcattttgaa 45199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 183 - 335
Target Start/End: Complemental strand, 17223136 - 17222986
Alignment:
Q  183 aaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgat 282  Q
    |||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  ||||||||| |  |||||||  | ||||||||||||| |||||||    
T  17223136 aaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgat 17223038  T
Q  283 ttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    || || | ||  ||| |||||||||| ||||||||||||||||||||| ||||    
T  17223037 tttccttcttcatgc-gtgttcatttgattcatattgaaagatcgattattca 17222986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 32684675 - 32684759
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  32684675 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaatatcgattattca 32684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 36143782 - 36143875
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg 254  Q
    |||||||||||||  ||||||||||||||||| |||||||| ||||| | |||||||||||| |||||||||| || ||||||||||||| ||||    
T  36143782 tctttttctctctaattcaatctaaataagtg-tttttcacgtagatctaggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgttg 36143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 34773729 - 34773802
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||| |||||||||||||||||||| || || ||||||||||||||| |||||||||||||||||||| |||||    
T  34773729 tcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatcgatcgttca 34773802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 2843290 - 2843227
Alignment:
Q  272 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  2843290 cgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 2843227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 433853 - 433677
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtgg-tggtgcgttgttc 257  Q
    |||||||||||||  |||||||||||||| ||| ||| ||||||||| | | |||||| |||  ||||||| |||||  ||||||| ||||  |||||||    
T  433853 tctttttctctctatttcaatctaaataaatgacttt-cacatagatctagatttttttctttgtgatttcatcatctaagtgtgggtggtttgttgttc 433755  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |   |||||||| |||||||||| |||| ||| || || | |||||||||| |||| |||||||||||||||| ||||    
T  433754 gttgtcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttattcctattgaaagatcgattattca 433677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 21266308 - 21266481
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||  |||||||  ||||||| |||||  |||||||||||  ||| ||||     
T  21266308 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctagg-gttttctttttgatttcatcatctaagtgtggtggtttgttattcgt 21266405  T
Q  260 catcttgtgcggc-gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||| |  || ||| |||| |||| || ||||||||||||| | |||||||||| |||||||||| ||||    
T  21266406 cgtcttgtgcgacatttttttaattttccgtcttcttgcggtgttcatctgattcatattg-aagatcgattattca 21266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 24069485 - 24069425
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||||||| ||||||||  |||||||||||||||||| ||| |||||||||||||    
T  24069485 tcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaa 24069425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 330
Target Start/End: Original strand, 20083301 - 20083424
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg-----ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcat 306  Q
    ||||||||||||||||||| ||||  |||||| ||||| ||||     || | | ||||||| | |||||||||||||||||| |||||||||||||||     
T  20083301 ttttttcttcatgatttcgacatctaagtgtgatggtgtgttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttcag 20083400  T
Q  307 ttaattcatattgaaagatcgatt 330  Q
    ||  || || ||||||||||||||    
T  20083401 ttgttttattttgaaagatcgatt 20083424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 314
Target Start/End: Complemental strand, 17499799 - 17499666
Alignment:
Q  180 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 279  Q
    ||||||||||| ||||| |||| |||| | ||||||||| |  ||||||| |||||  ||||| ||||||  ||||||  | ||||||||| | ||||||    
T  17499799 tctaaataagttatttt-cacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgttt 17499701  T
Q  280 gatttcccgtattgttgcggtgttcatttaattca 314  Q
    ||||| |||| |||||||||| ||||||| |||||    
T  17499700 gattttccgtcttgttgcggtattcatttgattca 17499666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 314
Target Start/End: Original strand, 17553415 - 17553548
Alignment:
Q  180 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 279  Q
    ||||||||||| ||||| |||| |||| | ||||||||| |  ||||||| |||||  ||||| ||||||  ||||||  | ||||||||| | ||||||    
T  17553415 tctaaataagttatttt-cacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgttt 17553513  T
Q  280 gatttcccgtattgttgcggtgttcatttaattca 314  Q
    ||||| |||| |||||||||| ||||||| |||||    
T  17553514 gattttccgtcttgttgcggtattcatttgattca 17553548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 253 - 335
Target Start/End: Original strand, 19560007 - 19560089
Alignment:
Q  253 tgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||| | |||||||||||||||||||||||| | | || |||  |||||||||| |||||||||||||||| |||| ||||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaaagattgattattca 19560089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 969588 - 969478
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||| ||||||| || |  || ||||| | || |||||||| | |||| ||||||||||||||||||  ||| || ||||||||||  |||  |    
T  969588 ttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggt 969489  T
Q  312 tcatattgaaa 322  Q
    |||||||||||    
T  969488 tcatattgaaa 969478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 326
Target Start/End: Complemental strand, 3224547 - 3224437
Alignment:
Q  216 ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcat 315  Q
    ||||||||||||||||| || ||| |  ||| || ||||||||   ||||||||| | || ||||||||| ||| |||||||| ||||| |||  |||||    
T  3224547 ttcttcatgatttcgtcgtctgagggctgtgttgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcat 3224448  T
Q  316 attgaaagatc 326  Q
    |||||| ||||    
T  3224447 attgaaggatc 3224437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 43369908 - 43369855
Alignment:
Q  178 aatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtc 232  Q
    ||||||||||||||||||| ||||||||| |  ||||||||||| ||||||||||    
T  43369908 aatctaaataagtgatttt-cacatagatataagttttttcttcgtgatttcgtc 43369855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 2843388 - 2843332
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 217  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||    
T  2843388 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 2843332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 229
Target Start/End: Original strand, 3860868 - 3860935
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttc 229  Q
    ||||||||||| |  |||||| ||||||||||| ||||||||||||| |||| ||||||||| |||||||    
T  3860868 tctttttctctttgtttcaatataaataagtga-ttttcacatagatcttgg-tttttcttcgtgatttc 3860935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Original strand, 32684604 - 32684656
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttt 216  Q
    ||||||||||  |||||||||||||||||| ||||||||||||| | |||||||    
T  32684604 ttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttt 32684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 3267289 - 3267237
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| || |  |||||||| |||||||||||||||||||||||    
T  3267289 gtttgatttcgcgtcttatcacggtgttcgtttaattcatattgaaagatcga 3267237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 9977283 - 9977231
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| |||| |||||| ||||||| ||| ||||||||||||||    
T  9977283 gtttgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcga 9977231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 123; Significance: 4e-63; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 18569471 - 18569233
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttt-ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||| |||||| ||||||||||||  ||||||||||||| ||||||||    
T  18569471 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttcttcttcgtgatttcgtcatttgagtgtggtggtgtgttgttcg 18569373  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacg 355  Q
     |||||||| ||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| || ||| ||||| |   |||||    
T  18569372 tcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaaagatcgattattcaattgaag-atttgggtgtcaacg 18569274  T
Q  356 ttgcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    |||||||| ||||| |||| |||||||||||||||||||||    
T  18569273 ttgcagatccagaggcatgggtattccggtcactttaattt 18569233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 39987310 - 39987547
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||||||||||||||||||||||||| |||||| | | |||||||||| |||||||  ||||||||||||||||||  |||||||     
T  39987310 tctttttctctctgattcaatctaaataagtgatttttcatatagatctag-ttttttcttcgtgatttcaccatccgagtgtggtggtgtattgttcgt 39987408  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 357  Q
    | ||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||| |||| | ||||||||  ||| |||||||    
T  39987409 cgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagaattgggcgtcaacgtt 39987508  T
Q  358 gcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    |||||| | ||| |||| |||||||||||||||||||||    
T  39987509 gcagatccggaggcatgggtattccggtcactttaattt 39987547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 161 - 335
Target Start/End: Original strand, 34519054 - 34519227
Alignment:
Q  161 ctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    ||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |    
T  34519054 ctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtc 34519152  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||||||| ||| || ||| ||||||||||| ||||||||||||||||||||| ||||    
T  34519153 gttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaaagatcgattattca 34519227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 25406445 - 25406206
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  |||||||||||||  |||||||||||   |||||||    
T  25406445 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcgtcatctaagtgtggtggtttattgttcg 25406347  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgt 356  Q
     | ||||||| ||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| |||| | ||||| || | || ||||||    
T  25406346 tcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttcgacgtcaacgt 25406247  T
Q  357 tgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||| |||| ||||||  ||||||||| ||||||||||    
T  25406246 tgcagatccagaggtcatggatattccggtgactttaattt 25406206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 28035059 - 28035234
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  28035059 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 28035157  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||||||||||||| ||  | |||||||||||| ||||||||||||||||||||| ||||    
T  28035158 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaaagatcgattattca 28035234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 212 - 327
Target Start/End: Complemental strand, 39927663 - 39927548
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||| | ||||||| |||||||||||||||||||| ||||||||||||||||||  |    
T  39927663 ttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtt 39927564  T
Q  312 tcatattgaaagatcg 327  Q
    ||||||||||||||||    
T  39927563 tcatattgaaagatcg 39927548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 9919309 - 9919484
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  ||||||||||||||||||||||| |||||||| | || |||||||||  |||||||  ||||  |||||||||||  ||||||||    
T  9919309 tctttttctctctatttcaatctaaataagtgattttt-acatagatctatgtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttcg 9919407  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||| |||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9919408 tcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 9919484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 51868806 - 51868631
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  51868806 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 51868708  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||| ||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  51868707 tcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatcgattattca 51868631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 5324718 - 5324544
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||||||| ||| || ||||  |||||| |||  ||||||| |||||  |||||||||||  ||||||||     
T  5324718 tctttttctctctatttcaatctaaataagtgatttt-cacgtaaatttaagtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgc 5324620  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||||  |||||||||||||||| || ||||||||||||||| ||||||||||||| ||||||| ||||    
T  5324619 cgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaaaatcgattattca 5324544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 38520694 - 38520457
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||| |||||||||||||||||| ||||||||| |  ||||||||||| ||||||| |||||  || ||||||||  ||||||||     
T  38520694 tctttttctctctatttcgatctaaataagtgatttt-cacatagatctatgttttttcttcgtgatttcatcatctaagagtggtggtttgttgttcgt 38520596  T
Q  260 catc---ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacg 355  Q
    | ||   ||||| ||||||||||||||||||||||| || |||||||||| | ||||||||||||||||||||| || | | ||  | | |||| |||||    
T  38520595 cgtcgtcttgtgtggcgttgtttgatttcccgtattcttacggtgttcatctgattcatattgaaagatcgattattaaatcaa--attgtgcgtcaacg 38520498  T
Q  356 ttgcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    |||||||||| ||| ||||  |||||| |||||||||||||    
T  38520497 ttgcagattcggaggcatggatattccagtcactttaattt 38520457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 51871784 - 51871958
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | | |||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  51871784 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctagcttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 51871882  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||| ||||||||| ||| |||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  51871883 cgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatcgattattca 51871958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 3871344 - 3871567
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| |  ||||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||| ||||    
T  3871344 ttcaatctaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcagcgt 3871442  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcata-ttgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcaga-g 369  Q
    ||||||||||||||| || ||||||||||| ||| ||| ||| |||||||||||||| |||| | |||| ||||| |   ||||||||||||| |||| |    
T  3871443 tgtttgatttcccgtcttcttgcggtgttc-tttgatttatatttgaaagatcgattattcaatcaaag-atttgggtgtcaacgttgcagatccagagg 3871540  T
Q  370 tcatgtgtattccggtcactttaattt 396  Q
    |||||| |||| |||||||| ||||||    
T  3871541 tcatgtatatttcggtcactataattt 3871567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 5701177 - 5701418
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 256  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| | |||||||| ||| |    ||||| |||||  ||||||||| |  ||||||    
T  5701177 tctttttctctttatttcaatttaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtt 5701275  T
Q  257 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caa 353  Q
    || | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| |||||||||||| | |||| ||||| |   |||    
T  5701276 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattgttcaatcaaag-atttgggcatcaa 5701374  T
Q  354 cgttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    |||||||||| | ||| | |||  ||||||||||||||||||||    
T  5701375 cgttgcagatccggagacaatggatattccggtcactttaattt 5701418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 223 - 396
Target Start/End: Complemental strand, 9687302 - 9687127
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    ||||||| |||||  |||||||||||  |||||||| |||||||||||||||||||||||||||| | || ||||||||||||||| |||||||||||||    
T  9687302 tgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcatattgaaa 9687203  T
Q  323 gatcgattgttcagttaaagaatt-tgcgcaacgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||| |||| | ||||| ||  |||  | ||||||||| |||| | ||||  ||||||||||||||||||||    
T  9687202 gatcgattattcaatcaaagatttgggcgtcaagttgcagatccagaggccatgaatattccggtcactttaattt 9687127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 343
Target Start/End: Original strand, 27872659 - 27872841
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||| ||||  |||||||||||||||||||||| ||||||||| |  ||||||||||| ||||| | |||||  |||||||||||  ||||||||     
T  27872659 tctttttcgctctatttcaatctaaataagtgatttt-cacatagatctaagttttttcttcgtgattgcatcatctaagtgtggtggtttgttgttcgt 27872757  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaaga 343  Q
    | |||||| || |||||||||||||   || || ||||||||||||||||||||| |||||| |||||||| |||| |||||||    
T  27872758 cgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattcaaattgaaggatcgattattcaattaaaga 27872841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 11453854 - 11454030
Alignment:
Q  160 tctttttctctctcg--ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||||||   ||||||||||||||||| |||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||    
T  11453854 tctttttctctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 11453952  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||| ||| ||||||||||||||| || ||||||| ||||||| |||||| |||||||| ||||| ||||    
T  11453953 gtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattcatttgattcatcttgaaagagcgattattca 11454030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 19716058 - 19715817
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttctt-catg---atttcgtcatccgagtgtggtggtgcgttgt 255  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| |||||||| || |||    ||||| |||||  ||||||||| |  |||||    
T  19716058 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttaggttttttttttcattgtaatttcatcatctaagtgtggtgatt-gttgt 19715961  T
Q  256 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caa 353  Q
    ||| | |||||||| ||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||| | | ||||| ||  ||| |||    
T  19715960 tcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttaaatcaaagatttgggcgtcaa 19715861  T
Q  354 cgttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    ||||||||||  |||| | |||  ||||||||||||||||||||    
T  19715860 cgttgcagatctagaggcaatggatattccggtcactttaattt 19715817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 210 - 335
Target Start/End: Complemental strand, 48365876 - 48365751
Alignment:
Q  210 ggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcattta 309  Q
    |||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||  |||||||||||||   || |||| |||||||||||||     
T  48365876 ggttttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttg 48365777  T
Q  310 attcatattgaaagatcgattgttca 335  Q
    |||||||||||| |||||||| ||||    
T  48365776 attcatattgaaggatcgattattca 48365751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 50166260 - 50166085
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||| |||  |||||||||||||||||| ||| ||||||||||| |||||||| ||   ||||||| |||||  |||||||||||  ||||||||    
T  50166260 tctttttctatctatttcaatctaaataagtgaattt-cacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggtttgttgttcg 50166162  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||| |||| |||| ||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  50166161 tcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 50166085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 396
Target Start/End: Original strand, 31836745 - 31836965
Alignment:
Q  179 atctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttg 276  Q
    |||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | |||||||||| ||||    
T  31836745 atctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttg 31836843  T
Q  277 tttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtcatg 374  Q
    ||||||||||||| ||  |||||||||||||| ||||||||||||| |||||||||||| | ||||| ||  ||| ||||||||||||  | |||  |||    
T  31836844 tttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattgttcaatcaaagatttgagcgtcaacgttgcagaaccggagcaatg 31836943  T
Q  375 tgtattccggtcactttaattt 396  Q
      ||||||||||||||||||||    
T  31836944 gatattccggtcactttaattt 31836965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 7342657 - 7342817
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 273  Q
    |||||||||||||||||| |||| || ||||| | || |||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||||||    
T  7342657 ttcaatctaaataagtgactttt-acgtagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcg 7342755  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||| |||||||| || ||||| ||||||||| |||| |||||||||||||||| ||||    
T  7342756 ttgtttgttttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattattca 7342817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 7997707 - 7997884
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 256  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||| | |||||||| ||| |    ||||| |||||  ||||||||| |  ||||||    
T  7997707 tctttttctctttatttcaatataaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaagtgtggtgatttgttgtt 7997805  T
Q  257 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    || | |||||||||||||||||||||||||||| ||  ||| |||||||||| ||||||||||||| ||||||||||||    
T  7997806 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaatatcgattgttca 7997884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 326
Target Start/End: Original strand, 44637357 - 44637507
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||| ||||| |  |||| |||||  |||||||||||||  | ||||||| || ||||||||   ||||||||| |||    
T  44637357 ttcaatctaaataagtgatttt-cacgtagatctaagtttcttctttgtgatttcgtcatctaaatgtggtgatgtgttgttcgtagtcttgtgcgacgt 44637455  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||| |||||||| ||||| |||||||||||| |||||||||||||||||    
T  44637456 tgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatc 44637507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 35584782 - 35584604
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgt 255  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||    |||  | ||||  | |||  ||||||||| |  |||||    
T  35584782 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtaattttataatctaagtgtggtgatttgttgt 35584684  T
Q  256 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  35584683 tcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 35584604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 40881174 - 40880999
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatga--tttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||||||||| ||||||||| ||| ||||| | |||||||| ||  |||  |||| |||||  |||||||||||  |||||||    
T  40881174 tctttttctctctatttcaatctaaatgagtgatttt-cacttagatctaggttttttttttttgagatttcatcatctaagtgtggtggtttgttgttc 40881076  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||| ||||||| ||||    
T  40881075 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt-aaaaatcgattattca 40880999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 335
Target Start/End: Original strand, 9172410 - 9172585
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatg--atttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||| |||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||  ||||  |||||  |||||||||||  ||||||||    
T  9172410 tttttttctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcg 9172508  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9172509 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 9172585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 162 - 335
Target Start/End: Original strand, 9180392 - 9180567
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatg--atttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||| |||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||  ||||  |||||  |||||||||||  ||||||||    
T  9180392 tttttttctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgtgattttatcatctaagtgtggtggtttgttgttcg 9180490  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9180491 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattca 9180567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 45426223 - 45426052
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  || ||||||||||||||||||| ||||||||| |  |||||||  |   |||||| |||||  |||||||||||  ||||||||     
T  45426223 tctttttctctctatttaaatctaaataagtgatttt-cacatagatctaagtttttttgt---gatttcatcatctaagtgtggtggtttgttgttcgt 45426128  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||||||||||||||||||| |  |  |||||||||||||| |||||||| |||||||||||| ||||    
T  45426127 cgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttcatttgattcatatcgaaagatcgattattca 45426052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 14545440 - 14545612
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  14545440 tctttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 14545538  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||| || ||||||| ||||||| || ||||||||||||| | ||| || ||| |||||||||| ||||    
T  14545539 cgtcttgtgcgacgctgtttga-ttcccgtcttcttgcggtgttcatctgatttattttg-aagatcgattattca 14545612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 41081849 - 41081626
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    ||||||||| |||||||||||  | ||||||| | ||||||||| || ||| ||||||||||||||||||||||| |||||||  |  ||||||||||||    
T  41081849 ttcaatctatataagtgatttg-cgcatagatctaggttttttcatcgtgacttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgt 41081751  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattg-aaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcagagt 370  Q
    ||||| |||||  |  ||||||| |||||||| | |||||||||| ||||||||||| |||| | ||| ||| || |   ||| ||||||||| | |||     
T  41081750 tgtttaatttcatgccttgttgcagtgttcatatgattcatattgaaaagatcgattattcaatcaaa-aatctgagcatcaatgttgcagatccggagg 41081652  T
Q  371 catgtgtattccggtcactttaattt 396  Q
    ||||||||||| ||||| ||||||||    
T  41081651 catgtgtattctggtcattttaattt 41081626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 329
Target Start/End: Complemental strand, 7312259 - 7312097
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||  ||||||| ||||||| ||| ||||| | |||||||||||| ||||||||| |||  |||||||||||| |||||||      
T  7312259 tctttttctctctatttcaaattaaataaatgatttt-cacgtagatctaggttttttcttcgtgatttcgt-atctaagtgtggtggtgtgttgttcat 7312162  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 329  Q
      |||||||     ||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||    
T  7312161 tgtcttgtg-----ttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgat 7312097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 20266222 - 20266397
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  20266222 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 20266320  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||| ||  |||||||||||||||| ||  |||||||  ||||| ||||||||||||||||||||||||||    
T  20266321 tcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattcatattgaaagatcgattgttca 20266397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 162 - 325
Target Start/End: Complemental strand, 33291577 - 33291414
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    ||||||| |||  |||||| ||||||||||||||| |||||| || | || |||||||||  ||||||| |||||  |||||||||||  |||||||| |    
T  33291577 tttttctttctatttcaatataaataagtgatttt-cacataaatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 33291479  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
     |||||||||| |||||||||||| ||||  |  |||||||||||||| ||||||||||||||||    
T  33291478 gtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 33291414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 50272301 - 50272126
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| |  ||||||| |||  ||||||| || ||  ||| ||||| |  ||||||||    
T  50272301 tctttttctctttatttcaatctaaataagtaatttt-cacatagatctaagtttttttctttgtgatttcatcttctaagtttggtgatttgttgttcg 50272203  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | | |||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  50272202 tcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaaaatcgattattca 50272126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 30878995 - 30879170
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  || ||||||||||||||||||| ||||||||| |  |||||||  |||  | ||||| ||||   ||||||||| |  |||||||    
T  30878995 tctttttctctttattttaatctaaataagtgatttt-cacatagatctatgttttttttctttgtaatttcatcatttaagtgtggtgatttgttgttc 30879093  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||||| ||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  30879094 gtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 30879170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 50148392 - 50148465
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||| | |||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  50148392 tcttgtgcgacattgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 50148465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 289
Target Start/End: Original strand, 19723256 - 19723382
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  |||||||| |    
T  19723256 tttttctctcta-ttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 19723353  T
Q  261 atcttgtgcggcgttgtttgatttcccgt 289  Q
     |||| |||||||||||||||||| ||||    
T  19723354 gtcttctgcggcgttgtttgattttccgt 19723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 30818506 - 30818337
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||| |||||||||| || | | |||||| ||  ||||||| |||||  |||||||||||  ||||||||     
T  30818506 tctttttctctctatttcaatctaaataagtga-ttttcacataaatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcgt 30818408  T
Q  260 catcttgtgcggcgttgtttgatttcccgt-attgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||     |||||||||| |||||| |||| |||||||||||||| |||| ||| |||||||||||| ||||    
T  30818407 cgtcttgt-----gttgtttgatctcccgtcattg-tgcggtgttcatttgattcttatcgaaagatcgattattca 30818337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 47132865 - 47132968
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || ||||| || | || |||||||| | | |||||||||||||||| ||||| ||| |||||||||||||| |||  ||||||||||||    
T  47132865 tgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaa 47132964  T
Q  323 gatc 326  Q
    ||||    
T  47132965 gatc 47132968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 12635160 - 12635235
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| | |||||||||||||||||||||||  ||| |||| | |||||||||||  ||||||||||||||||    
T  12635160 gttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatc 12635235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 16262823 - 16262922
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||| ||| || |||||||| | ||||||||| |   | |||||||||||||||||||||| ||| |||||| ||||||| ||| |||||||||||||    
T  16262823 tgattttgtcgtctgagtgtggcgatgcgttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaa 16262922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 329
Target Start/End: Original strand, 40646700 - 40646759
Alignment:
Q  270 ggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 329  Q
    |||||||||||||||||||| ||  ||||||||| |||| ||||||||||||||||||||    
T  40646700 ggcgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaaagatcgat 40646759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 33817263 - 33817167
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||   ||||| | | |||| ||| ||||||||||||||| ||| || || |||||||||||| ||||||||||||||||||||| ||||    
T  33817263 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtctt-tttcggtgttcatttgattcatattgaaagatcgattattca 33817167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 33876733 - 33876637
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||   ||||| | | |||| ||| ||||||||||||||| ||| || || |||||||||||| ||||||||||||||||||||| ||||    
T  33876733 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtctt-tttcggtgttcatttgattcatattgaaagatcgattattca 33876637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 29837694 - 29837635
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaa 310  Q
    |||||||||  ||||||||| |||||||||||||||||| |||||||||  |||||||||    
T  29837694 gttgttcgatgtcttgtgcgacgttgtttgatttcccgtcttgttgcggcattcatttaa 29837635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 45805877 - 45805814
Alignment:
Q  272 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||| ||||    
T  45805877 cgttgtttgctttcccgtcttcttgcggtgttcatttcattccgattgaaagatcgattattca 45805814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 285
Target Start/End: Complemental strand, 32679242 - 32679163
Alignment:
Q  205 attttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttc 285  Q
    ||||||||||||| ||| ||||||| || || ||||| || | || |||||||| ||||||||||||||| ||||||||||    
T  32679242 attttggtttttt-ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttc 32679163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 36882892 - 36882960
Alignment:
Q  7 tagaaaaatagcaagaaatgctattttctctgatggacattggagaattgaggttaaggatcctagaag 75  Q
    |||||||| |||||||||||||| |||   |||||| |||||||  ||| |||||||||||||||||||    
T  36882892 tagaaaaagagcaagaaatgctaatttgagtgatgggcattggaagattaaggttaaggatcctagaag 36882960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 328
Target Start/End: Original strand, 14872633 - 14872706
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||| | ||||||||||||||   ||||||| ||| |||| |||||||||||||| ||| ||||||||||||||    
T  14872633 gttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttagttc-tattgaaagatcga 14872706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 49626904 - 49626978
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| | |||||||||||||||||||||||  | | ||||||||||||||  ||  ||||||||||||||||    
T  49626904 gttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttc-gttggttcatattgaaagatc 49626978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 25728120 - 25728064
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 217  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||    
T  25728120 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Complemental strand, 799888 - 799812
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 327  Q
    |||||| | |||||||||| | ||||||||| ||   || || |||||||||||||||  |||||||||||||||||    
T  799888 gttgtttgtcatcttgtgcagtgttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatcg 799812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 340
Target Start/End: Original strand, 5855922 - 5856002
Alignment:
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaa 340  Q
    ||||||||||| | |||||||||||  ||| |||||| |||||| ||||  ||  |||| ||||||| |||||||||||||    
T  5855922 catcttgtgcgacattgtttgattttacgtcttgttgtggtgtttattttgtttttattaaaagatcaattgttcagttaa 5856002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 27456555 - 27456607
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| |||| ||||||||| |||| ||| ||||||||||||||    
T  27456555 gtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcga 27456607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 241
Target Start/End: Complemental strand, 30558813 - 30558736
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtg 241  Q
    ||||||| |||  ||||||||||| |||||||||  |||| |||| | ||||||||||| |||||||| ||||| |||||    
T  30558813 tttttctttctatttcaatctaaaaaagtgattt--cacacagatctaggttttttctttatgatttcatcatctgagtg 30558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 41994428 - 41994492
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| |||||||||||||||   | |||||| ||||||| |||  ||||||||||||||||    
T  41994428 tcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatc 41994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 6e-56; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 35965136 - 35964898
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||||| ||||||||     
T  35965136 tctttttctctctatttcaatctgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgt 35965037  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgtt 357  Q
    | || |||| |||||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||||||| |||| | ||||| || | || |||||||    
T  35965036 cgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatattaaaagatcgattattcaatcaaagatttggacgtcaacgtt 35964937  T
Q  358 gcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    |||||| | ||| |||| ||||| | |||||||||||||    
T  35964936 gcagatccggaggcatgagtatttcagtcactttaattt 35964898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 163 - 335
Target Start/End: Complemental strand, 18139071 - 18138899
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  ||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||| | ||||||||||||| |||||||| | |    
T  18139071 ttttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgt 18138972  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||||||||| || | ||||||| |||||||||| |||  |||||||||||||||| ||||    
T  18138971 cttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattca 18138899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 163 - 335
Target Start/End: Complemental strand, 49126284 - 49126112
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  ||||||||||||||||||||||||||||| || | ||||||||||| |||||||||||| | ||||||||||||| |||||||| | |    
T  49126284 ttttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtggtggtgtgttgttcgtcgt 49126185  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||||||||| || | ||||||| |||||||||| |||  |||||||||||||||| ||||    
T  49126184 cttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatcgattattca 49126112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 51317914 - 51318152
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  ||||||||| |  ||||||||     
T  51317914 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtgatttgttgttcgt 51318012  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 356  Q
    | ||||||||||| |||||||||||||||| || |||||||||| |||| |||||||||||||||| |||||||||  | || |||||| |   ||||||    
T  51318013 cgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaaagattgattgttca-atcaacaatttgggcgtcaacgt 51318111  T
Q  357 tgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||| | || ||||||  ||||||||||||||||||||    
T  51318112 tgcagatccggaggtcatggatattccggtcactttaattt 51318152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 175 - 346
Target Start/End: Original strand, 2624441 - 2624611
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 273  Q
    |||||||||||||||||||||| ||||||||| | |||||||| |||| ||||||||||||  ||||||||||||| |||||||| | ||||||||||||    
T  2624441 ttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcgtgatttcgtcat--gagtgtggtggtgtgttgttcgtcgtcttgtgcggcg 2624537  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga-tcgattgttcagttaaagaatt 346  Q
    | |||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||| |||| | ||||||||    
T  2624538 tagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagattcgattattcaatcaaagaatt 2624611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 164 - 396
Target Start/End: Complemental strand, 46991287 - 46991053
Alignment:
Q  164 tttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    |||||||||  |||||||||||| ||||||||| ||||||||| | | |||||| ||||||||||| |||||| ||||||||||||| |||||| | | |    
T  46991287 tttctctctatttcaatctaaatgagtgatttt-cacatagatctagatttttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgt 46991189  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgc 359  Q
    ||| || |||||||||||||||||| | |||||||||||||||||| ||||||||||||| ||||||| |||| | |||| ||||| |   |||||||||    
T  46991188 cttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaaatatcgattattcaatcaaag-atttgggtgtcaacgttgc 46991090  T
Q  360 agattcagagtcatgtgtattccggtcactttaattt 396  Q
    ||||  |||| ||| ||||| ||| ||||||||||||    
T  46991089 agatctagagacatatgtatcccgatcactttaattt 46991053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 10389914 - 10389740
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | ||||||||| |  ||||||| |||||  |||||||||||  ||||||||     
T  10389914 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttccttttgatttcatcatctaagtgtggtggtttgttgttcgt 10389816  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||| ||||||| ||||    
T  10389815 cgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaatatcgattattca 10389740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 163 - 396
Target Start/End: Original strand, 25273811 - 25274050
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||    |||  ||||||| |||||  |||||||||||  ||||||||    
T  25273811 ttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 25273909  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacg 355  Q
     | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||| |||||| |   |||||    
T  25273910 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaa-aatttgggcgtcaacg 25274008  T
Q  356 ttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||| | || | ||||  ||||||||||||||||||||    
T  25274009 ttgcagatccggaggccatggatattccggtcactttaattt 25274050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 4643786 - 4643961
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| | |   |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  4643786 tctttttctctctatttcaatctaaataagtga--tttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 4643883  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  4643884 gtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatcgattattca 4643961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 9529039 - 9528799
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| |||||||||||  |||||||  |||  ||||||| |||||  |||||| ||||  |||||||    
T  9529039 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttatgttttttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 9528941  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gcaacg 355  Q
    | | |||||||||||||||||||||||||||| ||  |||| ||||||||| ||||||||||||||||||||| |||| | ||||| || ||   |||||    
T  9528940 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtcaacg 9528841  T
Q  356 ttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||||   || ||||||  ||||||||||||||||||||    
T  9528840 ttgcagatctggaggtcatggatattccggtcactttaattt 9528799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 10359707 - 10359533
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||| ||||||||||||||||||  ||||| || | |||||||||||| ||||||| |||||  |||||||||||  ||||||||     
T  10359707 tctttttctctctatttcgatctaaataagtgatttta-acatatatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgc 10359609  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||| ||||| ||||||||||||||||| || ||| ||||||||||| ||||||||||||||||||||| ||||    
T  10359608 cgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattcatattgaaagatcgattattca 10359533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 196 - 396
Target Start/End: Complemental strand, 27593952 - 27593751
Alignment:
Q  196 ttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgtt 295  Q
    ||||||||||| |   |||||||||| ||||||||| ||| ||||||||||||| |||||||| ||||||||||| | || ||||||||||||| || ||    
T  27593952 ttcacatagatctatattttttcttcgtgatttcgttatctgagtgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtcttttt 27593853  T
Q  296 gcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacgttgcagattcagagtcatgtgtattccggtcactttaat 394  Q
    ||| |||| |||||||||||||||||||||||||| |||| | ||||| || | | |||| ||||||||   ||| |||| ||||||| |||||||||||    
T  27593852 gcgatgtttatttaattcatattgaaagatcgattattcaataaaagatttggagtcaacattgcagatctggagccatgagtattcctgtcactttaat 27593753  T
Q  395 tt 396  Q
    ||    
T  27593752 tt 27593751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 177 - 326
Target Start/End: Original strand, 35261137 - 35261285
Alignment:
Q  177 caatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttg 276  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| ||||||  |||||  |||||||||||| |||||| | | |||| ||||||||||    
T  35261137 caatctaaataagtgatttt-cacatagatttaggttttttcttcgtgatttgatcatctaagtgtggtggtgtgttgtttgtcgtcttctgcggcgttg 35261235  T
Q  277 tttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| |||| || ||||||||||||||| ||||||||| |||||||    
T  35261236 tttgattttccgtcttcttgcggtgttcatttgattcatattaaaagatc 35261285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 12265398 - 12265557
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||||||||||||| | |||||| ||| | |||||| |||||| |||||||| |||  |||||||| | || ||||||||||    
T  12265398 ttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgattttgtcatctgagtgtggcggtttgttgttcgtcgtc-tgtgcggcgt 12265496  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| ||||| |||| |||||||| || ||||||||||||||||| ||| ||||    
T  12265497 tgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaaagatcaattattca 12265557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 38706871 - 38706696
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  38706871 tctttttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 38706773  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||| ||||||||| ||||||||| ||  ||||||||| |||| ||| ||||||||||||||||| ||||    
T  38706772 tcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattgaaagatcgattattca 38706696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 53616797 - 53616572
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 272  Q
    |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | |||||||||||    
T  53616797 ttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggc 53616699  T
Q  273 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagt 370  Q
    ||||||||||||||||| ||  |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||  ||| ||||||||||||| | |||     
T  53616698 gttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcaattgttcaatcaaagatttgggcgtcaacgttgcagatccggagg 53616599  T
Q  371 c-atgtgtattccggtcactttaattt 396  Q
    | |||  ||||||||||||||||||||    
T  53616598 caatggatattccggtcactttaattt 53616572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 330
Target Start/End: Original strand, 56194527 - 56194699
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcat---gatttcgtcatccgagtgtggtggtgcgttgtt 256  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| ||| |   |||||| |||||  |||||||||||  ||||||    
T  56194527 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtt 56194625  T
Q  257 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
    || | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| ||||||||||||||||    
T  56194626 cgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgatt 56194699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 29965577 - 29965802
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 272  Q
    |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | |||||||||||    
T  29965577 ttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggc 29965675  T
Q  273 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcaga- 368  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||||||| ||||||||| | |||| ||||| |   ||||||||||||| | ||     
T  29965676 gttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagattgattgttcaatcaaag-atttgggcatcaacgttgcagatccggag 29965774  T
Q  369 gtcatgtgtattccggtcactttaattt 396  Q
    || |||  ||||||||||||||||||||    
T  29965775 gtaatggatattccggtcactttaattt 29965802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 868107 - 868265
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||| ||||| ||||||||| | | ||||| |||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||    
T  868107 ttcaatctaaataagttatttt-cacatagatctagattttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 868204  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||| ||||    
T  868205 tgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcaattattca 868265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 31381832 - 31381658
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  31381832 tctttttctctctttttcaatttaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 31381734  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||| |||||||||||||| |||| ||  ||||||||| |||| ||||||||| ||||||||||| ||||    
T  31381733 cgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttgattcatattaaaagatcgattattca 31381658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 3336302 - 3336142
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcgg-cg 273  Q
    ||||||||||| |||| ||||| |||||  || | |||||||||||| |||||| |||||| ||||||||||||| |||||||| | || ||||||| ||    
T  3336302 ttcaatctaaacaagttatttt-cacatctatctaggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacg 3336204  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| || | |||||||||||||||||| |||||||||||||||| |||| ||||    
T  3336203 ttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagattgattattca 3336142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 21090081 - 21090241
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||  | | |||||||  ||||||||     
T  21090081 tctttttctctctatttcaatataaataagtgatttt-cacatagatttaggttttttcttcgtgatttcatcatctaaatatggtggtttgttgttcgt 21090179  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 321  Q
    | |||||| || |||||||||||||  ||| || ||||||||||||||| ||||||||||||    
T  21090180 cgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaa 21090241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 43444321 - 43444496
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||||||| |||||| || | |||||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  43444321 tctttttctctttatttcaatctaaataagtgatttt-cacatatatctaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 43444419  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||||||| |||| |   |||||||||||||| ||||||||||||||||||||||||||    
T  43444420 tcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatcgattgttca 43444496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 8009520 - 8009347
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  8009520 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctag-ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 8009423  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||||||||||||||||||||| ||  | |||||||||||| |||| ||  ||||||| |||| ||||    
T  8009422 cgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattcttacagaaagattgattattca 8009347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 34024597 - 34024424
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||| ||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  34024597 tctttttctctctatttcaatctaaataagttatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgt 34024499  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||  | ||||||||||||| || | || ||||||||||| ||| ||||||||||||||||||||| ||||    
T  34024498 cgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttgattcatattgaaagatcgattattca 34024424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 50766670 - 50766434
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||| ||||||| ||||||||| |  ||||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  50766670 tctttttctctttatttcaatctaaataaatgatttt-cacatagatctaagtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 50766572  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 356  Q
       |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||| |||||||| | ||||| ||  ||| ||||||    
T  50766571 ---tcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatctattgttcaatcaaagatttgagcgtcaacgt 50766475  T
Q  357 tgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    ||||||| | ||| | |||  ||||||||||||||||||||    
T  50766474 tgcagatccggaggcaatggatattccggtcactttaattt 50766434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 9283854 - 9284014
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttc-ttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 273  Q
    ||||||||||||||||||||||| |||||||| | ||||||||  ||  | ||||| |||||  ||||||||| |  |||||| | | ||||||| ||||    
T  9283854 ttcaatctaaataagtgattttt-acatagatctaggtttttttatttgtaatttcatcatctaagtgtggtgatttgttgtttgtcgtcttgtgtggcg 9283952  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  9283953 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 9284014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 335
Target Start/End: Complemental strand, 43154179 - 43154000
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagat--------tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg 254  Q
    ||||||||||  |||||||||||||||||||||| |||||||||        ||| ||||||||||  ||||||  ||||   |||||||||||  ||||    
T  43154179 ttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttgttttttctttgtgattttatcatttaagtgtggtggtttgttg 43154081  T
Q  255 ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||| | ||||||| |||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  43154080 ttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 43154000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 251 - 335
Target Start/End: Original strand, 47417681 - 47417765
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  47417681 gttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 47417765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 9645710 - 9645545
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||| |||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||   |||||| |||||  |||||||||||| ||||||||    
T  9645710 tctttttgtctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgcgatttcatcatctaagtgtggtggtgtgttgttcg 9645612  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
     | ||||||||||||||||||||||| ||||  |  |||| ||||||||| ||||||||||| ||||    
T  9645611 tcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcatttgattcatattgagagat 9645545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 52098065 - 52097838
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgc---gttgttcgacatcttgtgcgg 271  Q
    |||||||||||||||||||||||| ||||||  |   |||| ||||| |||||| ||||||||||||||||||||    |||||| |   |||||||| |    
T  52098065 ttcaatctaaataagtgatttttcgcatagaactaaattttctcttcgtgattttgtcatccgagtgtggtggtggtgtgttgtttgttgtcttgtgcag 52097966  T
Q  272 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgttgcagattcaga 368  Q
     ||||||||||||||| |||| |||  |||||||||| ||||||||||||||||| ||| |||| | ||||| || |  || |||||||||||||   ||    
T  52097965 agttgtttgatttcccctattcttgtagtgttcatttgattcatattgaaagatcaattattcaatcaaagatttgggccgtcaacgttgcagatctgga 52097866  T
Q  369 gtcatgtgtattccggtcactttaattt 396  Q
      ||||  ||||||||||||||||||||    
T  52097865 tgcatggatattccggtcactttaattt 52097838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 162 - 348
Target Start/End: Original strand, 20569182 - 20569371
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttgg----ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||| |  |||||||||||||| ||| ||||||||||||| | ||    ||||||||| || ||||| |||||  ||||||||| |  |||||||    
T  20569182 tttttctctttatttcaatctaaataaatga-ttttcacatagatctaggttttttttttctttataatttcatcatctaagtgtggtgatttgttgttc 20569280  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg 348  Q
    | | |||| ||||| |||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||||    
T  20569281 gtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttg 20569371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 6972790 - 6972913
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||||||||||||| ||||| || || |||| |||||||||| ||    
T  6972790 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttat 6972889  T
Q  312 tcatattgaaagatcgattgttca 335  Q
    || |||||||||||||||| ||||    
T  6972890 tcctattgaaagatcgattattca 6972913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 2115749 - 2115574
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| ||||||||  |||  | ||||| |||||  ||||||||| |  ||||||     
T  2115749 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttt 2115651  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||  ||||||||||||| | | ||  |||| | ||||||||||||||||||||||||||||||||||    
T  2115650 gtcgtcttgtgcgt-gttgtttgatttctcatcttcgtgcgatattcatttaattcatattgaaagatcgattgttca 2115574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 335
Target Start/End: Original strand, 49410232 - 49410326
Alignment:
Q  241 gtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||  |||||||| | |||||||| ||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 49410326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 37188753 - 37188581
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||||||| |||||| || | | |||||||||  ||||||| ||||   |||||||||||  ||||||||     
T  37188753 tctttttctctatatttcaatctaaataagtgatttt-cacatatatctag-ttttttctttgtgatttcatcatttaagtgtggtggtttgttgttcgt 37188656  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||| ||||||||||||||  || ||||||||||||| | |||||| ||| |||||||||| ||||    
T  37188655 cgttttgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttg-aagatcgattattca 37188581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 322
Target Start/End: Complemental strand, 32952907 - 32952749
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||  |||||||||| |||||||||||||| | | |||||||||  |||||||||||||  |||||| ||||| |||||| |     
T  32952907 tctttttctctctatttcaaattaaataagtg-tttttcacatagatctag-ttttttctttgtgatttcgtcatctaagtgtgttggtgtgttgtttgt 32952810  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    | |||| ||||| |||||||||||| |  | ||||| ||||||||||||||||||||||||||    
T  32952809 cgtcttatgcgg-gttgtttgattttca-tcttgttacggtgttcatttaattcatattgaaa 32952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 335
Target Start/End: Original strand, 1531841 - 1532011
Alignment:
Q  166 tctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatc 263  Q
    |||||||  |||||||||||||||||| ||||||||||||| | |   |||||||||  ||||||| |||||  |||||||||||  |||||  | | ||    
T  1531841 tctctctatttcaatctaaataagtga-ttttcacatagatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgtctgtcgtc 1531939  T
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||| ||||||||||||||||| || ||  ||||||||| |||| |||||| |||||||||| ||| ||||    
T  1531940 ttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttgaaagatcaattattca 1532011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 14183731 - 14183969
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||  ||| |  ||||||| |||  |||||||  ||||  |||||||||||  ||||||||    
T  14183731 tctttttctctctatttcaatctaaataagtgatttt-cacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgttcg 14183829  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgt 356  Q
       |||||||||  |||||||||||| | || ||  |||||||||||||| ||||||||||||||||||| | |||| | ||||| ||| ||| ||||||    
T  14183830 tagtcttgtgcgt-gttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaaagatcgactattcaatcaaagattttggcgtcaacgt 14183928  T
Q  357 tgcagattcagag-tcatgtgtattccggtcactttaattt 396  Q
    ||||||  | |||  ||||  ||||||||||||||||||||    
T  14183929 tgcagaaccggagaccatggatattccggtcactttaattt 14183969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 323
Target Start/End: Original strand, 43853449 - 43853521
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 323  Q
    |||||||  |||||||||||||||||||||||||| ||||||||||||||| ||||||  |||||||||||||    
T  43853449 gttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaag 43853521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 166 - 335
Target Start/End: Original strand, 44947343 - 44947515
Alignment:
Q  166 tctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||  ||||||||||||||||||||| | ||||||| | ||||||||    |||  ||||||| | |||  |||||||||||  |||| | |       
T  44947343 tctctctctctcaatctaaataagtgatttt-cgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgttggttgttg 44947441  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||||||||||||||| ||  || ||||||||||| ||| ||||||||||||||||| ||||    
T  44947442 tcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaaagatcgattattca 44947515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 18048863 - 18048964
Alignment:
Q  224 gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 323  Q
    ||||||||||||||| || |||| || |||||| | | ||||||| |||||||||||||||  ||  |||||||||||||| ||| ||||||||||||||    
T  18048863 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaag 18048962  T
Q  324 at 325  Q
    ||    
T  18048963 at 18048964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 314
Target Start/End: Complemental strand, 1931856 - 1931723
Alignment:
Q  180 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 279  Q
    ||||||||||| ||||| |||| |||| | ||||||||| |  ||||||| |||||  ||||| |||||| |||||||  | |||||| || | ||||||    
T  1931856 tctaaataagttatttt-cacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgttt 1931758  T
Q  280 gatttcccgtattgttgcggtgttcatttaattca 314  Q
     ||||||||| |||||||||||||||||| |||||    
T  1931757 catttcccgtcttgttgcggtgttcatttgattca 1931723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 6155355 - 6155253
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || ||||| |||| || ||||| || ||||||||||| ||||||||||||||  || |||| || |||||| ||| |||||||||||||    
T  6155355 tgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatattgaaa 6155257  T
Q  323 gatc 326  Q
    ||||    
T  6155256 gatc 6155253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 36204526 - 36204415
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcgg-cgttgtttgatttcccgtattgttgcggtgttcatttaa 310  Q
    |||||||||| |||||||||| ||  |||| || | || |||||||| | || ||| ||| |||||||||||||| | ||||||||||||||||||||      
T  36204526 ttttttcttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttgg 36204427  T
Q  311 ttcatattgaaa 322  Q
    ||||||||||||    
T  36204426 ttcatattgaaa 36204415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 238 - 396
Target Start/End: Complemental strand, 45228124 - 45227963
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagt 337  Q
    |||||||||||  |||||||| | ||||||||||  |||||| ||||||||| ||  | || | ||||||| ||| | ||||||||||||||| |||| |    
T  45228124 agtgtggtggtttgttgttcgccgtcttgtgcggtattgtttaatttcccgtcttcgtacgatattcatttgatttacattgaaagatcgattattcaat 45228025  T
Q  338 taaagaatt-tgcg-caacgttgcagattcagag-tcatgtgtattccggtcactttaattt 396  Q
     ||||| ||  ||| ||||||||||||||| |||  ||||  ||||||||||||||||||||    
T  45228024 caaagatttgggcgtcaacgttgcagattcggagaccatgaatattccggtcactttaattt 45227963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 28857420 - 28857484
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||||||||||||| | ||| | |||||||||||| |||  ||||||||||||||||    
T  28857420 tcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatc 28857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 22300856 - 22300931
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| | |||||||||||||||||||||||| |||  ||||||||||||  ||||  |||| ||||||||||    
T  22300856 gttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatc 22300931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 52944318 - 52944393
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| | | |||||||||||||||| ||||  ||| |||||||||||||| |||  ||||||||||||||||    
T  52944318 gttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatc 52944393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 322
Target Start/End: Complemental strand, 2069680 - 2069611
Alignment:
Q  253 tgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||| |||| |||||| |||||||||||||| | | |||||||||| |||||||  ||||||||||||    
T  2069680 tgttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaa 2069611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 213 - 326
Target Start/End: Complemental strand, 51888351 - 51888238
Alignment:
Q  213 tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaatt 312  Q
    ||||| ||| |||||||||  || ||||| || | || |||||||  | |||| |||| |||||||||||||| | | |||||||||||||| |||  ||    
T  51888351 ttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggtt 51888252  T
Q  313 catattgaaagatc 326  Q
    ||||||||||||||    
T  51888251 catattgaaagatc 51888238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 52934046 - 52933970
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtg-ttcatttaattcatattgaaagatc 326  Q
    |||||||| ||| |||||| ||||||||||||||| | | ||||||||||| ||  ||| |||||||||||||||||    
T  52934046 gttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaagatc 52933970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 1008223 - 1008289
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatt 227  Q
    |||||||||||||  || ||||||||||||||| |||||||||| |||| | |||||||||| |||||    
T  1008223 tctttttctctctattttaatctaaataagtga-ttttcacataaatttagtttttttcttcgtgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 9713919 - 9713994
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| | || |||||| |||||||||||||| | ||||||||||| |||| |||  ||||||||| ||||||    
T  9713919 gttgttcgccgtcatgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatc 9713994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 326
Target Start/End: Complemental strand, 22038904 - 22038829
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| | | ||||| |||||||||||||||| ||| |||||| |||| || |||  ||||||||||||||||    
T  22038904 gttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatc 22038829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 36161729 - 36161792
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
    ||||||||| |||||||||||||  ||| |||||||||||||| |||  ||||||| |||||||    
T  36161729 tcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagat 36161792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 21365153 - 21365091
Alignment:
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    ||||||||||||||||||| ||  |  |||||| ||| ||||||| |||||||||||||||||    
T  21365153 ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaagatc 21365091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 9643369 - 9643470
Alignment:
Q  225 atttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 324  Q
    |||||||| |||||||| |  | || |||||||| | ||||| ||| |||||||||||||| | | ||||||| |||||| |||  |||||||| |||||    
T  9643369 atttcgtcgtccgagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaaga 9643468  T
Q  325 tc 326  Q
    ||    
T  9643469 tc 9643470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 23100617 - 23100673
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtga-tttttcacatagattttggtttttt 217  Q
    |||||||||||  |||||||||||||||||| ||||| ||||||||||  |||||||    
T  23100617 tttttctctctaattcaatctaaataagtgatttttttacatagatttatgtttttt 23100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 4e-51; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 33342375 - 33342596
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| || |||||||||||| |||||||  | |||| ||||||||    
T  33342375 ttcaatctaaataagtgatttttcacatagatctaggttttttcttcgtgatttcgtcacccaagtgtggtggtgtgttgttcttcgtcttatgcggcgt 33342474  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cgcaacgttgcagattcagagtcat 373  Q
    | ||||||||||||||||||||||||||| |||| |||||||||| |||||| ||| |||| | |||||||| | ||  |||||||||||   ||| |||    
T  33342475 tttttgatttcccgtattgttgcggtgtttatttgattcatattg-aagatcaattattcaatcaaagaattggacgtcacgttgcagatctggaggcat 33342573  T
Q  374 gtgtattccggtcactttaattt 396  Q
    | |||||| ||||||||||||||    
T  33342574 gagtattcaggtcactttaattt 33342596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 346
Target Start/End: Original strand, 16794216 - 16794401
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||||||||||||||||||||||||||||| || | ||||||| |||| ||||||| ||||||||| |||||| |  ||||||||     
T  16794216 tctttttctctctaattcaatctaaataagtgatttttcacataaatctaggttttt-cttcgtgatttcatcatccgagagtggtgttatgttgttcgt 16794314  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt 346  Q
    | ||||||||  ||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| ||| |||| | ||||||||    
T  16794315 cgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaaagatcaattattcaatcaaagaatt 16794401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 28239756 - 28239931
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| | |||||| ||| |  |||||||||||  |||||||| |||  ||||||||     
T  28239756 tctttttctctctatttcaatctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcatttgagtgtggcggtttgttgttcgt 28239855  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||||||||||||||| | |||||||||||||||||||||| ||| ||||||||||||| ||| ||||    
T  28239856 cgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaaagatcaattattca 28239931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 35580381 - 35580555
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| | |||||||||||| ||||||| |||||  |||||||||||  ||||||||     
T  35580381 tctttttctctctatttcaatttaaataagtgatttt-cacatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgt 35580479  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||| ||||||||||||| |||| || ||||||||||| ||| |||||||||||| |||||||| ||||    
T  35580480 cgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatcgattattca 35580555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 163 - 330
Target Start/End: Complemental strand, 43192503 - 43192337
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  ||||||||||||||||| ||||| |||||||| | |||||||||||| ||||||| |||||  |||||||||||  |||||||| | |    
T  43192503 ttttctctctatttcaatctaaataagtggttttt-acatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 43192405  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
    |||||||||||||||||||||| |||| || ||| ||||||||||| |||||| ||||||||||||||    
T  43192404 cttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatcgatt 43192337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 11196828 - 11196986
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||    
T  11196828 ttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 11196926  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||| |||| || ||||||||||||||| |||||||||| |||||||||| ||||    
T  11196927 tgtttgattttccgtcttcttgcggtgttcatttgattcatattg-aagatcgattattca 11196986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 175 - 327
Target Start/End: Complemental strand, 15597312 - 15597161
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||||| ||| |    
T  15597312 ttcaatctaaataagtgatttt-cacatagatctaggttttttcttcatgatttcgtcatccgagtgtagtggtgtgttgtttgtcgtcttgtgaggcct 15597214  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 327  Q
    || ||||||| |||| ||||| |||||||||||| ||||||||| || |||||    
T  15597213 tggttgattttccgttttgttacggtgttcatttgattcatattaaacgatcg 15597161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 39153291 - 39153065
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggt----tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcg 270  Q
    |||||| ||||||||||||||| ||||||||||| |||    ||||||||| ||||||||||||||||||||||||||| |||||||| | |||||||      
T  39153291 ttcaatttaaataagtgatttt-cacatagatttaggtattttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtc 39153193  T
Q  271 gcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcag 367  Q
    |||||||| |||||| ||| ||||| || | ||||||| ||||| |||||||||| |||| |||| ||||| |||||| |   || |||||||||| | |    
T  39153192 gcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaaagattgattattcaattaaa-aatttgggtgtcagcgttgcagatccgg 39153094  T
Q  368 agtcatgtgtattccggtcactttaattt 396  Q
    || |||| |||||||| ||||||||||||    
T  39153093 aggcatgggtattccgatcactttaattt 39153065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 44100093 - 44099920
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| |  ||||||||||  ||||||  |||||  |||||||||||  ||||||||     
T  44100093 tctttttctctatatttcaatctaaataagttatttt-cacatagatctaagttttttctttgtgattta-tcatctaagtgtggtggtttgttgttcgt 44099996  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||| ||| ||||    
T  44099995 cgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatcaattattca 44099920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 343
Target Start/End: Original strand, 11725604 - 11725786
Alignment:
Q  159 gtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||| |  ||||||||||||||||| |||||||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||     
T  11725604 gtctttttctctttatttcaatctaaataagtg-tttttcacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttca 11725702  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaaga 343  Q
     | ||||||||| | |||||||||||||| | || ||||||||||||| | |||||||||| |||||||||| |||| |||||||    
T  11725703 tcgtcttgtgcgacattgtttgatttcccattttcttgcggtgttcatctgattcatattg-aagatcgattattcaattaaaga 11725786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 19876150 - 19876372
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| |||||||||   |||||||||||  ||||||| |||||  ||||| |||||  |||||||| | |||||||||||||    
T  19876150 ttcaatctaaataagtgatttt-cacatagatcaaggttttttctttgtgatttcatcatctaagtgtagtggtttgttgttcgtcgtcttgtgcggcgt 19876248  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcgc---aacgttgcagattcagag-t 370  Q
    ||||||||| ||||| || ||| ||||||||||| |||||||||| |||||||||| |||| | |||| ||||| ||   |||||||||||| | |||      
T  19876249 tgtttgattccccgtcttcttgtggtgttcatttgattcatattg-aagatcgattattcaatcaaag-atttgggcctgaacgttgcagatccggagac 19876346  T
Q  371 catgtgtattccggtcactttaattt 396  Q
    ||||  ||||||||||||||||||||    
T  19876347 catggatattccggtcactttaattt 19876372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 2655792 - 2655968
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | |   |||||||||  | ||||| |||||  ||||||||| |  |||||||    
T  2655792 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctagattttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 2655890  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||| ||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  2655891 gtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 2655968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 333
Target Start/End: Complemental strand, 9619519 - 9619345
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 256  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||||| | |||||| |||||    ||||| |||||   |||||||| |  ||||||    
T  9619519 tctttttctctttatttcaatctaaataagtgatttt-cacatagatttagatttttt-ttcattgtaatttcatcatctacgtgtggtgatttgttgtt 9619422  T
Q  257 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgtt 333  Q
    || | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||    
T  9619421 cgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgtt 9619345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 27747258 - 27747036
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||| ||||||||| ||||| |||||| || |  ||||||||||| |||||||  |||| | ||||||||||| |||||||| ||||||||||| |      
T  27747258 ttcaatttaaataagtaatttt-cacataaatataagttttttcttcgtgatttcaccatctgggtgtggtggtgtgttgttcgtcatcttgtgcgacag 27747160  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcagagtc 371  Q
    |||||||||||| || |||||||||||||||||| ||||||||||||||||| ||| |||| | |||| ||||| |   |||||||| |||| | ||  |    
T  27747159 tgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatcaattattcaatcaaag-atttgggcatcaacgttgtagatccggatgc 27747061  T
Q  372 atgtgtattccggtcactttaattt 396  Q
    ||| |||||||||||||||| ||||    
T  27747060 atgggtattccggtcacttttattt 27747036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 33896004 - 33896180
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  || ||||||||||||||| ||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  |||||||    
T  33896004 tctttttctctctatttaaatctaaataagtgacttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 33896102  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||| ||||    
T  33896103 gtcttcttgtgcggcgttgtttgttttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattca 33896180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 194 - 396
Target Start/End: Original strand, 15046850 - 15047054
Alignment:
Q  194 ttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtatt 292  Q
    ||||||||||||| | |||||||| |||| ||||||||||||||||||||||||||| |||||||| | |||||||||| | |||||||||||| || ||    
T  15046850 ttttcacatagatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtctt 15046949  T
Q  293 gttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagagtcatgtgtattccggtcactt 390  Q
    | |||| |||| |||| ||| ||||||||| ||||||| | || | ||||  || | || ||||||||||||| ||||| ||||||||||||| | ||||    
T  15046950 ggtgcgatgtttatttgattgatattgaaaaatcgatt-tccaataaaagttttggacgtcaacgttgcagatccagaggcatgtgtattccgattactt 15047048  T
Q  391 taattt 396  Q
    ||||||    
T  15047049 taattt 15047054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 396
Target Start/End: Original strand, 33298794 - 33299016
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | ||||||  |||  |||||||||||||| ||| | |||||| |||||||  | ||||||| || ||    
T  33298794 ttcaatctaaataagtgatttt-cacatagatctaggttttacctttgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtggtgt 33298892  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcagagtca 372  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||| ||||||  |||| |||| ||||||| || | || ||||||||||||| | ||  ||    
T  33298893 tgtttgatttctcgtcttgctgcggtgttcatttgattcatatcgaaagagtgattattcaattaaagatttggtcgtcaacgttgcagatacggatgca 33298992  T
Q  373 tgtgtattccggtcactttaattt 396  Q
    || ||||||  |||||||||||||    
T  33298993 tgagtattctagtcactttaattt 33299016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 4808902 - 4809062
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 273  Q
    |||||| ||||||||||||||| ||||||||| | | |||||| |||  | ||||| |||||  ||||||||| |  |||||||| | ||||||||||||    
T  4808902 ttcaatgtaaataagtgatttt-cacatagatctagctttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcg 4809000  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  4809001 ttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 4809062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 9498748 - 9498585
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcg 270  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    |||  | ||||| |||||  ||||||||| |  ||||||||   |||||||||    
T  9498748 ttcaatctaaataagtgatttt-cacatagatttaggttttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgttgtcttgtgcg 9498650  T
Q  271 gcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    || |||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||||||||||    
T  9498649 gctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattaaaagatcgattgttca 9498585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 163 - 394
Target Start/End: Complemental strand, 32724647 - 32724405
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagat---------tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgtt 253  Q
    ||||||||||  |||||||||||||||||||||| |||||||||         ||| |||||||||| |||||||| |||||  | |||||||||  |||    
T  32724647 ttttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttgttttttctttatgatttcatcatctaactgtggtggtttgtt 32724549  T
Q  254 gttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-c 351  Q
    ||||| | ||||||||||||||||||||||||| || ||  ||| |||||||||| ||||||||||||| ||||||| |||| | ||||| ||  ||| |    
T  32724548 gttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttcatttgattcatattgaaatatcgattattcaatcaaagatttgggcgtc 32724449  T
Q  352 aacgttgcagattcaga-gtcatgtgtattccggtcactttaat 394  Q
    |||||||||||| | || | ||||  ||||||||||||||||||    
T  32724448 aacgttgcagatccggaggccatggatattccggtcactttaat 32724405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 9072640 - 9072816
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||| |||||||||||  ||||||||| || | |   |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  9072640 tctttttctctctatttcaatttaaataagtga-ctttcacataaatctagattttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 9072738  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
      ||||||||||||||||||||| |||||| | || ||||||||||||||| |||| |||||||||||||||| ||||    
T  9072739 ttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatcgattattca 9072816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 162 - 325
Target Start/End: Original strand, 34611729 - 34611892
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    ||||||| |||  |||| ||||||||||||||||| |||||| || | |||||||| |||  ||||||| |||||  |||||||||||  |||||||| |    
T  34611729 tttttctttctatttcagtctaaataagtgatttt-cacataaatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtc 34611827  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
     ||||||||||||||||||||||| ||||  |  |||||||||||||| ||||||||||||||||    
T  34611828 gtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaaagat 34611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 212 - 396
Target Start/End: Original strand, 11464146 - 11464333
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  | ||||| |||||  ||||||||| |  |||||||| | ||||||||||||||||||||||||  || ||  |||||||||||||| ||    
T  11464146 ttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgat 11464245  T
Q  312 tcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    |||||||||||||||||||||||| | ||||| ||  ||| ||||||||||||| | ||| | |||  ||||||||||||||||||||    
T  11464246 tcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcaatggatattccggtcactttaattt 11464333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 14907085 - 14906909
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtt--ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||  |||||||  | ||||| |||||  | ||||||| |  ||||||     
T  14907085 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttctttttctttgtaatttcatcatcaaaatgtggtgatttgttgttt 14906987  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||||||||||||||||||||| ||  |||| ||||||||| |||| |||| ||||||||||||||||    
T  14906986 gtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtattaaaagatcgattgttca 14906909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 42448189 - 42448013
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttt--ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||||||||||||||||||  || |||||| | ||||||  |||||  ||||||| |||||  ||||||| |||  |||||||    
T  42448189 tctttttctctctatttcaatctaaataagtgattta-catatagatctaggttttgtttctttgtgatttcatcatctaagtgtggaggtttgttgttc 42448091  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||||||| |||||||||||  ||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  42448090 gtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattca 42448013  T

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Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 29777194 - 29777317
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||| | ||||||| |||||||| || ||||||||||||||| ||    
T  29777194 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttat 29777293  T
Q  312 tcatattgaaagatcgattgttca 335  Q
    || |||||||||||||||| ||||    
T  29777294 tcctattgaaagatcgattattca 29777317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 43890286 - 43890046
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  ||||||||||||||||||||||  |||||||| | | ||||||  |||  | ||||| |||||  ||| ||||| |  |||||||    
T  43890286 tctttttctctttaattcaatctaaataagtgattttg-acatagatctagattttttttctttgtaatttcatcatctaagtatggtgatttgttgttc 43890188  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 355  Q
    | | ||||||||| |||| ||||||||||||| ||  | |||||||||||| |||||| ||||||||||||||||||| | ||||| ||  ||| |||||    
T  43890187 gtcgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttcatttgattcattttgaaagatcgattgttcaatcaaagatttgggcgtcaacg 43890088  T
Q  356 ttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    |||||||| | ||| | |||  ||||||||||||||||||||    
T  43890087 ttgcagatccggaggcaatggatattccggtcactttaattt 43890046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 23851553 - 23851480
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||| |||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  23851553 tcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 23851480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 330
Target Start/End: Original strand, 44577959 - 44578129
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||| ||||||||||  ||||||||| | |||||||| |||  | ||||| |||||  |||||||||||  ||||||||    
T  44577959 tctttttctctctatttcaatctaactaagtgattta-cacatagatctaggtttttttctttgtaatttcatcatctaagtgtggtggtttgttgttcg 44578057  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
     | |||||||||||||||||| || |||| | ||  |||||| || |||| ||| |||||||||||||||||    
T  44578058 tcgtcttgtgcggcgttgtttcatctcccatcttcatgcggtatttatttgatttatattgaaagatcgatt 44578129  T

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Target: chr8; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 162 - 325
Target Start/End: Complemental strand, 37566038 - 37565875
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    ||||| |||||  |||||||||||||| ||||||| ||||||||||| |||||||| |||   |||||| |||||  |||||||||||  ||| |||| |    
T  37566038 tttttatctctatttcaatctaaataattgatttt-cacatagatttaggtttttttctttgagatttcatcatctaagtgtggtggtttgttattcgtc 37565940  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
     ||||||||||| ||||||||||| || |  |  ||||| |||||||| ||||||||||||||||    
T  37565939 gtcttgtgcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattgaaagat 37565875  T

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Target: chr8; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 219 - 326
Target Start/End: Original strand, 5333386 - 5333493
Alignment:
Q  219 ttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatatt 318  Q
    |||| |||||||||||| ||||| |||| || |||||||| | |||||||||| ||||||||||||  ||| ||||| |||||||| |||  ||| ||||    
T  5333386 ttcaagatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctatt 5333485  T
Q  319 gaaagatc 326  Q
    ||||||||    
T  5333486 gaaagatc 5333493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 17949262 - 17949333
Alignment:
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||||||||| |||| ||  || ||||||||||| ||||||||||||||||||||| ||||    
T  17949262 ttgtgcggcgttgtttgatttgccgtcttcgtgtggtgttcattttattcatattgaaagatcgattattca 17949333  T

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Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 15889581 - 15889644
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
    ||||||||||||||||||||||| || | | |||||| ||||||||| ||||||||||||||||    
T  15889581 tcttgtgcggcgttgtttgattttccttctggttgcgatgttcatttgattcatattgaaagat 15889644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 8443650 - 8443536
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||| || ||||||||||| ||  |||| |||| || |||||||| | |||||||||||||||||||||| | ||| ||||||| |||||| |||  |    
T  8443650 ttttttttttatgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggt 8443551  T
Q  312 tcatattgaaagatc 326  Q
    |||  ||||||||||    
T  8443550 tcaatttgaaagatc 8443536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 29617374 - 29617301
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 324  Q
    |||||||| | |||||||||||| ||||||||||| ||| |||||||||||||| |||  ||| ||||||||||    
T  29617374 gttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaaga 29617301  T

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Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 24099400 - 24099284
Alignment:
Q  206 ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttca 305  Q
    ||||| ||| |||||| |||||||||| || ||||| |  | || |||||||| | || ||| | ||||||||||||||| | | |||||||||||||||    
T  24099400 ttttgttttattcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttca 24099301  T
Q  306 tttaattcatattgaaa 322  Q
    |||  ||||||||||||    
T  24099300 tttggttcatattgaaa 24099284  T

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Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 326
Target Start/End: Original strand, 36532823 - 36532986
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||| |||||  |||||| |||||||| || |||||||||| |||| ||||||||||||  | |||  || ||   |||||||| || |||||||| |     
T  36532823 tttttatctctatttcaatttaaataag-gagttttcacatatatttaggttttttcttcgaggttttatcgtctaggtgtggtgttgtgttgttcgtcg 36532921  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||| ||||||||||||| | | |||||  |||||| ||||  ||| ||||||||||||    
T  36532922 tcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaaagatc 36532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 8981167 - 8981227
Alignment:
Q  266 gtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||| ||||||||| ||| |||||||||||||| |||  || |||||||||||||    
T  8981167 gtgcggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatc 8981227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 14544978 - 14544926
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| |||| |||||||||||||| ||| ||||||||||||||    
T  14544978 gtttgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcga 14544926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 324
Target Start/End: Original strand, 21237788 - 21237852
Alignment:
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 324  Q
    ||||||||| |||||||||||| ||| ||| ||||||| |||||| |||  ||||||||||||||    
T  21237788 catcttgtggggcgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaaga 21237852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 3673405 - 3673507
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| ||  |||| |||| || |||||||| | |||| |||||   |||||||||||  || |||||||||||||| |||| ||| ||||||||    
T  3673405 tgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgg---tgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaa 3673501  T
Q  323 gatcga 328  Q
    ||||||    
T  3673502 gatcga 3673507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 7883366 - 7883266
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||||||  |||| || | || |||||||| | ||||||||||||||   ||||||| ||| |||| ||||||||  || | ||||||||||||    
T  7883366 tgatttcgtcatctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaa 7883270  T
Q  323 gatc 326  Q
    ||||    
T  7883269 gatc 7883266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 324
Target Start/End: Complemental strand, 14916315 - 14916214
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || | ||| || | |||||||| || | | |||||||||  |||||||||||  || |||||||||||||| |||  ||||||||||||    
T  14916315 tgatttcgtcgtctgggtgcggcgttgcgttgtccgtccttttgtgcggcactgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaa 14916216  T
Q  323 ga 324  Q
    ||    
T  14916215 ga 14916214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 27498438 - 27498389
Alignment:
Q  277 tttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    ||||||||| ||| |||| | |||||||||||||||| ||||||||||||    
T  27498438 tttgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatc 27498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 1236785 - 1236722
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||||||||||||||  | | ||||||||||||||  ||  ||||||||||||||||    
T  1236785 tcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaaagatc 1236722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 1239485 - 1239422
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||||||||||||||  | | ||||||||||||||  ||  ||||||||||||||||    
T  1239485 tcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaaagatc 1239422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 3240369 - 3240445
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 327  Q
    |||||||| | |||||| || |||||||||||||| ||| |||||| ||||||  |||  || ||||||||||||||    
T  3240369 gttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcg 3240445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 1e-47; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 160 - 321
Target Start/End: Original strand, 34489164 - 34489327
Alignment:
Q  160 tctttttctctctcgttcaatcta--aataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||| ||  ||||||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  34489164 tctttttctctctaattcaatatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttc 34489263  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 321  Q
    | | ||||||||| |||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  34489264 gtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa 34489327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 163 - 329
Target Start/End: Complemental strand, 23947475 - 23947310
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| | |    
T  23947475 ttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtcgt 23947377  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 329  Q
    ||||||||||||||||||||||||| | || ||||||||||||||| ||||||||||||||||||||    
T  23947376 cttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatcgat 23947310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 160 - 328
Target Start/End: Complemental strand, 33543780 - 33543615
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||| |||||||||||||||||  |||||| |||| ||||||||||||| || | |||||||| ||||||||     
T  33543780 tctttttctctatatttcaatctaaataagtaatttttcacatagatttaagttttt-cttcgtgatttcgtcatctgattatggtggtgtgttgttcgt 33543682  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    | ||||||||||||||||||||||| | || |||||||||||||||||  |||||||||||||||||||    
T  33543681 cgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatt--attcatattgaaagatcga 33543615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 16419074 - 16419249
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagat-tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| |||| |||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  16419074 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctttgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 16419172  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||||||||||| ||||||| ||||    
T  16419173 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaaaaatcgattattca 16419249  T

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Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 175 - 330
Target Start/End: Original strand, 25337501 - 25337656
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 273  Q
    |||||||||||||| ||||||| |||||| || | |||||||| |||| ||||||||||||||||||||||||||| |||||||| | ||||| |||| |    
T  25337501 ttcaatctaaataaatgatttt-cacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtg 25337599  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
    |||||||||||  ||| |||||||||||||||||| |||||||||||||||||||||    
T  25337600 ttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatcgatt 25337656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 25064151 - 25064327
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  25064151 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 25064249  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  25064250 gtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 25064327  T

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Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 12165772 - 12165930
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||  || |||  |||||  |||||||||||  |||||||| | |||||||||||||    
T  12165772 ttcaatctaaataagtgatttt-cacatagatttaggttttttctttgtggttttatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgt 12165870  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||| |||||| ||| || |||||||||||||||||||||||||||||||| |||| ||||    
T  12165871 tgttcgatttcacgt-ttcttgcggtgttcatttaattcatattgaaagattgattattca 12165930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 327
Target Start/End: Complemental strand, 8028279 - 8028112
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| |  ||||||| ||| |||||||| |||||  |||||||||||  ||||||||    
T  8028279 tctttttctctctgtttcaatctaaataagtgatttt-cacatagatctaagtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcg 8028181  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 327  Q
     | ||||||||||||||||||||||||||||  |  | |||||||||||| ||||||||| ||||||||    
T  8028180 tcgtcttgtgcggcgttgtttgatttcccgtcatcgtacggtgttcatttgattcatattaaaagatcg 8028112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 8196568 - 8196393
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| ||||   |||||||||||  ||||||||    
T  8196568 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatataagtgtggtggtttgttgttcg 8196470  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||||||||||||| ||  |||||||||||||| |||| ||  |||||||||||| ||||    
T  8196469 tcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcttacagaaagatcgattattca 8196393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 35001506 - 35001681
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  || ||||||||||||||| |||| |||||||| | || |||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  35001506 tctttttctctctattttaatctaaataagtgactttt-acatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 35001604  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| |||| |||||||||||| ||| ||||    
T  35001605 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaaagatcaattattca 35001681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 175 - 330
Target Start/End: Complemental strand, 4352146 - 4351987
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttt-----ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgc 269  Q
    ||||||| |||||||||| |||||| |||||||| | ||||     |||||| |||||||||||||||||||||||| || |||||||| | |||| ||     
T  4352146 ttcaatccaaataagtga-ttttcatatagatttagtttttttgtcttcttcgtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgt 4352048  T
Q  270 ggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
    |||||| |||||||||||||  || |||||| |||||||||||||||||||||||||||||    
T  4352047 ggcgttatttgatttcccgtcatggtgcggtattcatttaattcatattgaaagatcgatt 4351987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 4468475 - 4468713
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||| ||||||||  |||||||||||||||||||||| || |||||| | |||||||||||  ||||||| ||||   |||||||||||  ||| ||||     
T  4468475 tcttgttctctctatttcaatctaaataagtgatttt-catatagatctaggttttttctttgtgatttcatcatataagtgtggtggtttgttattcgt 4468573  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gcaacgtt 357  Q
    | |||||||| |||||||||||||| |||| ||  ||| |||||||||| ||| |||||||| |||||||| |||| | ||||| || ||   |||||||    
T  4468574 cgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaaggatcgattattcaatcaaagatttggccgtcaacgtt 4468673  T
Q  358 gcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||| |||| ||||||  |||||||| |||||||||||    
T  4468674 gcagatccagaggtcatggatattccggccactttaattt 4468713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 33740739 - 33740564
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||| |||  ||||||| |||||  ||||||| |||  ||||||||    
T  33740739 tctttttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttctttgtgatttcatcatctaagtgtggcggtttgttgttcg 33740641  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | | |||||||||||||||| |||| ||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  33740640 tcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 33740564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 325
Target Start/End: Complemental strand, 28635268 - 28635117
Alignment:
Q  175 ttcaatctaaataagtgatt-tttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcg 273  Q
    |||||| ||||||||||||| ||| |||||||| |  ||||||||| | ||||||||||||  |||||||| |||  |||||||| | |||||| ||| |    
T  28635268 ttcaatttaaataagtgattcttttacatagatctaagttttttctacgtgatttcgtcatttgagtgtggcggtttgttgttcgtcgtcttgtacggtg 28635169  T
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||    
T  28635168 ttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagat 28635117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 17237445 - 17237208
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| | |||||||||||  |||||||  ||||  |||||||||||  ||||||||     
T  17237445 tctttttctctatatttcaatctaaataagttatttt-cacatagatctaggttttttctttgtgatttcagcatctaagtgtggtggtttgttgttcgt 17237347  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 356  Q
    | |||||||||||| |||| |||||||||| || ||||||||||||| | |||||| ||| |||||||||| |||| | |||| ||||| |   ||||||    
T  17237346 cgtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaag-atttgggtgtcaacgt 17237249  T
Q  357 tgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||| | || | ||||  ||||||||||||||||||||    
T  17237248 tgcagatccggaggccatggatattccggtcactttaattt 17237208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 12652856 - 12653099
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-----cttcatgatttcgtcatccgagtgtggtggtgcgttg 254  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | | ||||||     |||  ||||||| |||||  |||||||||||  ||||    
T  12652856 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttttcctttgtgatttcatcatctaagtgtggtggtttgttg 12652954  T
Q  255 ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgc--gca 352  Q
    |||  | ||||||||||||||||||||||| || | ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| || ||   ||    
T  12652955 ttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttggccgtca 12653054  T
Q  353 acgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||||||   || ||||||  |||||||||| |||||||||    
T  12653055 acgttgcagatctggaggtcatggatattccggtcgctttaattt 12653099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 206 - 396
Target Start/End: Complemental strand, 4984682 - 4984489
Alignment:
Q  206 ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttca 305  Q
    |||| |||||| |||  ||||||| |||||  |||||||||||  |||||||| | |||||||||| ||||||||||||||||| ||  || ||||||||    
T  4984682 tttttgtttttcctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttca 4984583  T
Q  306 tttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||| ||||||||||||||||||||| |||| | |||| ||||| |   ||||||||||||||| || ||||||  ||||||| ||||||||||||    
T  4984582 tttgattcatattgaaagatcgattattcaatcaaag-atttgggcatcaacgttgcagattcggaggtcatggatattccgatcactttaattt 4984489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 396
Target Start/End: Original strand, 4088393 - 4088615
Alignment:
Q  177 caatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgtt 275  Q
    |||||||||||||||||||| ||||||||| | | |||||| |||  ||||||| |||||  |||||||||||  |||||||  | ||||||||||||||    
T  4088393 caatctaaataagtgatttt-cacatagatctagttttttttctttttgatttcatcatctaagtgtggtggtttgttgttcatcgtcttgtgcggcgtt 4088491  T
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtca 372  Q
    |||||||||||||| ||  |||| ||||||||| |||| ||  ||||||||||||||||| | ||||| ||  ||| ||||||||||||| | || | ||    
T  4088492 gtttgatttcccgtcttcgtgcgatgttcatttgattcttacagaaagatcgattgttcaatcaaagatttgggcgtcaacgttgcagatccggaggcca 4088591  T
Q  373 tgtgtattccggtcactttaattt 396  Q
    ||  ||||||||||||||||||||    
T  4088592 tggatattccggtcactttaattt 4088615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 7881264 - 7881024
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||| |   ||  ||||| |||||  ||||||||| |  |||||||    
T  7881264 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttc 7881166  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 355  Q
    | | ||||||||||||||||||||||| || | ||  ||||||||||| || |||||||||||||||||||||||||| | ||||| ||  ||| |||||    
T  7881165 gtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaacg 7881066  T
Q  356 ttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    |||||||| | ||| | |||  ||||||||||||||||||||    
T  7881065 ttgcagatccggaggcaatggatattccggtcactttaattt 7881024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 8496881 - 8497122
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgat---ttcgtcatccgagtgtggtggtgcgttgtt 256  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| ||| |  |   ||| ||||   |||| |||| |  ||||||    
T  8496881 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtagtttcatcatttaagtgcggtgatttgttgtt 8496979  T
Q  257 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cgcaac 354  Q
    || |||||||||||||||||||||||||| ||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| || |   |||||    
T  8496980 cgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaaagatcgattcttcaatcaaagatttgggcggcaac 8497079  T
Q  355 gttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||||| | || |  |||  ||||||||||||||||||||    
T  8497080 gttgcagatcctgatgcaatggatattccggtcactttaattt 8497122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 241 - 396
Target Start/End: Original strand, 33110608 - 33110766
Alignment:
Q  241 gtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaa 340  Q
    ||||||||  |||||||  | |||||||||| ||||||||||||| ||| ||  |||||||||||||| ||||||||| ||||||||||| |||| | ||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattaaaagatcgattattcaatcaa 33110707  T
Q  341 agaattt-gcg-caacgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||| ||| ||| ||||||||||||| | || ||||||  ||||||||||||||||||||    
T  33110708 agattttggcgtcaacgttgcagatccggaggtcatggatattccggtcactttaattt 33110766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 10228595 - 10228770
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||| |||||||  |||||||||||||||||| |||| ||||| || | || |||||||||  ||||||| ||||   |||||| ||||  ||||||||    
T  10228595 tctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcg 10228693  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||| ||||||||||| |||  ||||||||||| |||| ||||    
T  10228694 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattca 10228770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 7876206 - 7876030
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||| |   ||  ||||| |||||  ||||||||| |  |||||||    
T  7876206 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgcaatttcatcatctaagtgtggtgatttgttgttc 7876108  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||||| ||||||||||||| || | ||  ||||||||||| || ||||||||| ||||||||||||||||    
T  7876107 gtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatattaaaagatcgattgttca 7876030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 26588563 - 26588499
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||  ||||||||||||||||    
T  26588563 tcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatc 26588499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 31296808 - 31296879
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||  |||||||||||||||||||||||||  | | ||||||| |||||||||| |||||||||||||    
T  31296808 gttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaa 31296879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 235
Target Start/End: Original strand, 33109750 - 33109824
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatc 235  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | |||||||||||  ||||||| |||||    
T  33109750 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggttttttctttgtgatttcatcatc 33109824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 326
Target Start/End: Complemental strand, 7976316 - 7976204
Alignment:
Q  214 ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattc 313  Q
    |||| ||| |||||||||| || ||||| | || || |||||||| | |||||||||||||| ||| |||   ||| |||||| ||||||| |||| |||    
T  7976316 tttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttc 7976217  T
Q  314 atattgaaagatc 326  Q
    ||||| |||||||    
T  7976216 atattaaaagatc 7976204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 326
Target Start/End: Complemental strand, 34185784 - 34185720
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    ||||||| | |||||||||||||  ||| |||||| ||||||| |||| ||||||||||||||||    
T  34185784 tcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaaagatc 34185720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 30493492 - 30493595
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    ||||||| || || ||||| |||| || |||||||| | |||||||| |||||||||||||||   | |||||  ||||||| |||  ||||||||||||    
T  30493492 tgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaa 30493591  T
Q  323 gatc 326  Q
    ||||    
T  30493592 gatc 30493595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 330
Target Start/End: Complemental strand, 31575637 - 31575530
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    ||||||||||||| || || |||| |  |||||||  | || |||||| |||||||||||||| ||| |||||||| ||||| | | |||| ||||||||    
T  31575637 tgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaaa 31575538  T
Q  323 gatcgatt 330  Q
     |||||||    
T  31575537 aatcgatt 31575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 308
Target Start/End: Complemental strand, 1704260 - 1704163
Alignment:
Q  211 gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcattt 308  Q
    ||||||||||  | |||| ||| || |||||||||| || ||||||||  |||||||||  | || ||| ||||| ||| ||||||||||||||||||    
T  1704260 gttttttcttagtaattttgtcgtctgagtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgttgcggtgttcattt 1704163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 8266551 - 8266588
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgattttt 197  Q
    |||||||||||||  |||||||||||||||||||||||    
T  8266551 tctttttctctctacttcaatctaaataagtgattttt 8266588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 30776656 - 30776689
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgattt 284  Q
    |||||||| |||||||||||||||||||||||||    
T  30776656 gttgttcgtcatcttgtgcggcgttgtttgattt 30776689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 11321546 - 11321494
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| |||||| ||||||| |||| ||| ||||||||||||||    
T  11321546 gtttgatttcacgtcttgttgtggtgttcgtttagttcctattgaaagatcga 11321494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Complemental strand, 24227809 - 24227757
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| || |  |||||||||||||||||||||||||| |||||    
T  24227809 gtttgatttcacgtcttatcacggtgttcatttaattcatattgaaatatcga 24227757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 30894613 - 30894665
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| ||| |||  ||||||||| |||| ||||||||||||||||||    
T  30894613 gtttgatttcgcgtcttgccgcggtgttcgtttagttcatattgaaagatcga 30894665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 9e-46; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 161 - 396
Target Start/End: Original strand, 37169145 - 37169381
Alignment:
Q  161 ctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||| | | |||||||||| ||||||||||| ||||||||| ||||  ||||| || |    
T  37169145 ctttttctctctaattcaatataaataagtgatttttcacatagatctagattttttcttcttgatttcgtcacccgagtgtgatggtctgttgtccgtc 37169244  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttg 358  Q
     |||||||| |||||||||||||| |||||||||||||||| |||||| |||||||| | |||||| ||| |||| |||||||||| | || ||||||||    
T  37169245 gtcttgtgcagcgttgtttgattttccgtattgttgcggtgctcatttgattcatatcg-aagatcaattattcaattaaagaattagacgtcaacgttg 37169343  T
Q  359 cagattcagagtcatgtgtattccggtcactttaattt 396  Q
    ||||| | |||  |||||||||||  ||| ||||||||    
T  37169344 cagatccggagatatgtgtattccaatcattttaattt 37169381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 46178490 - 46178720
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||  |||||||     
T  46178490 tctttttctctctaattcaatctaaataagtgctttttcacatagatctaggttttttcttcgtgatttcgtcttccgagtgtggtggtgtattgttcgt 46178589  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 357  Q
    |||||||||| | |||||||        |||||||||| |||||||||| ||||||||||||| || |||| |||| | ||||||||  ||| |||||||    
T  46178590 catcttgtgcagtgttgttt--------gtattgttgcagtgttcatttgattcatattgaaatattgattattcaatcaaagaattgggcgtcaacgtt 46178681  T
Q  358 gcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    |||||| | ||| |||| |||||||||||||||| ||||    
T  46178682 gcagatccggaggcatgggtattccggtcacttttattt 46178720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 46934556 - 46934730
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||| |||||||  |||||||||||||||||||||| |||||||||   |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  46934556 tctttctctctctatttcaatctaaataagtgatttt-cacatagatccaggttttttcttgttgatttcatcatctaagtgtggtggtttgttgttcgt 46934654  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  46934655 cgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 46934730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 22802935 - 22803110
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||||||||||| ||||| | |||||| |||   || |||||||||  |||||||| |||  ||||||||     
T  22802935 tctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttctctatgtgctttcgtcatttgagtgtggcggtttgttgttcgt 22803034  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||| ||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||| ||| ||||    
T  22803035 cgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaaagatcaattattca 22803110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 25162350 - 25162588
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||  ||||||||| | |||||||| |||  ||||||| |||||  |||||||| ||  ||||||||    
T  25162350 tctttttctctctatttcaatctaaataagtgattt--cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtagtttgttgttcg 25162447  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacg 355  Q
     | |||||||||||||||||||||||||| | ||  ||||||||||||||  |||||||||||||||||||| |||| | |||| |||||  || |||||    
T  25162448 tcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaaagatcgattattcaatcaaag-atttgaccgtcaacg 25162546  T
Q  356 ttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||| | || || |||  ||||||||||||||||||||    
T  25162547 ttgcagatccggaggtaatggatattccggtcactttaattt 25162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 25631688 - 25631512
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  |||||||    
T  25631688 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 25631590  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
      | |||||||||||||||||| ||||||||| ||  |||||||||||||| ||| ||||||||||||||||| ||||    
T  25631589 tccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatcgattattca 25631512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 223 - 396
Target Start/End: Original strand, 31794047 - 31794222
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||| |||||| |||||| |||||| |||||||| | | ||||||||||||||||||||| |  | |||||||||||||||||| |||||||||||||    
T  31794047 tgattttgtcatctgagtgtagtggtgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaa 31794146  T
Q  323 gatcgattgttcagttaaagaatttgcg---caacgttgcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    |||||||| |||| | |||| ||||| |   ||||||||||||||| ||| |||| |||||||||||| ||||||||    
T  31794147 gatcgattattcaatcaaag-atttgggcatcaacgttgcagattcggaggcatgagtattccggtcagtttaattt 31794222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 35499362 - 35499184
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgt 255  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||    |||  | ||||| | |||  ||||||||| |  |||||    
T  35499362 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtaatttcattatctaagtgtggtgatttgttgt 35499264  T
Q  256 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  35499263 tcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatcgattgttca 35499184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 36734801 - 36734683
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||| |||||||||||||| | |||| ||||| |||||||| | ||||||||||||||||||||||| |||| || ||||||||||||||| ||    
T  36734801 ttttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgat 36734702  T
Q  312 tcatattgaaagatcgatt 330  Q
    ||||| |||||||||||||    
T  36734701 tcataatgaaagatcgatt 36734683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 396
Target Start/End: Original strand, 29503378 - 29503613
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||| |  |||||||||||||| ||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |     
T  29503378 tttttctctatatttcaatctaaataattgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 29503476  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgc 359  Q
    |||||||||||| |||||||||| |||| || ||||||||||||| | |||||| ||| |||||||||| |||| | ||||| ||  ||| |||||||||    
T  29503477 tcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgttgc 29503575  T
Q  360 agattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||| | || | ||||  ||||||||||||||||||||    
T  29503576 agatccggaggccatggatattccggtcactttaattt 29503613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 36906035 - 36906210
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||| ||||||||||||||| ||||||||||| |||||||| |||  | ||||| |||||  ||||||||| |  ||||||||    
T  36906035 tctttttctctttatttcaatataaataagtgatttt-cacatagatttaggtttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcg 36906133  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||||||||||||| ||  ||  |||||||||| ||||||||||||||||| ||||||||    
T  36906134 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaaagatcaattgttca 36906210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 49552369 - 49552210
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||| ||| |||||  || | |||||||||||  ||||||| |||||  | |||||||||  |||||||| | |||||||||||||    
T  49552369 ttcaatctaaataagtgaattt-cacattaatctaggttttttctttgtgatttcatcatctaaatgtggtggtttgttgttcgtcgtcttgtgcggcgt 49552271  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| ||| || ||||||||||||||| ||||| ||||||||||||||| ||||    
T  49552270 tgtttgatttctcgttttcttgcggtgttcattttattcacattgaaagatcgattattca 49552210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 32607396 - 32607557
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggc 272  Q
    |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||| | ||||||| |||    
T  32607396 ttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgtggc 32607494  T
Q  273 gttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||||||| |||||||||    
T  32607495 gttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagattgattgttca 32607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 162 - 396
Target Start/End: Complemental strand, 39917555 - 39917320
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||| |  ||||||| |||||  |||||||||||  ||||||||       
T  39917555 tttttctctctaattcaatctaaataagtgatttt-cacatagatctaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgttg 39917457  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgttg 358  Q
    |||||| || ||||||||||||| | || ||  |||||||||||||| ||||||||||||||||||||| |||| | |||| |||||  || ||||||||    
T  39917456 tcttgtacgacgttgtttgattttc-gtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaag-atttgaccgtcaacgttg 39917359  T
Q  359 cagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||| | || ||||||  |||||| |||||||||||||    
T  39917358 cagatccggaggtcatggatattccagtcactttaattt 39917320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 238 - 396
Target Start/End: Original strand, 42719508 - 42719669
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagt 337  Q
    |||||||||||  |||||||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| |    
T  42719508 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaat 42719607  T
Q  338 taaagaatttgcg--caacgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
     ||||| |  | |  ||||||||||||||| || ||| ||  ||||||||||||||||||||    
T  42719608 caaagattcggaggtcaacgttgcagattcggaggtcgtgaatattccggtcactttaattt 42719669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 44907560 - 44907385
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  ||||||||||| |||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  44907560 tctttttctctttatttcaatctaaacaagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 44907462  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||||| |||||||||||||||  | ||  |||||||||||||||||||||||||||||||||||||||||    
T  44907461 gtcgtcttgtgcg-cgttgtttgatttcctatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttca 44907385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 335
Target Start/End: Complemental strand, 30648860 - 30648705
Alignment:
Q  180 tctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtt 278  Q
    ||||||||||||| ||| ||||||||| | | |||||| |||  ||||||| |||||  |||||||||||  |||||||| | |||||||||| ||||||    
T  30648860 tctaaataagtgacttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtt 30648762  T
Q  279 tgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    || |||||| | || ||||||||||||||| ||||||||||||||||||||| ||||    
T  30648761 tgctttcccatcttcttgcggtgttcattttattcatattgaaagatcgattattca 30648705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 335
Target Start/End: Original strand, 12116113 - 12116186
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  12116113 tcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 12116186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 262 - 393
Target Start/End: Original strand, 25849825 - 25849958
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgttgc 359  Q
    |||||||| ||||||||| ||||||||| || ||||||||||||||| ||||||||||||| ||||||| |||| ||||||| ||| ||| |||||||||    
T  25849825 tcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttgattcatattgaaaaatcgattattcaattaaagattttagcgtcaacgttgc 25849924  T
Q  360 agattcagagtcatgtgtattccggtcactttaa 393  Q
    |||| | ||| ||||  |||||| ||||||||||    
T  25849925 agatccggagacatgaatattccagtcactttaa 25849958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 4178478 - 4178653
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| || ||| || | | |||||| |||  ||||||| |||||  |||||||||||  ||| |||     
T  4178478 tctttttctctctatttcaatctaaataagtgatttt-cagataaatctagctttttttctttgtgatttcatcatctaagtgtggtggtttgtttttca 4178576  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||| ||||||||| ||  |||||||||||||| ||| ||||||||||||| ||| ||||    
T  4178577 tcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaaagatccattattca 4178653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 396
Target Start/End: Original strand, 17237720 - 17237957
Alignment:
Q  164 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcat---gatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    |||||||||  |||||||||||||||||||||| ||||||||||| |||||||| ||| |   |||||| |||||  |||||||||||  |||||| | |    
T  17237720 tttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc 17237818  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttg 358  Q
     ||||||||||||||||||||| ||  || ||   |||||||| |||| ||||||||| ||| ||||||| |||| | ||||| ||  ||| ||||||||    
T  17237819 gtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttg 17237918  T
Q  359 cagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    ||||| | ||| | |||  ||||||||||||||||||||    
T  17237919 cagatccggaggctatggatattccggtcactttaattt 17237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 238 - 335
Target Start/End: Complemental strand, 3849002 - 3848905
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||  |||||||| | ||||||||||||||||||| |||||| | || ||||||||||||||| |||| |||||||||||||||| ||||    
T  3849002 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaaagatcgattattca 3848905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 21488082 - 21488179
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||  |||||| | | |||||||||||||||||||||||||||| || |||||||||| |||| ||||||||||||| ||||||| ||||    
T  21488082 agtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattca 21488179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 38855198 - 38855022
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||   ||||||||||||||||| ||||||||||||| | |   |||||||||  ||||||| |||||  |||||| ||||  |||||||    
T  38855198 tctttttctctctatatcaatctaaataagtga-ttttcacatagatctagattttttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 38855100  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |   ||||||| |||||||||| || ||||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  38855099 gttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 38855022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 326
Target Start/End: Complemental strand, 51202363 - 51202249
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||| | | |||||||||||||||||||||||||| |  |  |||||||||||||| ||    
T  51202363 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcatttgat 51202264  T
Q  312 tcatattgaaagatc 326  Q
    |||||||||||||||    
T  51202263 tcatattgaaagatc 51202249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 38440738 - 38440567
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | |||||||||||  ||||||| | |||  |||||||||||  ||||||||     
T  38440738 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttttctttttgatttcatgatcaaagtgtggtggtttgttgttcgt 38440640  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||| |  |||   |||||||||  ||| ||  |||  ||||||||| ||||||||||||||||||||| ||||    
T  38440639 cgtcttatatggc---gtttgatttttcgtcttcgtgcaatgttcatttgattcatattgaaagatcgattattca 38440567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 287
Target Start/End: Original strand, 4172480 - 4172607
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttgg-ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | || |||||||||  ||||||| |||||  |||||||||||  ||| ||||    
T  4172480 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgtttttcg 4172578  T
Q  259 acatcttgtgcggcgttgtttgatttccc 287  Q
     | |||||||||| ||||||| |||||||    
T  4172579 tcgtcttgtgcggtgttgtttcatttccc 4172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 4396463 - 4396362
Alignment:
Q  224 gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 323  Q
    ||||||||||||||| || |||| || |||||| | | ||||||| |||||||||||||||  ||  |||||||||||||| ||| ||||||||||||||    
T  4396463 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaag 4396364  T
Q  324 at 325  Q
    ||    
T  4396363 at 4396362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 266 - 335
Target Start/End: Original strand, 14464529 - 14464598
Alignment:
Q  266 gtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||||| ||||||||| ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  14464529 gtgcggcgttgtttaatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 14464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 47980809 - 47980708
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  47980809 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47980710  T
Q  275 tg 276  Q
    ||    
T  47980709 tg 47980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 47990096 - 47989995
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  47990096 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47989997  T
Q  275 tg 276  Q
    ||    
T  47989996 tg 47989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 47999383 - 47999282
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  47999383 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47999284  T
Q  275 tg 276  Q
    ||    
T  47999283 tg 47999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 276
Target Start/End: Complemental strand, 48008670 - 48008569
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    ||||||||||||||||||||||||||||| || | ||| |||| ||| |||||||||||| ||| |||||||||  |||||||  | |||| ||||||||    
T  48008670 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 48008571  T
Q  275 tg 276  Q
    ||    
T  48008570 tg 48008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 50611578 - 50611404
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||||||| || |||||| | |||||||| |||  ||||||| |||||  |||||| ||||   |||||||    
T  50611578 tctttttctctatatttcaatctaaataagtgatttt-catatagatctaggtttttttctttgtgatttcatcatctaagtgtgatggtttattgttcg 50611480  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||| |||||||| |||| |||| ||||  |  |||||||||||||| ||| ||||||||||||||||| ||||    
T  50611479 tcgtcttatgcggcgt-gtttcattttccgtcctcgtgcggtgttcatttgatttatattgaaagatcgattattca 50611404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 283
Target Start/End: Original strand, 2342405 - 2342528
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| |||||| || | |  |||||||||  ||||||| |||||  |||||||||||  ||| ||||    
T  2342405 tctttttctctctatttcaatctaaataagtgatttt-cacatatatctatatttttttctttgtgatttcatcatctaagtgtggtggtttgttattcg 2342503  T
Q  259 acatcttgtgcggcgttgtttgatt 283  Q
       ||| ||||||||||||||||||    
T  2342504 ttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 322
Target Start/End: Complemental strand, 12947376 - 12947305
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||| | |||||||||||||||||||||||| | | |||||| ||||||| |||  ||||||||||||    
T  12947376 gttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaa 12947305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 322
Target Start/End: Complemental strand, 46322460 - 46322356
Alignment:
Q  216 ttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcat 315  Q
    |||||| |||||||||| |  ||| || ||| ||||||||||| | | |||| ||| |||||||| ||| |||| ||||||||||||||||||  |||||    
T  46322460 ttcttcgtgatttcgtcgt--gagcgtagtgttgcgttgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttcatttggttcat 46322363  T
Q  316 attgaaa 322  Q
    |||||||    
T  46322362 attgaaa 46322356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 326
Target Start/End: Original strand, 52496929 - 52496988
Alignment:
Q  267 tgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||| |||||||||||||| |||||||||| ||||||| ||| |||| ||||||||||||    
T  52496929 tgcgacgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatc 52496988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 29239292 - 29239404
Alignment:
Q  214 ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattc 313  Q
    |||| ||| ||||||| || || ||||| || | || |||||||| | |||||||||||| ||||||||||| ||| |||||| ||||||| |||  |||    
T  29239292 tttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttc 29239391  T
Q  314 atattgaaagatc 326  Q
     ||||| ||||||    
T  29239392 gtattggaagatc 29239404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 35175401 - 35175465
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||| |||||||||||||||  || |||||||||||||| |||  || |||||||||||||    
T  35175401 tcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatc 35175465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 29922015 - 29922118
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || |||||||| | || ||||||   | ||||||| | ||| |||||||||| ||| ||||||||||||  ||||  ||||||||||||    
T  29922015 tgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaa 29922114  T
Q  323 gatc 326  Q
    ||||    
T  29922115 gatc 29922118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 29971168 - 29971271
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || |||||||| | || ||||||   | ||||||| | ||| |||||||||| ||| ||||||||||||  ||||  ||||||||||||    
T  29971168 tgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaa 29971267  T
Q  323 gatc 326  Q
    ||||    
T  29971268 gatc 29971271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 330
Target Start/End: Complemental strand, 20465047 - 20464993
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
    |||||||||  ||| |||| ||||||||||||||| || ||||||||||||||||    
T  20465047 gtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatt 20464993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 44805029 - 44805087
Alignment:
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||  | ||||||||||    
T  44805029 ttgtgcggcgttgtttaatttcacgtcttgttgcggtgttcgtttggtgcatattgaaa 44805087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 328
Target Start/End: Original strand, 1649378 - 1649482
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || |||||||| | ||  ||||||  | |||||||||| |||||| |||||| ||| ||||||  |||||| |||| ||| ||||||||    
T  1649378 tgatttcgtcgtctgagtgtggcgttgtattgttctccgtcttgtgcggtgttgtt-gatttcgcgtcttgttgatgtgttcttttagttcctattgaaa 1649476  T
Q  323 gatcga 328  Q
    ||||||    
T  1649477 gatcga 1649482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 3850616 - 3850560
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 217  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| | ||||||||    
T  3850616 tctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttt 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 303
Target Start/End: Original strand, 54378816 - 54378956
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||||   |||||||||||| ||||||||||||| |||| | |  |||||||||| |||||| |||| | |||||||||| || ||  |||| |     
T  54378816 tttttctctccatttcaatctaaatgagtgatttttcacgtaga-tctaattttttcttcgtgattttgtcacctgagtgtggtgatgtgtatttcgtcg 54378914  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgtt 303  Q
    |||||||||    ||||||||||  ||| || ||||||||||    
T  54378915 tcttgtgcgatcatgtttgatttgtcgtcttattgcggtgtt 54378956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 4821816 - 4821868
Alignment:
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||  ||| |||||||||||||| |||  ||||||||||||||||    
T  4821816 ttgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatc 4821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 335
Target Start/End: Complemental strand, 6910731 - 6910695
Alignment:
Q  299 gtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||| ||||||||||||||||||||| ||||    
T  6910731 gtgttcatttgattcatattgaaagatcgattattca 6910695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 203
Target Start/End: Original strand, 16235323 - 16235351
Alignment:
Q  175 ttcaatctaaataagtgatttttcacata 203  Q
    |||||||||||||||||||||||||||||    
T  16235323 ttcaatctaaataagtgatttttcacata 16235351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 33579891 - 33579943
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||  ||| |||| ||||||||| |||| ||||||||||||||||||    
T  33579891 gtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcga 33579943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 328
Target Start/End: Original strand, 45424809 - 45424861
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||||||| |||||||||||||||||  |||| ||| |||||||| |||||    
T  45424809 gtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcga 45424861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 9e-46; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 162 - 396
Target Start/End: Original strand, 8805789 - 8806025
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||| |  |||||| ||||||||||||||| ||||| ||| | |||||||||||  ||||||| ||||| ||||||||||||  |||||||| |     
T  8805789 tttttctctttatttcaatttaaataagtgatttt-cacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgttgttcgtcg 8805887  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgttgc 359  Q
    ||||||||| |||||||||||||||||| ||  || ||||||||||| ||||||||||||||||||||| |||| | ||||| ||| ||| |||||||||    
T  8805888 tcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgc 8805987  T
Q  360 agattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||| || ||||||  ||||||||||||||||||||    
T  8805988 agattcggaggtcatggatattccggtcactttaattt 8806025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 162 - 396
Target Start/End: Complemental strand, 9986504 - 9986264
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttgg----ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||| |||||  |||||||||||||||||| ||||||||||||| | ||    |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  9986504 tttttatctctaattcaatctaaataagtga-ttttcacatagatctaggtttattttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 9986406  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 355  Q
    | | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| ||||||| ||  ||| |||||    
T  9986405 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaattaaagatttgggcgtcaacg 9986306  T
Q  356 ttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||||| || | |||| |||||||||||||||||||||    
T  9986305 ttgcagattcggaggccatgggtattccggtcactttaattt 9986264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 162 - 396
Target Start/End: Original strand, 17319246 - 17319479
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||| |||  |||||||||||||| |   ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||| |||||||  |     
T  17319246 tttttctatctatttcaatctaaataacta--ttttcacatagatctaggttttttcttcatgatttcgtcatctgagtgtggtggtgtgttgttcttcg 17319343  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgttg 358  Q
    |||||||| |||||| ||||||| |||| |||||||||||||||||| | |||||||| |||||||||| |||| | |||  ||||| |   ||||||||    
T  17319344 tcttgtgcagcgttg-ttgattttccgtcttgttgcggtgttcatttgactcatattg-aagatcgattattcaatcaaaagatttgagcgtcaacgttg 17319441  T
Q  359 cagattcagagtcatgtgtattccggtcactttaattt 396  Q
    ||||| |  |  |||| |||||||||||||||||||||    
T  17319442 cagatccgaaagcatgggtattccggtcactttaattt 17319479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 163 - 335
Target Start/End: Original strand, 22421659 - 22421830
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |||    
T  22421659 ttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcat 22421757  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||| |||| ||||||||||||||| | || ||||||||||||||| |||| |||||||||||||||| ||||    
T  22421758 cttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaaagatcgattattca 22421830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 164 - 396
Target Start/End: Complemental strand, 2808627 - 2808394
Alignment:
Q  164 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatc 263  Q
    |||||||||  |||| ||||||||||||||||| ||||||||| | ||||||| |||  ||||||| |||||  |||||||||||  |||||||| | ||    
T  2808627 tttctctctatttcagtctaaataagtgatttt-cacatagatctaggttttt-ctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtc 2808530  T
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacgttgcag 361  Q
    ||||||||||||||||||||| ||||||| ||||| ||||||| | ||||||||||||||||||||| |||| | ||||| ||| ||| |||||||||||    
T  2808529 ttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaaagatcgattattcaatcaaagattttggcgtcaacgttgcag 2808430  T
Q  362 attcag-agtcatgtgtattccggtcactttaattt 396  Q
    || | | || ||||  ||||||| ||||||||||||    
T  2808429 atccggaagccatggatattccgatcactttaattt 2808394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 7015871 - 7015697
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||| ||||||| ||||||||||| ||||||||| |  ||||||| |||||  |||||||||||  ||||||||     
T  7015871 tctttttctctttatttcaatctaaataattgatttt-cacatagatttaggttttttccttgtgatttcatcatctaagtgtggtggtttgttgttcgt 7015773  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||||||||||| ||||||| ||||    
T  7015772 cgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaatatcgattattca 7015697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 330
Target Start/End: Complemental strand, 459432 - 459265
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||||  |||| | |||||||| |||||| ||||||||| | |||||||| |||| ||||||||||||| |||||| |||||| | |||||| |     
T  459432 ttttctctctatttcattttaaataagcgatttt-cacatagatataggtttttttcttcgtgatttcgtcatctgagtgtcgtggtgtgctgttcgtcg 459334  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
    |||||| || ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||    
T  459333 tcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatcgatt 459265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 3270374 - 3270151
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | |||||||| ||  ||||||| |||||  ||||||||||   |||||||| | | ||||| |||||    
T  3270374 ttcaatctaaataagtgatttt-cacatagatctaggttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgt 3270276  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtc 371  Q
    |||||||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || |||    
T  3270275 tgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtc 3270176  T
Q  372 atgtgtattccggtcactttaattt 396  Q
    |||  ||||||||||||||||||||    
T  3270175 atggatattccggtcactttaattt 3270151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 34598908 - 34599082
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | | |||||| ||  ||||||| |||||  |||||||||||  |||||||      
T  34598908 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgttgttcat 34599006  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||||||||||||||||| || | ||  |||||||||||||| ||||||||||||||||||||| ||||    
T  34599007 cgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaaagatcgattattca 34599082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 39642020 - 39641844
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||| ||||||| ||||||| ||||||||| | ||||||||  |||| ||||||| ||||| || ||| |||||   ||||||    
T  39642020 tctttttctctctatttcaatttaaataaatgatttt-cacatagatctaggttttttttcttcgtgatttcatcatctgaatgttgtggtagtttgttc 39641922  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | ||||||||||| | |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||||    
T  39641921 gtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattgaaagatcaattattca 39641844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 20047243 - 20047068
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| |||| |||||||||| |||||||| | |  ||||||| |||||  |||||||||||  ||||||||    
T  20047243 tctttttctctctttttcaatctaaataagtgactttt-acatagatttaggtttttttcattgtgatttcatcatctaagtgtggtggtttgttgttcg 20047145  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||||||||  || || || |||||||||||| |||| |||||||||||||||| ||||    
T  20047144 tcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatcgattattca 20047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 27249312 - 27249137
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| |||  | |||||   |||  ||||||||| |  ||||||||    
T  27249312 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtaatttcaagatctaagtgtggtgatttgttgttcg 27249214  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | |||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||||||||    
T  27249213 tcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttca 27249137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 329
Target Start/End: Original strand, 6173552 - 6173721
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  6173552 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatcgaagtgtggtggtttgttgttcg 6173650  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgat 329  Q
       ||||||| ||||||||||||||| || | ||  |||||||||||||| ||||||||||||||||||||    
T  6173651 ttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatcgat 6173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 30420597 - 30420773
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  30420597 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 30420695  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||||||||||||||||||| |||| ||  |||||||||||||| |||||||||||||||| |||||||||    
T  30420696 gtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatagattgttca 30420773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 36233925 - 36234167
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt----cttcatgatttcgtcatccgagtgtggtggtgcgttgt 255  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | ||||||    |||  | ||||| |||||  ||||||||| |   ||||    
T  36233925 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttttctttgtaatttcatcatctaagtgtggtgattttttgt 36234023  T
Q  256 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caa 353  Q
    ||| | |||||||||||||||||||||||||||| ||  |||||||||||||| |||||||||||||||||||||||||| | ||||| ||  ||| |||    
T  36234024 tcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattgttcaatcaaagatttgggcgtcaa 36234123  T
Q  354 cgttgcagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    |||||||||| | ||| | |||  ||||||||||||||||||||    
T  36234124 cgttgcagatccggaggcaatggatattccggtcactttaattt 36234167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 41430948 - 41431123
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggt-tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||| | |||| |||||||| | ||| ||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  41430948 tctttttctctatatttcaatctaaataagtcactttt-acatagatctaggtgtttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 41431046  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||||||| ||||    
T  41431047 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattccaattgaaagatcgattattca 41431123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 3725101 - 3725275
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||| ||||||||||||||| ||||||||| ||| |||||||||  ||||||| || ||  |||||||||||  ||||||||     
T  3725101 tctttttctctctatttcaatataaataagtgatttt-cacatagatcttgattttttctttgtgatttcatcgtctaagtgtggtggtttgttgttcgt 3725199  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
      |||||| ||||||||||||||||| ||| ||  || ||||||| ||| ||||||||||||||||||||| ||||    
T  3725200 tgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaaagatcgattattca 3725275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 343
Target Start/End: Original strand, 4192759 - 4192940
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||||||| |||||| |||| |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  4192759 tctttttctctatatttcaatctaaataagtgatttt-cacatatatttaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 4192857  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaaga 343  Q
    | ||||||| || ||||||||||||||||| || |||| |||||||| | |||||| ||| |||||||||| ||| || |||||    
T  4192858 cgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcatctgattcattttg-aagatcgattattccgtcaaaga 4192940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 327
Target Start/End: Complemental strand, 26025570 - 26025404
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  ||||||||||||||||| |||| ||||||||| | |||||||||||  ||||||| ||||   |||||||| ||  |||| |||     
T  26025570 tctttttctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatgtaagtgtggtagtttgttggtcgt 26025472  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 327  Q
    | |||||||||||||||||||||||  ||| || ||||||||||||||| |||||| |||||||||||    
T  26025471 cgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatcg 26025404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 162 - 346
Target Start/End: Original strand, 8308097 - 8308276
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||| |||||  ||||||||||||  |||||||| ||||||||| | |||||||||||| ||||||||||||| || ||||| |  | |||||||| |     
T  8308097 tttttttctctaattcaatctaaat--gtgatttt-cacatagatctaggttttttcttcgtgatttcgtcatctgactgtggcgc-gtgttgttcgtcg 8308192  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt 346  Q
    |||||||| |||||||||||||||  |||||||||| || ||||||| ||||||||||||||||||||| |||| | ||||||||    
T  8308193 tcttgtgcagcgttgtttgatttct-gtattgttgcagttttcatttgattcatattgaaagatcgattattcaatcaaagaatt 8308276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 32913177 - 32913335
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||| ||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| | ||||||||||||     
T  32913177 ttcaatttaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgc 32913275  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||| |||| || || |||||||||| | |||||||||| |||||||||| ||||    
T  32913276 tgtttgattttccgtcttcttacggtgttcatctgattcatattg-aagatcgattattca 32913335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 396
Target Start/End: Complemental strand, 8971769 - 8971550
Alignment:
Q  178 aatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgt 277  Q
    ||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  ||| |||||||  |||||||| | |||||||| |||||||    
T  8971769 aatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtatggtggtttgttgttcgtcgtcttgtgcagcgttgt 8971671  T
Q  278 ttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cgcaacgttgcagattcaga-gtcatg 374  Q
    |||||||||| | ||  |||| ||||||||| ||||||| ||||||||| |||  ||| ||||||| || |    ||||||||||||| |||| |||||     
T  8971670 ttgatttcccatcttcgtgcgatgttcatttgattcataatgaaagatcaatt-atcaattaaagatttggatgtcaacgttgcagatccagatgtcatt 8971572  T
Q  375 tgtattccggtcactttaattt 396  Q
      ||||||||||||||||||||    
T  8971571 gatattccggtcactttaattt 8971550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 396
Target Start/End: Complemental strand, 3269251 - 3269033
Alignment:
Q  182 taaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 279  Q
    ||||||||||||||| ||||||||| | |||||||| ||  ||  ||||| |||||  ||||||||||   |||||||| | | ||||| ||||||||||    
T  3269251 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269153  T
Q  280 gatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtg 376  Q
    ||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || ||||||      
T  3269152 gattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatgga 3269053  T
Q  377 tattccggtcactttaattt 396  Q
    ||||||||||||||||||||    
T  3269052 tattccggtcactttaattt 3269033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 396
Target Start/End: Complemental strand, 3269810 - 3269592
Alignment:
Q  182 taaataagtgatttttcacatagattttggttttttcttcatg--atttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt 279  Q
    ||||||||||||||| ||||||||| | |||||||| ||  ||  ||||| |||||  ||||||||||   |||||||| | | ||||| ||||||||||    
T  3269810 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269712  T
Q  280 gatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcaga-gtcatgtg 376  Q
    ||||| |||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||||||||| | || ||||||      
T  3269711 gattttccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacgttgcagatccggaggtcatgga 3269612  T
Q  377 tattccggtcactttaattt 396  Q
    ||||||||||||||||||||    
T  3269611 tattccggtcactttaattt 3269592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 40660077 - 40659918
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  ||||||||| |  |||||||| | |||||||||||||    
T  40660077 ttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtggtgctttgttgttcgtcgtcttgtgcggcgt 40659979  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||| ||  | || || |||||| |||| || ||||||||||||| ||||    
T  40659978 tgtttgatttcccgtcttcgtccgatgctcatttgattcttactgaaagatcgattattca 40659918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 45128124 - 45128299
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  |||||||||||  ||||||||    
T  45128124 tctttttctctttatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 45128222  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||| | | || ||||||||||||||| |||| |||||||| ||| ||| ||||    
T  45128223 tcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcctattgaaatatcaattattca 45128299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 213 - 348
Target Start/End: Complemental strand, 9374664 - 9374529
Alignment:
Q  213 tttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaatt 312  Q
    ||||||||| |||||||||||||  | |||||||||| |||||||| ||||||||||| | ||||||| ||| |||| |||||| ||||||||||| |||    
T  9374664 tttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttgttgtggtgttcatttgatt 9374565  T
Q  313 catattgaaagatcgattgttcagttaaagaatttg 348  Q
    ||| |||||||| ||||| |||| | ||||| ||||    
T  9374564 cattttgaaagaacgattattcaatcaaagattttg 9374529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 335
Target Start/End: Original strand, 27949358 - 27949521
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttc-at---gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcg 270  Q
    |||||||||||||||||||||| ||||||||| | |||||||| ||| ||   |||||| |||||  |||||||||||   ||||||| | |||||| ||    
T  27949358 ttcaatctaaataagtgatttt-cacatagatctaggtttttttttctattgcgatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacg 27949456  T
Q  271 gcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||||||| || ||||| ||||||||| |||||||| |||||||| ||| ||||    
T  27949457 gcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatatcgaaagatcaattattca 27949521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 224 - 330
Target Start/End: Complemental strand, 31580686 - 31580580
Alignment:
Q  224 gatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaag 323  Q
    |||||| |||||  |||||||||||  |||||||| | |||||||||||||||||| ||||||||||||  |||||||||||||| ||| ||||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaaag 31580587  T
Q  324 atcgatt 330  Q
    |||||||    
T  31580586 atcgatt 31580580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 194 - 394
Target Start/End: Original strand, 25086991 - 25087194
Alignment:
Q  194 ttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattg 293  Q
    ||||||||||||| | |||||||| ||  ||||||| |||||  |||||||||||  |||||||| | ||||||||| ||||||||| |||||| | ||     
T  25086991 ttttcacatagatctaggttttttatttttgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgctttcccttcttc 25087090  T
Q  294 ttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcag-agtcatgtgtattccggtcactt 390  Q
    |||| ||||||| || ||||||||| ||||||||||| |||| | || || || | || ||||||||||||||||| || ||||  |||||| |||||||    
T  25087091 ttgcagtgttcaatttattcatattaaaagatcgattattcaatcaatgatttggacgtcaacgttgcagattcagaagccatggatattccagtcactt 25087190  T
Q  391 taat 394  Q
    ||||    
T  25087191 taat 25087194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 318
Target Start/End: Complemental strand, 32197955 - 32197798
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||| ||||||| ||||||||  |||| |||| |||||||||||  |||||||||||||  |||||||| ||| ||||  |      
T  32197955 tctttttctctttatttcaatataaataaatgatttttg-cataaatttaggttttttctttgtgatttcgtcatctaagtgtggtagtgtgttgcccat 32197857  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatatt 318  Q
    | ||||| ||||| ||||||||||||| || |||||||||||||||||| |||||||||    
T  32197856 cgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatatt 32197798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 335
Target Start/End: Complemental strand, 37614209 - 37614111
Alignment:
Q  237 gagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||| || |||||||  | ||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||| |||| ||||    
T  37614209 gagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagattgattattca 37614111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 283
Target Start/End: Complemental strand, 40626189 - 40626066
Alignment:
Q  159 gtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||||||  ||||||||||||||| |||||| ||||||||| |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  40626189 gtctttttctctctatttcaatctaaataagggatttt-cacatagatctacgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 40626091  T
Q  259 acatcttgtgcggcgttgtttgatt 283  Q
     | |||||||||| |||||||||||    
T  40626090 tcgtcttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 21570569 - 21570394
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttg--gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | |   |||||| ||  ||||||| |||||  |||||||||||  |||||||    
T  21570569 tctttttctctatatttcaatctaaataagtga-ttttcacatagatctagattttttttttttgtgatttcatcatctaagtgtggtggtttgttgttc 21570471  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | | ||||||| | ||||||||  |||||||| || | ||||||||||||| |||||||||| |||||||||| ||||    
T  21570470 gtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatttgattcatattg-aagatcgattattca 21570394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 314
Target Start/End: Original strand, 4228105 - 4228207
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  ||||||| |||||  |||||| ||||  |||||||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||    
T  4228105 ttttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgat 4228204  T
Q  312 tca 314  Q
    |||    
T  4228205 tca 4228207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 24587680 - 24587790
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    ||||||||||||||||||||  || ||||| ||   || | | |||| | |||||||  |||||| |||||||| ||||||||||||||||||||||| |    
T  24587680 ttttttcttcatgatttcgttgtctgagtgcggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagt 24587779  T
Q  312 tcatattgaaa 322  Q
    |||||||||||    
T  24587780 tcatattgaaa 24587790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 29574759 - 29574657
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| |||||||| || | || |||||||| | ||||||||||| |||||||||||| | | ||||||| |||||  ||| |||||||||||||    
T  29574759 tgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaa 29574660  T
Q  323 gat 325  Q
    |||    
T  29574659 gat 29574657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 27477075 - 27477243
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||||||| | | |||||||||  ||||||| |||||      |||||||  |||||| |     
T  27477075 tctttttctctatatttcaatctaaataagtaatttt-cacatagatctagattttttctttgtgatttcatcatc------tggtggtttgttgtttgt 27477167  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgtt-gcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
      |||||||||||| |||||||||| |||| || || ||||||||||||| |||||||||| |||||||||| ||||    
T  27477168 agtcttgtgcggcgctgtttgattttccgtcttctttgcggtgttcatttgattcatattg-aagatcgattattca 27477243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 238 - 304
Target Start/End: Complemental strand, 12648036 - 12647970
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttc 304  Q
    |||| |||| || |||||||| | |||||||||||||||||||||||| ||| ||||||||||||||    
T  12648036 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttc 12647970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 396
Target Start/End: Complemental strand, 84227 - 84103
Alignment:
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgcagattcaga-gt 370  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||||||| ||||||| |||| | ||||| || | || ||||||||||||| | || ||    
T  84227 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaa-atcgattattcaatcaaagatttggacgtcaacgttgcagatccggatgt 84129  T
Q  371 catgtgtattccggtcactttaattt 396  Q
    ||||  |||||||| |||||||||||    
T  84128 catggatattccggccactttaattt 84103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 4264444 - 4264544
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || ||||| | || ||||||||||| | ||||||||||   ||||||||||| ||| || |||||||||||||||  ||| ||||||||    
T  4264444 tgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaa 4264540  T
Q  323 gatc 326  Q
    ||||    
T  4264541 gatc 4264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 335
Target Start/End: Complemental strand, 32679169 - 32679096
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||| ||||||||||| ||||| || || ||||| ||||||||| |||| |||||||||||||||| ||||    
T  32679169 tcttgtgtggcgttgtttgctttcctgtcttcttgcgatgttcattttattcttattgaaagatcgattattca 32679096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 305
Target Start/End: Original strand, 10248083 - 10248211
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||| |||||||||| | | |||||| | ||||||| |||| ||| ||||||||| |||||||| |||| |||||| | | |||| |  |||||    
T  10248083 ttcaatctaattaagtgatttct-atatagatctaggttttt-cttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtcttatatggcgt 10248180  T
Q  275 tgtttgatttcccgtattgttgcggtgttca 305  Q
    | ||| ||||||||| || ||||||||||||    
T  10248181 ttttttatttcccgttttattgcggtgttca 10248211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 327
Target Start/End: Complemental strand, 43397247 - 43397146
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| ||  ||||||| | || |||||||| | ||||||| ||||||   ||||||| ||| |||| ||||||||| |||| ||||||||||||    
T  43397247 tgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaa 43397151  T
Q  323 gatcg 327  Q
    |||||    
T  43397150 gatcg 43397146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 251 - 324
Target Start/End: Complemental strand, 28534057 - 28533984
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaaga 324  Q
    |||||||| | ||||||||| ||||||||||||||   | |||||||||||||| ||| |||| ||||||||||    
T  28534057 gttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaaga 28533984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 31581880 - 31581812
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttc 229  Q
    |||||||||||||  |||||||||||||||||| ||||||||||||| | | |||||||||  |||||||    
T  31581880 tctttttctctctatttcaatctaaataagtga-ttttcacatagatctagtttttttctttttgatttc 31581812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 32680743 - 32680644
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttgg--ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  ||||||||||||||||||  |||||||||||| | ||  |||||||||  ||||||| |||||  |||||||||||  |||||||    
T  32680743 tctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 32680645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 322
Target Start/End: Original strand, 18113891 - 18113951
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    ||||||||||||||||||||||| |||| || |||||||||| || |  ||||||||||||    
T  18113891 tcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaaa 18113951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 325
Target Start/End: Original strand, 18694970 - 18695139
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacataga-------ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttg 254  Q
    |||||||||||  ||||||||||||||||||||||| |||||||       ||||  |||||| || ||||||||||||   ||||| ||  |||  |||    
T  18694970 tttttctctctatttcaatctaaataagtgattttt-acatagatcacgatttttttttttttttttatgatttcgtcaattgagtgcggcagtgttttg 18695068  T
Q  255 ttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
    |||| | ||||||||| | || |||||||| | || ||| || |||||||||||||||  |||||||||||    
T  18695069 ttcgtcgtcttgtgcgacattatttgattttcagttttgatgtggtgttcatttaatttctattgaaagat 18695139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 41712923 - 41712828
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttgg-ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||  || ||||||||||||||| ||||||||||||||| || ||||||||   ||||||| |||||  |||||||||||  ||||||||    
T  41712923 ttttctctctattttaatctaaataagtga-ttttcacatagatttaggtttttttctctgtgatttcctcatctaagtgtggtggtttgttgttcg 41712828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 38293521 - 38293644
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||| ||||||| || | ||||||  ||| |  |||||||| | ||||||| | ||||||||||| |||||| || ||||  |||||||||  |    
T  38293521 ttttttcttcgtgatttcttcgtacgagtgcagtgttatgttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgcaatgttcatttggt 38293620  T
Q  312 tcatattgaaagatcgattgttca 335  Q
    | ||||| |||||| |||||||||    
T  38293621 ttatattaaaagattgattgttca 38293644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 23903416 - 23903478
Alignment:
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    ||||||||||||||||||| ||  |  |||||| ||| ||||||| |||||||||||||||||    
T  23903416 ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaagatc 23903478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 322
Target Start/End: Original strand, 37994237 - 37994347
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||| ||||| |||||||||  || ||||| || | || |||||||| | || ||| |||| |||||||||||  | | ||||||| |||||||||| ||    
T  37994237 ttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgat 37994336  T
Q  312 tcatattgaaa 322  Q
    |||||||||||    
T  37994337 tcatattgaaa 37994347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 322
Target Start/End: Original strand, 10929624 - 10929733
Alignment:
Q  214 ttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgttt-gatttcccgtattgttgcggtgttcatttaatt 312  Q
    |||| ||| |||||||||| || ||||| |||| || |||||||| | |||||| || |||||||| |||||  ||| |||||||||||||| |||  ||    
T  10929624 tttttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggtt 10929723  T
Q  313 catattgaaa 322  Q
    ||| ||||||    
T  10929724 catgttgaaa 10929733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 41327510 - 41327575
Alignment:
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||| || || |||||||||||| |||||||||||||||||| |||  ||  ||||||||||||    
T  41327510 atcttgcgctgcattgtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatc 41327575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 17261588 - 17261631
Alignment:
Q  291 ttgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||    
T  17261588 ttgttgcggtgttaatt-aattcatattgaaagatcgattattca 17261631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 36323799 - 36323850
Alignment:
Q  180 tctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtc 232  Q
    ||||||||||||||||| ||||||||||| ||||||||||   ||||||||||    
T  36323799 tctaaataagtgatttt-cacatagatttaggttttttctctgtgatttcgtc 36323850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 5e-44; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 15570828 - 15571064
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||  ||||||||||||||||| | |||||||||||  ||||||||||| ||||||||||||||| ||||||||     
T  15570828 tctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttgtgatttcgtcacccgagtgtggtggtgtgttgttcgt 15570927  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgtt 357  Q
    | |||| ||||| ||||||||| ||||| |||||||| ||||||||||| |||||||||| |||||| ||| |||| | ||| |||| | ||  ||||||    
T  15570928 cgtcttatgcggtgttgtttga-ttcccatattgttgtggtgttcatttgattcatattg-aagatctattattcaatcaaataattggacgttaacgtt 15571025  T
Q  358 gcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    ||| || | |||||||||||||||| |||||||||||||    
T  15571026 gcacatccggagtcatgtgtattccagtcactttaattt 15571064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 163 - 363
Target Start/End: Original strand, 42886401 - 42886600
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  ||||||| ||||||||| |||| ||||||||||| ||||||| |||| ||||||| ||||| ||||||||||||| |||||||| | |    
T  42886401 ttttctctctatttcaatcaaaataagtgctttt-cacatagatttaggttttt-cttcgtgatttcatcatctgagtgtggtggtgtgttgttcgtcgt 42886498  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg-caacgttgcag 361  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||| ||||||||||| |||| | ||||| ||  || |||||||||||    
T  42886499 cttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatattaaaagatcgattattcaatcaaagatttgacgtcaacgttgcag 42886598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 2057999 - 2057760
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| ||| |||||||| |||||  |||||||||||  ||||||||    
T  2057999 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttatgatttcatcatctaagtgtggtggtttgttgttcg 2057901  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgt 356  Q
     | ||||| |||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | ||||| ||  ||| ||||||    
T  2057900 tcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaagatttgagcgtcaacgt 2057801  T
Q  357 tgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||| |||| | ||||  ||||||||||||| ||||||    
T  2057800 tgcagatccagatgccatggatattccggtcactataattt 2057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 163 - 335
Target Start/End: Complemental strand, 7613214 - 7613044
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  ||||||||||||||||| ||||||| |||||| | ||||||| ||||||||||| |||||| ||||||||||||| |||||||| | |    
T  7613214 ttttctctctgtttcaatctaaataagtg-tttttcatatagatctaggttttt-cttcatgattttgtcatctgagtgtggtggtgtgttgttcgtcgt 7613117  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||   ||||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  7613116 cttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatcgattattca 7613044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 162 - 396
Target Start/End: Complemental strand, 27267019 - 27266781
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||  |||||||||||||||||||||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  ||||||||     
T  27267019 tttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 27266921  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg--cg-caacgt 356  Q
    | |||||||||||  ||||||||||||||| ||  |||||||||||||| ||||||||||||||||||||| |||| | |||| |||||  || ||||||    
T  27266920 cgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatcgattattcaatcaaag-atttgaccgtcaacgt 27266822  T
Q  357 tgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||| | || ||||||  ||||||||||||||||||||    
T  27266821 tgcagatccggaggtcatggatattccggtcactttaattt 27266781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 30371643 - 30371819
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | ||||||||  |||  | ||||| |||||  ||||||||| |  |||||||    
T  30371643 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttc 30371741  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||||||||||||||||||||||| | ||  |||||||||||||||||||||||||||||||||||||||||    
T  30371742 gtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaaagatcgattgttca 30371819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 335
Target Start/End: Complemental strand, 27576507 - 27576336
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacat 262  Q
    ||||||||||  |||||| |||||||||||| || ||||||||| | | |||||||||  ||||||||||||  ||||||||||||  |||||||  |      
T  27576507 ttttctctctatttcaatgtaaataagtgatatt-cacatagatctagattttttctttgtgatttcgtcatatgagtgtggtggtatgttgttcttcta 27576409  T
Q  263 cttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||| ||||    
T  27576408 cttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaaagatcgattattca 27576336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 19259974 - 19259734
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| |  |||||||  ||   ||||||| |||||  |||||||||||  |||||||    
T  19259974 tctttttctctctatttcaatctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatctaagtgtggtggtttgttgttc 19259875  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacg 355  Q
    | | |||||||||| ||||||||||| ||||| ||  ||||||||| |||| ||||||||||||||||||||| |||| | ||||| ||  ||| |||||    
T  19259874 gtcgtcttgtgcggtgttgtttgatt-cccgtcttcgtgcggtgtttatttgattcatattgaaagatcgattattcaatcaaagatttgggcgtcaacg 19259776  T
Q  356 ttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||| || | | ||||  ||||||||||||||||||||    
T  19259775 ttgcagatccaaaggccatggatattccggtcactttaattt 19259734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 30298142 - 30298287
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | ||||||||||| |||||||| |||||  |||||||||||  |||||||| | ||||||||||||     
T  30298142 ttcaatctaaataagtgatttt-cacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgc 30298240  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 321  Q
    |||||||||| |||| || |||||||||| |||| ||||||||||||    
T  30298241 tgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 30298287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 21060442 - 21060205
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||||||| |||| || |||||  |||||||||||  ||||||||     
T  21060442 tctttttctctatatttcaatctaaataagtgatttt-cacatagatgtaggttttttcttcgtgatgtcatcatctaagtgtggtggtttgttgttcgt 21060344  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgtt 357  Q
    | |||||||||||  | ||||||||||||| || |||| |||||||| |||||||| ||| |||||||||| |||| | ||||| ||  ||| |||||||    
T  21060343 cgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttcatctaattcattttg-aagatcgattattcaatcaaagatttgggcgtcaacgtt 21060245  T
Q  358 gcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||| | || | ||||  ||||||||||||||||||||    
T  21060244 gcagatccggaggccatggatattccggtcactttaattt 21060205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 162 - 335
Target Start/End: Original strand, 16981211 - 16981383
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    |||||||||||  |||||||||||||||||||||  |||||| || | |||||||||||  ||||||| |||||  |||| ||||||  |||||||| |     
T  16981211 tttttctctctatttcaatctaaataagtgattta-cacatatatctaggttttttctttgtgatttcatcatctaagtgcggtggtttgttgttcgtcg 16981309  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| |||||| |||| |||| || ||||||||||| ||| ||||||||||||||||||||| ||||    
T  16981310 tcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatcgattattca 16981383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 18677627 - 18677387
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--cttcatgatttcgtcatccgagtgtggtggtgcgttgttc 257  Q
    |||||||||||||  || ||||||||||||||||||| ||||||||| | ||||||||  |||  ||||||| |||||  |||||||||||  |||||||    
T  18677627 tctttttctctctattttaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttc 18677529  T
Q  258 gacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaattt-gcg-caacg 355  Q
    | | ||||||| | ||||||||||||| |||| ||  | |||||||||||| ||||||||||||||||||||| || | | ||| ||||| ||| ||||     
T  18677528 gtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatcgattatttaatcaaataatttggcgtcaaca 18677429  T
Q  356 ttgcagattcagag-tcatgtgtattccggtcactttaattt 396  Q
    |||||||| | |||  ||||  ||||||||||||||||||||    
T  18677428 ttgcagatccggagaccatggatattccggtcactttaattt 18677387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 396
Target Start/End: Complemental strand, 20257855 - 20257618
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||||||| ||||||||| | |||||||| |||||| |||| | |||| ||||||||  | | ||||||||    
T  20257855 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcattattttgccatctgagtgtggcagcgtgttgttcg 20257757  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacg 355  Q
     | ||||||||| | || || ||||| |||| |||||||||||||||||| ||||||||||||  ||||||| |||| | |||| |||||||   |||||    
T  20257756 tcgtcttgtgcgacattatt-gattttccgtcttgttgcggtgttcatttgattcatattgaagtatcgattattcaatcaaag-atttgcgcgtcaacg 20257659  T
Q  356 ttgcagattcagagtcatgtgtattccggtcactttaattt 396  Q
    ||| |||| | ||  | || |||||||||||||||||||||    
T  20257658 ttgtagatccggaaacgtgggtattccggtcactttaattt 20257618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 160 - 325
Target Start/End: Complemental strand, 36344650 - 36344487
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||| ||||| ||||| ||| |  ||||||||||  ||||||  |||||  |||||||||||  ||||||||     
T  36344650 tctttttctctatatttcaatctaaataagttatttt-cacatggatctaagttttttctttgtgattta-tcatctaagtgtggtggtttgttgttcgt 36344553  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
    | ||||||||||||||||||||||| |||| || ||||||||||||||| ||||||||||||||||    
T  36344552 cgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 7150496 - 7150321
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| |  ||||||| |||  || |||| |||||  |||||||||||  ||||||||    
T  7150496 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaagtttttttctttgtgctttcatcatctaagtgtggtggtttgttgttcg 7150398  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||||||||||||||| ||||  ||||||||||| ||| ||||    
T  7150397 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcccattgaaagatcaattattca 7150321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 175 - 396
Target Start/End: Complemental strand, 35475482 - 35475260
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| ||||    ||||||||||  |||||||| | | || |||||||     
T  35475482 ttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatttacgtgtggtggtttgttgttcgtcgttttatgcggcgc 35475384  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttgcagattcag-agtc 371  Q
    ||||||||||| ||| || ||||||||||||||| ||||||||| ||||||||||| |||| | ||||| ||  ||| ||||||||||||||||| || |    
T  35475383 tgtttgatttctcgtcttcttgcggtgttcatttgattcatatt-aaagatcgattattcaatcaaagatttgggcgtcaacgttgcagattcagaagcc 35475285  T
Q  372 atgtgtattccggtcactttaattt 396  Q
    |||  |||||| |||||||||||||    
T  35475284 atggatattccagtcactttaattt 35475260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 19281105 - 19280931
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    |||||||||||||  |||||||||||||||||| ||| |||| | || | |||||||||||  ||||||| |||||  |||||||||||  ||||||||     
T  19281105 tctttttctctctatttcaatctaaataagtgacttt-cacacatatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgt 19281007  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||||||| |||||||||| ||| || | || |||| |||||||||| |||| |||||||||||||||| ||||    
T  19281006 cgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaaagatcgattattca 19280931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 335
Target Start/End: Original strand, 34881688 - 34881811
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||||||||||||||||| ||  |||||||||||||| ||    
T  34881688 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgat 34881787  T
Q  312 tcatattgaaagatcgattgttca 335  Q
    ||||||||||||||| ||| ||||    
T  34881788 tcatattgaaagatcaattattca 34881811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 206 - 335
Target Start/End: Complemental strand, 41184555 - 41184426
Alignment:
Q  206 ttttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttca 305  Q
    |||| ||||||||||  ||||||| |||||  |||||||||||  |||||||| | |||||||||||||||||||||||||||| ||  || |||||||     
T  41184555 tttttgttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcg 41184456  T
Q  306 tttaattcatattgaaagatcgattgttca 335  Q
    ||| ||||||||||||||||||||| ||||    
T  41184455 tttgattcatattgaaagatcgattattca 41184426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 163 - 335
Target Start/End: Original strand, 43148652 - 43148824
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcgaca 261  Q
    ||||||||||  ||| |||||||||||||| ||| |||||| |||| | |||||| |||  ||||||| |||||  |||||||||||  |||||||| |     
T  43148652 ttttctctctatttcgatctaaataagtgacttt-cacatatatttagatttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcg 43148750  T
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||| |||||||| |||||||| || ||||| ||||||||| |||| |||||||||||||||| ||||    
T  43148751 tcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattgaaagatcgattattca 43148824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 310
Target Start/End: Original strand, 11767726 - 11767878
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||||||| |  |||||||||||||||||||||||||| ||||| | || |||||||||| |||| ||| |||| ||||||||||||| ||||||||    
T  11767726 tctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttttcttcgtgatgtcgccatctgagtgtggtggtgtgttgttcg 11767825  T
Q  259 acatcttgtgcggcgttgtttgatttcccgta-ttgttgcggtgttcatttaa 310  Q
     | |||||| ||  |||||||||||| ||||| || ||||||| |||||||||    
T  11767826 tcgtcttgtacgaagttgtttgattttccgtattttttgcggtattcatttaa 11767878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 26578168 - 26578345
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatg---atttcgtcatccgagtgtggtggtgcgttgtt 256  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | |||||||| ||| |    ||||| |||||  | ||| ||| |  ||||||    
T  26578168 tctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaaatgtagtgatttgttgtt 26578266  T
Q  257 cgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    || | ||||||||| |||||||||||||||||| ||  ||| |||||||||| ||||||||||||||||||||||||||    
T  26578267 cgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatcgattgttca 26578345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 330
Target Start/End: Original strand, 7246877 - 7247047
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  ||||||||| |  ||||||||    
T  7246877 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcg 7246975  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
     | |||||||||||||| |||  ||||| || || ||||||||||||||| |||| |||||| |||||||||    
T  7246976 tcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttcattttattcctattgatagatcgatt 7247047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 43261978 - 43261805
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||| |||||  |||||||||||||||||||||| ||||||||| | ||||||  |||  ||||||  |||||  |||||||||||  ||||||||     
T  43261978 tctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttc-ctttgtgattttatcatctaagtgtggtggtttgttgttcgt 43261881  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    | |||| ||||| |||||||||||| |||| || |||||||||| |||| ||||||||||||| ||||||| ||||    
T  43261880 cgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaaaaatcgattattca 43261805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 175 - 321
Target Start/End: Original strand, 27751860 - 27752005
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||| ||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||  |||||||| |  ||| || ||||     
T  27751860 ttcaatataaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgccttttggggcgc 27751958  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattcatattgaa 321  Q
    | ||||||||||||| || ||||||||||||||| ||||||||||||    
T  27751959 tatttgatttcccgtcttcttgcggtgttcatttgattcatattgaa 27752005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 326
Target Start/End: Original strand, 28235504 - 28235669
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||| |||  ||| |||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||| ||||  |||||  |     
T  28235504 tctttttctttctatttcgatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgtctgt 28235602  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    | ||||||||||||||||||||||| || | || ||||||||||||||| |||| ||||||||||||    
T  28235603 cgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttcattttattcttattgaaagatc 28235669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 163 - 326
Target Start/End: Complemental strand, 3271566 - 3271397
Alignment:
Q  163 ttttctctctcgttcaatctaaataagtgatttttcacatagat-------tttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgt 255  Q
    ||||||||||  |||||||||||||||||||||| ||||||| |       ||| ||||||||||  ||||||| |||||  |||||||||||  ||| |    
T  3271566 ttttctctctgtttcaatctaaataagtgatttt-cacataggtctaatttttttgttttttctttgtgatttcatcatctaagtgtggtggtttgttat 3271468  T
Q  256 tcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    ||| | |||||||| |||||||||||||| |||| ||  |||||||||||||| |||||||||||||||||    
T  3271467 tcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3271397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 330
Target Start/End: Original strand, 7241701 - 7241871
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt-cttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    |||||||||||||  |||||||||||||||||| ||| ||||||||| | |||||||| |||  ||||||| |||||  | ||||||| |  ||||||||    
T  7241701 tctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaattgtggtgatttgttgttcg 7241799  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgatt 330  Q
     | |||||||||||||| |||  ||||| || || ||||||||||||||| |||| |||||| |||||||||    
T  7241800 tcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttcattttattcctattgatagatcgatt 7241871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 396
Target Start/End: Original strand, 781308 - 781545
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||||||| || |||||| | || ||||||||  ||||||| |||||  ||| |||||||  ||||||||     
T  781308 tctttttctctatatttcaatctaaataagtgatttt-cagatagatctagggtttttctttgtgatttcatcatctaagtatggtggtttgttgttcgt 781406  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttgcg---caacgt 356  Q
    | || ||||||||  ||||||||||||||| || ||||||||||||| | |||||| ||| |||||| ||| |||| | ||| |||||| |   ||||||    
T  781407 cgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcattttg-aagatcaattattcaatcaaa-aatttgagcgtcaacgt 781504  T
Q  357 tgcagattcag-agtcatgtgtattccggtcactttaattt 396  Q
    ||||||| | | || ||||  ||||||||||||||||||||    
T  781505 tgcagatccggaagccatggatattccggtcactttaattt 781545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 162 - 396
Target Start/End: Original strand, 42579801 - 42580045
Alignment:
Q  162 tttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt--------cttcatgatttcgtcatccgagtgtggtggtgcgtt 253  Q
    ||||||| |||  |||||||||||||||||||||| ||||||||||| ||||||||        |||  ||||||| |||||  ||||||||| |  |||    
T  42579801 tttttctttctatttcaatctaaataagtgatttt-cacatagatttaggtttttttgttttttctttgtgatttcatcatctaagtgtggtgatttgtt 42579899  T
Q  254 gttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-c 351  Q
    ||||| | ||||||||| ||||||||||||| | || ||  ||| |||||||||| ||||||||| ||||||||||| |||| | ||||| ||  ||| |    
T  42579900 gttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttcattttattcatatttaaagatcgattattcaatcaaagatttgggcgtc 42579999  T
Q  352 aacgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||||||||| | || | ||||  ||||||||||||||||||||    
T  42580000 aacgttgcagatccggaggccatgaatattccggtcactttaattt 42580045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 262 - 396
Target Start/End: Original strand, 4954012 - 4954149
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg-cg-caacgttgc 359  Q
    ||||||||||||||||||  |||||||| || ||||||||||||||| |||| |||||||||||||||| |||| | ||||| || | || |||||||||    
T  4954012 tcttgtgcggcgttgttttctttcccgtcttcttgcggtgttcattttattcctattgaaagatcgattattcaatcaaagatttggacgtcaacgttgc 4954111  T
Q  360 agattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    |||||| || | ||||  ||||||||| ||||||||||    
T  4954112 agattcggaggccatgaatattccggtgactttaattt 4954149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 348
Target Start/End: Complemental strand, 7887099 - 7886911
Alignment:
Q  159 gtctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||||| ||||||  || ||||||||||||||||||| |||||| || |  ||||||||||  ||||||| |||||  |||||||||||  ||||||||    
T  7887099 gtcttttcctctctattttaatctaaataagtgatttt-cacataaatctatgttttttctttttgatttcatcatctaagtgtggtggtttgttgttcg 7887001  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatttg 348  Q
     | |||||| |  | ||||||||||| |||| || ||||||||||  | | ||||||||| ||||||||||| |||| | ||||| ||||    
T  7887000 tcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatattaaaagatcgattattcaatcaaagattttg 7886911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 262 - 325
Target Start/End: Complemental strand, 10332639 - 10332576
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagat 325  Q
    ||||||||||| |||||||||||| ||| ||||||| |||||  ||| ||||||||||||||||    
T  10332639 tcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagat 10332576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 10649653 - 10649715
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattc 313  Q
    |||||||| | ||||||||||||||||||||||| |||| ||  |||||||||||||| ||||    
T  10649653 gttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattc 10649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 31802530 - 31802484
Alignment:
Q  262 tcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcattt 308  Q
    ||||||||||||||||||||||||| ||  |||||||||||||||||    
T  31802530 tcttgtgcggcgttgtttgatttccggtcatgttgcggtgttcattt 31802484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 19983499 - 19983368
Alignment:
Q  178 aatctaaataagtgatttttcacatagattttggttt--tttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgtt 275  Q
    |||||||||| ||||||||  |||||||||| || ||  ||||||  ||||||||||||  |||||||| | || |||||||| |  |||||||||||||    
T  19983499 aatctaaatacgtgattttg-acatagatttagggttattttctttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgtt 19983401  T
Q  276 gtttgatttcccgtattgttgcggtgttcattt 308  Q
    ||| | |||  ||| |||||| |||||||||||    
T  19983400 gttagttttttcgtcttgttgtggtgttcattt 19983368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 22978964 - 22978920
Alignment:
Q  280 gatttcccgtattgttgcggtgttcatttaattcatattgaaaga 324  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||    
T  22978964 gattttccgttttgttgcggtgttcatttgattcatattgaaaga 22978920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 35631836 - 35631771
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtg 241  Q
    ||||||||||||||||||||||| ||||| || |  |||||||||||||| ||| ||| ||||||||    
T  35631836 ttcaatctaaataagtgattttt-acatatatctaagttttttcttcatggttttgtcgtccgagtg 35631771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 35921077 - 35921023
Alignment:
Q  272 cgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||||| ||| ||||||||||||||||||  ||| |||| |||||||    
T  35921077 cgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatc 35921023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 217
Target Start/End: Original strand, 10649372 - 10649428
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggtttttt 217  Q
    ||||||||||| |  |||||||||||||||||| ||||||||||||| | ||||||||    
T  10649372 tctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 335
Target Start/End: Original strand, 11768062 - 11768095
Alignment:
Q  302 ttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||||||||||||||||||||| ||||    
T  11768062 ttcatttaattcatattgaaagatcgattattca 11768095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 28097086 - 28097142
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggtt-ttttcttcatgatttcgt 231  Q
    |||||| ||||||||||| |||||||||| |||| |||| ||||||||||||||||||    
T  28097086 ttcaatataaataagtga-ttttcacataaatttaggttattttcttcatgatttcgt 28097142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 328
Target Start/End: Original strand, 13421909 - 13421996
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    |||||| || || |||||||| | ||||||||||   | ||||||||| |||||||| |  ||||||||||| ||| ||||||||||||||    
T  13421909 agtgtgatgttgtgttgttcgtcgtcttgtgcgg---tatttgatttcgcgtattgtcgttgtgttcatttagttcctattgaaagatcga 13421996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 335
Target Start/End: Original strand, 453871 - 454023
Alignment:
Q  182 taaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttga 281  Q
    ||||||||||||||| |||||| ||||  ||||||||||| ||||||||| ||  || |||| ||||| |||||||| | ||||| ||||||||||||||    
T  453871 taaataagtgatttt-cacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcgtcttgggcggcgttgtttga 453969  T
Q  282 tttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||| | || |||||||||||||||||| | ||||||||||||||||||| ||||    
T  453970 ttttcagtcttgttgcggtgttcatttgactcatattgaaagatcgattattca 454023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 335
Target Start/End: Complemental strand, 201532 - 201359
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcga 259  Q
    ||||||||||| |  |||||||||||||||||||||| ||||||||| | | |||||||||  ||||||| |||||  |||||| ||||  ||||||||     
T  201532 tctttttctctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttcgt 201434  T
Q  260 catcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
      |||||||||||| ||||||||||| ||| || ||| ||||||||||| |||||||||| |||||||||| ||||    
T  201433 agtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattg-aagatcgattattca 201359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 59; Significance: 7e-25; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 212 - 396
Target Start/End: Complemental strand, 83544 - 83360
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaat 311  Q
    |||||||||  ||||||| |||||  |||||||||||  |||||| |   |||||||||||||||||||||||| ||| ||  |||||| ||||||| ||    
T  83544 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttg---tcttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgat 83448  T
Q  312 tcatattgaaagatcgattgttcagttaaagaatttgc--gcaacgttgcagattcaga-gtcatgtgtattccggtcactttaattt 396  Q
    ||||||||||||||||||| |||| |  |||| || ||   |||||||||||||||||| ||||||  | ||||||||||||||||||    
T  83447 tcatattgaaagatcgattattcaatcgaagatttggccgtcaacgttgcagattcagaggtcatggattttccggtcactttaattt 83360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 238 - 335
Target Start/End: Original strand, 6299 - 6396
Alignment:
Q  238 agtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    |||||||||||  |||||||| | |||||| |||| |||||||||||||||| || ||||||||||||||| ||||||||||||||||||||| ||||    
T  6299 agtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatcgattattca 6396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 164 - 396
Target Start/End: Complemental strand, 16479 - 16242
Alignment:
Q  164 tttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcat---gatttcgtcatccgagtgtggtggtgcgttgttcgac 260  Q
    |||||||||  |||||||||||||||||||||| ||||||||||| |||||||| ||| |   |||||| |||||  |||||||||||  |||||| | |    
T  16479 tttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc 16381  T
Q  261 atcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttcagttaaagaatt-tgcg-caacgttg 358  Q
     ||||||||||||||||||||| ||  || ||   |||||||| |||| ||||||||| ||| ||||||| |||| | ||||| ||  ||| ||||||||    
T  16380 gtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatattaaaatatcgattattcaatcaaagatttgggcgtcaacgttg 16281  T
Q  359 cagattcagagtc-atgtgtattccggtcactttaattt 396  Q
    ||||| | ||| | |||  ||||||||||||||||||||    
T  16280 cagatccggaggctatggatattccggtcactttaattt 16242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 178 - 315
Target Start/End: Complemental strand, 20537 - 20402
Alignment:
Q  178 aatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgt 277  Q
    ||||||||||||||||||| || |||||||| | |||||| || | |||||| |||||  |||||||||||  |||||||| | ||||||||| ||||||    
T  20537 aatctaaataagtgatttt-catatagatttggctttttttttta-gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgt 20440  T
Q  278 ttgatttcccgtattgttgcggtgttcatttaattcat 315  Q
    ||||||| |||| || ||||||||||||||| ||||||    
T  20439 ttgattttccgttttcttgcggtgttcatttgattcat 20402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 335
Target Start/End: Original strand, 5314 - 5489
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattt-tggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcg 258  Q
    ||||| |||||||  |||||||||||||||||| |||| ||||| || | || |||||||||  ||||||| ||||   |||||| ||||  ||||||||    
T  5314 tctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcatttaagtgtgatggtttgttgttcg 5412  T
Q  259 acatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcgattgttca 335  Q
     | ||||||||||||||||||| |||||||| || ||| ||||||||||| |||  ||||||||||| |||| ||||    
T  5413 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaaagattgattattca 5489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 322
Target Start/End: Original strand, 6017 - 6088
Alignment:
Q  251 gttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||    
T  6017 gttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaa 6088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 175 - 313
Target Start/End: Complemental strand, 361942 - 361807
Alignment:
Q  175 ttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgt 274  Q
    |||||||||||||||| ||||| |||||||| || |||||||| |   ||||||| ||||   ||| |||||||  |||||||| | |||||||||||||    
T  361942 ttcaatctaaataagtaatttt-cacatagagttaggttttttttg--tgatttcatcatttaagtatggtggtttgttgttcgtcgtcttgtgcggcgt 361846  T
Q  275 tgtttgatttcccgtattgttgcggtgttcatttaattc 313  Q
    |||||||||||| || ||| ||| |||||||||| ||||    
T  361845 tgtttgatttcctgtcttggtgcagtgttcatttgattc 361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 8636 - 8723
Alignment:
Q  160 tctttttctctctcgttcaatctaaataagtgatttttcacatagattttggttttttcttcatgatttcgtcatccgagtgtggtggt 248  Q
    ||||||| |||||  |||||||||||||||||||||| ||||||||| | |||||||||||  ||||||| |||||  |||||||||||    
T  8636 tctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggt 8723  T

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Target: scaffold0311; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 335
Target Start/End: Original strand, 8745 - 8782
Alignment:
Q  298 ggtgttcatttaattcatattgaaagatcgattgttca 335  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  8745 ggtgttcatttgattcatattgaaagatcgattattca 8782  T

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Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 252 - 328
Target Start/End: Complemental strand, 10140 - 10067
Alignment:
Q  252 ttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcga 328  Q
    ||||||| | ||||||||||||||   ||||||| ||| |||| |||||||||||||||||| ||||||||||||||    
T  10140 ttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcga 10067  T

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Target: scaffold0136; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 34827 - 34775
Alignment:
Q  274 ttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    |||||||||||| ||| ||||||| | |||||||| |||||||||||||||||    
T  34827 ttgtttgatttctcgttttgttgcagggttcatttgattcatattgaaagatc 34775  T

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Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 326
Target Start/End: Complemental strand, 92626 - 92523
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||| || ||||||| || || |||| ||  | |||||||||  ||||||||||||| ||| |||||| ||||||| |||  ||||||||||||    
T  92626 tgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaa 92527  T
Q  323 gatc 326  Q
    ||||    
T  92526 gatc 92523  T

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Target: scaffold0127 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 15453 - 15554
Alignment:
Q  223 tgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaa 322  Q
    |||||||||||||  |||| |||| || |||||||| | |||||||||||||  ||||||||| ||| |||| ||||||||  || | ||| ||||||||    
T  15453 tgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaa 15550  T
Q  323 gatc 326  Q
    ||||    
T  15551 gatc 15554  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 327
Target Start/End: Original strand, 93054 - 93170
Alignment:
Q  212 ttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgat-ttcccgtattgttgcggtgttcatttaa 310  Q
    ||||||| ||||||||||||| || |||||  | | || |||||| |   ||||||||||||||||||||| |||  || |||||| ||||||| |||      
T  93054 ttttttcctcatgatttcgtcgtctgagtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttgg 93153  T
Q  311 ttcatattgaaagatcg 327  Q
    |||||||||||||||||    
T  93154 ttcatattgaaagatcg 93170  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 276 - 327
Target Start/End: Original strand, 1356 - 1407
Alignment:
Q  276 gtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatcg 327  Q
    |||||||||| ||| |||||||||||||| |||| ||| |||||||||||||    
T  1356 gtttgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcg 1407  T

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Target: scaffold0372 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 9677 - 9615
Alignment:
Q  264 ttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaattcatattgaaagatc 326  Q
    ||||||||||||||||||| ||  |  |||||| ||| ||||||| |||||||||||||||||    
T  9677 ttgtgcggcgttgtttgatatcttgctttgttgtggtattcatttgattcatattgaaagatc 9615  T

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Target: scaffold0113 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 325
Target Start/End: Complemental strand, 36797 - 36683
Alignment:
Q  211 gttttttcttcatgatttcgtcatccgagtgtggtggtgcgttgttcgacatcttgtgcggcgttgtttgatttcccgtattgttgcggtgttcatttaa 310  Q
    |||||||||||||||||| ||  |  ||||||  || || |||||||| | |||||||||| |||||||||||||   | |||||| |||| | ||||      
T  36797 gttttttcttcatgatttggttgtgtgagtgtcttgttgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttgg 36698  T
Q  311 ttcatattgaaagat 325  Q
    |||||||||||||||    
T  36697 ttcatattgaaagat 36683  T

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