View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11050_low_19 (Length: 254)
Name: NF11050_low_19
Description: NF11050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11050_low_19 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 254
Target Start/End: Complemental strand, 565252 - 565015
Alignment:
| Q |
17 |
aaaattgacatattaattaagagtcataagtatgtttaattagtaaaggcatgcaagaagaagaaactctcataggtaaattttcttttaatagttggag |
116 |
Q |
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| T |
565252 |
aaaattgacatattaattaagagtcatgagtatgtttaattagtaaaggcatgcaagaagaagaaactctcataggtaaattttcttttaatagctggag |
565153 |
T |
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| Q |
117 |
tagtatcttctctatcaaagattacaataataagagaaagacaaagaggacaaaattcttgaaaagatcaagagtgaatcatggatccaattaaggattc |
216 |
Q |
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| T |
565152 |
tagtatcttctctatcaaagattacaataataagagaaagacaaagaggacaaaattcttgaaaagatcaagagtgaatcgtggatccaattaaggattc |
565053 |
T |
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| Q |
217 |
ttaaatcgctcacaacaaaaattaatggtattgtatat |
254 |
Q |
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|||||||||||||||||| ||||||||||||||||||| |
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| T |
565052 |
ttaaatcgctcacaacaagaattaatggtattgtatat |
565015 |
T |
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