View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11053_low_4 (Length: 276)

Name: NF11053_low_4
Description: NF11053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11053_low_4
NF11053_low_4
[»] chr8 (39 HSPs)
chr8 (18-262)||(29382400-29382644)
chr8 (195-260)||(5850934-5850999)
chr8 (195-260)||(14528142-14528207)
chr8 (195-262)||(24114321-24114388)
chr8 (195-260)||(17976612-17976677)
chr8 (207-260)||(30783782-30783835)
chr8 (194-246)||(30235369-30235421)
chr8 (198-258)||(31288354-31288413)
chr8 (195-258)||(19786724-19786787)
chr8 (195-258)||(30806540-30806603)
chr8 (204-258)||(17101936-17101990)
chr8 (196-262)||(24269592-24269657)
chr8 (199-261)||(24904630-24904692)
chr8 (198-256)||(26008019-26008077)
chr8 (196-258)||(34497109-34497171)
chr8 (195-260)||(13315033-13315097)
chr8 (195-260)||(24110696-24110761)
chr8 (196-260)||(5052962-5053026)
chr8 (197-260)||(15238794-15238857)
chr8 (201-260)||(24723482-24723540)
chr8 (195-258)||(28276801-28276863)
chr8 (198-260)||(14075590-14075652)
chr8 (207-260)||(2637603-2637656)
chr8 (195-256)||(6884951-6885011)
chr8 (195-260)||(30122196-30122260)
chr8 (197-257)||(14628371-14628431)
chr8 (203-255)||(25226137-25226189)
chr8 (208-260)||(44011065-44011116)
chr8 (197-236)||(13697857-13697896)
chr8 (201-260)||(17509246-17509304)
chr8 (198-260)||(24119810-24119871)
chr8 (195-260)||(25182469-25182534)
chr8 (204-256)||(18448587-18448639)
chr8 (196-260)||(24644832-24644895)
chr8 (201-256)||(17969413-17969468)
chr8 (203-258)||(26615285-26615339)
chr8 (198-260)||(14006091-14006153)
chr8 (220-262)||(21314641-21314683)
chr8 (212-256)||(27659455-27659499)
[»] scaffold0005 (1 HSPs)
scaffold0005 (196-262)||(168337-168403)
[»] chr4 (55 HSPs)
chr4 (196-262)||(14648889-14648955)
chr4 (195-260)||(17671995-17672060)
chr4 (196-260)||(13692710-13692774)
chr4 (195-258)||(17951339-17951402)
chr4 (195-258)||(17955191-17955254)
chr4 (202-260)||(13908854-13908912)
chr4 (195-260)||(19562219-19562284)
chr4 (195-262)||(11490525-11490592)
chr4 (195-249)||(9737561-9737615)
chr4 (195-260)||(12578307-12578372)
chr4 (197-258)||(13128917-13128978)
chr4 (203-260)||(19492741-19492798)
chr4 (202-258)||(17709757-17709813)
chr4 (197-256)||(5679200-5679259)
chr4 (199-258)||(22176005-22176064)
chr4 (194-260)||(11700610-11700676)
chr4 (194-256)||(15047120-15047182)
chr4 (194-256)||(15107242-15107304)
chr4 (195-241)||(20829798-20829844)
chr4 (195-260)||(13992917-13992982)
chr4 (195-256)||(19882633-19882694)
chr4 (199-260)||(19929716-19929777)
chr4 (195-260)||(21323916-21323981)
chr4 (195-260)||(25121267-25121331)
chr4 (204-260)||(7582299-7582355)
chr4 (195-250)||(12318426-12318481)
chr4 (201-260)||(17216816-17216875)
chr4 (195-257)||(9052667-9052728)
chr4 (202-260)||(20315000-20315058)
chr4 (196-249)||(22357587-22357640)
chr4 (207-260)||(22526369-22526422)
chr4 (204-260)||(11521232-11521288)
chr4 (196-252)||(19092289-19092345)
chr4 (195-243)||(40227770-40227817)
chr4 (203-262)||(15164768-15164827)
chr4 (194-260)||(12839821-12839887)
chr4 (198-260)||(19900576-19900637)
chr4 (220-260)||(24639495-24639535)
chr4 (202-241)||(13587231-13587270)
chr4 (204-259)||(19374855-19374909)
chr4 (203-258)||(26115947-26116001)
chr4 (198-244)||(1833650-1833696)
chr4 (197-243)||(11933414-11933460)
chr4 (195-260)||(3774818-3774882)
chr4 (204-261)||(11093966-11094023)
chr4 (198-234)||(10107007-10107043)
chr4 (208-260)||(43941828-43941880)
chr4 (225-256)||(12761272-12761303)
chr4 (198-237)||(15050146-15050185)
chr4 (198-237)||(15104239-15104278)
chr4 (199-262)||(25643460-25643522)
chr4 (188-258)||(17337178-17337247)
chr4 (201-258)||(16730442-16730499)
chr4 (204-256)||(19636631-19636682)
chr4 (198-258)||(22218644-22218703)
[»] chr6 (48 HSPs)
chr6 (195-260)||(9726015-9726080)
chr6 (195-260)||(21907425-21907490)
chr6 (195-260)||(12183372-12183437)
chr6 (195-260)||(17729145-17729210)
chr6 (195-260)||(21672476-21672541)
chr6 (195-260)||(8241270-8241335)
chr6 (195-260)||(21679892-21679957)
chr6 (195-260)||(25927344-25927409)
chr6 (195-262)||(23143715-23143782)
chr6 (195-256)||(7543005-7543066)
chr6 (203-260)||(9516786-9516843)
chr6 (195-260)||(11176943-11177008)
chr6 (197-254)||(14079491-14079548)
chr6 (195-260)||(27737730-27737795)
chr6 (198-253)||(21932100-21932155)
chr6 (207-258)||(23645810-23645861)
chr6 (197-251)||(5624635-5624689)
chr6 (198-260)||(28589471-28589533)
chr6 (195-256)||(15466363-15466423)
chr6 (203-256)||(20005924-20005977)
chr6 (195-260)||(22567833-22567898)
chr6 (195-259)||(18075430-18075494)
chr6 (195-255)||(20145106-20145166)
chr6 (195-255)||(22187673-22187733)
chr6 (189-260)||(4339722-4339793)
chr6 (197-250)||(2586716-2586769)
chr6 (195-260)||(28933701-28933766)
chr6 (195-255)||(8039178-8039237)
chr6 (207-255)||(17299877-17299925)
chr6 (196-252)||(19244579-19244635)
chr6 (204-256)||(23844510-23844562)
chr6 (204-256)||(27124537-27124589)
chr6 (195-258)||(21688838-21688901)
chr6 (207-260)||(22566203-22566256)
chr6 (199-243)||(20002440-20002484)
chr6 (218-262)||(22410366-22410410)
chr6 (201-260)||(17827133-17827192)
chr6 (198-260)||(20722218-20722278)
chr6 (209-260)||(34478532-34478582)
chr6 (198-256)||(28586075-28586133)
chr6 (201-262)||(17382144-17382205)
chr6 (197-262)||(24251511-24251576)
chr6 (204-240)||(34092327-34092363)
chr6 (198-236)||(9899024-9899062)
chr6 (195-233)||(17883852-17883890)
chr6 (217-258)||(23232026-23232067)
chr6 (203-255)||(25781796-25781848)
chr6 (204-244)||(26587622-26587662)
[»] chr3 (50 HSPs)
chr3 (195-260)||(21301911-21301976)
chr3 (196-260)||(10917912-10917976)
chr3 (195-260)||(12805931-12805996)
chr3 (196-260)||(21325334-21325398)
chr3 (189-260)||(18458465-18458536)
chr3 (198-260)||(12759383-12759445)
chr3 (195-260)||(6289896-6289961)
chr3 (197-258)||(10744897-10744958)
chr3 (195-260)||(16245770-16245835)
chr3 (203-260)||(22349410-22349467)
chr3 (196-260)||(821555-821619)
chr3 (196-260)||(2167658-2167721)
chr3 (202-260)||(19908307-19908365)
chr3 (197-262)||(3116458-3116522)
chr3 (201-262)||(4650231-4650291)
chr3 (195-260)||(12411144-12411209)
chr3 (195-256)||(41508360-41508421)
chr3 (196-260)||(21825910-21825973)
chr3 (201-260)||(8770019-8770077)
chr3 (205-259)||(10923150-10923204)
chr3 (197-263)||(18736710-18736775)
chr3 (195-256)||(20429703-20429764)
chr3 (195-260)||(21303395-21303460)
chr3 (197-261)||(11518001-11518065)
chr3 (194-258)||(13908269-13908332)
chr3 (201-260)||(8765117-8765175)
chr3 (195-262)||(31286054-31286120)
chr3 (197-243)||(5508331-5508377)
chr3 (196-262)||(8319034-8319099)
chr3 (198-260)||(21083307-21083368)
chr3 (198-260)||(28728940-28729002)
chr3 (203-259)||(11533017-11533073)
chr3 (204-260)||(27542956-27543011)
chr3 (196-259)||(8143609-8143671)
chr3 (195-242)||(19171893-19171940)
chr3 (195-229)||(22245343-22245377)
chr3 (195-260)||(7147981-7148045)
chr3 (219-260)||(8557170-8557211)
chr3 (202-251)||(51119293-51119341)
chr3 (201-261)||(932742-932801)
chr3 (204-260)||(17438472-17438527)
chr3 (198-237)||(12752203-12752242)
chr3 (185-239)||(7478392-7478446)
chr3 (224-262)||(8889191-8889229)
chr3 (202-260)||(19706837-19706894)
chr3 (198-260)||(20339805-20339866)
chr3 (198-260)||(21019637-21019698)
chr3 (198-260)||(25756671-25756733)
chr3 (202-259)||(21074580-21074636)
chr3 (202-258)||(23056214-23056269)
[»] chr7 (85 HSPs)
chr7 (194-262)||(10587063-10587131)
chr7 (195-260)||(7318266-7318331)
chr7 (187-260)||(10584527-10584600)
chr7 (194-257)||(15869587-15869650)
chr7 (197-260)||(23099993-23100056)
chr7 (198-260)||(10937598-10937660)
chr7 (195-260)||(9864367-9864432)
chr7 (201-260)||(8054099-8054158)
chr7 (195-261)||(5530014-5530080)
chr7 (195-260)||(2563811-2563875)
chr7 (195-260)||(5797504-5797569)
chr7 (201-262)||(8054528-8054589)
chr7 (196-261)||(9574401-9574466)
chr7 (195-260)||(31492923-31492988)
chr7 (196-260)||(3734590-3734654)
chr7 (194-262)||(11221203-11221271)
chr7 (195-260)||(2350788-2350853)
chr7 (195-260)||(3329699-3329764)
chr7 (187-260)||(5108551-5108623)
chr7 (195-260)||(9731668-9731733)
chr7 (195-260)||(16365698-16365763)
chr7 (195-260)||(18662434-18662499)
chr7 (196-260)||(6013587-6013651)
chr7 (204-260)||(8979047-8979103)
chr7 (204-260)||(13759901-13759957)
chr7 (196-260)||(14196014-14196077)
chr7 (195-262)||(1584538-1584603)
chr7 (194-260)||(7397188-7397253)
chr7 (198-260)||(9916562-9916624)
chr7 (198-260)||(9924474-9924536)
chr7 (198-256)||(15303666-15303723)
chr7 (202-260)||(18661590-18661648)
chr7 (198-260)||(26134789-26134850)
chr7 (195-260)||(4986548-4986613)
chr7 (195-260)||(4990646-4990711)
chr7 (195-260)||(12329675-12329740)
chr7 (195-260)||(14755171-14755236)
chr7 (195-260)||(17153195-17153260)
chr7 (201-258)||(18369023-18369080)
chr7 (196-241)||(19153292-19153337)
chr7 (196-241)||(20752691-20752736)
chr7 (194-255)||(21230304-21230365)
chr7 (198-262)||(4785833-4785896)
chr7 (198-262)||(4818833-4818896)
chr7 (196-260)||(16297861-16297925)
chr7 (198-258)||(18449238-18449298)
chr7 (201-259)||(1848269-1848325)
chr7 (199-258)||(4579095-4579153)
chr7 (197-260)||(9500439-9500502)
chr7 (197-260)||(12181603-12181666)
chr7 (195-258)||(18495366-18495429)
chr7 (201-262)||(20582258-20582316)
chr7 (194-260)||(1872777-1872843)
chr7 (195-261)||(6042454-6042519)
chr7 (208-262)||(8313434-8313488)
chr7 (194-260)||(9245173-9245239)
chr7 (198-256)||(23093306-23093363)
chr7 (195-256)||(1587674-1587735)
chr7 (187-240)||(1814100-1814153)
chr7 (201-262)||(11803080-11803140)
chr7 (195-256)||(16306687-16306748)
chr7 (207-256)||(21227184-21227233)
chr7 (198-254)||(5047434-5047489)
chr7 (194-258)||(9261196-9261260)
chr7 (198-262)||(12391181-12391245)
chr7 (202-241)||(9720964-9721003)
chr7 (224-262)||(4449002-4449040)
chr7 (202-260)||(9866582-9866639)
chr7 (202-256)||(9890183-9890237)
chr7 (201-258)||(13418533-13418590)
chr7 (198-252)||(33035469-33035522)
chr7 (195-256)||(21912525-21912586)
chr7 (195-255)||(9130899-9130958)
chr7 (195-251)||(10648571-10648627)
chr7 (198-258)||(18466001-18466061)
chr7 (195-258)||(17077121-17077184)
chr7 (225-260)||(18467474-18467509)
chr7 (222-260)||(8877441-8877479)
chr7 (195-253)||(17151799-17151856)
chr7 (194-256)||(17160033-17160095)
chr7 (213-255)||(39273221-39273263)
chr7 (197-257)||(22339355-22339418)
chr7 (194-258)||(1882361-1882425)
chr7 (198-258)||(4258929-4258988)
chr7 (220-260)||(21102334-21102374)
[»] chr2 (37 HSPs)
chr2 (195-260)||(25888261-25888326)
chr2 (195-260)||(29719272-29719337)
chr2 (201-260)||(17743517-17743576)
chr2 (201-260)||(27909160-27909219)
chr2 (196-255)||(45553124-45553183)
chr2 (195-260)||(15339231-15339296)
chr2 (195-260)||(32085456-32085521)
chr2 (196-260)||(20174676-20174740)
chr2 (198-260)||(8447091-8447152)
chr2 (198-260)||(8503111-8503173)
chr2 (201-262)||(25196010-25196070)
chr2 (195-255)||(26603396-26603456)
chr2 (197-261)||(31804940-31805004)
chr2 (196-263)||(28770481-28770548)
chr2 (187-260)||(11382794-11382867)
chr2 (195-260)||(25618550-25618614)
chr2 (195-256)||(45621926-45621987)
chr2 (196-260)||(12953335-12953399)
chr2 (196-260)||(17349352-17349414)
chr2 (203-262)||(30411679-30411738)
chr2 (198-260)||(12557750-12557811)
chr2 (198-260)||(19200176-19200237)
chr2 (202-259)||(32440039-32440095)
chr2 (201-262)||(25530445-25530507)
chr2 (197-260)||(25885501-25885563)
chr2 (224-262)||(25535296-25535334)
chr2 (199-260)||(23011804-23011864)
chr2 (205-258)||(25939161-25939213)
chr2 (201-261)||(17635815-17635875)
chr2 (195-251)||(20173348-20173403)
chr2 (195-259)||(30900886-30900950)
chr2 (197-260)||(13776334-13776396)
chr2 (195-234)||(27418350-27418389)
chr2 (201-244)||(28925521-28925563)
chr2 (196-252)||(5777211-5777266)
chr2 (196-256)||(5792823-5792882)
chr2 (201-261)||(17675670-17675730)
[»] chr1 (50 HSPs)
chr1 (195-260)||(21449082-21449147)
chr1 (195-262)||(24306344-24306411)
chr1 (201-260)||(25405671-25405730)
chr1 (201-259)||(15544008-15544066)
chr1 (194-260)||(23038053-23038118)
chr1 (187-260)||(13345377-13345450)
chr1 (195-258)||(9787922-9787985)
chr1 (195-258)||(17359155-17359218)
chr1 (197-259)||(22664201-22664263)
chr1 (198-260)||(26540892-26540953)
chr1 (195-260)||(3591694-3591759)
chr1 (203-260)||(17610297-17610354)
chr1 (195-260)||(17837510-17837575)
chr1 (201-262)||(18736279-18736340)
chr1 (195-260)||(27117759-27117824)
chr1 (201-260)||(18825655-18825713)
chr1 (197-260)||(24281272-24281335)
chr1 (197-252)||(32383047-32383102)
chr1 (194-260)||(12012841-12012907)
chr1 (201-258)||(29242518-29242575)
chr1 (196-260)||(16359865-16359928)
chr1 (201-257)||(21988026-21988082)
chr1 (201-260)||(12208600-12208659)
chr1 (197-260)||(21847629-21847691)
chr1 (201-262)||(14779564-14779625)
chr1 (195-260)||(15813196-15813260)
chr1 (205-258)||(16179010-16179063)
chr1 (195-260)||(16787767-16787832)
chr1 (197-258)||(51473919-51473978)
chr1 (195-260)||(33190670-33190735)
chr1 (185-260)||(15813565-15813641)
chr1 (201-257)||(21334763-21334819)
chr1 (216-260)||(21666649-21666693)
chr1 (194-258)||(22620254-22620318)
chr1 (196-260)||(26649012-26649075)
chr1 (195-258)||(24267825-24267888)
chr1 (197-244)||(34480964-34481011)
chr1 (201-262)||(16069590-16069650)
chr1 (195-260)||(44795362-44795426)
chr1 (196-260)||(147625-147689)
chr1 (194-260)||(9401501-9401563)
chr1 (216-260)||(24214558-24214602)
chr1 (193-242)||(31236107-31236158)
chr1 (203-234)||(10064637-10064668)
chr1 (198-241)||(33712660-33712702)
chr1 (196-258)||(17121523-17121584)
chr1 (203-257)||(22622892-22622945)
chr1 (197-255)||(28008100-28008158)
chr1 (201-262)||(18830481-18830541)
chr1 (224-260)||(727489-727525)
[»] scaffold0008 (3 HSPs)
scaffold0008 (195-262)||(54853-54920)
scaffold0008 (201-256)||(48235-48290)
scaffold0008 (223-261)||(234362-234400)
[»] chr5 (42 HSPs)
chr5 (196-262)||(25550543-25550609)
chr5 (195-260)||(15469929-15469994)
chr5 (197-260)||(24266996-24267058)
chr5 (197-260)||(24343627-24343689)
chr5 (195-260)||(18208290-18208354)
chr5 (201-260)||(19004267-19004326)
chr5 (194-260)||(24852213-24852279)
chr5 (201-262)||(15375921-15375982)
chr5 (194-259)||(15690770-15690834)
chr5 (195-260)||(17171594-17171659)
chr5 (195-260)||(19086220-19086285)
chr5 (198-255)||(23380303-23380360)
chr5 (195-255)||(18937741-18937800)
chr5 (201-260)||(20315471-20315529)
chr5 (195-258)||(22755514-22755577)
chr5 (195-262)||(26121363-26121429)
chr5 (203-261)||(17431884-17431942)
chr5 (201-259)||(24140442-24140499)
chr5 (195-260)||(19283896-19283961)
chr5 (197-262)||(25402376-25402441)
chr5 (201-262)||(34128636-34128696)
chr5 (198-262)||(17185459-17185523)
chr5 (197-241)||(20419951-20419995)
chr5 (195-257)||(19051542-19051604)
chr5 (198-255)||(15544047-15544103)
chr5 (219-260)||(17315141-17315182)
chr5 (203-260)||(23388879-23388935)
chr5 (203-260)||(24245585-24245642)
chr5 (195-239)||(24662212-24662256)
chr5 (202-262)||(28253281-28253340)
chr5 (201-240)||(20744872-20744911)
chr5 (195-262)||(26110501-26110567)
chr5 (203-258)||(36175135-36175189)
chr5 (202-235)||(17769461-17769494)
chr5 (203-260)||(39434464-39434520)
chr5 (195-251)||(24167634-24167690)
chr5 (198-250)||(32417407-32417458)
chr5 (204-260)||(34487640-34487695)
chr5 (212-255)||(20534099-20534141)
chr5 (198-260)||(26307600-26307660)
chr5 (197-255)||(9521009-9521066)
chr5 (196-260)||(26313713-26313777)
[»] scaffold0622 (1 HSPs)
scaffold0622 (196-256)||(722-782)
[»] scaffold0650 (1 HSPs)
scaffold0650 (197-260)||(6282-6345)
[»] scaffold0035 (1 HSPs)
scaffold0035 (200-260)||(69911-69971)
[»] scaffold0672 (1 HSPs)
scaffold0672 (195-262)||(1727-1794)
[»] scaffold0838 (1 HSPs)
scaffold0838 (203-260)||(2371-2428)
[»] scaffold0832 (1 HSPs)
scaffold0832 (203-260)||(2402-2459)
[»] scaffold0136 (1 HSPs)
scaffold0136 (195-260)||(15506-15571)
[»] scaffold0048 (1 HSPs)
scaffold0048 (197-258)||(78589-78650)
[»] scaffold0024 (1 HSPs)
scaffold0024 (195-260)||(39577-39642)
[»] scaffold0016 (2 HSPs)
scaffold0016 (198-255)||(12105-12162)
scaffold0016 (203-260)||(3533-3589)
[»] scaffold0957 (1 HSPs)
scaffold0957 (195-260)||(3146-3210)
[»] scaffold0001 (2 HSPs)
scaffold0001 (195-260)||(69075-69139)
scaffold0001 (194-244)||(81479-81529)
[»] scaffold0155 (1 HSPs)
scaffold0155 (197-260)||(36036-36099)
[»] scaffold0653 (1 HSPs)
scaffold0653 (194-260)||(4524-4590)
[»] scaffold0638 (1 HSPs)
scaffold0638 (204-258)||(866-919)
[»] scaffold0063 (1 HSPs)
scaffold0063 (195-241)||(51116-51162)
[»] scaffold0042 (1 HSPs)
scaffold0042 (204-258)||(29909-29962)
[»] scaffold0238 (1 HSPs)
scaffold0238 (195-260)||(19104-19168)
[»] scaffold1869 (1 HSPs)
scaffold1869 (202-262)||(428-488)
[»] scaffold0056 (1 HSPs)
scaffold0056 (202-262)||(21277-21336)
[»] scaffold0054 (1 HSPs)
scaffold0054 (195-255)||(72065-72125)
[»] scaffold0043 (1 HSPs)
scaffold0043 (197-256)||(89899-89957)
[»] scaffold0006 (2 HSPs)
scaffold0006 (194-253)||(18793-18852)
scaffold0006 (196-253)||(223078-223135)
[»] scaffold0090 (1 HSPs)
scaffold0090 (197-255)||(7458-7516)
[»] scaffold0019 (2 HSPs)
scaffold0019 (203-260)||(181747-181803)
scaffold0019 (198-256)||(11236-11294)
[»] scaffold0620 (1 HSPs)
scaffold0620 (204-240)||(7661-7697)
[»] scaffold0102 (1 HSPs)
scaffold0102 (196-260)||(35531-35595)
[»] scaffold0062 (1 HSPs)
scaffold0062 (224-260)||(43268-43304)
[»] scaffold0394 (1 HSPs)
scaffold0394 (198-237)||(13971-14010)
[»] scaffold0128 (1 HSPs)
scaffold0128 (195-240)||(37419-37464)
[»] scaffold0427 (1 HSPs)
scaffold0427 (195-223)||(2885-2913)


Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 18 - 262
Target Start/End: Complemental strand, 29382644 - 29382400
Alignment:
Q  18 agtgtcgtcatcaagaatatatgcaacatccattttgtgattaaattgaaacaaatagtgatcatcctccgcataaagaatcttaacacgcttttccgac 117  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29382644 agtgtcgtcatcaagaatatatacaacatccattttgtgattaaattgaaacaaatagtgatcatcctccgcataaagaatcttaacacgcttttccgac 29382545  T
Q  118 ttccaggtgctagccacacgttcactaaagtaagaaacttatttttcctatcttccaggagtcggtcaatgatgtatggattaggcaagtgtaccaaatc 217  Q
    ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29382544 ttctaggtgctagccacacgtttacgaaagtaagaaacttatttttcctatcttccaagagtcggtcaatgatgtatggattaggcaagtgtaccaaatc 29382445  T
Q  218 gtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  29382444 gtttaccaagtaataaagtgataagtagagtatcgtatccacagg 29382400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 5850934 - 5850999
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  5850934 ggattagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 5850999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 14528142 - 14528207
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  14528142 ggattaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccaca 14528207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 24114388 - 24114321
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||    
T  24114388 ggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagg 24114321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 17976612 - 17976677
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||| |||||||||||||||    
T  17976612 ggattaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccaca 17976677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 30783835 - 30783782
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 30783782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 30235369 - 30235421
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaa 246  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  30235369 tggattaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagtaaa 30235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 31288354 - 31288413
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31288354 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatcca 31288413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 19786724 - 19786787
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  19786724 ggattagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatcca 19786787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 30806603 - 30806540
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||| |||||||||||  |||||||||||||||||||| |||||||||||||    
T  30806603 ggattaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatcca 30806540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 17101990 - 17101936
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 17101936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 24269592 - 24269657
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||||    
T  24269592 gattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagg 24269657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 24904630 - 24904692
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacag 24904692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 26008019 - 26008077
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  26008019 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatc 26008077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 34497109 - 34497171
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||    
T  34497109 gattaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatcca 34497171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 13315097 - 13315033
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||    
T  13315097 ggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccaca 13315033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 24110761 - 24110696
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  24110761 ggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 5053026 - 5052962
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||  ||||||||||| |||||| ||||| |||||||||    
T  5053026 gattaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccaca 5052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 15238794 - 15238857
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| ||||| ||||||||||||| ||| ||||||||| | |||||||||||||    
T  15238794 attaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccaca 15238857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 24723540 - 24723482
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||||| || || |||||||||||||||||||||||||||||||||||||||    
T  24723540 ggcatgtgtaccaa-tcattcaccaagtaataaagtgataagtaaagtatcgtatccaca 24723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 28276863 - 28276801
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||||||||  |||||||||||||    
T  28276863 ggattaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatcca 28276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 14075590 - 14075652
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| || ||||||||||| |||||||||||| ||||||||||||| | |||||||||||||    
T  14075590 ttaggaaattgtaccaaatcttttaccaagtaagaaagtgataagtagactatcgtatccaca 14075652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 2637603 - 2637656
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 2637656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 6884951 - 6885011
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||| ||||||| |||| ||||||||||||||||||  |||||||||||    
T  6884951 ggattaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatc 6885011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 30122260 - 30122196
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||  || ||||||||||||||| |||||| |||||| ||||||||    
T  30122260 ggattaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccaca 30122196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 14628371 - 14628431
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    ||||||||||| ||||||||| |||||||||||||||  ||||||||||| ||| ||||||    
T  14628371 attaggcaagtttaccaaatcatttaccaagtaataatatgataagtaaaatattgtatcc 14628431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 25226137 - 25226189
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtat 25226189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 44011116 - 44011065
Alignment:
Q  208 gtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  44011116 gtaccaaatcgtttacgaagtaataaagtg-taagtagagtatcgtatccaca 44011065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 236
Target Start/End: Original strand, 13697857 - 13697896
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagt 236  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  13697857 attaggcaagtgtaccaaatcgtttaccaattaataaagt 13697896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 17509246 - 17509304
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||    
T  17509246 ggcacgtgtaccaa-tcgttaaccaagtaataaagtgataagtagagtatcatatccaca 17509304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 24119871 - 24119810
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||| |||||||||||||||||| |||||||| |||||| ||||| |||||||||    
T  24119871 ttagacaagtgtgccaaatcgtttaccaagttataaagtg-taagtagagtattgtatccaca 24119810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 25182534 - 25182469
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||| |||||||  |||||||| ||||||||||| ||||| |||||||||| ||||    
T  25182534 ggattagacaagtggaccaaattatttaccaaataataaagtgacaagtagagtatcgtattcaca 25182469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 18448639 - 18448587
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||| |||||||||||||||||| |||| || || ||||||||    
T  18448639 aagtgtaccaaatcatttaccaagtaataaagtaataattagagcatcgtatc 18448587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 24644832 - 24644895
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| |||||||| ||||||  ||||||||||||||||||| |||||| ||||| |||||||||    
T  24644832 gattatgcaagtgtgccaaattatttaccaagtaataaagtg-taagtagagtattgtatccaca 24644895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 17969413 - 17969468
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||| || |||| |||| |||||||||||||||||| || |||||||||||    
T  17969413 ggcaagtgtgccgaatcatttatcaagtaataaagtgataaatatagtatcgtatc 17969468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 26615339 - 26615285
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||| ||||||||| ||||| ||||||||||||||||| ||||| |||||||    
T  26615339 caagtgtatcaaatcgtt-accaactaataaagtgataagtagagtattgtatcca 26615285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 14006091 - 14006153
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| ||||||| || ||| |||||||||||||||| ||||||||| |||||| ||| ||||    
T  14006091 ttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagtatcatattcaca 14006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 220 - 262
Target Start/End: Original strand, 21314641 - 21314683
Alignment:
Q  220 ttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  21314641 ttaccaagtaataaagtgataagtagtgtatcgtatctacagg 21314683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 27659455 - 27659499
Alignment:
Q  212 caaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||  | |||||||||||||||||||| |||||||||||    
T  27659455 caaatcgttagcgaagtaataaagtgataagtagagtatcgtatc 27659499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 168403 - 168337
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  168403 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 168337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 14648889 - 14648955
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14648889 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 14648955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 17671995 - 17672060
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  17671995 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccaca 17672060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 13692774 - 13692710
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  13692774 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccaca 13692710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 17951402 - 17951339
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17951402 ggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 17955254 - 17955191
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17955254 ggattagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatcca 17955191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 13908854 - 13908912
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 13908912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 19562284 - 19562219
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  19562284 ggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccaca 19562219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 11490525 - 11490592
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||| ||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  11490525 ggattaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagg 11490592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 9737615 - 9737561
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagta 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9737615 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagta 9737561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 12578372 - 12578307
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||||||||||    
T  12578372 ggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccaca 12578307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 13128978 - 13128917
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||    
T  13128978 attaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatcca 13128917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 19492798 - 19492741
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccaca 19492741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 202 - 258
Target Start/End: Original strand, 17709757 - 17709813
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcca 17709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 5679200 - 5679259
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  5679200 attagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatc 5679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 22176064 - 22176005
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatcca 22176005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 11700676 - 11700610
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| |||||||||||||| ||||||||||||||||| |||||| || |||||||||||||||    
T  11700676 tggattagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca 11700610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 15047120 - 15047182
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||||||    
T  15047120 tggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatc 15047182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 15107304 - 15107242
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||| || ||||||||    
T  15107304 tggattaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatc 15107242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 20829844 - 20829798
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20829844 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 20829798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 13992982 - 13992917
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||| ||||||||||||| |||||||||||||||||||| |||||| |||||||||||||||    
T  13992982 ggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccaca 13992917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 19882633 - 19882694
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||||||    
T  19882633 ggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatc 19882694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 19929777 - 19929716
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || |||||||||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccaca 19929716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 21323981 - 21323916
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||| |||| |||||||||||||||    
T  21323981 ggattaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccaca 21323916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 25121331 - 25121267
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| |||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  25121331 ggattaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccaca 25121267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 7582299 - 7582355
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  7582299 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 7582355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 12318426 - 12318481
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtat 250  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  12318426 ggattaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 17216816 - 17216875
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| ||||||||||||||||||||| |||||||||||||||| |||||| ||||||||    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccaca 17216875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 9052667 - 9052728
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||    
T  9052667 ggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatcc 9052728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 20315000 - 20315058
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||| ||||||||| | |||| ||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccaca 20315058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 249
Target Start/End: Complemental strand, 22357640 - 22357587
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagta 249  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  22357640 gattaggtaagtgtactaaatcatttaccaagtaataaagtgataagtaaagta 22357587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 207 - 260
Target Start/End: Original strand, 22526369 - 22526422
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccaca 22526422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 11521288 - 11521232
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacaca 11521232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 19092289 - 19092345
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 252  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  19092289 gattaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcg 19092345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 40227770 - 40227817
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 243  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40227770 ggattaggcaagtgtaccaaatcg-ttaccaagtaataaagtgataagt 40227817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 15164768 - 15164827
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||||||||| || | ||||| | |||||||||||||||||    
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagg 15164827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 12839887 - 12839821
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||| |||||||| |||||| ||||||| ||||||| ||||| ||| |||||||||||||||    
T  12839887 tggattaggaaagtgtacaaaatcgcttaccaattaataaaatgataggtagagtatcgtatccaca 12839821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 19900576 - 19900637
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||| |||||| ||| ||||    
T  19900576 ttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcaca 19900637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 24639535 - 24639495
Alignment:
Q  220 ttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  24639535 ttaccaagtaataaagtgataagtagagtatcgtatccaca 24639495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 13587231 - 13587270
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  13587231 gcaagtgtaccaaatcgtttaccaaataataaagtgataa 13587270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 259
Target Start/End: Complemental strand, 19374909 - 19374855
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||||||||||||| ||||||||||| || |||||| ||||||||||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccac 19374855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 26116001 - 26115947
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  26116001 caagtgtaccaaatcgtttatcaagtaataacgtg-taattaaagtatcgtatcca 26115947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 244
Target Start/End: Complemental strand, 1833696 - 1833650
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 244  Q
    ||||||||||  | |||||||||||||||||||||||||||||||||    
T  1833696 ttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagta 1833650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 11933414 - 11933460
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 243  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||    
T  11933414 attaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt 11933460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 3774818 - 3774882
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||| ||||| |||||| |||||||||||||  ||||| |||||| ||||||||    
T  3774818 ggattaggcaagtgtatcaaattgtttactaagtaataaagtg-caagtagagtatcatatccaca 3774882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 261
Target Start/End: Original strand, 11093966 - 11094023
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    ||||||| ||||||||||||||||||||||| ||||| ||| ||| || |||||||||    
T  11093966 aagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacag 11094023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 234
Target Start/End: Original strand, 10107007 - 10107043
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaa 234  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10107007 ttaggcaagtgtagcaaatcgtttaccaagtaataaa 10107043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 43941880 - 43941828
Alignment:
Q  208 gtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||  |||| |||||||||||||||||||||| ||||| ||||||||    
T  43941880 gtaccaaattatttatcaagtaataaagtgataagtaaggtatcctatccaca 43941828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 256
Target Start/End: Original strand, 12761272 - 12761303
Alignment:
Q  225 aagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||||||||||||||||||    
T  12761272 aagtaataaagtgataagtaaagtatcgtatc 12761303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 15050185 - 15050146
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 237  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  15050185 ttaggcaagtgtatcaaatcatttaccaagtaataaagtg 15050146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 15104239 - 15104278
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 237  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  15104239 ttaggcaagtgtatcaaatcatttaccaagtaataaagtg 15104278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 25643460 - 25643522
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||| |||||||| |||||||||  |||||||||||||| ||| || |||||||||||||||||    
T  25643460 taggtaagtgtactaaatcgtttgtcaagtaataaagtg-taactagagtatcgtatccacagg 25643522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 17337247 - 17337178
Alignment:
Q  188 gatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||| ||||||| | |||| ||||||||| || ||| |||||||| |||||||||| |||||||||||||    
T  17337247 gatgtgtggattaagtaagtctaccaaatcatt-accgagtaataacgtgataagtagagtatcgtatcca 17337178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 16730499 - 16730442
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||| |||||| |||||| |||| ||| || ||||||||||||| |||||||||||||    
T  16730499 ggcatgtgtactaaatcgcttacgaagaaagaaagtgataagtagagtatcgtatcca 16730442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 19636682 - 19636631
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||| || ||||||||||||| |||||| ||||| |||||    
T  19636682 aagtgtaccaaatcgtt-acaaagtaataaagtggtaagtagagtattgtatc 19636631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 22218703 - 22218644
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||| || ||||| |||| ||||| |||||||||||||| |||||| |||||||||||||    
T  22218703 ttaggtaactgtacaaaattgtttatcaagtaataaagtg-taagtagagtatcgtatcca 22218644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 9726015 - 9726080
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9726015 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 9726080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 21907425 - 21907490
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21907425 ggattaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 21907490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 12183437 - 12183372
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12183437 ggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccaca 12183372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 17729145 - 17729210
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17729145 ggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 17729210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 21672541 - 21672476
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21672541 ggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21672476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 8241270 - 8241335
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  8241270 ggattaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccaca 8241335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 21679957 - 21679892
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  21679957 ggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccaca 21679892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 25927409 - 25927344
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||    
T  25927409 ggattaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccaca 25927344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 23143715 - 23143782
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||||||||    
T  23143715 ggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagg 23143782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 7543066 - 7543005
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  7543066 ggattaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatc 7543005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 9516786 - 9516843
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccaca 9516843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 11176943 - 11177008
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||||||| |||||||||||||||    
T  11176943 ggattaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccaca 11177008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 14079548 - 14079491
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgta 254  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  14079548 attaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatcgta 14079491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 27737795 - 27737730
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| || |||||    
T  27737795 ggattaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccaca 27737730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 21932155 - 21932100
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 253  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgt 21932100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 207 - 258
Target Start/End: Complemental strand, 23645861 - 23645810
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcca 23645810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 5624635 - 5624689
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 251  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  5624635 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 28589533 - 28589471
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||| |||||    
T  28589533 ttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccaca 28589471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 15466363 - 15466423
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||    
T  15466363 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatc 15466423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 20005977 - 20005924
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatc 20005924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 22567833 - 22567898
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| |||||||||||||||| |||| ||||| ||||| |||||||||    
T  22567833 ggattaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccaca 22567898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 18075494 - 18075430
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||    
T  18075494 ggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccac 18075430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 20145166 - 20145106
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  20145166 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 20145106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 22187673 - 22187733
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  22187673 ggattaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtatggtat 22187733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 4339722 - 4339793
Alignment:
Q  189 atgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| |||||||| |||||||||||||| ||||| ||| ||||||||||||||||| ||||| |||||||||    
T  4339722 atgtgtggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccaca 4339793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 2586716 - 2586769
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtat 250  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||| |||||    
T  2586716 attaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat 2586769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 28933766 - 28933701
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| |||||||||| || ||||| ||| ||||||||||||||||| |||||||||||||||    
T  28933766 ggattaggaaagtgtaccatattgtttagcaaataataaagtgataagtagagtatcgtatccaca 28933701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 8039237 - 8039178
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||||||||| ||||||||||||||||||||||||||| |||||  ||||||||||    
T  8039237 ggattaggcaagtgtgccaaatcgtttaccaagtaataaagtg-taagtggagtatcgtat 8039178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 17299925 - 17299877
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtat 17299877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 19244579 - 19244635
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 252  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||| |||||||    
T  19244579 gattaggcaagtttactagatcgtttaccaagtaataaagtgataagtagagtatcg 19244635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 23844562 - 23844510
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatc 23844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 27124589 - 27124537
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||||||||||||||||||||||||||| || | |||||||||    
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatc 27124537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 21688901 - 21688838
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||| ||||||||| |||||||||| ||||||| |||||||||||| ||||| |||||||    
T  21688901 ggattaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatcca 21688838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 22566256 - 22566203
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||  |||||||||||||||||||||||||| |||||| ||||||||    
T  22566256 tgtaccaaattatttaccaagtaataaagtgataagtagagtatcatatccaca 22566203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 199 - 243
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 243  Q
    |||||||||||||||||||  ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 218 - 262
Target Start/End: Complemental strand, 22410410 - 22410366
Alignment:
Q  218 gtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||    
T  22410410 gtttaccaagtaataaaatgataagtagagtatcgtatccacagg 22410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 17827192 - 17827133
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||  |||||||||||| |||| || |||||||||||||||    
T  17827192 ggcaagtgtaccaactcgtttaataagtaataaagttataaatagagtatcgtatccaca 17827133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 20722278 - 20722218
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| ||||||||||||||||||||||||||||||  |||||| |||||  ||||||||    
T  20722278 ttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccaca 20722218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 34478532 - 34478582
Alignment:
Q  209 taccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||||    
T  34478532 taccaaatcgtttaccaaataataaagtg-taagtagagtatcgtatccaca 34478582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 28586133 - 28586075
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||| ||||| |||||||||||||||| ||||||||| ||||||||| |||||| ||||    
T  28586133 ttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatc 28586075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 17382144 - 17382205
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||| ||||| ||||||||||||||  ||||||||||| |||| ||||||||||| |||||    
T  17382144 ggcaaatgtactaaatcgtttaccaatgaataaagtgatgagtagagtatcgtatctacagg 17382205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 262
Target Start/End: Original strand, 24251511 - 24251576
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||| ||||||||| ||| ||||||||||||||||||||| ||||| | || |||| |||||||||    
T  24251511 attaagcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagg 24251576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 34092363 - 34092327
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgata 240  Q
    ||||||| |||||||||||||||||||||||||||||    
T  34092363 aagtgtatcaaatcgtttaccaagtaataaagtgata 34092327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 9899062 - 9899024
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt 236  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  9899062 ttagacaagtgtaccaaattgtttaccaagtaataaagt 9899024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 17883890 - 17883852
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataa 233  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  17883890 ggattagccaaatgtaccaaatcgtttaccaagtaataa 17883852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 23232067 - 23232026
Alignment:
Q  217 cgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||||||||||||||  ||||| ||||||    
T  23232067 cgtttaccaagtaataaagtgataagtagggtatcatatcca 23232026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 255
Target Start/End: Original strand, 25781796 - 25781848
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||||||||||  ||||||||| |||||| || | ||||||||    
T  25781796 caagtgtaccaaatcgtttactgagtaataaaatgataaatagaatatcgtat 25781848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 26587622 - 26587662
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagta 244  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  26587622 aagtgtatcaaatcgtataccacgtaataaagtgataagta 26587662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 21301911 - 21301976
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21301911 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21301976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 10917912 - 10917976
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  10917912 gattaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 10917976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 12805996 - 12805931
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  12805996 ggattaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 12805931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 21325334 - 21325398
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||    
T  21325334 gattaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccaca 21325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 189 - 260
Target Start/End: Complemental strand, 18458536 - 18458465
Alignment:
Q  189 atgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| |||||||| |||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||    
T  18458536 atgtgtggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 12759383 - 12759445
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  12759383 ttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccaca 12759445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 6289896 - 6289961
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  6289896 ggattaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccaca 6289961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 10744897 - 10744958
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  10744897 attaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttcca 10744958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 16245835 - 16245770
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||    
T  16245835 ggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccaca 16245770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 22349410 - 22349467
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 22349467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 821619 - 821555
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| ||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  821619 gattaagcatgtctaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 821555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 2167721 - 2167658
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  2167721 gattagacaagtgtaccaaatcgtt-accaagtaataaagtgataagtagagtatcgtatccaca 2167658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 19908307 - 19908365
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccaca 19908365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 3116522 - 3116458
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||| |||||||||||    
T  3116522 attaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagg 3116458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 4650231 - 4650291
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| || ||||||||||||||||||||| ||||||||||||||||||||||    
T  4650231 ggcaagtgtaccaa-tcatttaccaagtaataaagtgatgagtaaagtatcgtatccacagg 4650291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 12411144 - 12411209
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||||    
T  12411144 ggataaggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccaca 12411209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 41508360 - 41508421
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||| | |||||||||    
T  41508360 ggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatc 41508421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 21825973 - 21825910
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| ||||||||||||||||||||| |||||||||||| |||||| |||||||||||||||    
T  21825973 gattaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccaca 21825910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 8770019 - 8770077
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccaca 8770077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 259
Target Start/End: Original strand, 10923150 - 10923204
Alignment:
Q  205 agtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||||||| ||||||||||||||||||||||| || ||||||||||||||    
T  10923150 agtgtaccaaatcatttaccaagtaataaagtgataattacagtatcgtatccac 10923204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 18736775 - 18736710
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaggt 263  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||| | ||||||||| ||||||    
T  18736775 attagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggt 18736710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 20429703 - 20429764
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||| |||||| |||| ||||||||||||||||| ||||||||| |||||||||||    
T  20429703 ggattaggcatgtgtactaaattgtttaccaagtaataaaatgataagtagagtatcgtatc 20429764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 21303460 - 21303395
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| ||||||||| ||||||||||||||| ||||||| ||||||||| ||||||||| |||||    
T  21303460 ggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccaca 21303395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 11518065 - 11518001
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||| | |||| |||||||||    
T  11518065 attaagcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatccacag 11518001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 13908332 - 13908269
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||| |||||| ||||||    
T  13908332 tggattaggaaagtgtaccaaatctttt-ccaagtaataaagtgataagtagagtatcatatcca 13908269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 8765117 - 8765175
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  8765117 ggcaggtgtaccaa-tcgttaaccaattaataaagtgataagtaaagtatcgtatccaca 8765175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 31286120 - 31286054
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||| || | |||||||||||||||    
T  31286120 ggattagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagg 31286054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 5508331 - 5508377
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt 243  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||    
T  5508331 attaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt 5508377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 262
Target Start/End: Original strand, 8319034 - 8319099
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||| |||||| |||||||||||||||| |||||||||||| | ||| |||||||||||    
T  8319034 gattaggcaagtataccaa-tcgtttaccaagtaatgaagtgataagtagaatatagtatccacagg 8319099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 21083307 - 21083368
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||| ||||||||| ||||| ||||||| ||| |||||||||||||||||||||    
T  21083307 ttaggcaagtgtaacaaatcgtt-accaaataataaaatgacaagtaaagtatcgtatccaca 21083368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 28728940 - 28729002
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||  |||||  |||| ||||||||||||||||||||| |||||||||||||||    
T  28728940 ttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccaca 28729002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 259
Target Start/End: Complemental strand, 11533073 - 11533017
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||||||| | |||||||| ||||||||||||||||| |||| |||||||||    
T  11533073 caagtgtaccaaaacatttaccaaataataaagtgataagtagagtaccgtatccac 11533017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 27543011 - 27542956
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccaca 27542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 8143609 - 8143671
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||| |||||||||||||||||||| ||| ||||||||| |||||| ||||| ||||||||    
T  8143609 gattaggtaagtgtaccaaatcgtttactaagcaataaagtg-taagtagagtattgtatccac 8143671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Complemental strand, 19171940 - 19171893
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataag 242  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  19171940 ggattaggcaagtatactaaattgtttaccaagtaataaagtgataag 19171893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 229
Target Start/End: Original strand, 22245343 - 22245377
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagta 229  Q
    |||||||||||||||||||||||||||||||||||    
T  22245343 ggattaggcaagtgtaccaaatcgtttaccaagta 22245377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 7147981 - 7148045
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| ||||||||||||||||||||||| ||||   ||||||| |||||||| ||||||    
T  7147981 ggattaggcaaatgtaccaaatcgtttaccaagtactaaa-aaataagtagagtatcgtctccaca 7148045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 8557211 - 8557170
Alignment:
Q  219 tttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| ||||||||||||||||||| |||||||||||||||    
T  8557211 tttaccgagtaataaagtgataagtagagtatcgtatccaca 8557170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 51119341 - 51119293
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 251  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  51119341 gcaagtgtatcaaatcgtt-accaaataataaagtgataagtaaagtatc 51119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Original strand, 932742 - 932801
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    |||||||||| ||| |||||||| |||||||||| |||||| || ||||||||||||||||    
T  932742 ggcaagtgtatcaa-tcgtttactaagtaataaattgataaatagagtatcgtatccacag 932801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 17438527 - 17438472
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||| ||||||||| ||||| ||||||||| |||||| ||||||||    
T  17438527 aagtgtaccaaatcg-ttaccaagttataaaatgataagtagagtatcatatccaca 17438472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Original strand, 12752203 - 12752242
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 237  Q
    |||| ||||||||||||||||||||||||||||| |||||    
T  12752203 ttagccaagtgtaccaaatcgtttaccaagtaatgaagtg 12752242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 7478446 - 7478392
Alignment:
Q  185 aatgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgat 239  Q
    ||||||||  |||| ||||||||||||||||  ||||||||| ||||||||||||    
T  7478446 aatgatgtgcggatcaggcaagtgtaccaaactgtttaccaaataataaagtgat 7478392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 262
Target Start/End: Complemental strand, 8889229 - 8889191
Alignment:
Q  224 caagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagg 8889191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 19706894 - 19706837
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||| ||||| ||||||||| |||||||| | ||||||||||||| ||||||||    
T  19706894 gcaagtgtatcaaattgtttaccaaataataaagag-taagtaaagtatcatatccaca 19706837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 20339866 - 20339805
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| |||| || ||||||||||||||||||||||| || |||||| |||||||||| ||||    
T  20339866 ttagggaagtatatcaaatcgtttaccaagtaataaaatg-taagtagagtatcgtattcaca 20339805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 21019698 - 21019637
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||  |||||||||| | |||||||||||||||| ||||||| |||||| ||||||||    
T  21019698 ttaggcaacagtaccaaatcatctaccaagtaataaagt-ataagtagagtatcttatccaca 21019637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 25756671 - 25756733
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| ||||| |||| ||| ||||||||   |||||| |||||||||||||||    
T  25756671 ttaggcaagtgtacaaaatcatttatcaaataataaagaagtaagtagagtatcgtatccaca 25756733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 21074636 - 21074580
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    |||| ||||||||||| | || |||||||||||||| |||||| ||||||||||||||    
T  21074636 gcaactgtaccaaatcatctatcaagtaataaagtg-taagtagagtatcgtatccac 21074580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 258
Target Start/End: Complemental strand, 23056269 - 23056214
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||| |||| ||||||||||||||| ||||| |||||  |||||||||||||    
T  23056269 gcaagtgtatcaaaacgtttaccaagtaatgaagtg-taagttgagtatcgtatcca 23056214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 10587131 - 10587063
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  10587131 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagg 10587063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 7318266 - 7318331
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  7318266 ggattaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 7318331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 10584600 - 10584527
Alignment:
Q  187 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  10584600 tgatgtttggattagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccaca 10584527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 15869587 - 15869650
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  15869587 tggattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatcc 15869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 23100056 - 23099993
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  23100056 attaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccaca 23099993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 10937598 - 10937660
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10937598 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccaca 10937660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 9864432 - 9864367
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  9864432 ggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 9864367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 8054158 - 8054099
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccaca 8054099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 5530014 - 5530080
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||    
T  5530014 ggattaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacag 5530080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 2563811 - 2563875
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  2563811 ggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 2563875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 5797504 - 5797569
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||| |||||||||||||||    
T  5797504 ggattaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccaca 5797569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 8054589 - 8054528
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacagg 8054528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 196 - 261
Target Start/End: Original strand, 9574401 - 9574466
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  9574401 gattaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacag 9574466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 31492923 - 31492988
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||    
T  31492923 ggatcaggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccaca 31492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 3734590 - 3734654
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||    
T  3734590 gattaggtaagtgtaccaaattttttaccaagtaataaagtgataagtagagtatcgtatccaca 3734654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 194 - 262
Target Start/End: Complemental strand, 11221271 - 11221203
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||||||| ||||| |||||||||||    
T  11221271 tggattaagcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagg 11221203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 2350853 - 2350788
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||| |||||||||||||||| || |||||| | |||||||||||||    
T  2350853 ggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccaca 2350788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 3329764 - 3329699
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| ||||||| |||||  |||||||||||||||||||||||||| |||||||||||||||    
T  3329764 ggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccaca 3329699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 5108551 - 5108623
Alignment:
Q  187 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||| ||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||||||    
T  5108551 tgatgtgtggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccaca 5108623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 9731733 - 9731668
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||| |||||    
T  9731733 ggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccaca 9731668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 16365698 - 16365763
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||  ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||    
T  16365698 ggattagaaaagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccaca 16365763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 18662434 - 18662499
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| ||||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||    
T  18662434 ggattaagcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccaca 18662499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 6013587 - 6013651
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| |||| |||||| | |||||||||||| |||||||||||||||    
T  6013587 gattaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccaca 6013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 8979103 - 8979047
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  8979103 aagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccaca 8979047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 13759957 - 13759901
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccaca 13759901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 14196077 - 14196014
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||    
T  14196077 gattaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccaca 14196014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 1584538 - 1584603
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||  |||||||||||||||||    
T  1584538 ggattaggcaagtgtaccaa-tcatttaccaagtaataaagtgataagt-gagtatcgtatccacagg 1584603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 7397188 - 7397253
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||| |||||||||||| ||||||||||||||||||||| ||| || |||||||||||||||    
T  7397188 tggattaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccaca 7397253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 9916562 - 9916624
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||| ||||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  9916562 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccaca 9916624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 9924474 - 9924536
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||| ||||||||| ||||||| |||||||||| ||||||| |||||||||||||||    
T  9924474 ttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccaca 9924536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 15303723 - 15303666
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  15303723 ttagacaagtgtaccaaatcgtttaccaggtaataaagtg-taagtaaagtatcgtatc 15303666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 18661590 - 18661648
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccaca 18661648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 26134850 - 26134789
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||    
T  26134850 ttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccaca 26134789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 4986548 - 4986613
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||    
T  4986548 ggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccaca 4986613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 4990646 - 4990711
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||| ||||| ||| |||||    
T  4990646 ggattagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccaca 4990711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 12329675 - 12329740
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| |||||||||||||||||||||||| ||| |||||| || ||||| |||||||||    
T  12329675 ggattaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccaca 12329740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 14755236 - 14755171
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||||||||||||||||| |||||| |||||||| ||||| |||||| ||||||||    
T  14755236 ggattagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccaca 14755171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 17153260 - 17153195
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||  ||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||||    
T  17153260 ggattagaaaagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccaca 17153195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 18369080 - 18369023
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||    
T  18369080 ggcaagtgtactaaatagtttaccaagtaataaagtgataagtagagtattgtatcca 18369023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 19153292 - 19153337
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  19153292 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 19153337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 20752691 - 20752736
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  20752691 gattaggcaagtgtaccaaatcttttaccaagtaataaagtgataa 20752736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 21230304 - 21230365
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||| || ||||||||||||||| ||||||| ||||||||| ||||||||||    
T  21230304 tggattaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtat 21230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 4785833 - 4785896
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  4785833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagg 4785896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 4818833 - 4818896
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  4818833 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcacatccacagg 4818896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 16297925 - 16297861
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||  ||||||||||||||| |||||||||| | |||||||| ||||    
T  16297925 gattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcaca 16297861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 18449238 - 18449298
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||| ||||| ||||||||||||||||||||| ||||| | |||||||||||    
T  18449238 ttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatcca 18449298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 1848325 - 1848269
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    |||||||||||||||| ||  ||||||||||||||||||||||| ||||||||||||||    
T  1848325 ggcaagtgtaccaaattgt--accaagtaataaagtgataagtacagtatcgtatccac 1848269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 4579095 - 4579153
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||    
T  4579095 taggcaagtgttccaaatcgtttactaagtaat-aagtgataagtagagtatcgtatcca 4579153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 9500439 - 9500502
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||| | || |||||||||||||||    
T  9500439 attaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccaca 9500502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 12181603 - 12181666
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| ||||||||||||||  |||||||||||||| ||||| |||| ||||||||||    
T  12181603 attaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccaca 12181666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 18495366 - 18495429
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| ||||||||| |||| |||||| |||||||||||||||||||||||||  |||||||    
T  18495366 ggattagtcaagtgtactaaattgtttactaagtaataaagtgataagtaaagtaatgtatcca 18495429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 20582258 - 20582316
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||| ||||||||||||||||||| ||||||||||||||||   ||||||||||||||||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagg 20582316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 1872777 - 1872843
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||  ||||||||| || |||||||| | ||||||||| |||||||||||||||    
T  1872777 tggattaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccaca 1872843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 261
Target Start/End: Original strand, 6042454 - 6042519
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    ||||||| |||||||| |||||||||||||| |||||||| || |||||| ||||||||||||||||    
T  6042454 ggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacag 6042519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 208 - 262
Target Start/End: Complemental strand, 8313488 - 8313434
Alignment:
Q  208 gtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||| ||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  8313488 gtacaaaatcatttaccaagtaataaagtgataagtagattatcgtatccacagg 8313434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 9245173 - 9245239
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| |||||| ||||||||||||||||| ||| || |||| | |||||||||||||||    
T  9245173 tggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccaca 9245239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 23093306 - 23093363
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| ||||| |||||    
T  23093306 ttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatc 23093363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 1587674 - 1587735
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||| ||||||||||||||||| ||||| ||||||||||| || |||||| ||||    
T  1587674 ggattaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatc 1587735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 240
Target Start/End: Original strand, 1814100 - 1814153
Alignment:
Q  187 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgata 240  Q
    |||||| | |||||||||||||||||||||  ||||||||||||||||||||||    
T  1814100 tgatgtgttgattaggcaagtgtaccaaattatttaccaagtaataaagtgata 1814153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 11803080 - 11803140
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| || || || |||||||||||||||||||| |||||||||||||||||    
T  11803080 ggcaagtgtaccaa-tctttaacaaagtaataaagtgataagtagagtatcgtatccacagg 11803140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 16306687 - 16306748
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||| ||||||||  ||||| |||| ||||||||||||||||||||| |||||||||||    
T  16306687 ggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatc 16306748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 256
Target Start/End: Original strand, 21227184 - 21227233
Alignment:
Q  207 tgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||||||    
T  21227184 tgtaccaaatcatttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 5047489 - 5047434
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgta 254  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| | |||||||    
T  5047489 ttaggcaagtgtaccaaatcatttaccaagtaataaagtg-taagtagattatcgta 5047434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 9261196 - 9261260
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||| | |||| ||||||||||||||||| ||| ||||||| | |||||||||||||    
T  9261196 tggattaggcaactttacctaatcgtttaccaagtaaaaaaatgataagcagagtatcgtatcca 9261260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 12391181 - 12391245
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||||| ||||||    
T  12391181 ttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacagg 12391245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 241
Target Start/End: Original strand, 9720964 - 9721003
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  9720964 gcaagtgtaccaaatcgtttaccaaataataaagtgataa 9721003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 4449002 - 4449040
Alignment:
Q  224 caagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagg 4449040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 9866639 - 9866582
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||| ||||||||| |||||||||| |||||| |||||| ||||||||    
T  9866639 gcaagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatccaca 9866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 256
Target Start/End: Original strand, 9890183 - 9890237
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||| |||||||||||| |||||||||||  |||||| |||||||||||    
T  9890183 gcaagtgtactaaatcgtttaccgagtaataaagtagtaagtagagtatcgtatc 9890237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 13418533 - 13418590
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaa-gtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||| ||||| ||||||||||||| |||||||||| |||||||||||||    
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatcca 13418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 252
Target Start/End: Original strand, 33035469 - 33035522
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 252  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| ||| |||||||    
T  33035469 ttaggcaagtgtatcaaatcgtttacc-agtaataaagtgataggtagagtatcg 33035522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 21912586 - 21912525
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||| ||||||||||| ||||| ||||| ||| ||||||||||||||||  |||||||||||    
T  21912586 ggatcaggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatc 21912525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 9130899 - 9130958
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||||| ||||| ||||| |||||||||||||| |||||| ||||| ||||    
T  9130899 ggattaggcaagtgtatcaaattgtttatcaagtaataaagtg-taagtatagtattgtat 9130958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 10648571 - 10648627
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 251  Q
    |||||||| |||  || |||||||||||||||||||||||||||||| || ||||||    
T  10648571 ggattaggaaagcatatcaaatcgtttaccaagtaataaagtgataaatagagtatc 10648627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 258
Target Start/End: Original strand, 18466001 - 18466061
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||  ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||    
T  18466001 ttaggcaaggataccaaatcatttatcaaataataaagtgataagtagagtaacgtatcca 18466061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 17077121 - 17077184
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| ||| |||||||||| ||||| ||| ||||||||||||| ||| ||||| |||||||    
T  17077121 ggattagacaaatgtaccaaattgtttatcaaataataaagtgataggtagagtattgtatcca 17077184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 18467474 - 18467509
Alignment:
Q  225 aagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||| |||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccaca 18467509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 222 - 260
Target Start/End: Original strand, 8877441 - 8877479
Alignment:
Q  222 accaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccaca 8877479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 17151856 - 17151799
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 253  Q
    ||||||||||||||||||||||| | ||||||  |||||| ||||||||| ||||||||    
T  17151856 ggattaggcaagtgtaccaaatcatataccaa-aaataaattgataagtagagtatcgt 17151799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 17160033 - 17160095
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||| |||||||| |||||||||||| | | || ||||||||||||| ||||| |||||    
T  17160033 tggattagacaagtgtatcaaatcgtttactacgaaacaaagtgataagtagagtattgtatc 17160095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 39273263 - 39273221
Alignment:
Q  213 aaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||| |||||| |||||||||||||||||||| ||||||||||    
T  39273263 aaattgtttactaagtaataaagtgataagtagagtatcgtat 39273221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 22339418 - 22339355
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaata---aagtgataagtaaagtatcgtatcc 257  Q
    ||||| ||| ||||||||||| |||| |||||||||   |||||||||||||||||||| ||||    
T  22339418 attagacaaatgtaccaaatcatttatcaagtaatattaaagtgataagtaaagtatcgcatcc 22339355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 1882361 - 1882425
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||  |||||||||||| |||||||| | |||||| ||  |||| |||||||    
T  1882361 tggattaggcaagtgtgacaaatcgtttactaagtaatacaatgataactagggtattgtatcca 1882425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 258
Target Start/End: Complemental strand, 4258988 - 4258929
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||| |||||||| ||||||||||||||| ||||||| || ||| || |||||||||||||    
T  4258988 ttagacaagtgtaacaaatcgtttaccaaataataaaatg-taactagagtatcgtatcca 4258929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 21102374 - 21102334
Alignment:
Q  220 ttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||| ||||| |||| ||||    
T  21102374 ttaccaagtaataaagtgataagtagagtattgtattcaca 21102334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 25888326 - 25888261
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  25888326 ggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccaca 25888261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 29719337 - 29719272
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  29719337 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccaca 29719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 17743576 - 17743517
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17743576 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 17743517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 27909219 - 27909160
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 27909160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 196 - 255
Target Start/End: Original strand, 45553124 - 45553183
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  45553124 gattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtat 45553183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 15339231 - 15339296
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||    
T  15339231 ggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccaca 15339296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 32085456 - 32085521
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  32085456 ggattaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 32085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 20174740 - 20174676
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  20174740 gattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccaca 20174676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 8447152 - 8447091
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  8447152 ttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccaca 8447091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 8503173 - 8503111
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||| ||||||||    
T  8503173 ttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccaca 8503111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 25196010 - 25196070
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  25196010 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtatcatatccacagg 25196070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 26603456 - 26603396
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||||||||    
T  26603456 ggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtat 26603396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 31805004 - 31804940
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||||    
T  31805004 attaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacag 31804940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 28770548 - 28770481
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaggt 263  Q
    ||||| ||| |||||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||    
T  28770548 gattaagcacgtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatccataggt 28770481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 11382867 - 11382794
Alignment:
Q  187 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||  |||||||| ||||||||||||||  ||||||||||||||||| |||||| ||||||||    
T  11382867 tgatgtgtggattaaacaagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccaca 11382794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 25618550 - 25618614
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  25618550 ggattaggcaagcgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 25618614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 256
Target Start/End: Complemental strand, 45621987 - 45621926
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||| | |||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  45621987 ggattaagaaagtgtacaaaatcgtttaccaagtaataaagtgagaagtagagtatcgtatc 45621926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 12953399 - 12953335
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| |||| ||||||||||||| ||||||| ||||| || ||||||    
T  12953399 gattaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccaca 12953335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 17349352 - 17349414
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||| |||||||||||||||    
T  17349352 gattaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 17349414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 262
Target Start/End: Original strand, 30411679 - 30411738
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||| ||||| ||||||| |||||||||||||||||| ||||||||||| |||||    
T  30411679 caagtgtacgaaatcttttaccatgtaataaagtgataagtagagtatcgtatcaacagg 30411738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 12557811 - 12557750
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| | ||||| |||||||    
T  12557811 ttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccaca 12557750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 19200237 - 19200176
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||  |||||||||||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccaca 19200176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 32440095 - 32440039
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||||||||| |||||||||| ||||||||| ||| |||||||||||||||||    
T  32440095 gcaagtgtaccaaattgtttaccaagaaataaagtg-taaataaagtatcgtatccac 32440039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 25530445 - 25530507
Alignment:
Q  201 ggcaagtgtaccaaatcgtttac--caagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| |||||| |  ||||||||||||||||||||| |||||||||||||||||    
T  25530445 ggcaagtgtaccaa-tcgttttcatcaagtaataaagtgataagtagagtatcgtatccacagg 25530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 25885563 - 25885501
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| | ||||||||||||||||| ||||||| |||||||||| | |||||||||||||||    
T  25885563 attaggcgattgtaccaaatcgtttacaaagtaat-aagtgataagaatagtatcgtatccaca 25885501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 262
Target Start/End: Original strand, 25535296 - 25535334
Alignment:
Q  224 caagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagg 25535334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 260
Target Start/End: Complemental strand, 23011864 - 23011804
Alignment:
Q  199 taggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||  ||||||||||||||||||| |||||| | ||| |||||||||    
T  23011864 taggcaagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccaca 23011804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 25939161 - 25939213
Alignment:
Q  205 agtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||| ||| |||| |||||||||||||| ||||||||||||||||||||    
T  25939161 agtgtaccacatcatttatcaagtaataaagtg-taagtaaagtatcgtatcca 25939213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 17635875 - 17635815
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    ||||| |||| |||||||||||||||||||||||| || ||||| || ||| |||||||||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacag 17635815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 20173403 - 20173348
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 251  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||| | ||||||    
T  20173403 ggattaggaaagtgtaccaaatcg-ttaccaagttataaagtgataagcagagtatc 20173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 30900950 - 30900886
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||||   ||||||||| ||||||||| |||||||||||||| || ||||| ||||||||    
T  30900950 ggattaggcataggtaccaaattgtttaccaaataataaagtgataactagagtattgtatccac 30900886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 13776334 - 13776396
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| |||||||| |||||||||||  || ||||||||||||||||  |||||||||||||||    
T  13776334 attagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccaca 13776396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 27418350 - 27418389
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaa 234  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  27418350 ggattaggcaaatgtaccaaatcgtttacaaagtaataaa 27418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 244
Target Start/End: Original strand, 28925521 - 28925563
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 244  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  28925521 ggcaagtgtactaaatcgtt-accaagtaataaagtgataagta 28925563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 252
Target Start/End: Original strand, 5777211 - 5777266
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 252  Q
    ||||||||||||||| || |||||||| ||| |||||||||  ||||||||||||||    
T  5777211 gattaggcaagtgtatcatatcgtttatcaaataataaagt-ttaagtaaagtatcg 5777266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 5792823 - 5792882
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||||||||||||| ||||||||||||  ||||||||| ||| ||||||  ||||||||||    
T  5792823 gattaggcaagtgtgccaaatcgtttattaagtaataacgtg-taagtatggtatcgtatc 5792882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 261
Target Start/End: Complemental strand, 17675730 - 17675670
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    ||||| |||| |||||||||||||||||||||||| || ||||| || ||| |||| ||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacag 17675670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 21449082 - 21449147
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21449082 ggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccaca 21449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 24306411 - 24306344
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24306411 ggatttggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg 24306344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 25405730 - 25405671
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 25405671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 15544066 - 15544008
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccac 15544008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 23038118 - 23038053
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  23038118 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccaca 23038053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 13345450 - 13345377
Alignment:
Q  187 tgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  13345450 tgatgtgtggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccaca 13345377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 9787985 - 9787922
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||    
T  9787985 ggattaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatcca 9787922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 17359155 - 17359218
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||    
T  17359155 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatcca 17359218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 22664201 - 22664263
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  22664201 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccac 22664263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 26540892 - 26540953
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  26540892 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 26540953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 3591759 - 3591694
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||||||||    
T  3591759 ggattaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccaca 3591694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 17610354 - 17610297
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccaca 17610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 17837510 - 17837575
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||||||||    
T  17837510 ggattaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccaca 17837575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 18736340 - 18736279
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagg 18736279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 27117824 - 27117759
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  27117824 ggattaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcaca 27117759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 18825655 - 18825713
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccaca 18825713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 24281272 - 24281335
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| | |||| ||||||||    
T  24281272 attaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccaca 24281335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 197 - 252
Target Start/End: Complemental strand, 32383102 - 32383047
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcg 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  32383102 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatcg 32383047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 12012907 - 12012841
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||| ||||| |||||||||    
T  12012907 tggattaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccaca 12012841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 258
Target Start/End: Original strand, 29242518 - 29242575
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatcca 29242575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 16359865 - 16359928
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||| ||||| |||||||||    
T  16359865 gattaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccaca 16359928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 21988082 - 21988026
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcc 21988026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 12208600 - 12208659
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||| ||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccaca 12208659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 21847629 - 21847691
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||    
T  21847629 attaggcaagtgtaccaaatcgtttaccaagtaataaagt-ctaagtagagtattgtatccaca 21847691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 14779564 - 14779625
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||||| ||||||||||||||| ||||||| || |||||| ||||||||||    
T  14779564 ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagg 14779625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 15813260 - 15813196
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||  | |||||||||||||    
T  15813260 ggattaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccaca 15813196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 16179010 - 16179063
Alignment:
Q  205 agtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||| ||||||||||| ||||||||| |||||||||||||    
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatcca 16179063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 16787832 - 16787767
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| | | ||||||||||| ||||||||||||||||||||| |||||||||| ||||    
T  16787832 ggattaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcaca 16787767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 51473978 - 51473919
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||| || ||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  51473978 attaggaaaatgtaccaaatcgtttacc--gtaataaagtgataagtagagtatcgtatcca 51473919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 33190670 - 33190735
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| || ||||||||||||||||| ||||||||||| ||||||||| |||||  ||||||||    
T  33190670 ggattagacaggtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccaca 33190735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 15813641 - 15813565
Alignment:
Q  185 aatgatgtatggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgat-aagtaaagtatcgtatccaca 260  Q
    ||||||||  ||||||| |||||||||||||||||||| |||  ||||||||||| ||||| ||||| |||||||||    
T  15813641 aatgatgtgcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccaca 15813565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 21334819 - 21334763
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||| ||||||||||||    
T  21334819 ggcaaatgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatcc 21334763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 21666693 - 21666649
Alignment:
Q  216 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  21666693 tcgttaaccaagtaataaagtgataagtagagtatcgtatccaca 21666649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 22620254 - 22620318
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||| |||||  ||||  ||||||||||||||||| || |||||||||||||    
T  22620254 tggattaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatcca 22620318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 26649075 - 26649012
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||| || ||| |||||||||    
T  26649075 gattagacaagtgtatcaaatcgtttaccaagtaataaaatgataagtgaa-tattgtatccaca 26649012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 24267888 - 24267825
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| |||||||| |||||| |||| ||||||||||| ||||||||| |||||| ||||||    
T  24267888 ggattagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatcca 24267825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 34480964 - 34481011
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 244  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||||    
T  34480964 attagacaaatgtacaaaatcgtttaccaagtaataaagtgataagta 34481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 16069650 - 16069590
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| | ||| ||||||||||||||||||||||||| |||| ||| ||||||    
T  16069650 ggcaagtgtaccaatt-gttaaccaagtaataaagtgataagtaaaatatcatatacacagg 16069590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 44795362 - 44795426
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| |||||||||| || | ||||||||||||||||| |||||||  |||||||||||||||    
T  44795362 ggattagacaagtgtaccgaagcatttaccaagtaataaagagataagt-gagtatcgtatccaca 44795426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 147625 - 147689
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| |||||||| ||||||||||  ||||||||||||||||||||  |||||| ||| ||||    
T  147625 gattagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcaca 147689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 9401501 - 9401563
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| ||||||||||| |||||||| |||||||||   |||||| |||||||||||||||    
T  9401501 tggattaggca-gtgtaccaaatagtttaccaggtaataaag---taagtagagtatcgtatccaca 9401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 260
Target Start/End: Original strand, 24214558 - 24214602
Alignment:
Q  216 tcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||| ||||  |||||||||    
T  24214558 tcgtttaccaagtaataaagtgataagtacagtactgtatccaca 24214602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 31236158 - 31236107
Alignment:
Q  193 atggattaggcaa--gtgtaccaaatcgtttaccaagtaataaagtgataag 242  Q
    |||||||||||||  ||||||| |||||||||| ||||||||||||||||||    
T  31236158 atggattaggcaaaagtgtaccgaatcgtttactaagtaataaagtgataag 31236107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 234
Target Start/End: Complemental strand, 10064668 - 10064637
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaa 234  Q
    ||||||||||||||||||||||||||||||||    
T  10064668 caagtgtaccaaatcgtttaccaagtaataaa 10064637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 241
Target Start/End: Original strand, 33712660 - 33712702
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    |||||||||||||||||||| |||||||| ||||||||||||||    
T  33712660 ttaggcaagtgtaccaaatc-tttaccaaataataaagtgataa 33712702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 17121584 - 17121523
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||| |||||||| ||||| ||||| |||||||||||||| |||||| |||||| ||||||    
T  17121584 gattagacaagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatcca 17121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 203 - 257
Target Start/End: Original strand, 22622892 - 22622945
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    |||||||||||| ||||| |||||||||||||||||| |||| |||||| |||||    
T  22622892 caagtgtaccaa-tcgttgaccaagtaataaagtgattagtagagtatcatatcc 22622945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 28008100 - 28008158
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||| ||| |||| |||||||||||| |||||||||||| ||||| | ||||||||||    
T  28008100 attagacaaatgtatcaaatcgtttactaagtaataaagttataagaatagtatcgtat 28008158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 18830481 - 18830541
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| | ||| ||||||||| |||||||||  |||| |||||||||||||||    
T  18830481 ggcaagtgtaccaa-tggttgaccaagtaacaaagtgatacttaaattatcgtatccacagg 18830541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 727489 - 727525
Alignment:
Q  224 caagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccaca 727525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 56; Significance: 3e-23; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 54853 - 54920
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  54853 ggattaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagg 54920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 48290 - 48235
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 234362 - 234400
Alignment:
Q  223 ccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    |||||||||||||||||||||| ||||||||| ||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacag 234400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 25550609 - 25550543
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  25550609 gattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagg 25550543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 15469929 - 15469994
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||    
T  15469929 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccaca 15469994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 24267058 - 24266996
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24267058 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 24266996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 24343689 - 24343627
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24343689 attaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccaca 24343627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 18208354 - 18208290
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||    
T  18208354 ggattaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccaca 18208290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 19004326 - 19004267
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccaca 19004267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 24852279 - 24852213
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| ||| |||||| ||||||||||||||| ||||||||| |||||||||||||||    
T  24852279 tggattaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccaca 24852213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 15375982 - 15375921
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||    
T  15375982 ggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagg 15375921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 15690770 - 15690834
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    ||||||||| |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  15690770 tggattaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccac 15690834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 17171659 - 17171594
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||||||| || ||||||||||||    
T  17171659 ggattaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccaca 17171594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 19086285 - 19086220
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  19086285 ggattagataagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccaca 19086220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 23380360 - 23380303
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  23380360 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtat 23380303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 18937741 - 18937800
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  18937741 ggattaggcaagtgtaccaaatcgtttattaagtaataaagtgataagt-aagtatcgtat 18937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 201 - 260
Target Start/End: Complemental strand, 20315529 - 20315471
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||    
T  20315529 ggcaagtgtaccaa-tcgtttaccaagtaataatgtgataagtagagtatcgtatccaca 20315471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 22755514 - 22755577
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||| |||||||||| |||||||||||||||||| ||| |||||||| |||||||||||||    
T  22755514 ggattagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatcca 22755577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 26121429 - 26121363
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||||||||||| ||||||||||| || |||||| ||||| |||||||||||    
T  26121429 ggattaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagg 26121363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 17431884 - 17431942
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacag 261  Q
    ||||||||| |||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacag 17431942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Original strand, 24140442 - 24140499
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccac 259  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||    
T  24140442 ggcaagtgtaccaa-tcgtttaccaagtaataaagtgataagtagagtattgtatccac 24140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 19283961 - 19283896
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||| ||||| || |||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  19283961 ggattaggaaagtgcactaaatcgtttaccaaataataaagtgataagtagagtattgtatccaca 19283896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 197 - 262
Target Start/End: Complemental strand, 25402441 - 25402376
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||||| |||| ||||||||  |||||||||||| ||||| |||||||||||    
T  25402441 attaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagg 25402376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 34128636 - 34128696
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| | |||||||||||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacagg 34128696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 17185459 - 17185523
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||| ||||||||| ||||| |||||||| ||||||||||||||||| ||||||||||| |||||    
T  17185459 ttagacaagtgtactaaatcatttaccaaataataaagtgataagtagagtatcgtatctacagg 17185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 241
Target Start/End: Original strand, 20419951 - 20419995
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    |||||| ||||||||||||||||||||||||||||||||||||||    
T  20419951 attaggtaagtgtaccaaatcgtttaccaagtaataaagtgataa 20419995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 19051542 - 19051604
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcc 257  Q
    |||||||  |||||||||||||||||||| |||||||||||||||||||  ||| ||||||||    
T  19051542 ggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc 19051604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 15544047 - 15544103
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||||||||||||||||||||||||||||||| || | |||| ||||||||||    
T  15544047 ttaggcaagtgtaccaaatcgtttaccaagtaataaactg-tcagtagagtatcgtat 15544103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 17315182 - 17315141
Alignment:
Q  219 tttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  17315182 tttatcaagtaataaagtgataagtaaagtatcgtatccaca 17315141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 23388935 - 23388879
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||    
T  23388935 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccaca 23388879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 24245642 - 24245585
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||  ||||||| |||||| |||||||||||||||||| |||||||||||||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccaca 24245585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 24662256 - 24662212
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgat 239  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||    
T  24662256 ggattaggtaagtgtaccaaatcgtttatcaagtaataaagtgat 24662212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 28253281 - 28253340
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||| ||||||||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  28253281 gcaaatgtaccaaatcgtttaccaagtaataaagtg-taagtagaatatcgtattcacagg 28253340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 240
Target Start/End: Complemental strand, 20744911 - 20744872
Alignment:
Q  201 ggcaagtgtaccaaatcgtttaccaagtaataaagtgata 240  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  20744911 ggcaagtgtaccaaatcatttaccaagtaataaagtgata 20744872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 26110567 - 26110501
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||||||||||||| ||||||||| ||||||||||| || |||||| |||||  ||||||||||    
T  26110567 ggattaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagg 26110501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 36175135 - 36175189
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||||||||||||||||||||| |  ||| |||||||||||||    
T  36175135 caagtgtaccaaatcgtttaccaagtaataaagtg-tttgtagagtatcgtatcca 36175189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 17769494 - 17769461
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaag 235  Q
    ||||||||||||||||||||||||||||||||||    
T  17769494 gcaagtgtaccaaatcgtttaccaagtaataaag 17769461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 39434464 - 39434520
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| ||||||||||||||||||| ||||||||| |  ||||||||||||    
T  39434464 caagtgtaccaa-tcgtttaccaagtaataaattgataagtagaaaatcgtatccaca 39434520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 24167690 - 24167634
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatc 251  Q
    |||||||| |||||||  ||||||||||||||||||||||||  |||||| ||||||    
T  24167690 ggattaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatc 24167634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 250
Target Start/End: Complemental strand, 32417458 - 32417407
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtat 250  Q
    ||||| ||||||||||||||||||| |||||||||||||| |||||| |||||    
T  32417458 ttaggtaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtat 32417407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 34487640 - 34487695
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||| |||||||||||||||||||| |||||| | |||| ||||||||    
T  34487640 aagtgtaccaaattgtttaccaagtaataaagtg-taagtagaatatcatatccaca 34487695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 20534141 - 20534099
Alignment:
Q  212 caaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  20534141 caaatcttttaccaagtaataaagtg-taagtaaagtatcgtat 20534099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 26307600 - 26307660
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||| |||||  ||||||||||||  ||||||  ||||||||||||||    
T  26307600 ttaggcaagtgtaccaaattgtttattaagtaataaagt--taagtatcgtatcgtatccaca 26307660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 9521009 - 9521066
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||||||||||||||||||||||  |||||||| ||| | |||||||||||| ||||    
T  9521009 attaggcaagtgtaccaaatcgtttgtcaagtaat-aaggggtaagtaaagtatggtat 9521066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 26313713 - 26313777
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||| ||||||| |||||  |||||||| ||||||| | ||||||||||| || ||||||||    
T  26313713 gattaggaaagtgtatcaaattatttaccaattaataaaataataagtaaagtgtcttatccaca 26313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 722 - 782
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  722 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatc 782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 6282 - 6345
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  6282 attaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccaca 6345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 69911 - 69971
Alignment:
Q  200 aggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacaca 69971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0672 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 1727 - 1794
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    |||||||| ||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  1727 ggattaggtaagtgtaccaaactgtttaccaagtaaaaaagtgataagtagagtatcgtatccacagg 1794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 2371 - 2428
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccaca 2428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 2402 - 2459
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccaca 2459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 15571 - 15506
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||| |||||| |||||||||||||||||| ||| ||| |||||||||||||||    
T  15571 ggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccaca 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 258
Target Start/End: Original strand, 78589 - 78650
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||    
T  78589 attaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatcca 78650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 39577 - 39642
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||||| || ||||||||||||    
T  39577 ggattaggcaagtgtacaaaattatttaccaagtaataaagtgataagtagagcatcgtatccaca 39642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 12105 - 12162
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  12105 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtat 12162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 3533 - 3589
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||    
T  3533 caagtgtaccaatt-gttaaccaagtaataaagtgataagtagagtatcgtatccaca 3589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0957 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 3146 - 3210
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||| |||| |||||||||||||||||||| || ||| |||||||||||||||    
T  3146 ggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccaca 3210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 69075 - 69139
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||  || ||||||||||||    
T  69075 ggattaggcaagtgtaccaaatcatt-accaagtaataaagtgataagttgagaatcgtatccaca 69139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 81479 - 81529
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagta 244  Q
    |||||||||||||| ||| |||||||||||||| |||||||||||||||||    
T  81479 tggattaggcaagtttacgaaatcgtttaccaaataataaagtgataagta 81529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 260
Target Start/End: Complemental strand, 36099 - 36036
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||| ||| |||| ||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  36099 attaggaaagcgtactaaatcatttactaagtaataaagtgataagtagagtatcgtatccaca 36036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Complemental strand, 4590 - 4524
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||| |||||| ||||||||||||||||| ||| || |||| | |||||||||||||||    
T  4590 tggattaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccaca 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 919 - 866
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  919 aagtgtactaaatcgtt-accaagtaataaagtgataagtagagtatcgtatcca 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 51116 - 51162
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataa 241  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  51116 ggattaggcaagtgaaccaaattgtttaccaagtaataaagtgataa 51162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 29909 - 29962
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatcca 258  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||| |||||||    
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatcca 29962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 260
Target Start/End: Original strand, 19104 - 19168
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||| |||| | |||||||||| ||||||||||| |||||||| ||||    
T  19104 ggattaggcaagtgtaccaaattgttttc-aagtaataaaatgataagtaaattatcgtatgcaca 19168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 488 - 428
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||| || ||||||||| |||||||||||||||| ||| ||||||||||| |||||    
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagg 428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 21277 - 21336
Alignment:
Q  202 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacagg 262  Q
    ||||||||||||| ||||| || |||||||||||||||||||| |||||| ||||||||||    
T  21277 gcaagtgtaccaa-tcgttaacaaagtaataaagtgataagtagagtatcatatccacagg 21336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 72065 - 72125
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    ||||| || ||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||    
T  72065 ggatttggtaagtgtaccaaattgttaaccaagtaataaagtgataagtagagtatggtat 72125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 89957 - 89899
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    ||||| |||||||| |||||||||||||||||||||||||| |||||| |||||| ||||    
T  89957 attagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatc 89899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 18852 - 18793
Alignment:
Q  194 tggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 253  Q
    |||||||||||||||||||||||  |||| ||||||||||| | ||||||| ||||||||    
T  18852 tggattaggcaagtgtaccaaattatttatcaagtaataaaatcataagtagagtatcgt 18793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 223135 - 223078
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgt 253  Q
    |||||||||||||| ||||||  |||| ||||||||||| | ||||||| ||||||||    
T  223135 gattaggcaagtgtgccaaattatttatcaagtaataaaatcataagtagagtatcgt 223078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 7516 - 7458
Alignment:
Q  197 attaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtat 255  Q
    |||||| || ||||| |||||||||| ||||||||||||||||||||| ||||| ||||    
T  7516 attaggaaaatgtactaaatcgtttatcaagtaataaagtgataagtagagtattgtat 7458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 260
Target Start/End: Complemental strand, 181803 - 181747
Alignment:
Q  203 caagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||  |||||||||||||||||||||| |  |||||||||||||||    
T  181803 caagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccaca 181747  T

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Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 11236 - 11294
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatc 256  Q
    |||| ||||||||| |||| ||||| ||| ||||||||||||||||| |||||| ||||    
T  11236 ttagacaagtgtactaaattgtttatcaaataataaagtgataagtagagtatcatatc 11294  T

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Target: scaffold0620 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 7697 - 7661
Alignment:
Q  204 aagtgtaccaaatcgtttaccaagtaataaagtgata 240  Q
    ||||||| |||||||||||||||||||||||||||||    
T  7697 aagtgtatcaaatcgtttaccaagtaataaagtgata 7661  T

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Target: scaffold0102 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 35531 - 35595
Alignment:
Q  196 gattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    ||||| |||| |||| | ||||||||| |||||||||||||||||| || ||||| |||||||||    
T  35531 gattatgcaaatgtatctaatcgtttatcaagtaataaagtgataaatagagtattgtatccaca 35595  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 43304 - 43268
Alignment:
Q  224 caagtaataaagtgataagtaaagtatcgtatccaca 260  Q
    |||||||||||||||||||||||||| ||||||||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccaca 43268  T

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Target: scaffold0394 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 14010 - 13971
Alignment:
Q  198 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg 237  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  14010 ttaggcaagtgtatcaaatcgtttaccaagtaattaagtg 13971  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 37464 - 37419
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgata 240  Q
    ||||||| ||| ||||| |||| |||||||||||||||||||||||    
T  37464 ggattagacaaatgtactaaattgtttaccaagtaataaagtgata 37419  T

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Target: scaffold0427 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 223
Target Start/End: Complemental strand, 2913 - 2885
Alignment:
Q  195 ggattaggcaagtgtaccaaatcgtttac 223  Q
    |||||||||||||||||||||||||||||    
T  2913 ggattaggcaagtgtaccaaatcgtttac 2885  T

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