View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11051_low_3 (Length: 321)
Name: NF11051_low_3
Description: NF11051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11051_low_3 |
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Alignment Details
Target: chr2 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 19 - 303
Target Start/End: Original strand, 14212780 - 14213064
Alignment:
| Q |
19 |
gtttagtccctactttattcctcaaactattgaacttcaaaacacagaaagttaatttctctcattgattaatcttacatataatttgctgaattattgc |
118 |
Q |
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| T |
14212780 |
gtttagtccctactttattcctcaaactattgaacttcaaaacacagaaagttaatttctctcattgattaatcttacatataatttgctgaattattgc |
14212879 |
T |
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| Q |
119 |
tgcaataactgctccaccatggaatctctccataaagcatgacctgataatacaccaaacactccttatatctccttgccttctccttaacaattacttc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14212880 |
tgcaataactgctccaccatggaatctctccataaagcatgacctgataatacaccaaacactccttatatctccttgccttctccttaacaattacttc |
14212979 |
T |
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| Q |
219 |
cttgatttcttcctcagaattcaaagaactaacaaattccaaacttctattttcatgcttcttgaaaagactttcacaaagttga |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14212980 |
attgatttcttcctcagaattcaaagaactaacaaattccaaacttctattttcatgcttcttgaaaagactttcacaaagttga |
14213064 |
T |
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