View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1104_low_48 (Length: 366)
Name: NF1104_low_48
Description: NF1104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1104_low_48 |
 | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0038 (2 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 40)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 83 - 316
Target Start/End: Complemental strand, 31285352 - 31285119
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
31285352 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtgtacccctttattagtttccttatcaagaagcaat |
31285253 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31285252 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
31285153 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgttcaacta |
316 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
31285152 |
taaaatcatattcatatctgttcatgttcaacta |
31285119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 84 - 309
Target Start/End: Complemental strand, 26624063 - 26623838
Alignment:
| Q |
84 |
ttatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatt |
183 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||| ||||| |||||||| | || || | | ||||||||||| ||| |
|
|
| T |
26624063 |
ttatagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatt |
26623964 |
T |
|
| Q |
184 |
tcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaat |
283 |
Q |
| |
|
|||||||||||| | || ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| | | |||| |
|
|
| T |
26623963 |
tcacttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaat |
26623864 |
T |
|
| Q |
284 |
aaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
26623863 |
aaaatcatattcatatctgttcatgt |
26623838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 84 - 309
Target Start/End: Complemental strand, 26730040 - 26729815
Alignment:
| Q |
84 |
ttatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatt |
183 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||| ||||| |||||||| | || || | | ||||||||||| ||| |
|
|
| T |
26730040 |
ttatagattgctcttgcaagtgttgatttgcccaagcctccaatcccatacattccaaccatatggaccccatcatcagatccattatcaagaagtgatt |
26729941 |
T |
|
| Q |
184 |
tcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaat |
283 |
Q |
| |
|
|||||||||||| | || ||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| | | |||| |
|
|
| T |
26729940 |
tcacttgttgtagttgagactgtaatccaacagggtatttagcaacatgtaagggcacacgattgatcttgttggagatgtatttgactatcttttcaat |
26729841 |
T |
|
| Q |
284 |
aaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
26729840 |
aaaatcatattcatatctgttcatgt |
26729815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 83 - 314
Target Start/End: Complemental strand, 26803239 - 26803008
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| || |
|
|
| T |
26803239 |
attatagattgctcttgcaagtgctgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgat |
26803140 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||| ||||| |||| | | ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
26803139 |
ttcacttcttgtactcgagagtgcaatccaacagggtaattagcaacatgtaagggctgacgattgatcttgttggagatgtatttgactatctctccaa |
26803040 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgttcaac |
314 |
Q |
| |
|
| || | ||||||||||| ||||||| |||| |
|
|
| T |
26803039 |
tcaacttgtattcatatctattcatgtccaac |
26803008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 28787031 - 28786805
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||||| | |||||||||||||||||| |||| || | || || | | | |||||||||| || |
|
|
| T |
28787031 |
attataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgat |
28786932 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28786931 |
ttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatctccaa |
28786832 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
28786831 |
taaacttgtattcatatctattcatgt |
28786805 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27427001 - 27427227
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| || |
|
|
| T |
27427001 |
attatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgat |
27427100 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| | ||||| |
|
|
| T |
27427101 |
ttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaa |
27427200 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| || ||||||||||| ||||||| |
|
|
| T |
27427201 |
taagctcgtattcatatctattcatgt |
27427227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27717888 - 27718114
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | |||||||||| || |
|
|
| T |
27717888 |
attataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgat |
27717987 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||| |
|
|
| T |
27717988 |
ttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaa |
27718087 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| || ||||||||||| ||||||| |
|
|
| T |
27718088 |
taaactcgtattcatatctattcatgt |
27718114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 301
Target Start/End: Complemental strand, 28793152 - 28792934
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||||| | |||||||||||||||||| |||| || | || || | | | |||||||||| || |
|
|
| T |
28793152 |
attataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgcggactccatcatcagatccttcatcaagaagcgat |
28793053 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
28793052 |
ttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatctccaa |
28792953 |
T |
|
| Q |
283 |
taaaatcatattcatatct |
301 |
Q |
| |
|
|||| | ||||||||||| |
|
|
| T |
28792952 |
taaacttgtattcatatct |
28792934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 83 - 308
Target Start/End: Original strand, 27610509 - 27610734
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | |||||||||| || |
|
|
| T |
27610509 |
attataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgat |
27610608 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||| ||||| | || ||| ||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||| |||||| |
|
|
| T |
27610609 |
ttcacttcttgtacttgagactgcaatccaacagggtaattggcaacatgtaagggttgacgactgatcttgttggagatgtatttgactatctctccag |
27610708 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatg |
308 |
Q |
| |
|
|||| || ||||||||||| |||||| |
|
|
| T |
27610709 |
taaactcgtattcatatctattcatg |
27610734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 301
Target Start/End: Original strand, 27697975 - 27698193
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||| ||||| |||||||| | || || | | |||||||||| || |
|
|
| T |
27697975 |
attatagattgctcttgcaagtgttgattttcccaagcctccaatcccaaaaattccaaccatatggaccccatcatcagatccattatcaagaattgat |
27698074 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
|||||| ||||| | || ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
27698075 |
ttcactctttgtacttgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatctcttcaa |
27698174 |
T |
|
| Q |
283 |
taaaatcatattcatatct |
301 |
Q |
| |
|
|||| | ||||||||||| |
|
|
| T |
27698175 |
taaacttgtattcatatct |
27698193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27705793 - 27706019
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| || ||| ||| ||| ||||| |||||||| | || || | ||| ||||||||| || |
|
|
| T |
27705793 |
attataaattgctcttgcaagtgttgatttacccaagcctccaatgccaaaaattccaaccatatggaccccatcatcaggtccctcatcaagaagtgat |
27705892 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||||||||||||| | ||||| |
|
|
| T |
27705893 |
ttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggatgtcgactgatcttgttggagatgtatttgactatctttccaa |
27705992 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| | ||||||||||| ||||||| |
|
|
| T |
27705993 |
taagcttgtattcatatctattcatgt |
27706019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 84 - 309
Target Start/End: Original strand, 27592411 - 27592636
Alignment:
| Q |
84 |
ttatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatt |
183 |
Q |
| |
|
||||| |||||| | |||||||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| | || || | | | |||||||||| ||| |
|
|
| T |
27592411 |
ttataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgatt |
27592510 |
T |
|
| Q |
184 |
tcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaat |
283 |
Q |
| |
|
|||||||||||| |||| ||| ||||||||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||| | |||||| |
|
|
| T |
27592511 |
tcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatttaagggctgtcgactgatcttgttggagatgtatttgactatctttccaat |
27592610 |
T |
|
| Q |
284 |
aaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|| | ||||||||||| ||||||| |
|
|
| T |
27592611 |
aagcttgtattcatatctattcatgt |
27592636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 27679743 - 27679517
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||| ||||| || ||||||| ||| ||||| |||||||| | || | | ||| |||||||||| || |
|
|
| T |
27679743 |
attatagatttgtcttgcaagtgttgatttccccaaacctccaatgccataaattccaaccatatggaccccatcatcggatccctcatcaagaagcgat |
27679644 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||| ||||||||| ||||||| ||| |||||||||||||||||||||||||||| | ||||| |
|
|
| T |
27679643 |
ttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggctgtcgactgatcttgttggagatgtatttgactatctttccaa |
27679544 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| | ||||||||||| ||||||| |
|
|
| T |
27679543 |
taagcttgtattcatatctattcatgt |
27679517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 309
Target Start/End: Complemental strand, 26647256 - 26647046
Alignment:
| Q |
99 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
198 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| || || ||| ||||||||||||||||||||||||| || || |
|
|
| T |
26647256 |
gcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatc |
26647157 |
T |
|
| Q |
199 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
298 |
Q |
| |
|
| ||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||| || |||||| | |||||||| | |||||||| |
|
|
| T |
26647156 |
gggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcata |
26647057 |
T |
|
| Q |
299 |
tctgttcatgt |
309 |
Q |
| |
|
||| ||||||| |
|
|
| T |
26647056 |
tctattcatgt |
26647046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 26656758 - 26656532
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| | ||||||||||||||||||| |||||| | |||||||||||||||||| | ||| | | |||| | ||||||||||||||||| |
|
|
| T |
26656758 |
attataaattgctttggcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaat |
26656659 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| |||||||||||||| |||||||||| ||| |||||||||||||||| |||||||| ||||||||| | ||| |
|
|
| T |
26656658 |
ttcacttgttgtactcgagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaa |
26656559 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
26656558 |
taaacttgtattcatatctattcatgt |
26656532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 99 - 309
Target Start/End: Complemental strand, 26753224 - 26753014
Alignment:
| Q |
99 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
198 |
Q |
| |
|
|||||||||||||||||||| ||||| | ||||||||||||||||| |||||||||| || || ||| ||||||||||||||||||||||||| || || |
|
|
| T |
26753224 |
gcaagtgttgatttacccaaacctccagtaccataaagtcctaccatatggaccccttcatcagattctttatcaagaagcaatttcacttgttctaatc |
26753125 |
T |
|
| Q |
199 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
298 |
Q |
| |
|
| ||| |||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||| || |||||| | |||||||| | |||||||| |
|
|
| T |
26753124 |
gggactctaatccaacagggtatttggctacatgtaaaatgacacgattgatcttgttggagatgtcttcgactatcttcccaataaacttgtattcata |
26753025 |
T |
|
| Q |
299 |
tctgttcatgt |
309 |
Q |
| |
|
||| ||||||| |
|
|
| T |
26753024 |
tctattcatgt |
26753014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 26762729 - 26762503
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| | ||||||||||||||||||| |||||| | |||||||||||||||||| | ||| | | |||| | ||||||||||||||||| |
|
|
| T |
26762729 |
attataaattgctttggcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgagaacctcatccttagatcccttatcaagaagcaat |
26762630 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| |||||||||||||| |||||||||| ||| |||||||||||||||| |||||||| ||||||||| | ||| |
|
|
| T |
26762629 |
ttcacttgttgtactcgagactctaatccaacagggtatttggcaacatgtaaaaaaacacgattgatcttgtcggagatgtctttgactatattctcaa |
26762530 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
26762529 |
taaacttgtattcatatctattcatgt |
26762503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27604093 - 27604319
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | ||||||||| || |
|
|
| T |
27604093 |
attataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagagat |
27604192 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||| ||| ||||||||||||| ||||||| |||| |||||||||||||||| | ||| ||||| | ||||| |
|
|
| T |
27604193 |
ttcacttgttgtactcgagactgcaatccaataggataattggcaacatgtaagggctgacgactgatcttgttggagatttctttcactatctttccaa |
27604292 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| || ||||||||||| ||||||| |
|
|
| T |
27604293 |
taagctcgtattcatatctattcatgt |
27604319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27677009 - 27677235
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| | |||||||||||||| ||||||||||| |||||||||| ||| ||||| |||||||| | || || | | | |||||||||| || |
|
|
| T |
27677009 |
attataaattgctttcgcaagtgttgattttcccaagcctccaatcccataaattccaaccatatggaccccatgatcagatccttcatcaagaagcgat |
27677108 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
|||| |||||||| |||| ||| ||||||||||||||| ||||||||| |||||| || |||||||||||||||||||||||||||| | ||||| |
|
|
| T |
27677109 |
ttcatttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaagggttgttgactgatcttgttggagatgtatttgactatctttccaa |
27677208 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| | ||||||||||| ||||||| |
|
|
| T |
27677209 |
taagcttgtattcatatctattcatgt |
27677235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 100 - 309
Target Start/End: Complemental strand, 28781877 - 28781668
Alignment:
| Q |
100 |
caagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttcctt-atcaagaagcaatttcacttgttgtattc |
198 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||| ||| || |||| | | ||||| | |||||||| ||||||||||||||| || |
|
|
| T |
28781877 |
caagtgttgatttacccaagcctccagtaccataaagtcctaccatcctgactccattatca-tatccttcaccaagaagcgatttcacttgttgtactc |
28781779 |
T |
|
| Q |
199 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
298 |
Q |
| |
|
| ||| ||||||||||||||||||||||||| |||| || |||| |||||||||||||||||||||||||||| || |||||||| | |||||||| |
|
|
| T |
28781778 |
gggactgtaatccaacagggtaattggcaacatgtaagtgctgacgactgatcttgttggagatgtatttgactatatcgccaataaacttgtattcata |
28781679 |
T |
|
| Q |
299 |
tctgttcatgt |
309 |
Q |
| |
|
||| ||||||| |
|
|
| T |
28781678 |
tctattcatgt |
28781668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 26884863 - 26884637
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||| ||||||| |||| ||||||||||||||||||| |
|
|
| T |
26884863 |
attataaattgcttttgcaagtgttgatttacccaagcctccagtaccataaattcctaccatgtgtaccccttcgttagattccttatcaagaagcaat |
26884764 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
|| | |||||||| ||| ||| |||||||||||||| ||||| |||| ||| ||||||||||| |||| |||||| | || |||||| | || | |
|
|
| T |
26884763 |
tttaattgttgtactcggtactgtaatccaacagggtatttggctacatgtaaaacaacacgattgattttgtcggagatatcttcgactatcttcccga |
26884664 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| || ||||| ||||| ||||||| |
|
|
| T |
26884663 |
taaactcgtattcgtatctattcatgt |
26884637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 26862373 - 26862230
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||| |||| |||||| | |||||||||||||||||||| ||||||| || || |||| |||||||||||||| |
|
|
| T |
26862373 |
attataaattgcttttgcaagtgttgatttccccatgcctccagtaccataaagtcctaccatgtgtaccccttcatcagattccatatcaagaagcaat |
26862274 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggc |
226 |
Q |
| |
|
|||||||||| || ||| |||| |||||||||||||| ||||| |
|
|
| T |
26862273 |
ttcacttgttctactcgggactttaatccaacagggtatttggc |
26862230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 27337484 - 27337630
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||| || || ||||| ||||||||||||| |
|
|
| T |
27337484 |
attataaattgcttttgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaat |
27337583 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaac |
229 |
Q |
| |
|
|| |||||||||| ||| ||| |||||||||||||| |||||||| |
|
|
| T |
27337584 |
tttacttgttgtactcgggactgtaatccaacagggtatttggcaac |
27337630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 27398224 - 27398370
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||| || || ||||| ||||||||||||| |
|
|
| T |
27398224 |
attataaattgcttttgcaagtgttgattttcccaagcctctagtaccataaagtcctaccatgttgaccccttcatcagattcctcatcaagaagcaat |
27398323 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaac |
229 |
Q |
| |
|
|| |||||||||| ||| ||| |||||||||||||| |||||||| |
|
|
| T |
27398324 |
tttacttgttgtactcgggactgtaatccaacagggtatttggcaac |
27398370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 27530690 - 27530916
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| ||||||||||||||||||| | |||||| | |||||||||||||||||||||||| | | || || || | ||||||| || | |
|
|
| T |
27530690 |
attataaattgcttttgcaagtgttgatttacctatgcctccagtaccataaagtcctaccatgtggacctcatcatcagatttttcatcaagatgccct |
27530789 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||| ||||||| ||| ||| ||||||||||| || |||||||||| ||||||| ||||| | ||| ||||||| |||| || |||||| | ||||| |
|
|
| T |
27530790 |
ttcacatgttgtactcgggactgtaatccaacaggatatttggcaacatctaagggctcacgactaatcctgttggaaatgtcttcgactatctttccaa |
27530889 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| || ||||||||||| ||||||| |
|
|
| T |
27530890 |
taaactcgtattcatatctattcatgt |
27530916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 251
Target Start/End: Original strand, 25492709 - 25492876
Alignment:
| Q |
84 |
ttatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatt |
183 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| |||||||| | |||||||||||||||||||||| | | | | || | ||| ||| |||||||||| |
|
|
| T |
25492709 |
ttatagattgattttgcaagtgttgatttacctaagcctccagtaccataaagtcctaccatgtggaactcatcctcagatacctcatctagaagcaatt |
25492808 |
T |
|
| Q |
184 |
tcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatc |
251 |
Q |
| |
|
|||| ||||||| ||| | | |||||||||||||| |||||||||| ||| | |||||||||||| |
|
|
| T |
25492809 |
tcacgtgttgtactcgggattgtaatccaacagggtatttggcaacatgtaatgaaacacgattgatc |
25492876 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 83 - 274
Target Start/End: Complemental strand, 25580515 - 25580324
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| | |||| ||||||||||||||||||||| |||||| | |||||||||||||||||||||||| | | | || || | |||||||||||| |
|
|
| T |
25580515 |
attataaactgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgtggaccacatcctcagagcccatgtcaagaagcaat |
25580416 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
|||||||||| |||||| ||| |||||||||||||| ||||| || | ||| ||| ||||||| ||||||||||||| || |||||| |
|
|
| T |
25580415 |
ttcacttgttctattcgggactgtaatccaacagggtatttggctacgtttaaaaaaacatgattgatattgttggagatgtcttcgactat |
25580324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 91 - 258
Target Start/End: Complemental strand, 26824604 - 26824437
Alignment:
| Q |
91 |
ttgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttg |
190 |
Q |
| |
|
||||| ||||||||||||||||||| || ||||| || || |||||||||||||| |||||| | | || || ||| ||||||||||| |||||||||| |
|
|
| T |
26824604 |
ttgcttttgcaagtgttgatttacctaaacctccaataccgtaaagtcctaccatatggaccacatcatcagattcgttatcaagaagagatttcacttg |
26824505 |
T |
|
| Q |
191 |
ttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttgg |
258 |
Q |
| |
|
||||| ||| ||| |||||||| ||||| |||||||||| ||| ||||||||||||| ||||| |
|
|
| T |
26824504 |
ttgtactcgggactgtaatccaaccgggtatttggcaacatgtaaactaacacgattgatctggttgg |
26824437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 309
Target Start/End: Complemental strand, 25539327 - 25539110
Alignment:
| Q |
92 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
191 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | |||||||||||||||||| ||||| | | | || || ||||||||||||||||||||| |
|
|
| T |
25539327 |
tgcttttgcaagtgttgatttacccatgcctccagtaccataaagtcctaccatgcggacctcatcctcagagcccaagtcaagaagcaatttcacttgt |
25539228 |
T |
|
| Q |
192 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcat |
291 |
Q |
| |
|
| |||| | ||| |||||||||||||| ||||| |||||||| ||| ||||||| ||||||||||||| || |||||| | ||||||| | | |
|
|
| T |
25539227 |
tctattggggactgtaatccaacagggtatttggccacatataaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaataaacttgt |
25539128 |
T |
|
| Q |
292 |
attcatatctgttcatgt |
309 |
Q |
| |
|
|||||||||| ||||||| |
|
|
| T |
25539127 |
attcatatctattcatgt |
25539110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 27215238 - 27215131
Alignment:
| Q |
90 |
attgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcactt |
189 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||||| ||| |||| | |||| |||||||||||||| |||| |
|
|
| T |
27215238 |
attgcttttgcaagtgttgatttacccatgcctccagctccatgaagtcctaccatgtggacctcttccttagatcccttgtcaagaagcaattttactt |
27215139 |
T |
|
| Q |
190 |
gttgtatt |
197 |
Q |
| |
|
|||||||| |
|
|
| T |
27215138 |
gttgtatt |
27215131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 26143661 - 26143435
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| | |||| ||||||||||||||||||||| |||||| | ||| |||||||||||||| ||||| | | | || || | |||||||||||| |
|
|
| T |
26143661 |
attataaactgcttttgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaat |
26143562 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||| || |||||| ||| |||||||||||||| ||||| |||| ||| ||| ||||||| ||||||||||||| || |||||| | ||| |
|
|
| T |
26143561 |
ttcacttcttctattcgggactgtaatccaacagggtatttggctacatttaaaaaaacatgattgatattgttggagatgtcttcgactatcttctcaa |
26143462 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
26143461 |
taaacttgtattcatatctattcatgt |
26143435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 263
Target Start/End: Complemental strand, 26056706 - 26056535
Alignment:
| Q |
92 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
191 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| ||| |||||||||| ||||| | || | || || | ||||||||||||||||||||| |
|
|
| T |
26056706 |
tgcttttgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgt |
26056607 |
T |
|
| Q |
192 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatg |
263 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| ||| |||||||||||||||||||| |
|
|
| T |
26056606 |
tctattcgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggagatg |
26056535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 263
Target Start/End: Complemental strand, 26076676 - 26076505
Alignment:
| Q |
92 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
191 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| ||| |||||||||| ||||| | || | || || | ||||||||||||||||||||| |
|
|
| T |
26076676 |
tgcttttgcaagtgttgatttacccatgcctccggtaccaaaaattcctaccatgcggacctcattctcagagcccatgtcaagaagcaatttcacttgt |
26076577 |
T |
|
| Q |
192 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatg |
263 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| ||| |||||||||||||||||||| |
|
|
| T |
26076576 |
tctattcgggactgcaatccaacagggtatttggctacgtttaaaaaaacatgattgatcttgttggagatg |
26076505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 274
Target Start/End: Complemental strand, 25483843 - 25483661
Alignment:
| Q |
92 |
tgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgt |
191 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||| | ||| |||||||||||||| ||||| | | | || || | ||||||||||||||||||||| |
|
|
| T |
25483843 |
tgcttttgcaagtgttgatttacccatgcctccagtaccaaaaagtcctaccatgcggacctcatcctcagagcccatgtcaagaagcaatttcacttgt |
25483744 |
T |
|
| Q |
192 |
tgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
| |||||| ||| |||||||||||||| ||||| || | ||| || ||||||| |||||||||||||||| |||||| |
|
|
| T |
25483743 |
tctattcgggactgtaatccaacagggtatttggctacgtttaaaaaatcatgattgatattgttggagatgtattggactat |
25483661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 300
Target Start/End: Original strand, 28297256 - 28297346
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc |
300 |
Q |
| |
|
||||| ||||||| |||||||||||| || ||||||||||||||| |||| | |||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
28297256 |
ccaacggggtaatcggcaacatataaaggaacacgattgatcttgctggatacgtatttgactatcttctcaataaactcatattcatatc |
28297346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 300
Target Start/End: Complemental strand, 28514817 - 28514727
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc |
300 |
Q |
| |
|
||||| ||||||| |||||||||||| || ||||||||||||||| |||| | |||||||||||| | ||||||| ||||||||||||| |
|
|
| T |
28514817 |
ccaacggggtaatcggcaacatataaaggaacacgattgatcttgctggatacgtatttgactatcttctcaataaactcatattcatatc |
28514727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 300
Target Start/End: Complemental strand, 28181775 - 28181693
Alignment:
| Q |
218 |
gtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcatatc |
300 |
Q |
| |
|
||||| |||||||||||| || |||| ||||||||| ||||| | |||||||||||| | | | ||||| ||||||||||||| |
|
|
| T |
28181775 |
gtaatcggcaacatataaaggaacacaattgatctttttggaaacgtatttgactatcttttcgataaactcatattcatatc |
28181693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 274
Target Start/End: Complemental strand, 25511640 - 25511540
Alignment:
| Q |
174 |
agaagcaatttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgacta |
273 |
Q |
| |
|
||||||||||||||||||| |||||| ||| |||||||||||||| ||||| || | || ||| ||||||||||||||||||||| || ||||| |
|
|
| T |
25511640 |
agaagcaatttcacttgttctattcgggactgcaatccaacagggtatttggctacgttcaaaaaaacatgattgatcttgttggagatgtcttcgacta |
25511541 |
T |
|
| Q |
274 |
t |
274 |
Q |
| |
|
| |
|
|
| T |
25511540 |
t |
25511540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28227618 - 28227554
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
||||||||||||| |||||||| ||| || ||| ||||||||||||| || || ||||||||||| |
|
|
| T |
28227618 |
ccaacagggtaatcggcaacatgtaaaggaacatgattgatcttgttagatatatatttgactat |
28227554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28235231 - 28235167
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
||||||||||||| |||||||||||| || ||| ||||||||||||| || | ||||||||||| |
|
|
| T |
28235231 |
ccaacagggtaatcggcaacatataaaggaacatgattgatcttgtttgatacatatttgactat |
28235167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 267729 - 267955
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||| ||||| |||||||| | || || | | ||||||||||||||| |
|
|
| T |
267729 |
attatagattgctcttgcaagggttgatttacccaagcctccaatcccataaattccaaccatatggaccccatcatcagatccattatcaagaagcaat |
267828 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| | || || ||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
267829 |
ttcacttgttgtacttgagaccataatccaacagggtaattggcaacatgtaagggctcacgactgatcttgttggagatgtatttgactatctctccaa |
267928 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
267929 |
taaacttgtattcatatctattcatgt |
267955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 83 - 270
Target Start/End: Original strand, 28127064 - 28127251
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||| | | || | | ||||||| |||||||| |
|
|
| T |
28127064 |
attataaattgcttttgcaagtgttgatttacccaagcctccaataccataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaaa |
28127163 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttga |
270 |
Q |
| |
|
||||||||||||| | | || ||||||||||| || |||||||||| |||| |||||||||||| ||| ||| |||| ||||| |
|
|
| T |
28127164 |
ttcacttgttgtacttggtcctgtaatccaacaggatatttggcaacatgtaagaaaacacgattgatcctgtcggatatgtctttga |
28127251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 260
Target Start/End: Original strand, 28163764 - 28163941
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | | || | | ||||||| ||||||||| |
|
|
| T |
28163764 |
attataaattgcttttgcaagtgttgatttacccaagcctccagtatcataaagtcctaccatgtggacctcatcatcatatcccttatcgagaagcaat |
28163863 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggag |
260 |
Q |
| |
|
||||||||||||| | || | | ||||||||||| || || ||||||| ||| |||||||||||| ||| |||| |
|
|
| T |
28163864 |
ttcacttgttgtacttgagattgtaatccaacaggatattttgcaacatgtaaaaaaacacgattgatcctgtcggag |
28163941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 8280 - 8054
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||| || | || || | | | |||||||||| || |
|
|
| T |
8280 |
attataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgat |
8181 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||| ||||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| || |||| |
|
|
| T |
8180 |
ttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatcgccaa |
8081 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
8080 |
taaacttgtattcatatctattcatgt |
8054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 2928 - 3154
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||| || | || || | | |||||||||| || |
|
|
| T |
2928 |
attataaattgcttttgcaagtgttgatttacccaatcctccagtaccataaagtcctaccatgtggactccatcatcagatctttcatcaagaagcgat |
3027 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| |||| | ||||||||||||||||||||||| |||||| |||| || ||||||||||||||||||||||||| ||||||| |
|
|
| T |
3028 |
ttcacttgttgtactcgagacttcattccaacagggtaattggcaacatgtaagggttgacgactggtcttgttggagatgtatttgactatctctccaa |
3127 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| || ||||||||||| ||||||| |
|
|
| T |
3128 |
taaactcgtattcatatctattcatgt |
3154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 13064 - 13290
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||||| || | || || | | | |||||||||| || |
|
|
| T |
13064 |
attataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtggactccatcatcagatccttcatcaagaagcgat |
13163 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||| ||||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| || |||| |
|
|
| T |
13164 |
ttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagatgtatttgactatatcgccaa |
13263 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
13264 |
taaacttgtattcatatctattcatgt |
13290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 83 - 301
Target Start/End: Original strand, 4101 - 4319
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| || ||||||||||||||||||||||||| | ||||||||||||||||||||| | || | || || | | | |||||||||| || |
|
|
| T |
4101 |
attataaattgcttttccaagtgttgatttacccaagcctccagtaccataaagtcctaccatgtgggctccatgatcagatccttcatcaagaagcgat |
4200 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||| ||||||| |||| ||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||| |||||||| ||||||| |
|
|
| T |
4201 |
ttcacatgttgtactcgagactgtaatccaacagggtaattggcaacatgtaagggctgatgactgatcttgttggagatgttcttgactatctctccaa |
4300 |
T |
|
| Q |
283 |
taaaatcatattcatatct |
301 |
Q |
| |
|
|||| | ||||||||||| |
|
|
| T |
4301 |
taaacttgtattcatatct |
4319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 60362 - 60136
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| || |
|
|
| T |
60362 |
attatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgat |
60263 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| | ||||| |
|
|
| T |
60262 |
ttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaa |
60163 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| || ||||||||||| ||||||| |
|
|
| T |
60162 |
taagctcgtattcatatctattcatgt |
60136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 107; Significance: 1e-53; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 83 - 309
Target Start/End: Complemental strand, 18074554 - 18074328
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||| ||||| |||||||| | || || | ||| |||||||||| || |
|
|
| T |
18074554 |
attatagattgctcttgcaagtgttgatttacctgagcctccaatcccataaattccaaccatatggaccccatcatcaggtccctcatcaagaagcgat |
18074455 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||||| | ||||| |
|
|
| T |
18074454 |
ttcacttgttgtactcgagactgcaatccaacagggtaagtggcaacatgtaaggactgtcgactgatcttgttggagatgtatttgactatctttccaa |
18074355 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
||| || ||||||||||| ||||||| |
|
|
| T |
18074354 |
taagctcgtattcatatctattcatgt |
18074328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 18698785 - 18699011
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| | ||||||||||||||||||| |||||| || ||||||||||||| |||| |||| || | || || | | |||||||||||| | |
|
|
| T |
18698785 |
attataaattgctttcgcaagtgttgatttacccatgcctccaatgccataaagtcctaacatgcggactccatcatcagatcctttatcaagaagcgct |
18698884 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
18698885 |
ttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgacgactgatcttgttggagacgtatttgactatatctccaa |
18698984 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
18698985 |
taaacttgtattcatatctattcatgt |
18699011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 18678945 - 18679171
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| |||||| ||||||||||| ||||||||| |||||| || |||||||||||||||||| |||| || | || || | | |||||||||| || |
|
|
| T |
18678945 |
attataaattgcttttgcaagtgttaatttacccatgcctccaatgccataaagtcctaccatgcggactccatcataagatcattcatcaagaagcgat |
18679044 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||| ||| |||||||||| |||| |||||||||||| ||||||| |
|
|
| T |
18679045 |
ttcacttgttgtactcgagactgcaatccaacagggtaattggcaacatgtaagggctgccgactgatcttgttagagacgtatttgactatctctccaa |
18679144 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
18679145 |
taaacttgtattcatatctattcatgt |
18679171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 18723470 - 18723696
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
|||||| ||| || |||||||||||||||| |||| |||||| || ||||||||||||| |||| |||| || ||||| | | |||||||||||| || |
|
|
| T |
18723470 |
attataaattccttttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccattagatcctttatcaagaagcgat |
18723569 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
||||||||||||| |||| ||| || |||||||||||| ||||||||| ||||||| |||| ||||||||||| || ||||||||||| | ||||| |
|
|
| T |
18723570 |
ttcacttgttgtactcgagactgcaacccaacagggtaagtggcaacatgtaagggctgacgactgatcttgttgttgacatatttgactatctttccaa |
18723669 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
18723670 |
taaacttgtattcatatctattcatgt |
18723696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 309
Target Start/End: Original strand, 18654876 - 18655088
Alignment:
| Q |
97 |
ttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtat |
196 |
Q |
| |
|
|||||||||||||||| |||| |||||| || ||||||||||||| |||| |||| || || || | | |||||||||||| ||||||||||||||| |
|
|
| T |
18654876 |
ttgcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccatcagatcctttatcaagaagcgatttcacttgttgtac |
18654975 |
T |
|
| Q |
197 |
tcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattca |
296 |
Q |
| |
|
|||| ||| || |||||||||||| ||||| ||| ||||||| |||| ||||||||||||||| ||||||||||| | ||||||||| | |||||| |
|
|
| T |
18654976 |
tcgagactgcaacccaacagggtaactggcagcatgtaagggctgacgactgatcttgttggagacatatttgactatctttccaataaacttgtattca |
18655075 |
T |
|
| Q |
297 |
tatctgttcatgt |
309 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
18655076 |
tatctattcatgt |
18655088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 99 - 309
Target Start/End: Original strand, 18730905 - 18731115
Alignment:
| Q |
99 |
gcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaatttcacttgttgtattc |
198 |
Q |
| |
|
|||||||||||||| |||| |||||| || ||||||||||||| |||| |||| || || || | | |||||||||||| ||||||||||||||| || |
|
|
| T |
18730905 |
gcaagtgttgattttcccatgcctccaataccataaagtcctatcatgcggactccaccataagatcctttatcaagaagcgatttcacttgttgtactc |
18731004 |
T |
|
| Q |
199 |
gaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaataaaatcatattcata |
298 |
Q |
| |
|
|| ||| || |||||||||||| ||||||||| ||||||| |||| ||||||||||||||| ||||||||||| | | ||||||| | |||||||| |
|
|
| T |
18731005 |
gagactgcaacccaacagggtaaatggcaacatgtaagggctgacgactgatcttgttggagacatatttgactatcttttcaataaacttgtattcata |
18731104 |
T |
|
| Q |
299 |
tctgttcatgt |
309 |
Q |
| |
|
||| ||||||| |
|
|
| T |
18731105 |
tctattcatgt |
18731115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 83 - 309
Target Start/End: Original strand, 29273227 - 29273453
Alignment:
| Q |
83 |
attatagattgctcttgcaagtgttgatttacccaagcctcctatcccataaagtcctaccatgtggacccctttattagtttccttatcaagaagcaat |
182 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| || |||||||||| ||| ||||| |||| ||| | || || | | |||||||||||| || |
|
|
| T |
29273227 |
attatagattgctcttgcaagggttgatttacccaagccaccaatcccataaattccaaccatatggatcccatcatcagatccattatcaagaagcgat |
29273326 |
T |
|
| Q |
183 |
ttcacttgttgtattcgaaacttaaatccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactatgtctccaa |
282 |
Q |
| |
|
|| |||||||||| | || ||| |||||||||||||| |||||||||| ||||||||| || |||||||||||||||||||||||||||| ||||| | |
|
|
| T |
29273327 |
ttgacttgttgtacttgagactgtaatccaacagggtatttggcaacatgtaagggcacgcggctgatcttgttggagatgtatttgactatctctccga |
29273426 |
T |
|
| Q |
283 |
taaaatcatattcatatctgttcatgt |
309 |
Q |
| |
|
|||| | ||||||||||| ||||||| |
|
|
| T |
29273427 |
taaacttgtattcatatctattcatgt |
29273453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0038
Description:
Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28116 - 28052
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
||||||||||||| |||||||| ||| || ||| ||||||||||||| || || ||||||||||| |
|
|
| T |
28116 |
ccaacagggtaatcggcaacatgtaaaggaacatgattgatcttgttagatatatatttgactat |
28052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0038; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 35393 - 35329
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
||||||||||||| |||||||||||| || ||| ||||||||||||| || | ||||||||||| |
|
|
| T |
35393 |
ccaacagggtaatcggcaacatataaaggaacatgattgatcttgtttgatacatatttgactat |
35329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 57810 - 57874
Alignment:
| Q |
210 |
ccaacagggtaattggcaacatataagggcacacgattgatcttgttggagatgtatttgactat |
274 |
Q |
| |
|
||||||||||||| |||||||||||| || ||| ||||||||||||| || | ||||||||||| |
|
|
| T |
57810 |
ccaacagggtaatcggcaacatataaaggaacatgattgatcttgttagatacatatttgactat |
57874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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