View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1104_low_89 (Length: 264)
Name: NF1104_low_89
Description: NF1104
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1104_low_89 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 34 - 243
Target Start/End: Complemental strand, 11062415 - 11062206
Alignment:
| Q |
34 |
aaaggattacttgtggctcaagttatgagactcctctattaatcaaatagtacattctcaaaagataaggaatattcttatgcttaatataaggatgagt |
133 |
Q |
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| T |
11062415 |
aaaggattacttgtggctcaagttatgagactcctctattaatcaaatagtacattctcaaaagataaggaatattcttatgcttaatataaggatgagt |
11062316 |
T |
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| Q |
134 |
ggggccactgaaggattactttgtagctcaaccctgattccataaccttaggagtagttactaagtgagtagttctcatgcaaaaaactcattgttgtaa |
233 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11062315 |
ggggccactgaaggattactttgtagctcaaccctgattccataaccttaggagtagttactaagtgagtagttctcatgcaaaaaactcattgttgtaa |
11062216 |
T |
|
| Q |
234 |
tcttcatctc |
243 |
Q |
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||||| |||| |
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| T |
11062215 |
tcttcttctc |
11062206 |
T |
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