View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11052_high_15 (Length: 277)
Name: NF11052_high_15
Description: NF11052
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11052_high_15 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 47426667 - 47426934
Alignment:
| Q |
1 |
aattctatagacttgtttctctgttctgttccttgtttaggtctttgtcttggttcactaatagaccttgtttttgccctagaagattctgtcttgttca |
100 |
Q |
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| T |
47426667 |
aattctatagacttgtttctctgttctgttccttgtttaggtctttgtcttggttcactaatagaccttgtttttgccctagaagattctgtcttgttca |
47426766 |
T |
|
| Q |
101 |
tgtaacttggtgatgaccatgattttctaggaggcacaataatgtgacgctgagatgttgataaggttgttgggtccatatattcaatcatgtcactgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47426767 |
tgtaacttggtgatgaccatgattttctaggaggcacaataatgtgacgctgagatgttgataaggttgttgggtccatatattcaatcatgtcactgta |
47426866 |
T |
|
| Q |
201 |
gtacttttctgggctgtttggtgctgtgagaattgttctaggattattattcatgtgattcttcttct |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
47426867 |
gtacttttctgggctgtttggtgctgtgagaattgttctaggattattattcatgtgattctccttct |
47426934 |
T |
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