View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11056_low_2 (Length: 403)

Name: NF11056_low_2
Description: NF11056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11056_low_2
NF11056_low_2
[»] chr7 (52 HSPs)
chr7 (15-349)||(21826034-21826368)
chr7 (45-161)||(26733253-26733369)
chr7 (51-166)||(22602710-22602825)
chr7 (51-166)||(1433398-1433513)
chr7 (52-139)||(19206021-19206108)
chr7 (51-166)||(26329382-26329497)
chr7 (53-135)||(15902797-15902879)
chr7 (79-165)||(35861903-35861995)
chr7 (52-164)||(11061077-11061189)
chr7 (51-143)||(27945008-27945100)
chr7 (51-166)||(30730981-30731094)
chr7 (51-156)||(24339596-24339701)
chr7 (45-166)||(25481846-25481967)
chr7 (51-126)||(9408334-9408409)
chr7 (45-166)||(18213027-18213149)
chr7 (51-168)||(5409836-5409953)
chr7 (52-117)||(11665441-11665506)
chr7 (58-135)||(22868017-22868094)
chr7 (51-143)||(32094020-32094113)
chr7 (51-143)||(7328691-7328783)
chr7 (46-130)||(20549771-20549855)
chr7 (52-131)||(22484004-22484083)
chr7 (51-125)||(6630912-6630986)
chr7 (51-166)||(9778452-9778559)
chr7 (57-143)||(43249960-43250046)
chr7 (54-135)||(2425736-2425817)
chr7 (45-102)||(3721101-3721158)
chr7 (51-112)||(3991322-3991383)
chr7 (52-125)||(5835232-5835305)
chr7 (51-164)||(21140982-21141095)
chr7 (51-124)||(32308106-32308179)
chr7 (79-151)||(6028584-6028656)
chr7 (52-132)||(7438684-7438764)
chr7 (55-150)||(4008568-4008663)
chr7 (55-150)||(4013960-4014055)
chr7 (79-130)||(18215214-18215265)
chr7 (79-137)||(5307233-5307291)
chr7 (79-165)||(29763202-29763288)
chr7 (45-123)||(41020483-41020561)
chr7 (51-164)||(1885519-1885632)
chr7 (53-126)||(5233613-5233686)
chr7 (51-100)||(9482944-9482993)
chr7 (79-132)||(10042915-10042968)
chr7 (74-135)||(11722121-11722182)
chr7 (130-167)||(11890985-11891022)
chr7 (87-148)||(13557780-13557841)
chr7 (86-135)||(24105653-24105702)
chr7 (68-129)||(29787386-29787447)
chr7 (51-104)||(35297672-35297725)
chr7 (46-90)||(18226964-18227008)
chr7 (53-117)||(23128663-23128727)
chr7 (79-135)||(43027497-43027553)
[»] chr6 (70 HSPs)
chr6 (51-166)||(9107370-9107485)
chr6 (45-166)||(8776967-8777088)
chr6 (52-166)||(7938060-7938174)
chr6 (51-165)||(16766642-16766756)
chr6 (51-166)||(9027122-9027237)
chr6 (68-166)||(1681702-1681800)
chr6 (45-143)||(34595101-34595199)
chr6 (45-166)||(426508-426629)
chr6 (51-143)||(8365519-8365611)
chr6 (45-168)||(5732504-5732627)
chr6 (53-135)||(16833283-16833365)
chr6 (46-167)||(7977825-7977946)
chr6 (51-123)||(7801156-7801228)
chr6 (53-137)||(9658852-9658936)
chr6 (51-135)||(10770674-10770758)
chr6 (52-124)||(19044450-19044522)
chr6 (47-130)||(20371106-20371189)
chr6 (53-139)||(7086766-7086852)
chr6 (46-124)||(7265588-7265666)
chr6 (79-143)||(853887-853951)
chr6 (114-166)||(2386764-2386816)
chr6 (46-102)||(12627572-12627628)
chr6 (51-135)||(12696299-12696383)
chr6 (51-167)||(18367780-18367895)
chr6 (45-117)||(19040345-19040417)
chr6 (100-164)||(24353122-24353186)
chr6 (45-117)||(33001283-33001355)
chr6 (51-166)||(34290079-34290192)
chr6 (50-124)||(7027227-7027302)
chr6 (51-102)||(9025494-9025545)
chr6 (51-166)||(9629328-9629442)
chr6 (51-166)||(10294051-10294166)
chr6 (52-147)||(11784217-11784312)
chr6 (58-133)||(17341671-17341746)
chr6 (51-166)||(24115847-24115962)
chr6 (57-151)||(6389702-6389796)
chr6 (79-124)||(7930291-7930336)
chr6 (53-141)||(8805576-8805662)
chr6 (53-166)||(9522835-9522948)
chr6 (52-165)||(15489733-15489845)
chr6 (45-130)||(17841583-17841668)
chr6 (73-165)||(10339148-10339240)
chr6 (57-117)||(10842525-10842585)
chr6 (51-134)||(3398595-3398677)
chr6 (79-162)||(4118361-4118444)
chr6 (68-166)||(5970125-5970217)
chr6 (51-102)||(7151420-7151471)
chr6 (51-102)||(9617442-9617493)
chr6 (79-166)||(25096367-25096454)
chr6 (45-103)||(31579221-31579277)
chr6 (79-129)||(677818-677868)
chr6 (82-124)||(12868706-12868748)
chr6 (52-134)||(13851712-13851794)
chr6 (51-117)||(26562682-26562748)
chr6 (81-143)||(33303626-33303688)
chr6 (45-98)||(7377991-7378044)
chr6 (51-124)||(7996378-7996451)
chr6 (51-124)||(8022350-8022423)
chr6 (52-117)||(13360373-13360438)
chr6 (51-132)||(20518323-20518404)
chr6 (46-115)||(21924930-21924999)
chr6 (53-102)||(26178683-26178732)
chr6 (45-130)||(28152079-28152163)
chr6 (45-102)||(28715303-28715360)
chr6 (51-143)||(34447360-34447450)
chr6 (79-166)||(3209326-3209413)
chr6 (86-166)||(7625066-7625146)
chr6 (108-160)||(31673543-31673595)
chr6 (119-175)||(33283263-33283319)
chr6 (51-135)||(34073347-34073431)
[»] chr8 (47 HSPs)
chr8 (53-166)||(29510306-29510419)
chr8 (51-143)||(11944632-11944724)
chr8 (51-166)||(22651920-22652035)
chr8 (57-166)||(44067460-44067569)
chr8 (51-143)||(11927086-11927178)
chr8 (51-124)||(4786338-4786411)
chr8 (79-135)||(4298914-4298970)
chr8 (51-151)||(13436964-13437064)
chr8 (79-167)||(22197770-22197858)
chr8 (58-166)||(24362209-24362317)
chr8 (53-168)||(37283814-37283927)
chr8 (51-165)||(926788-926902)
chr8 (51-124)||(15816129-15816202)
chr8 (47-135)||(24669408-24669496)
chr8 (51-166)||(2572056-2572171)
chr8 (45-135)||(20873044-20873134)
chr8 (45-166)||(24413553-24413675)
chr8 (59-141)||(36934639-36934721)
chr8 (84-165)||(4673458-4673538)
chr8 (45-130)||(36450748-36450833)
chr8 (46-117)||(13844591-13844662)
chr8 (67-165)||(24857954-24858055)
chr8 (51-130)||(31109518-31109597)
chr8 (51-133)||(18170482-18170564)
chr8 (51-133)||(18634050-18634132)
chr8 (52-134)||(28384995-28385077)
chr8 (45-102)||(4948660-4948717)
chr8 (45-102)||(14134707-14134764)
chr8 (54-135)||(25192350-25192431)
chr8 (53-137)||(3677759-3677843)
chr8 (45-117)||(31236571-31236643)
chr8 (46-102)||(34897093-34897149)
chr8 (53-136)||(13018255-13018338)
chr8 (51-102)||(25566849-25566900)
chr8 (79-141)||(949292-949354)
chr8 (120-166)||(3951598-3951644)
chr8 (53-115)||(7658458-7658520)
chr8 (45-103)||(33405378-33405436)
chr8 (45-102)||(3025559-3025616)
chr8 (52-148)||(29357938-29358035)
chr8 (43-135)||(8343291-8343383)
chr8 (53-141)||(11803228-11803316)
chr8 (46-102)||(12985400-12985456)
chr8 (114-166)||(16642029-16642081)
chr8 (129-165)||(18116252-18116288)
chr8 (114-166)||(18964115-18964167)
chr8 (73-113)||(41831962-41832002)
[»] chr4 (43 HSPs)
chr4 (45-166)||(23292980-23293101)
chr4 (79-166)||(19482612-19482699)
chr4 (79-160)||(27706205-27706286)
chr4 (58-135)||(14126118-14126195)
chr4 (57-166)||(24343451-24343560)
chr4 (52-157)||(35157986-35158091)
chr4 (52-163)||(847898-848009)
chr4 (87-166)||(20633429-20633508)
chr4 (59-166)||(36635268-36635375)
chr4 (45-166)||(12895268-12895389)
chr4 (79-156)||(20521877-20521954)
chr4 (45-130)||(40179630-40179715)
chr4 (114-166)||(4157102-4157154)
chr4 (51-143)||(21945470-21945562)
chr4 (45-115)||(54580017-54580087)
chr4 (61-166)||(903866-903971)
chr4 (94-166)||(12708090-12708162)
chr4 (51-166)||(15029715-15029824)
chr4 (45-117)||(36409506-36409577)
chr4 (45-117)||(36423672-36423743)
chr4 (52-111)||(5775359-5775418)
chr4 (51-166)||(40742536-40742650)
chr4 (45-132)||(12797332-12797418)
chr4 (68-135)||(40481612-40481678)
chr4 (45-135)||(49431000-49431091)
chr4 (52-166)||(11931224-11931338)
chr4 (120-166)||(37203222-37203268)
chr4 (53-130)||(6485613-6485690)
chr4 (45-102)||(8423712-8423769)
chr4 (52-101)||(9996849-9996898)
chr4 (60-137)||(22440609-22440686)
chr4 (79-143)||(28084488-28084553)
chr4 (45-102)||(28964242-28964299)
chr4 (53-102)||(29205452-29205501)
chr4 (56-117)||(40613443-40613504)
chr4 (45-166)||(2361969-2362092)
chr4 (51-135)||(3947766-3947850)
chr4 (83-135)||(12628617-12628669)
chr4 (59-123)||(20743286-20743350)
chr4 (45-101)||(30103351-30103406)
chr4 (51-130)||(30298926-30299006)
chr4 (51-130)||(30327794-30327874)
chr4 (58-166)||(44081584-44081692)
[»] chr3 (64 HSPs)
chr3 (44-165)||(16000009-16000130)
chr3 (51-167)||(15796294-15796410)
chr3 (46-142)||(25093470-25093566)
chr3 (80-166)||(10335315-10335401)
chr3 (57-166)||(24205047-24205156)
chr3 (79-166)||(750646-750734)
chr3 (43-151)||(8383216-8383324)
chr3 (45-123)||(10954939-10955017)
chr3 (68-166)||(35994755-35994852)
chr3 (45-143)||(55401042-55401140)
chr3 (73-166)||(3164047-3164140)
chr3 (68-141)||(3610602-3610675)
chr3 (45-102)||(7928458-7928515)
chr3 (57-166)||(34307786-34307895)
chr3 (51-143)||(28917968-28918060)
chr3 (51-143)||(41961650-41961742)
chr3 (51-142)||(11665912-11666003)
chr3 (51-142)||(26290340-26290430)
chr3 (79-148)||(14829652-14829720)
chr3 (45-102)||(45451561-45451618)
chr3 (51-143)||(8587021-8587113)
chr3 (73-141)||(25652053-25652121)
chr3 (45-112)||(7614409-7614476)
chr3 (79-166)||(10268514-10268601)
chr3 (51-166)||(10455734-10455849)
chr3 (79-142)||(25064877-25064940)
chr3 (51-130)||(25948887-25948966)
chr3 (51-117)||(18426942-18427008)
chr3 (51-117)||(34910310-34910376)
chr3 (52-121)||(13807158-13807227)
chr3 (44-124)||(25775494-25775575)
chr3 (54-135)||(26508085-26508166)
chr3 (45-117)||(8789544-8789616)
chr3 (51-166)||(21479068-21479177)
chr3 (51-167)||(38731161-38731277)
chr3 (68-123)||(4987308-4987363)
chr3 (57-168)||(11658758-11658868)
chr3 (51-130)||(14209094-14209172)
chr3 (60-143)||(14618748-14618831)
chr3 (51-110)||(15314876-15314935)
chr3 (53-124)||(20503451-20503522)
chr3 (45-92)||(40993329-40993376)
chr3 (73-143)||(11610488-11610558)
chr3 (120-166)||(14027959-14028005)
chr3 (51-137)||(14216865-14216951)
chr3 (51-137)||(14222994-14223080)
chr3 (52-102)||(20691327-20691377)
chr3 (45-135)||(26492199-26492289)
chr3 (51-117)||(28812508-28812574)
chr3 (51-117)||(34185123-34185189)
chr3 (51-113)||(49651786-49651848)
chr3 (57-102)||(29508452-29508497)
chr3 (79-124)||(39756222-39756267)
chr3 (79-124)||(40052318-40052363)
chr3 (45-102)||(49505148-49505205)
chr3 (79-135)||(2620081-2620137)
chr3 (79-135)||(5441059-5441115)
chr3 (106-166)||(7171446-7171506)
chr3 (51-135)||(9800015-9800099)
chr3 (61-117)||(12704000-12704056)
chr3 (68-116)||(14979175-14979223)
chr3 (79-126)||(21305229-21305277)
chr3 (46-102)||(51206348-51206404)
chr3 (109-157)||(51512232-51512280)
[»] scaffold0027 (1 HSPs)
scaffold0027 (50-166)||(46626-46742)
[»] chr1 (70 HSPs)
chr1 (58-166)||(398772-398880)
chr1 (51-167)||(7918211-7918327)
chr1 (42-166)||(41877461-41877585)
chr1 (51-166)||(47989442-47989556)
chr1 (45-168)||(9709762-9709885)
chr1 (51-166)||(6612171-6612286)
chr1 (51-165)||(1486709-1486823)
chr1 (52-166)||(38503264-38503378)
chr1 (46-165)||(9103585-9103703)
chr1 (51-166)||(42359449-42359564)
chr1 (43-130)||(52903229-52903316)
chr1 (53-126)||(13997867-13997940)
chr1 (45-166)||(38078655-38078771)
chr1 (51-148)||(5944243-5944342)
chr1 (53-157)||(10572591-10572695)
chr1 (52-135)||(5898267-5898350)
chr1 (45-124)||(22881610-22881689)
chr1 (45-124)||(37598818-37598896)
chr1 (44-134)||(1864873-1864962)
chr1 (51-117)||(9828037-9828103)
chr1 (56-166)||(10577740-10577850)
chr1 (58-124)||(23622304-23622370)
chr1 (68-166)||(34298380-34298478)
chr1 (52-130)||(36878441-36878519)
chr1 (51-135)||(5376500-5376584)
chr1 (52-112)||(40258934-40258994)
chr1 (51-142)||(20157350-20157441)
chr1 (51-166)||(40285654-40285769)
chr1 (46-135)||(2288164-2288251)
chr1 (52-166)||(2896122-2896236)
chr1 (51-117)||(24577186-24577252)
chr1 (68-165)||(16297300-16297397)
chr1 (82-143)||(40917718-40917779)
chr1 (51-100)||(44482240-44482289)
chr1 (45-130)||(46348377-46348462)
chr1 (52-124)||(1815243-1815315)
chr1 (51-135)||(6427325-6427409)
chr1 (44-124)||(13436444-13436524)
chr1 (51-115)||(25361881-25361945)
chr1 (46-102)||(40181879-40181935)
chr1 (79-166)||(609486-609573)
chr1 (53-132)||(17754289-17754368)
chr1 (57-124)||(17831537-17831604)
chr1 (46-101)||(18337338-18337393)
chr1 (51-102)||(38075970-38076021)
chr1 (88-143)||(48040499-48040554)
chr1 (51-117)||(113292-113358)
chr1 (79-149)||(15323124-15323194)
chr1 (52-134)||(16927186-16927268)
chr1 (51-165)||(31694710-31694824)
chr1 (52-165)||(6415002-6415110)
chr1 (68-109)||(9449025-9449066)
chr1 (45-102)||(14332636-14332693)
chr1 (73-130)||(16812523-16812580)
chr1 (68-166)||(18190125-18190215)
chr1 (73-166)||(21366042-21366135)
chr1 (45-102)||(22515881-22515938)
chr1 (46-143)||(39130762-39130859)
chr1 (79-143)||(5927368-5927432)
chr1 (79-135)||(14359550-14359605)
chr1 (44-135)||(19058849-19058941)
chr1 (45-117)||(21530682-21530754)
chr1 (46-90)||(30749860-30749904)
chr1 (46-90)||(30771311-30771355)
chr1 (46-102)||(30847715-30847771)
chr1 (79-127)||(32461491-32461539)
chr1 (51-95)||(34371728-34371772)
chr1 (106-166)||(41597525-41597585)
chr1 (79-135)||(48450615-48450671)
chr1 (106-166)||(48548017-48548077)
[»] chr2 (53 HSPs)
chr2 (54-168)||(28412292-28412404)
chr2 (45-142)||(15972841-15972938)
chr2 (50-166)||(30335361-30335477)
chr2 (51-166)||(34784982-34785097)
chr2 (46-132)||(18421941-18422027)
chr2 (51-164)||(23058442-23058556)
chr2 (45-135)||(30404844-30404934)
chr2 (52-165)||(18276466-18276579)
chr2 (59-164)||(21616708-21616813)
chr2 (68-168)||(21374716-21374811)
chr2 (51-158)||(15657816-15657923)
chr2 (45-143)||(19536391-19536490)
chr2 (51-132)||(36756344-36756425)
chr2 (46-137)||(20242722-20242813)
chr2 (51-129)||(12668423-12668501)
chr2 (81-166)||(26769461-26769540)
chr2 (79-169)||(31283989-31284079)
chr2 (45-102)||(5473336-5473393)
chr2 (51-135)||(21782820-21782902)
chr2 (45-130)||(37411238-37411323)
chr2 (42-148)||(31018552-31018658)
chr2 (52-166)||(40361755-40361869)
chr2 (46-146)||(896177-896275)
chr2 (45-102)||(5367200-5367257)
chr2 (57-134)||(10535765-10535842)
chr2 (68-137)||(12940952-12941021)
chr2 (43-143)||(21624233-21624334)
chr2 (54-135)||(23718001-23718082)
chr2 (54-135)||(24105673-24105754)
chr2 (79-164)||(34337204-34337289)
chr2 (45-102)||(34691799-34691856)
chr2 (45-102)||(34714211-34714268)
chr2 (51-165)||(44860273-44860379)
chr2 (45-168)||(2438713-2438833)
chr2 (45-137)||(20473295-20473387)
chr2 (51-135)||(20539674-20539758)
chr2 (51-115)||(28677904-28677967)
chr2 (58-134)||(35449489-35449565)
chr2 (52-135)||(18841014-18841097)
chr2 (45-124)||(31808063-31808142)
chr2 (51-130)||(37558957-37559036)
chr2 (68-130)||(16069271-16069333)
chr2 (52-102)||(18889592-18889642)
chr2 (52-137)||(36409630-36409713)
chr2 (51-131)||(2331773-2331851)
chr2 (79-132)||(11670733-11670786)
chr2 (45-102)||(18570980-18571037)
chr2 (119-175)||(17442175-17442231)
chr2 (114-166)||(18631462-18631514)
chr2 (73-129)||(24894370-24894426)
chr2 (55-143)||(30471005-30471093)
chr2 (80-124)||(38117188-38117232)
chr2 (53-117)||(39279668-39279732)
[»] chr5 (48 HSPs)
chr5 (51-161)||(13287399-13287509)
chr5 (79-164)||(41995417-41995502)
chr5 (51-166)||(21522694-21522809)
chr5 (51-166)||(21533260-21533375)
chr5 (51-166)||(15382421-15382538)
chr5 (46-151)||(21191051-21191156)
chr5 (51-156)||(21541984-21542089)
chr5 (59-146)||(19293431-19293518)
chr5 (45-143)||(6247589-6247687)
chr5 (53-166)||(15410450-15410563)
chr5 (79-134)||(19552571-19552626)
chr5 (52-166)||(36642763-36642876)
chr5 (51-168)||(6401440-6401557)
chr5 (59-147)||(3751938-3752025)
chr5 (45-180)||(6770473-6770606)
chr5 (46-102)||(17925167-17925223)
chr5 (45-117)||(28588668-28588740)
chr5 (52-135)||(30135288-30135372)
chr5 (51-130)||(16203795-16203874)
chr5 (51-166)||(30183493-30183608)
chr5 (84-166)||(17177056-17177138)
chr5 (51-124)||(3966489-3966562)
chr5 (79-124)||(10298555-10298600)
chr5 (45-102)||(30502382-30502439)
chr5 (45-102)||(30542725-30542782)
chr5 (51-127)||(16374342-16374418)
chr5 (79-143)||(22013381-22013445)
chr5 (58-130)||(27144443-27144515)
chr5 (51-151)||(37328844-37328944)
chr5 (51-102)||(6471889-6471940)
chr5 (79-130)||(14674249-14674300)
chr5 (79-166)||(19579645-19579732)
chr5 (51-134)||(22423812-22423895)
chr5 (46-117)||(33178018-33178089)
chr5 (73-132)||(40000557-40000616)
chr5 (68-166)||(6326314-6326412)
chr5 (51-124)||(2436908-2436981)
chr5 (45-102)||(21576739-21576796)
chr5 (55-140)||(24906305-24906390)
chr5 (79-124)||(31084309-31084354)
chr5 (121-166)||(34276801-34276846)
chr5 (45-98)||(34879362-34879415)
chr5 (51-124)||(39698527-39698600)
chr5 (79-131)||(9449448-9449500)
chr5 (58-142)||(18288058-18288141)
chr5 (131-167)||(18607166-18607202)
chr5 (52-124)||(21351906-21351978)
chr5 (45-117)||(42029745-42029817)
[»] scaffold0053 (1 HSPs)
scaffold0053 (45-166)||(8742-8863)
[»] scaffold0021 (1 HSPs)
scaffold0021 (54-167)||(130425-130538)
[»] scaffold0168 (1 HSPs)
scaffold0168 (55-143)||(21010-21098)
[»] scaffold0652 (1 HSPs)
scaffold0652 (45-164)||(456-575)
[»] scaffold0136 (1 HSPs)
scaffold0136 (51-168)||(3849-3971)
[»] scaffold0020 (1 HSPs)
scaffold0020 (51-132)||(135312-135393)
[»] scaffold0223 (1 HSPs)
scaffold0223 (51-143)||(20139-20231)
[»] scaffold0171 (2 HSPs)
scaffold0171 (51-135)||(23395-23479)
scaffold0171 (51-135)||(23485-23570)
[»] scaffold0126 (1 HSPs)
scaffold0126 (73-165)||(19090-19181)
[»] scaffold0018 (2 HSPs)
scaffold0018 (68-151)||(178835-178919)
scaffold0018 (79-137)||(192277-192335)
[»] scaffold0003 (1 HSPs)
scaffold0003 (51-143)||(241561-241653)
[»] scaffold0022 (1 HSPs)
scaffold0022 (52-135)||(90818-90901)
[»] scaffold0007 (1 HSPs)
scaffold0007 (79-166)||(225296-225383)
[»] scaffold0050 (1 HSPs)
scaffold0050 (45-129)||(70259-70343)
[»] scaffold0116 (1 HSPs)
scaffold0116 (51-166)||(9842-9957)
[»] scaffold0306 (1 HSPs)
scaffold0306 (73-143)||(13367-13437)
[»] scaffold0152 (1 HSPs)
scaffold0152 (73-143)||(21890-21960)
[»] scaffold0110 (1 HSPs)
scaffold0110 (53-123)||(28837-28907)
[»] scaffold0103 (1 HSPs)
scaffold0103 (68-130)||(51791-51853)
[»] scaffold0361 (1 HSPs)
scaffold0361 (68-117)||(14523-14572)
[»] scaffold0011 (1 HSPs)
scaffold0011 (52-124)||(17750-17822)
[»] scaffold1528 (1 HSPs)
scaffold1528 (53-132)||(1013-1092)
[»] scaffold0246 (1 HSPs)
scaffold0246 (68-135)||(19551-19617)
[»] scaffold0036 (1 HSPs)
scaffold0036 (51-102)||(9747-9798)
[»] scaffold0122 (2 HSPs)
scaffold0122 (51-157)||(8619-8725)
scaffold0122 (45-117)||(8003-8074)
[»] scaffold0697 (1 HSPs)
scaffold0697 (45-117)||(1637-1709)
[»] scaffold0428 (1 HSPs)
scaffold0428 (119-175)||(5026-5082)
[»] scaffold0227 (1 HSPs)
scaffold0227 (113-157)||(15008-15052)


Alignment Details
Target: chr7 (Bit Score: 299; Significance: 1e-168; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 15 - 349
Target Start/End: Complemental strand, 21826368 - 21826034
Alignment:
Q  15 aattcaaagtgaacaatcaaagggaaagcacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcg 114  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  21826368 aattcaaagtgaacaatcaaagggaaagcacgtgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcg 21826269  T
Q  115 tgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagttggcaacatatatcaatagagacatcaggataatttcttattgtgct 214  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21826268 tgttagtgtctatgtcgtgtctggtgtccatgtccgtcttcgtgcttcatagttggcaacatatatcaatagagacattaggataatttcttattgtgct 21826169  T
Q  215 tctcatgatcaatcggttaccagtcatcaatcaatttcagcacctgaatcatagctagttagattacttctagttagttaaaagtaaccggtaacttatt 314  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21826168 tctcatgatcaaccggttaccagtcatcaatctatttcagcacctgaatcatagctagttagattacttctagttagttaaaagtaatcggtaacttatt 21826069  T
Q  315 gagcaagtcatttagttctttactctttgtatttg 349  Q
    |||||||||||||||||||||||||||||||||||    
T  21826068 gagcaagtcatttagttctttactctttgtatttg 21826034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 161
Target Start/End: Complemental strand, 26733369 - 26733253
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||||| | |||||||||| |||||||||||| |||||||||||   |||||| ||||| |||||| |||||||||||||||||      
T  26733369 cgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcgg 26733270  T
Q  145 tgtccgtctccgtgctt 161  Q
    | ||||| |||||||||    
T  26733269 tatccgtttccgtgctt 26733253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 22602710 - 22602825
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||||| |||||||||||| |||||| ||| |  |||||||||||| |||| |||||||||||  |||| || ||||||    
T  22602710 cgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgttaggtgcccgtgtccg 22602809  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||| ||||||||    
T  22602810 tatccgtccttcatag 22602825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 1433513 - 1433398
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||  | | |||||||||| ||||||||||||  |||||||||||| | |||| |||||||||  ||||||| || |||    
T  1433513 cgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccg 1433414  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  1433413 tatccgtgcttcatag 1433398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 139
Target Start/End: Complemental strand, 19206108 - 19206021
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggt 139  Q
    ||||||||||||||| |||| | ||| |||||||||||| |||||||||||   ||||||||||||| ||||| ||||||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtctggt 19206021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 26329382 - 26329497
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||| ||||||||||| |||| ||||| || |||| |||| ||||||||||||   ||||||||||| |||||||||||||||||  |||||| |||| |    
T  26329382 cgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtccgtgtctg 26329481  T
Q  151 tctccgtgcttcatag 166  Q
    | | ||||||||||||    
T  26329482 tattcgtgcttcatag 26329497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 15902879 - 15902797
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||||| |||| ||| | |||||||||||| ||||||||||| | |||||||| ||| |||||||||||||||||    
T  15902879 acaccgacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtc 15902797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 35861995 - 35861903
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgtta------gtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    |||||||||||||||||||||||| | ||||||||||||||      |||||||||||||||| |||||||  |||||| |||||||||||||    
T  35861995 ttatgtgattttttcaaattattagttgtgtcggcgtgttagtgttagtgtctgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 35861903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 164
Target Start/End: Original strand, 11061077 - 11061189
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||| | | |||| ||| | ||||||||||||||||||||||||   ||||||| |||| |||||| ||||||| || | ||||| |||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgtgtccgt 11061176  T
Q  152 ctccgtgcttcat 164  Q
     ||||||||||||    
T  11061177 atccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 27945100 - 27945008
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| | | |||| ||||| |||||| ||||| ||||||||||| | |||||||||||| |||||| |||||||||| |||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcc 27945008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 30731094 - 30730981
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||||||||||| |  |||| ||||| |||||||||||| ||||||||||    |||||||||||  | ||| ||||||||||||||||||| ||||||    
T  30731094 cgacaccgacacaca--attacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccg 30730997  T
Q  151 tctccgtgcttcatag 166  Q
    | || |||||||||||    
T  30730996 tatctgtgcttcatag 30730981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 24339701 - 24339596
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| ||||||||||||||||||||||||   |||||||||||| | ||||  ||||||||| ||||||| | ||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccg 24339602  T
Q  151 tctccg 156  Q
    | ||||    
T  24339601 tatccg 24339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 25481967 - 25481846
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| ||||||| |||| | | |||| ||||| ||||||||||||||||||||||||   |||||||||||| | ||||  ||| ||||| | |||||     
T  25481967 cgtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtccg 25481868  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    |||| || ||||||||||||||    
T  25481867 tgtctgtatccgtgcttcatag 25481846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 126
Target Start/End: Original strand, 9408334 - 9408409
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctg 126  Q
    |||||||||||| | | |||| ||| | |||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctg 9408409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 18213027 - 18213149
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaatta-ttaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||||||| |||| ||| | |||||||||||| | |||  | ||| | |||||||||| | |||||| |||||||||||||||| |    
T  18213027 cgtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttc 18213126  T
Q  144 atgtccgtctccgtgcttcatag 166  Q
     ||| ||| || |||||||||||    
T  18213127 gtgttcgtatctgtgcttcatag 18213149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 5409836 - 5409953
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||  ||||| ||||||||||||||||||||||||   || || |||||| ||||||  |||||| || ||||||  |||| |    
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctg 5409935  T
Q  151 tctccgtgcttcatagtt 168  Q
    | ||||||||||||||||    
T  5409936 tatccgtgcttcatagtt 5409953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 11665441 - 11665506
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||| |||||| ||| |||||||||| |||||||||||||||||||||||| | ||||| ||||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgt 11665506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 22868094 - 22868017
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||| |||| ||||| |||||||||||| ||| ||||||| | |||||||||||| |||||| |||| |||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtc 22868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 32094020 - 32094113
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttt-ttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||  | | |||| ||||| |||||||||||| |||||||||||| | |||| ||| ||||||||| |||||||||||| ||||||    
T  32094020 cgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgtttgtgtcgtgtcttgtgtcc 32094113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 7328691 - 7328783
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||||| |||| ||| | |||||| ||||| |||||||||||   || ||| ||||||| ||||||||||||||  |||||||    
T  7328691 cgacaccgacacatataattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtcc 7328783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 130
Target Start/End: Complemental strand, 20549855 - 20549771
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||| |||||||||||||||| |||| ||||| ||| |||||||| |||||||||||   ||||||| |||| ||||| ||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 22484083 - 22484004
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcg 131  Q
    ||||||||||||||| |||| ||||| |||||  ||||| | |||||||||   |||||||||||| |||||||||||||    
T  22484083 gacaccgacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 6630912 - 6630986
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtct 125  Q
    ||||| |||||||||| |||| ||||| ||| |||| ||| ||||||||||| | |||||||||||| |||||||    
T  6630912 cgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtct 6630986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 9778559 - 9778452
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| |||||||||||||||||||||| |   |||||        |||||| |||||||||| ||||||| ||||||    
T  9778559 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtc--------agtgtccgtgtcgtgtccggtgtccgtgtccg 9778468  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  9778467 tatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 143
Target Start/End: Complemental strand, 43250046 - 43249960
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||| ||| |||| ||||  |||||| ||||| |||||||||||  ||||||||||||| |||||| ||||| |||| |||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtcc 43249960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 2425736 - 2425817
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||||  ||  ||| | |||||||||||| ||||||||||||  ||| |||||||| ||| |||||||||||||    
T  2425736 caccgacacatatagttccacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtc 2425817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 3721158 - 3721101
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||| | |||||||||||| |||||||||||    
T  3721158 cgtgtccgacaccgacacatataattatactaaattatgtgattttctcaaattatta 3721101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 3991383 - 3991322
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcgg 112  Q
    |||||||||||| | | |||| ||||| |||||||||||||||||||||||| | |||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 5835305 - 5835232
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtct 125  Q
    ||||||||||||||| |||| ||||| |||||| ||||| ||||| ||||| | |||||||||| | |||||||    
T  5835305 gacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtct 5835232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 21140982 - 21141095
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||| ||||||| ||| || | ||||| |||| ||||||| | ||||||||| | |||||| |||||  | ||| |||||||||  ||||||| ||||||    
T  21140982 cgactccgacacctataatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccg 21141081  T
Q  151 tctccgtgcttcat 164  Q
    | ||||||||||||    
T  21141082 tatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 32308179 - 32308106
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||| ||||||||  |||| ||||| |||||||||||| |||||||||||   |||||||||||| ||||||    
T  32308179 cgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 151
Target Start/End: Complemental strand, 6028656 - 6028584
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||||| || ||||||||||||||| | | |||  |||| ||||||||||||||||||| ||||| |||||||    
T  6028656 ttatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtctgatgtccgtgtccgt 6028584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 132
Target Start/End: Complemental strand, 7438764 - 7438684
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    ||||||||||| | | |||| | ||| |||||||||||||||||||||||||  |||||||| ||| ||||| | ||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgtttatgtcgt 7438684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 4008568 - 4008663
Alignment:
Q  55 accgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||  |||| | ||| | |||| ||||| ||||||||||||  ||||| |||||| ||| |||||||| | |||| ||||||||||||    
T  4008568 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtcatatctgatgtccatgtccg 4008663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 4013960 - 4014055
Alignment:
Q  55 accgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||  |||| | ||| | |||| ||||| ||||||||||||  ||||| |||||| ||| |||||||| | |||| ||||||||||||    
T  4013960 accgacacatacaattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtcatatctgatgtccatgtccg 4014055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 130
Target Start/End: Original strand, 18215214 - 18215265
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||||||||||||||||||||   | ||||||||||||||||| |||||    
T  18215214 ttatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 5307291 - 5307233
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    |||||||||||| ||||||||| | | |||||||||||| | ||||||| |||||||||    
T  5307291 ttatgtgattttctcaaattataagtggtgtcggcgtgtcaatgtctgtatcgtgtctg 5307233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 29763202 - 29763288
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    |||||||||||||||||||||| | | |||| || |||| ||||||| ||||||||  ||||||  ||| ||| ||||| |||||||    
T  29763202 ttatgtgattttttcaaattataagttgtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgtgttcgtatccgtacttcata 29763288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 41020561 - 41020483
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgt 123  Q
    ||||||| |||||||| ||||| |||| ||| | |||||||||||||  ||||||||| | |||||| ||||| |||||    
T  41020561 cgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaattattagttgtgtcgacgtgtcagtgt 41020483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 164
Target Start/End: Complemental strand, 1885632 - 1885519
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| | ||| |||||| ||||||||||| | |||  |||||||  ||||  || || |||||||||| ||||||| |||| |    
T  1885632 cgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttatccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgtccgtgtctg 1885533  T
Q  151 tctccgtgcttcat 164  Q
    | ||||||||||||    
T  1885532 tatccgtgcttcat 1885519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 5233686 - 5233613
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctg 126  Q
    ||||| |||||||| |||| |||   |||||||||||| |||||||||||| ||| |||| |||| ||||||||    
T  5233686 acaccaacacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgtctg 5233613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 9482993 - 9482944
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattat 100  Q
    |||||||||||||||| |||| ||||| || ||||||||| |||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattat 9482944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 10042968 - 10042915
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    |||||||| ||| ||||||||||| | |||||||||||| |||||| |||||||    
T  10042968 ttatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 11722121 - 11722182
Alignment:
Q  74 ctgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||| |||||||||||| ||||||| |||   |||||||||||| |||||| ||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 11722182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 11890985 - 11891022
Alignment:
Q  130 cgtgtctggtgtccatgtccgtctccgtgcttcatagt 167  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  11890985 cgtgtctggtgtccatgtccgtatccgtacttcatagt 11891022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 13557780 - 13557841
Alignment:
Q  87 ttttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtc 148  Q
    |||||| ||||||||| |  ||||||||||| |||||||||||| |||| ||||||| ||||    
T  13557780 tttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtccgtgtc 13557841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 24105702 - 24105653
Alignment:
Q  86 attttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||||||||   |||||||||||| |||||| ||||||||||    
T  24105702 attttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 24105653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 129
Target Start/End: Original strand, 29787386 - 29787447
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgt 129  Q
    |||| ||||| |||||||||||| |||||||||||   |||||||||||||| |||| ||||    
T  29787386 attacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 35297672 - 35297725
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaat 104  Q
    ||||||| |||||||| |||| | ||| |||||||||||| |||||||||||||    
T  35297672 cgacaccaacacatataattataatgaattatgtgattttctcaaattattaat 35297725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 18227008 - 18226964
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgatttt 90  Q
    ||||||||||||||||||||| |||| ||||| |||| |||||||    
T  18227008 gtgttcgacaccgacacatatgattatactgaattatatgatttt 18226964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 23128663 - 23128727
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||||| |||| ||||| |||| || |||| ||||||||||| | ||||| ||||||    
T  23128663 acaccgacacatatgattacactgaattatatggttttctcaaattattattggtgtcagcgtgt 23128727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 43027497 - 43027553
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||||||||||||||||||   | |||| ||||| |||||| ||||||||||    
T  43027497 ttatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtc 43027553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 70)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 9107370 - 9107485
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| || |||||||||||||||||||||   ||||||||||||||||||| |||||||||| ||||||| |||| |    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcag 9107469  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  9107470 tatccgtgcttcatag 9107485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 8776967 - 8777088
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| ||||||| |||| | | |||| ||||| || ||||||||||||||||||||| | |||||||||||| |||||| |||||||||| | |||||     
T  8776967 cgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccg 8777066  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    ||||||| ||||||||||||||    
T  8777067 tgtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 7938174 - 7938060
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||| ||| |||| ||| | |||| |||||||||||||||||||   |||||||||||| ||||||  ||||||||| ||||||| |||||||    
T  7938174 gacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgt 7938075  T
Q  152 ctccgtgcttcatag 166  Q
     ||||||||||||||    
T  7938074 atccgtgcttcatag 7938060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 16766756 - 16766642
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| ||||||||||||||||||||||||   |||||||||||| ||||||  ||||||||| ||||||| ||||||    
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccg 16766657  T
Q  151 tctccgtgcttcata 165  Q
    | ||| |||||||||    
T  16766656 tatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 9027237 - 9027122
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| || || |||||||||| | |||||||||||   |||||||||||| |||||| |||||||||| || |||| ||||||    
T  9027237 cgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccg 9027138  T
Q  151 tctccgtgcttcatag 166  Q
    | || |||||||||||    
T  9027137 tatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 1681800 - 1681702
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||| ||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||  ||||||  |||| || ||||||||||||||    
T  1681800 attacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgtgcttcatag 1681702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 34595199 - 34595101
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||| | | |||| ||||| |||||||||||||||||||||||| | |||||||||||| | |||| |||||||||| |||||||    
T  34595199 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 34595101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 426508 - 426629
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| | | |||| | | | |||||||||||||||||||||||||  |||||||||||| |||||| |||||||||| ||| |||     
T  426508 cgtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccg 426607  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    |||| || ||| ||||||||||    
T  426608 tgtctgtatccatgcttcatag 426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 8365519 - 8365611
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| | | |||| || || ||||||||| |||||||||||||| | |||||||||||| |||||| ||||||||||||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtcc 8365611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 5732504 - 5732627
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||||||| |||| ||| |  ||||||||||| ||||||||||||  |||||||||||| ||||||  |||||||||  ||||||     
T  5732504 cgtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtcgtgtccagtgtccg 5732603  T
Q  145 tgtccgtctccgtgcttcatagtt 168  Q
    |||| || ||| |||||| |||||    
T  5732604 tgtctgtatccatgcttcgtagtt 5732627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 16833365 - 16833283
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||| | | |||| |||||  ||||||||||||||||||||||| | |||||||||||| |||||||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 16833283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 167
Target Start/End: Original strand, 7977825 - 7977946
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccat 145  Q
    |||| |||||||||||| | | |||| ||||| |||||| |||||||||||||||||   |||||||||||| ||| ||  |||||||||  |||||| |    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtccgt 7977924  T
Q  146 gtccgtctccgtgcttcatagt 167  Q
    |||| | ||||||||| |||||    
T  7977925 gtccatatccgtgctttatagt 7977946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 7801156 - 7801228
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgt 123  Q
    |||||||||||| | | ||||  |||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  7801156 cgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 7801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 9658936 - 9658852
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    ||||||||| |||| |||| ||||| |||||||||||| | |||||||||   |||||||||||| |||||| ||||||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctg 9658852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 10770674 - 10770758
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| | | |||| ||||| |||||||||||||||||||||||| | |||| ||||||| ||||||  |||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtc 10770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 19044522 - 19044450
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||||||| || | ||||| ||||||||| || ||||||||||| |||||||||||||| ||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtc 19044450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 20371106 - 20371189
Alignment:
Q  47 tgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||||||||||||||||| || | | |||||||||||||||| |||||||||||   |||||||||||| | |||| |||||    
T  20371106 tgttcgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 139
Target Start/End: Complemental strand, 7086852 - 7086766
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggt 139  Q
    |||||||||||||| |||| ||| | |||||||||||| |||||||||||   ||| || |||||  ||||||||||||||||||||    
T  7086852 acaccgacacatataattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggt 7086766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 7265588 - 7265666
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| |||||||||||   |||| ||||||| ||||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 853887 - 853951
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||||||||||||| | |||||||||||| ||  || |||||||||| |||||||    
T  853887 ttatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtcc 853951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 2386764 - 2386816
Alignment:
Q  114 gtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  2386764 gtgtcagtgtctgtgtcgtgtctgatgtccatgtcagtatccgtgcttcatag 2386816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 12627572 - 12627628
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||| ||||| ||||||||||||||| ||||| |||||||||||||||| |||||||    
T  12627572 gtgtccgacatcgacacatattattacactgaattatgtgattttttcacattatta 12627628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 12696383 - 12696299
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||| ||||| | | |||| ||||| |||||| |||||||||||||||||   |||||||||||| |||||| ||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtc 12696299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 18367895 - 18367780
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||||  || ||||||||| | |||  ||||   ||||||||||||  |||||  ||||||||| ||||||| ||||||    
T  18367895 cgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccg 18367797  T
Q  151 tctccgtgcttcatagt 167  Q
    | |||||||||||||||    
T  18367796 tatccgtgcttcatagt 18367780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 19040417 - 19040345
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||| ||||||||| |||| ||||| |||||||||||| |||||||||||   ||||||||||||    
T  19040417 cgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgt 19040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 100 - 164
Target Start/End: Complemental strand, 24353186 - 24353122
Alignment:
Q  100 ttaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcat 164  Q
    ||||| ||||||||||||  |||| ||||||||||||||||||| ||||||| | ||||||||||    
T  24353186 ttaattgtgtcggcgtgtctgtgtttgtgtcgtgtctggtgtccgtgtccgtattcgtgcttcat 24353122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 33001283 - 33001355
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||||||||| |||| | | | ||||||||||||||||||||||||   ||||||||||||    
T  33001283 cgtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 34290079 - 34290192
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||  |||| ||||| |||||||||| |  |||||||||| | |||||||| ||| ||||| |||||| | || ||||||  ||||||    
T  34290079 cgacaccgacacata--attacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccg 34290176  T
Q  151 tctccgtgcttcatag 166  Q
    | || |||||||||||    
T  34290177 tatctgtgcttcatag 34290192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 7027302 - 7027227
Alignment:
Q  50 tcgacaccgacacatattattagactgagttatgtgatt-ttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||||||||||| |   |||||||||| ||||||||    
T  7027302 tcgacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtc 7027227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 9025494 - 9025545
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||||||| |||| ||||| |||||||||||| |||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 9629442 - 9629328
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| | ||| |||||||||||| ||||||||||    |||||||||||| | | || ||||||||||  |||||  |||  |    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgtgt-ag 9629344  T
Q  151 tctccgtgcttcatag 166  Q
    ||||||||||||||||    
T  9629343 tctccgtgcttcatag 9629328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 10294166 - 10294051
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| | |||  |||| |||| | |||||||||||   || ||||| ||| ||| || |||||||||| ||||| | ||||||    
T  10294166 cgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccg 10294067  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  10294066 tatccgtgcttcatag 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 147
Target Start/End: Original strand, 11784217 - 11784312
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgt 147  Q
    |||||||||| |||| |||| ||||| | |||||||||| |||||||||||   |||| |||||||  ||||||||||||| |  |||||||||||    
T  11784217 gacaccgacatatataattacactgattcatgtgattttctcaaattattatatgtgtgggcgtgtcggtgtctgtgtcgtattaggtgtccatgt 11784312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 17341671 - 17341746
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtg 133  Q
    ||||| ||| |||| ||||| |||||||||||| ||||||||||||  |||||||||||| |||| | ||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 24115847 - 24115962
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||||| ||| |||| |||| | ||| |||||||||||||| ||||||||| | ||||| |||||| |||| || ||||||||  ||||||  |||| |    
T  24115847 cgacaccaacatatataattatattgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtgcctatgtcgtgttcggtgtctgtgtctg 24115946  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||| ||||||||    
T  24115947 tatccgtacttcatag 24115962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 6389796 - 6389702
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||||| ||| |||| ||| | |||| | ||||| |||||||||||  ||||||||||||| |||||| |||||||||| ||||||  |||||||    
T  6389796 cgacacctatgattacactaaattatatcattttctcaaattattatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgtgtccgt 6389702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 7930336 - 7930291
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||||||||||||||||| |||||||| ||| ||||||    
T  7930336 ttatgtgattttttcaaattattaattgtgtcggcatgtcagtgtc 7930291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 141
Target Start/End: Original strand, 8805576 - 8805662
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    |||||||||||||  |||| ||| | |||||||||||| |||||||||||   ||| || |||||  ||||||||||||||||||||||    
T  8805576 acaccgacacata--attacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgt 8805662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 9522948 - 9522835
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtc 152  Q
    |||||||||| | | |||| ||||| |||||||||||||| |||||||||  |||   ||||||| | |||| || || |||||||| ||||||||||      
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattagacgtacaggcgtgtcaatgtccgtatcatgtctggtatccatgtccgca 9522849  T
Q  153 tccgtgcttcatag 166  Q
    | ||||||||||||    
T  9522848 ttcgtgcttcatag 9522835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 15489733 - 15489845
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||| | | |||| | ||| || ||| ||||||||||||||||| | |||||| |||||||||||| |||| |||||  ||| || ||||||     
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtcatgtg-ccgtgtccgc 15489831  T
Q  152 ctccgtgcttcata 165  Q
     |||||||||||||    
T  15489832 atccgtgcttcata 15489845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 17841583 - 17841668
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||| |||||||| ||| | | |||| ||| | ||||||||||||||||||||||||   |||||||||||| |||||| |||||    
T  17841583 cgtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 165
Target Start/End: Original strand, 10339148 - 10339240
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    ||||| |||||||||||| |||||||| |    |||||||||||| |||||   |||||||||  ||||||||||| || |||||||||||||    
T  10339148 actgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtccatgtctgtatccgtgcttcata 10339240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 10842585 - 10842525
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||| |||| ||| | ||||||||||||||||||||||||   ||||||||||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgt 10842525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Complemental strand, 3398677 - 3398595
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    ||||||||| || ||| |||| ||||| |||| |||||||| ||||||||||   |||||||||||| |||||| |||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgt 3398595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 4118361 - 4118444
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttc 162  Q
    |||||||||||||||||||||||||   | ||| ||||||| | |  |||||||||| ||||||| ||||||| || |||||||    
T  4118361 ttatgtgattttttcaaattattaactatatcgtcgtgttaatatacgtgtcgtgtccggtgtccgtgtccgtatcagtgcttc 4118444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 5970125 - 5970217
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||| |||||||||||||||||||||||||  |||||| |      ||||| ||||| |||| ||||||| ||||||| || |||||||||||    
T  5970125 attacactgaattatgtgattttttcaaattattaactgtgtcgac------gtgtccgtgtcatgtccggtgtccgtgtccgtatctgtgcttcatag 5970217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 7151471 - 7151420
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||||| |||||||| |||| ||| | ||||||||||||||||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattatta 7151420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 9617493 - 9617442
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||||||| |||| | ||| |||||||||||| |||||||||||    
T  9617493 cgacaccgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 25096454 - 25096367
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||| ||||||||||| | |||||| |||||  |||||||||| || || | ||||| ||||||| | ||||||| ||||    
T  25096454 ttatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgttgtatccgatgtccgtgtccgtatacgtgctttatag 25096367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 31579221 - 31579277
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaa 103  Q
    ||||| |||||||||||||||  |||| ||||| |||||||||||| ||||||||||||    
T  31579221 cgtgtccgacaccgacacata--attacactgaattatgtgattttctcaaattattaa 31579277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 677868 - 677818
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgt 129  Q
    |||| ||||||| ||||||||||||  |||||||||||| |||||||||||    
T  677868 ttatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 82 - 124
Target Start/End: Original strand, 12868706 - 12868748
Alignment:
Q  82 tgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||||||||||||||  |||||||||||| ||||||    
T  12868706 tgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 12868748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 13851794 - 13851712
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    |||| |||||||||| |||| ||||| ||| || ||||| |||||||||||   |||||| ||||| |||||| |||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 26562748 - 26562682
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||| |||| ||||| |||||||||||| ||||||| |||   ||||||||||||    
T  26562748 cgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgt 26562682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 33303688 - 33303626
Alignment:
Q  81 atgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||| ||||||||||||||||| | ||||||  |||| |||||| || |||||||||||||||    
T  33303688 atgtcattttttcaaattattattagtgtcgatgtgtcagtgtccgtatcgtgtctggtgtcc 33303626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 7378044 - 7377991
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaatt 98  Q
    ||||| |||||||||||||||| |||| | ||| |||||||||||| |||||||    
T  7378044 cgtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatt 7377991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 7996378 - 7996451
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||| ||||| |||| ||||| |||| ||||||| |||||||||||   |||||||| ||| ||||||    
T  7996378 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 7996451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 8022423 - 8022350
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||| ||||| |||| ||||| |||| ||||||| |||||||||||   |||||||| ||| ||||||    
T  8022423 cgacaccgacgcatataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtc 8022350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 13360373 - 13360438
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||| |||||| |||| ||||| |||||||||||| |||||||| || | |||||| |||||    
T  13360373 gacaccgaaacatataattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgt 13360438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 20518404 - 20518323
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    ||||||| |||||||| |||| ||||| |||||| ||||| ||||||| ||| | ||||  | |||| ||||||||||||||    
T  20518404 cgacaccaacacatataattatactgatttatgtaattttctcaaattgttagtggtgttagtgtgtcagtgtctgtgtcgt 20518323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 21924930 - 21924999
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgt 115  Q
    |||| |||||||||||||||| |||| ||||| |||| |||| || |||||||||||   ||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 26178683 - 26178732
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||||| |||| ||| | |||||||||||| |||||||||||    
T  26178683 acaccgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 28152163 - 28152079
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||| |||||||||||| | | |||| ||||| ||||||||| ||||||||||||||    ||||||||||| |||||| |||||    
T  28152163 cgtgtccgacaccgacacttgtaattacactgaattatgtgat-ttttcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 28715360 - 28715303
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||| | | |||| ||||| |||||| |||||||||||||||||    
T  28715360 cgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 34447360 - 34447450
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||||||||||| |  |||| ||| | |||| ||||||| ||||||||||||  |||| ||||||| | |||||||||  ||||||||||||    
T  34447360 cgacaccgacacaaa--attacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgttatgtctggtgtcc 34447450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 3209413 - 3209326
Alignment:
Q  79 ttatgtgatttttt-caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||||| ||||||||||   ||||||||||||  ||||| |||||||||| ||||||| |||  || |||||||| |||||    
T  3209413 ttatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgtc-gtgtcgtgtccggtgtccgtgtttgtatccgtgctacatag 3209326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 166
Target Start/End: Complemental strand, 7625146 - 7625066
Alignment:
Q  86 attttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||| |||||||||||  ||||||| |||||  |||||||||||||||| | ||||| ||||  | ||||||||| ||||    
T  7625146 attttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtccgatgtccgtgtctatgtccgtgctttatag 7625066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 31673543 - 31673595
Alignment:
Q  108 gtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgct 160  Q
    ||||||||||| ||||| ||| |||||| ||||||| ||||||| ||||||||    
T  31673543 gtcggcgtgtttgtgtccgtgccgtgtccggtgtccgtgtccgtatccgtgct 31673595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 33283263 - 33283319
Alignment:
Q  119 agtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagttggcaaca 175  Q
    |||||||||||||| |||| ||||| ||||||| |||||||| | | ||||||||||    
T  33283263 agtgtctgtgtcgtatctgatgtccgtgtccgtatccgtgctaccttgttggcaaca 33283319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 34073347 - 34073431
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||| ||||| |||| ||||| ||||| |||||| |||||||||||    ||| ||| ||| |||||| ||||||||||    
T  34073347 cgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtc 34073431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 29510306 - 29510419
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtc 152  Q
    |||||||||| | | |||| ||||| || |||||||||||||||||||||   |||||||||||| |||||| |||||||||| |||||||||||| ||     
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgtcagta 29510405  T
Q  153 tccgtgcttcatag 166  Q
    ||||||||||||||    
T  29510406 tccgtgcttcatag 29510419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 11944724 - 11944632
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||||| |||| |||||||||||||||||| ||||||||||||  |||||||||||||||  || ||||||||| ||||||||    
T  11944724 cgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtcc 11944632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 22652035 - 22651920
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| | ||| ||||||||||||||||||||||||   |||||||||||| |||||| |||||||||| ||||||  ||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcagtgtccg 22651936  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||| ||||||||    
T  22651935 tatccgtacttcatag 22651920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 44067569 - 44067460
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccg 156  Q
    |||||| ||| |||| ||||  |||||| ||||| |||||||||||  ||||||||||||| |||||| |||| ||||||||||||| |||| || ||||    
T  44067569 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtccgtgtctgtgtccg 44067470  T
Q  157 tgcttcatag 166  Q
    ||||||||||    
T  44067469 tgcttcatag 44067460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 11927086 - 11927178
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||||| |||| ||||| |||||||||||| ||||||||||||  |||||||||| ||||  || ||||||||| ||||||||    
T  11927086 cgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtcc 11927178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||||||| |||| ||||| |||||||||||| | ||||||||||| |||||||||||| ||||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 4298914 - 4298970
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  4298914 ttatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtc 4298970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 13436964 - 13437064
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | ||||||   ||| ||||||||||||||||||||||||   |||||||||||| ||||||  |||| |||| ||||||||||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgtccg 13437063  T
Q  151 t 151  Q
    |    
T  13437064 t 13437064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 22197770 - 22197858
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagt 167  Q
    |||||||| |||||||||||||||   |||| ||||||||||||||||||||||||| ||||||| ||||    |||||||||||||||    
T  22197770 ttatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtccgtgtctagatccgtgcttcatagt 22197858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 24362209 - 24362317
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgt 157  Q
    ||||||||| |||| ||||| |||||||||| | |||||||||||   ||||||||||||  ||||||||||||| || ||||||| | ||||| || ||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgt 24362308  T
Q  158 gcttcatag 166  Q
    |||||||||    
T  24362309 gcttcatag 24362317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 37283814 - 37283927
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtc 152  Q
    |||||||||||||  |||| ||||| |||||||||||| ||| |||||||   ||| | || ||| |||||| ||||| |||||||||||||||| |||     
T  37283814 acaccgacacata--attacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtccatgtacgta 37283911  T
Q  153 tccgtgcttcatagtt 168  Q
    ||||||||||||||||    
T  37283912 tccgtgcttcatagtt 37283927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 926788 - 926902
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| ||| |||| |||||   ||| |||||| |||||||||||   |||| ||||||| |||||| |||||||||| ||||||| ||| ||    
T  926788 cgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcg 926887  T
Q  151 tctccgtgcttcata 165  Q
    | |||||||||||||    
T  926888 tatccgtgcttcata 926902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 15816129 - 15816202
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||| ||| |||| ||| | |||||||||||||||||||||||| | |||||||||||| ||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 24669496 - 24669408
Alignment:
Q  47 tgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||||||| | | |||| ||||| |||||| ||||  ||||||||||||  ||||| |||||| |||||||||||||||||    
T  24669496 tgttcgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtc 24669408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 2572056 - 2572171
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||| | ||||||||||||||||||||||||   |||||| |||||  || || ||||||||||  |||||| ||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  151 tctccgtgcttcatag 166  Q
    | ||| ||||||||||    
T  2572156 tatccatgcttcatag 2572171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 20873134 - 20873044
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||| |||||||||||| | | |||| ||| | ||||||||||||||||||||||||    ||||||||||| |||||| ||||||||||    
T  20873134 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtc 20873044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 24413553 - 24413675
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaa-ttattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||| ||||| ||| ||||  |||| ||||||  |||| ||||| |||||||  ||||| |  ||| |||||| ||||||||||||||||||    
T  24413553 cgtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtcc 24413652  T
Q  144 atgtccgtctccgtgcttcatag 166  Q
     ||||||| ||||||||||||||    
T  24413653 gtgtccgtatccgtgcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 141
Target Start/End: Complemental strand, 36934721 - 36934639
Alignment:
Q  59 acacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    |||||||| |||| | ||| ||||||||||||||| ||||||||   |||||| |||||||||||| ||||||||| ||||||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgt 36934639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 4673458 - 4673538
Alignment:
Q  84 tgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    |||||||||||||||||||   |||||||||||| ||||||||||||||||| | ||||| | ||||| | |||||||||||    
T  4673458 tgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgtat-cgtgcttcata 4673538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 36450748 - 36450833
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||| ||||||| |||| | | |||| ||||| || ||||||||||||||||||||| | |||||||||||| |||||| |||||    
T  36450748 cgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 13844591 - 13844662
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||| |||||||||||||||| |||| ||| | |||||||||||| |||||||||||   ||||||||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgt 13844662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 67 - 165
Target Start/End: Complemental strand, 24858055 - 24857954
Alignment:
Q  67 tattagactgagttatgtgatttttt---caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttca 163  Q
    ||||| ||||| ||||||||||||||   |||||||||||  ||||||||||||   |||| |||||||||| ||||| | ||||||| ||||| |||||    
T  24858055 tattacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgttcgtgtccgtatccgttcttca 24857956  T
Q  164 ta 165  Q
    ||    
T  24857955 ta 24857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 31109518 - 31109597
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||| |||||||||  ||||||||| || | ||||||| ||||||||||||  |||||||||||| |||||| |||||    
T  31109518 cgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 18170482 - 18170564
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtg 133  Q
    |||||||||||  | | |||| | ||| |||||| ||||||||||||| ||||| |||||||||||| |||||| ||||||||    
T  18170482 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18170564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 18634050 - 18634132
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtg 133  Q
    |||||||||||  | | |||| | ||| |||||| ||||||||||||| ||||| |||||||||||| |||||| ||||||||    
T  18634050 cgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtg 18634132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 28384995 - 28385077
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    ||||||||||||||| |||| ||||| ||||| ||||| |||| ||||||||  |||||||  ||| |||||| |||||||||    
T  28384995 gacaccgacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtgtcgtgt 28385077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 4948717 - 4948660
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||| | | |||| ||||| ||||||||||||||||||||||||    
T  4948717 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 4948660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 14134764 - 14134707
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||| |||||||||| |||| |||| ||||| |||||||||||| |||||||||||    
T  14134764 cgtgtttgacaccgacatatataattacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 25192350 - 25192431
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||| ||| |||| ||||| |||||| | |||||||||||||||   |||||||||||| |||||| || |||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtc 25192431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 137
Target Start/End: Complemental strand, 3677843 - 3677759
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    ||||||| |||||| |||| |  || |||||||||||||| ||||||||||| ||||||  |||| ||| || ||||||||||||    
T  3677843 acaccgatacatataattacatagaattatgtgattttttaaaattattaattgtgtcgatgtgtcagtatccgtgtcgtgtctg 3677759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 31236571 - 31236643
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| || ||||||||||||| |||| | ||| |||||||||||| |||||||||||   ||||||||||||    
T  31236571 cgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 34897149 - 34897093
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||| ||||| |||||||||| |||| ||||| |||||||||||| |||||||||||    
T  34897149 gtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 136
Target Start/End: Complemental strand, 13018338 - 13018255
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtct 136  Q
    |||||||  ||||| |||| ||| | |||||||||||| ||||||||||||  || | | ||||||||||||||||| ||||||    
T  13018338 acaccgattcatatcattacactaaattatgtgattttgtcaaattattaacggtattgacgtgttagtgtctgtgttgtgtct 13018255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 25566900 - 25566849
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||| | | |||| ||||| ||||||||||||||||||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattatta 25566849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 141
Target Start/End: Original strand, 949292 - 949354
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    |||| ||||||||||||||||||||  |||||| ||| | ||| | |||||||||||||||||    
T  949292 ttatttgattttttcaaattattaactgtgtcgacgtatcagtatttgtgtcgtgtctggtgt 949354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 3951598 - 3951644
Alignment:
Q  120 gtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||| ||||||| |||||||||| ||||||| ||||||||||||||    
T  3951598 gtgtccgtgtcgtatctggtgtccgtgtccgtatccgtgcttcatag 3951644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Complemental strand, 7658520 - 7658458
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgt 115  Q
    ||||||||| |||| |||| ||||| |||||| ||||| ||||||||||| | ||||||||||    
T  7658520 acaccgacaaatataattacactgaattatgtaattttctcaaattattagtggtgtcggcgt 7658458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 33405378 - 33405436
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaa 103  Q
    ||||| |||||||||||||||| |||| ||| | ||||||| |||| ||||||||||||    
T  33405378 cgtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaa 33405436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 3025616 - 3025559
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||| ||||| ||| |||| ||||| |||||||||||| |||||||||||    
T  3025616 cgtgtccgacactgacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 29358035 - 29357938
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaa-ttattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtc 148  Q
    ||||||||||||||| | || | | | |||||||| ||||||||| |||||||  || ||| ||| | ||||||| ||||||||| ||||||||||||    
T  29358035 gacaccgacacatataaatacattaaattatgtgagtttttcaaaattattaacagtatcgacgtatcagtgtctatgtcgtgtccggtgtccatgtc 29357938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 135
Target Start/End: Complemental strand, 8343383 - 8343291
Alignment:
Q  43 cacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||| |||||| ||||| | | |||| ||| | ||||||||||||||||||||||||    |||||| ||||  ||||| ||||||||||    
T  8343383 cacgtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtc 8343291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 141
Target Start/End: Complemental strand, 11803316 - 11803228
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    ||||| |||||||| |||| ||||| |||||||||||| | ||||||||||  ||||| | || | |||||  ||||||||| ||||||    
T  11803316 acaccaacacatataattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgtttggtgt 11803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 12985456 - 12985400
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||| ||||||||||| |||| |||| | ||| |||||||||||| |||||||||||    
T  12985456 gtgtccgacaccgacatatatgattacattgaattatgtgattttctcaaattatta 12985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 16642029 - 16642081
Alignment:
Q  114 gtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||||||||||||||| || |||| | ||||| ||||||||||||||    
T  16642029 gtgtcagtgtctgtgtcgtgtccggcgtccgtatccgtatccgtgcttcatag 16642081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 165
Target Start/End: Complemental strand, 18116288 - 18116252
Alignment:
Q  129 tcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    |||||||||||||||||||| || |||||||||||||    
T  18116288 tcgtgtctggtgtccatgtctgtatccgtgcttcata 18116252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 18964167 - 18964115
Alignment:
Q  114 gtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| |||||| |||||||||||||||||| ||||||| || ||||| |||||    
T  18964167 gtgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtatctgtgctacatag 18964115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 113
Target Start/End: Original strand, 41831962 - 41832002
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggc 113  Q
    ||||| |||||||||||||||||||||||||  ||||||||    
T  41831962 actgaattatgtgattttttcaaattattaactgtgtcggc 41832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 23292980 - 23293101
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| | | |||| ||||| ||||||||||||||||||||||||   |||||||||||| | |||| |||||||||| |||||||     
T  23292980 cgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccg 23293079  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    ||||||| || |||||||||||    
T  23293080 tgtccgtatctgtgcttcatag 23293101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 19482699 - 19482612
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||||||||||  ||| ||| ||||||||||||||    
T  19482699 ttatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtgcttcatag 19482612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 27706205 - 27706286
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgct 160  Q
    |||||||||||||| ||||||||||| |||||| ||||| ||||||  ||||||||||||||||| ||||||| ||||||||    
T  27706205 ttatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtccgtgtccgtatccgtgct 27706286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 14126118 - 14126195
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||| ||| |||| ||||| |||||||| ||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtc 14126195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 24343560 - 24343451
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccg 156  Q
    |||||| ||| |||| ||||| |||||| ||||| |||||||||||  |||||||||||||  | ||| |||||||||| ||||||| |||| || ||||    
T  24343560 cgacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24343461  T
Q  157 tgcttcatag 166  Q
    ||||||||||    
T  24343460 tgcttcatag 24343451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 35157986 - 35158091
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||| ||| |||| ||| | ||||||||||||| |||||||||| | | |||||||||| |||||| |||| ||||| ||||||| |||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtccgtgtccgt 35158085  T
Q  152 ctccgt 157  Q
     |||||    
T  35158086 atccgt 35158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 52 - 163
Target Start/End: Complemental strand, 848009 - 847898
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||| | | |||| | ||| |||||| ||||| |||||||||||   |  ||||||||| ||||||||||||||||| || ||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccggggtccatgtccgt 847910  T
Q  152 ctccgtgcttca 163  Q
     |||||||||||    
T  847909 atccgtgcttca 847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 20633508 - 20633429
Alignment:
Q  87 ttttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||||||||||||   |||||| ||||| |||||| || ||||||||||||||| ||||||| ||||||||||||||    
T  20633508 ttttttcaaattattagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 36635375 - 36635268
Alignment:
Q  59 acacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtg 158  Q
    |||||||| |||| ||||| |||||||||||| ||||||||||| | |||| ||||||| |||||| | |||||||| ||||||  ||||| | ||| ||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatg 36635276  T
Q  159 cttcatag 166  Q
    ||||||||    
T  36635275 cttcatag 36635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 12895268 - 12895389
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| ||| |||| ||  | |||||||||||||||||||||||| | |||||||||||| | |||  ||||||| || |||||||     
T  12895268 cgtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccg 12895367  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    | ||||| || ||| |||||||    
T  12895368 tatccgtatctgtgtttcatag 12895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 20521877 - 20521954
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccg 156  Q
    |||||||||||| |||||||||||   || ||||||||| |||||| |||||||||||||||||||||| ||| ||||    
T  20521877 ttatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtccatgtacgtatccg 20521954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 40179630 - 40179715
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||| |||||||||| ||||| |||| ||||| |||||||||||||||||| ||||||| |||||  ||||| |||||| |||||    
T  40179630 cgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtc 40179715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 4157154 - 4157102
Alignment:
Q  114 gtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  4157154 gtgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccgtgcttcatag 4157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 21945562 - 21945470
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| | | |||| ||||| |||||| |||||||||||||||||   |||||||| ||| |||||||||||| |||| |||||||    
T  21945562 cgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtcc 21945470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 54580017 - 54580087
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgt 115  Q
    ||||| |||||||||||| ||| |||| ||||| |||||||||||||||||||||||| | ||||| ||||    
T  54580017 cgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 166
Target Start/End: Complemental strand, 903971 - 903866
Alignment:
Q  61 acatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgct 160  Q
    |||||| |||| ||||| |||||||||||| ||||||||||||  ||| ||| |||| |||||| || |  ||||||| | || ||||||| ||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgttttatgtctggcgcccgtgtccgtatccgtgct 903872  T
Q  161 tcatag 166  Q
    ||||||    
T  903871 tcatag 903866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 12708162 - 12708090
Alignment:
Q  94 aaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||||| | ||||| |||||| |||||||| |||||||||| ||||| ||||||| | ||||||||||||    
T  12708162 aaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtctgatgtccgtgtccgtattcgtgcttcatag 12708090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 15029824 - 15029715
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||||| |||||||| |||| ||||| ||||||||| ||||||||||||||   ||||| ||      ||||| |||||||||| ||| ||||||||||    
T  15029824 cgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgc------gtgtcagtgtcgtgtccggtctccatgtccg 15029731  T
Q  151 tctccgtgcttcatag 166  Q
    | ||| ||||||||||    
T  15029730 tatccctgcttcatag 15029715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 36409506 - 36409577
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||||||||| ||| |||| ||| | |||||||| |||||| |||||||||| ||||||||||||    
T  36409506 cgtgttcgacaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgt 36409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 36423672 - 36423743
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||||||||| ||| |||| ||| | |||||||| |||||| |||||||||| ||||||||||||    
T  36423672 cgtgttcgacaccgacacctataattacactaaattatgtgactttttc-aattattaatggtgtcggcgtgt 36423743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 5775359 - 5775418
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcg 111  Q
    ||||||||||||||| |||| ||| | |||||||||||| ||||||||||||| ||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 40742650 - 40742536
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||| |||||||||| |||| |||   |||| ||||||| ||||||||||||| |||||||||| | | |||| ||||||| ||  |||||||||| ||    
T  40742650 cgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcgtatccagtgtccatgt-cg 40742552  T
Q  151 tctccgtgcttcatag 166  Q
    | | ||||||||||||    
T  40742551 tattcgtgcttcatag 40742536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 132
Target Start/End: Original strand, 12797332 - 12797418
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    ||||| |||||||||||| | | |||| ||||| |||||||| ||||||||||||||| |  || |||||||| |||||| |||||||    
T  12797332 cgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccgtgtcgt 12797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 40481678 - 40481612
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||| ||||| ||||||||||||| |||||||||| | || ||||||||| |||||| ||||||||||    
T  40481678 attacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtc 40481612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 135
Target Start/End: Complemental strand, 49431091 - 49431000
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgatt-ttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||| |||||||||||| | | |||| ||||| |||||||||| ||||||||||||||   |||||||||||| | |||| | ||||||||    
T  49431091 cgtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtc 49431000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 11931338 - 11931224
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||| ||||||||||  ||| ||| | |||||||||||||||| ||||||||  |||||||| ||  | |||| |||| |||||  |||||| ||||  |    
T  11931338 gacatcgacacatatatttacactaaattatgtgattttttcatattattaacggtgtcggcatggcattgtccgtgtagtgtccagtgtccgtgtctat 11931239  T
Q  152 ctccgtgcttcatag 166  Q
    |||||| ||||||||    
T  11931238 ctccgtacttcatag 11931224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 37203268 - 37203222
Alignment:
Q  120 gtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||||||| ||||||| ||||| | ||||||||||||||    
T  37203268 gtgtctgtgtcgtgtccggtgtccgtgtccatatccgtgcttcatag 37203222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 6485613 - 6485690
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||||||| | | |||| ||| | ||||||||||||||||||||||||||  |||| ||||||  ||||| |||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgtaggtgtccgtgtc 6485690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 8423712 - 8423769
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||  ||| |||| ||||| |||||||||||| |||||||||||    
T  8423712 cgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 101
Target Start/End: Complemental strand, 9996898 - 9996849
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattatt 101  Q
    |||||||| |||||| |||| ||||| |||||||||||| ||||||||||    
T  9996898 gacaccgagacatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 137
Target Start/End: Original strand, 22440609 - 22440686
Alignment:
Q  60 cacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    ||||||| |||| ||||| |||||||||||| ||||||||||||  ||||||  || | ||||||  |||||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtccatgtcgtgtctg 22440686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 28084553 - 28084488
Alignment:
Q  79 ttatgtgatttttt-caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||| |||||| |||   |||||||||||| || |||||||||||||| |||||||    
T  28084553 ttatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtcc 28084488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 28964242 - 28964299
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||| ||||| | | |||| ||||| ||||||||||||||||||||||||    
T  28964242 cgtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattatta 28964299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 29205501 - 29205452
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||| | | |||| ||||| ||||||||||||||||||||||||    
T  29205501 acaccgacacttgtaattacactgaattatgtgattttttcaaattatta 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 117
Target Start/End: Complemental strand, 40613504 - 40613443
Alignment:
Q  56 ccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||||||||| |||| ||||| |||||||||||| ||||| |||||   ||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgt 40613443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 2361969 - 2362092
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc--gtgtctggtgtc 142  Q
    ||||| |||||||||||| | | |||| ||| | |||||| |||||||||||||||||   ||||||| |||| | ||||  ||||  ||||||| |||     
T  2361969 cgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgtgtctgatgtt 2362068  T
Q  143 catgtccgtctccgtgcttcatag 166  Q
    | ||||||| ||||| ||||||||    
T  2362069 cgtgtccgtatccgtacttcatag 2362092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 3947766 - 3947850
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||| ||||| | | |||| ||||| ||||| ||||||||||||||||||   |||||||| |||  |||||||||| |||||    
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtc 3947850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 135
Target Start/End: Original strand, 12628617 - 12628669
Alignment:
Q  83 gtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||||||||||||  |||||||| ||| |||||| ||||| ||||    
T  12628617 gtgattttttcaaattattaactgtgtcggcatgtcagtgtcagtgtcatgtc 12628669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 20743286 - 20743350
Alignment:
Q  59 acacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgt 123  Q
    |||| ||| |||| ||||| |||||| ||||| |||||||||||  ||||||||||||| |||||    
T  20743286 acacctatgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 101
Target Start/End: Original strand, 30103351 - 30103406
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatt 101  Q
    |||||| ||||||||||||||| |||| ||| | |||||||||||| ||||||||||    
T  30103351 cgtgtttgacaccgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 30299006 - 30298926
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttttt-caaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||||||||| | | |||| ||||| |||||| ||||||| ||||||||||   |||||||||||| |||||| |||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 30327874 - 30327794
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttttt-caaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||||||||| | | |||| ||||| |||||| ||||||| ||||||||||   |||||||||||| |||||| |||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 44081584 - 44081692
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgt 157  Q
    ||||||||| |||| | | | |||| ||||||||||||||||||||   | |||| |||| ||||||  ||||||||| | ||| | ||||||| || ||    
T  44081584 gacacatataattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttcgtgtccgtatcggt 44081683  T
Q  158 gcttcatag 166  Q
    |||||||||    
T  44081684 gcttcatag 44081692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 44 - 165
Target Start/End: Original strand, 16000009 - 16000130
Alignment:
Q  44 acgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||| |||||||||||| | |  ||| ||||| |||||| ||||||| ||||||||| | |||||||||||| ||||||||||||||||  |||||||    
T  16000009 acgtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtcc 16000108  T
Q  144 atgtccgtctccgtgcttcata 165  Q
     ||||||| |||||||||||||    
T  16000109 gtgtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 15796294 - 15796410
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||  | | |||| ||||| |||| ||||||||||||||||||||  |||||||||||| | |||| |||||||||| ||||||| |||||     
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcca 15796393  T
Q  151 tctccgtgcttcatagt 167  Q
    | |||||||||||||||    
T  15796394 tatccgtgcttcatagt 15796410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 25093566 - 25093470
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    |||| |||||||||||||||| |||| ||||| || ||||||||| |||||| |||||  ||||||||||||||||||| |||||||||| ||||||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtc 25093470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 80 - 166
Target Start/End: Original strand, 10335315 - 10335401
Alignment:
Q  80 tatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||| ||||||||||||||| | |||||||||||| |||||| |||||||||| ||||||| ||| ||| ||||||||||||||    
T  10335315 tatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgttcgtatccgtgcttcatag 10335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 24205047 - 24205156
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccg 156  Q
    |||||| ||| |||| ||||  |||||| ||||| |||||||||||  ||||||||||||| |||||| |||||||||| ||||||| |||| || ||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccg 24205146  T
Q  157 tgcttcatag 166  Q
    ||||||||||    
T  24205147 tgcttcatag 24205156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 750646 - 750734
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgtta-gtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||||| |||||||||||||| | |||||| ||||| | ||||| |||||||||| ||||||| ||||||| ||||||||||||||    
T  750646 ttatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 151
Target Start/End: Complemental strand, 8383324 - 8383216
Alignment:
Q  43 cacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    ||||||| |||||||||||| ||| |||| ||||| |||| ||||||| |||||||||||   |||||||||||| | |||| ||||||||||  |||||    
T  8383324 cacgtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtc 8383225  T
Q  143 catgtccgt 151  Q
    | |||||||    
T  8383224 cgtgtccgt 8383216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 10955017 - 10954939
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgt 123  Q
    ||||| |||||||||||| | | |||| ||||| |||||||||||||||||||||||| | |||||||||||| |||||    
T  10955017 cgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 35994755 - 35994852
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||| |||||||||||| |||||||||||   |||||||| ||| | ||||  ||||||||| ||||||||||||||| ||||||||||||||    
T  35994755 attacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccatgtccgtatccgtgcttcatag 35994852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 55401140 - 55401042
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||| | | |||| ||| | |||||||||||||||||||||||| | |||||||||| | |||||| ||||||| || |||||||    
T  55401140 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtcc 55401042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 3164047 - 3164140
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||| ||||||||||||||||||||||||   |||||| ||||  | |||| |||||||||| ||||||| |||| || ||||||||||||||    
T  3164047 actgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtccgtgtctgtatccgtgcttcatag 3164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 3610675 - 3610602
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    |||| |||||||||||| ||||||| ||||||||||  |||| ||||||| ||||||||||||||||| |||||    
T  3610675 attacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 7928515 - 7928458
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  7928515 cgtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 166
Target Start/End: Original strand, 34307786 - 34307895
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccg 156  Q
    |||||| ||| |||| |||||  ||||||||||| |||||||||||   ||||| ||||||| ||||||||||| |||| ||||| | ||||||| |||     
T  34307786 cgacacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatcca 34307885  T
Q  157 tgcttcatag 166  Q
    ||||||||||    
T  34307886 tgcttcatag 34307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 28918060 - 28917968
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| | | |||| ||||| ||||||||||||||||||||||||    ||||||||||| ||| || |||||||||| |||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtcc 28917968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 41961650 - 41961742
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| | | |||| || || | ||||||| |||||||||||||| | ||| |||||||| ||||||||||||||||| |||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtcc 41961742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 11666003 - 11665912
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    |||||||||||||||| |||| ||| | || ||||||||| |||||||||||    |||||| |||||||||| ||||||||||| ||||||    
T  11666003 cgacaccgacacatataattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtc 11665912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 142
Target Start/End: Complemental strand, 26290430 - 26290340
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    |||||| ||||||||| |||| || ||  ||||||||||| ||||||||||||| |||||||||||| ||||||| |||||| || ||||||    
T  26290430 cgacactgacacatataattaaaccgaactatgtgattttctcaaattattaatggtgtcggcgtgtcagtgtct-tgtcgtatccggtgtc 26290340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 14829720 - 14829652
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtc 148  Q
    ||||||||||||| ||||||||||   |||||||||||| |||||||||||| |||| ||||||||||||    
T  14829720 ttatgtgattttt-caaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtccatgtc 14829652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 45451618 - 45451561
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| ||||||||||||||||||||| |||||  ||||||||||| |||||||||||    
T  45451618 cgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattatta 45451561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 143
Target Start/End: Original strand, 8587021 - 8587113
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| | | |||| ||| | ||||||||||||||||||||| ||   |||||||||||| |||||| ||||| |||| |||||||    
T  8587021 cgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtcc 8587113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 73 - 141
Target Start/End: Original strand, 25652053 - 25652121
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    ||||| |||| | ||||| |||||||||||  ||||| |||||||||||||| ||||||||||||||||    
T  25652053 actgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgt 25652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 7614409 - 7614476
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcgg 112  Q
    ||||||||||||||||| |||| |||| ||||| |||||||||||| | ||||||||||  |||||||    
T  7614409 cgtgttcgacaccgacatatataattatactgaattatgtgattttcttaaattattaactgtgtcgg 7614476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 10268514 - 10268601
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||  ||||||    | ||||| ||| ||| ||||||||||||||    
T  10268514 ttatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgtaatcgatgtccgtgttcgtatccgtgcttcatag 10268601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 10455849 - 10455734
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||||| |||||||| |||| ||| |||||| ||||||| ||| |||||||   |||| ||||||| | || ||||||||||||  |||||| ||||      
T  10455849 cgacaccaacacatataattacacttagttatatgattttctcatattattagcagtgttggcgtgtcaatgcctgtgtcgtgtccagtgtccgtgtcta 10455750  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  10455749 tatccgtgcttcatag 10455734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 25064940 - 25064877
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    ||||||||||||||||||| ||||   |||||||||||| | ||||||||||||||| ||||||    
T  25064940 ttatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtc 25064877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 25948887 - 25948966
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||| |||| ||| |||| ||||| ||||||||||||||||||||||||  ||| ||||| ||| |||||| |||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 18427008 - 18426942
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||||||||| |||| |||| || || |||||||||||||| ||||||||| | ||||||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgt 18426942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 34910376 - 34910310
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||| | | | |||| ||||| |||||||||||||||||||||||| | ||||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 34910310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 13807227 - 13807158
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagt 121  Q
    |||||||||||||||||||| | ||| |||||||||||| ||||||| |||   |||| |||||||||||    
T  13807227 gacaccgacacatattattatattgaattatgtgattttctcaaattgttatcagtgttggcgtgttagt 13807158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 25775575 - 25775494
Alignment:
Q  44 acgtgttcgacaccgacacatattattagactgagttatgtgatt-ttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||| |||||||||||| | | |||| ||||| |||||||||| |||||||||||||||  |||| ||||||| ||||||    
T  25775575 acgtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtc 25775494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 26508166 - 26508085
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||| | | |||| ||||| ||||||||||||||||||||||||   ||||| |||||| ||| ||||| |||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtc 26508085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 8789544 - 8789616
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||||||||| |||| || || |||||||||||| ||||||||| |  |||||||| ||||    
T  8789544 cgtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgt 8789616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 21479177 - 21479068
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||||||||||   | |||| ||||| || |||||||||||||||||||||   ||||||||      ||||| |||||||||| ||||||| ||||||    
T  21479177 cgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggc------gtgtcagtgtcgtgtccggtgtccgtgtccg 21479084  T
Q  151 tctccgtgcttcatag 166  Q
    | ||| ||||||||||    
T  21479083 tatccatgcttcatag 21479068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 38731277 - 38731161
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| | || ||||| |||||||||||||| |||||||||   || ||| | |||  ||||   ||||||||| | ||||| ||||||    
T  38731277 cgacaccgacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgtacatgtcgtgtccgttgtccgtgtccg 38731178  T
Q  151 tctccgtgcttcatagt 167  Q
      |||||||||||||||    
T  38731177 catccgtgcttcatagt 38731161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 4987308 - 4987363
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgt 123  Q
    |||| ||||| ||||||||||||||||||||||||   |||||||||||| |||||    
T  4987308 attacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 168
Target Start/End: Complemental strand, 11658868 - 11658758
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccg 156  Q
    |||||||||| || | ||||| ||||| |||||| ||||||||||||   ||| || |||| |||||||||||||||||  |||||  ||| ||| ||||    
T  11658868 cgacacatataatcacactgaattatgcgattttctcaaattattaacgatgttggtgtgtcagtgtctgtgtcgtgtc-cgtgtctgtgttcgtatccg 11658770  T
Q  157 tgcttcatagtt 168  Q
    |||||| |||||    
T  11658769 tgcttcgtagtt 11658758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 14209172 - 14209094
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||| ||||| | | |||| ||||| |||||||||||||| ||||||||| | ||||||||||| | |||||||||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtg-tcgtgtctgtgtc 14209094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 60 - 143
Target Start/End: Complemental strand, 14618831 - 14618748
Alignment:
Q  60 cacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| ||||| ||||||| |||| | |||||||||   ||||| |||| | |||| | ||||||||||||||||||    
T  14618831 cacatattattacactgaattatgtggttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtcc 14618748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 15314876 - 15314935
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtc 110  Q
    ||||||| |||||||| |||| ||| | ||||||||||||||||||||| |||| |||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtc 15314935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 20503522 - 20503451
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||| | | |||| ||||| |||||| ||||||||||||||||  | |||||||||||| ||||||    
T  20503522 acaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 40993329 - 40993376
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgatttttt 92  Q
    ||||| |||||||||||||||| |||| ||||| ||||||||||||||    
T  40993329 cgtgtccgacaccgacacatataattacactgaattatgtgatttttt 40993376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 11610558 - 11610488
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||||| |||||||||   |||| ||||||| ||| ||||||| ||||||| |||||    
T  11610558 actgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgttgtgtctgatgtcc 11610488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Complemental strand, 14028005 - 14027959
Alignment:
Q  120 gtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||| |||||||||| ||||||| ||||||| ||||||||||||||    
T  14028005 gtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 14027959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 14216951 - 14216865
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    |||||| ||||| | | |||| ||||| |||| |||| |||| ||||||||| | |||||| ||||| |||||| ||||||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtctg 14216865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 137
Target Start/End: Complemental strand, 14223080 - 14222994
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    |||||| ||||| | | |||| ||||| |||| |||| |||| ||||||||| | |||||| ||||| |||||| ||||||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtctg 14222994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 20691377 - 20691327
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||||||||||||| |||| ||||| |||||| ||||| |||||||||||    
T  20691377 gacaccgacacatatgattacactgaattatgtcattttctcaaattatta 20691327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 26492199 - 26492289
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||| ||||||||| || | | |||| ||||| || | |||||||||||||||||||    ||||||||||| |||||| ||||||||||    
T  26492199 cgtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtc 26492289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 28812574 - 28812508
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||| | | | || ||||| ||||||||||| |||||||||||| | ||||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 34185123 - 34185189
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||| | | |||| ||||| || ||||||||||| |||||||||  |||||||||||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 49651786 - 49651848
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggc 113  Q
    |||||||||||| | | |||| | ||| ||||||||||||||||||||||||  |||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcggc 49651848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 29508497 - 29508452
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||| |||| ||||| |||| |||||||||||||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattatta 29508452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 39756267 - 39756222
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||||| |||||||||||  ||||||||||| ||||||    
T  39756267 ttatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc 39756222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 40052363 - 40052318
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||||||||||||||||   |||||||||||| ||||||    
T  40052363 ttatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 49505148 - 49505205
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||| ||||||||| |||| ||| | |||||||||||| |||||||||||    
T  49505148 cgtgtccgacactgacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 2620081 - 2620137
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| |||||| |||| | |||||||||||| |||||| | ||||||||    
T  2620081 ttatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtc 2620137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 5441059 - 5441115
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| ||||||| |||   ||| |||||||| |||||||||||||||||    
T  5441059 ttatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtc 5441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 7171506 - 7171446
Alignment:
Q  106 gtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||| ||| ||| || |||||||||| ||||||  ||||||| ||||||||||||||    
T  7171506 gtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgtgtccgtatccgtgcttcatag 7171446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 9800099 - 9800015
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| ||  |||| || || |||||| ||||| |||||||||||   |||||||||||| |||||  ||||||||||    
T  9800099 cgacaccgacacttacaattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtc 9800015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 12704056 - 12704000
Alignment:
Q  61 acatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||| |||| ||||| ||||||| |||| ||||||||||| | ||||||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgt 12704000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 14979223 - 14979175
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtg 116  Q
    |||| ||||| ||||||||||||||||||||||||   |||||||||||    
T  14979223 attacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 21305277 - 21305229
Alignment:
Q  79 ttatgtgatttttt-caaattattaatcgtgtcggcgtgttagtgtctg 126  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||||    
T  21305277 ttatgtgatttttttcaaattattagaggtgtcggcgtgttagtgtctg 21305229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 51206348 - 51206404
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||| |||||||||||| | |  ||| ||||| ||||||||||||||||||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattatta 51206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 51512232 - 51512280
Alignment:
Q  109 tcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgt 157  Q
    |||| |||||||||||||||||||||||| ||| | ||||||| |||||    
T  51512232 tcggtgtgttagtgtctgtgtcgtgtctgatgttcgtgtccgtatccgt 51512280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 46742 - 46626
Alignment:
Q  50 tcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtcc 149  Q
    ||||||||||||  | | |||| ||||| |||||||||||||||||||||||||  |||||||||||| | |||| |||||||||| | ||||| |||||    
T  46742 tcgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtcc 46643  T
Q  150 gtctccgtgcttcatag 166  Q
    || ||||||||||||||    
T  46642 gtatccgtgcttcatag 46626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 398772 - 398880
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgt 157  Q
    ||||| ||| |||| ||||| ||||||||||||||||||||||||   |||||||||||| |||||| |||||||||| |||||||  |||||| |||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgt 398871  T
Q  158 gcttcatag 166  Q
    |||||||||    
T  398872 gcttcatag 398880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 7918211 - 7918327
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||| ||||||||| |||| ||||| |||||||||||| ||||||||||| |  |||| |||||| | ||||||||||||||| |||||||||||| |    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatgtctg 7918310  T
Q  151 tctccgtgcttcatagt 167  Q
    |  ||||||||||||||    
T  7918311 taaccgtgcttcatagt 7918327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 41877461 - 41877585
Alignment:
Q  42 gcacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    |||||||| |||||||||||| | | |||| ||| | |||||| ||||| |||||||||||   ||||||||||   ||||||||||||||||||||| |    
T  41877461 gcacgtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtat 41877560  T
Q  142 ccatgtccgtctccgtgcttcatag 166  Q
    |||||||||| ||||||||||||||    
T  41877561 ccatgtccgtatccgtgcttcatag 41877585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 47989556 - 47989442
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| |||||||||||||| ||||||||| | |||||||||||| ||||||||||||||||||||| ||| |||| |    
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattattatt-gtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctg 47989458  T
Q  151 tctccgtgcttcatag 166  Q
    | ||| ||||||||||    
T  47989457 tatccatgcttcatag 47989442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 9709885 - 9709762
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||||||| |||| |  || |||||||||||| |||||||||||   |||| ||| ||| |||||| |||||||||||| ||||||    
T  9709885 cgtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtctgatgtcca 9709786  T
Q  145 tgtccgtctccgtgcttcatagtt 168  Q
    |||| || ||||||||||| ||||    
T  9709785 tgtctgtatccgtgcttcacagtt 9709762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 6612171 - 6612286
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| |||||| ||||||||||||||||||  || ||||||||| | |||| |||||||||| ||||| | ||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccg 6612270  T
Q  151 tctccgtgcttcatag 166  Q
    | || |||||||||||    
T  6612271 tatctgtgcttcatag 6612286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 1486709 - 1486823
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| ||| |||| ||||| ||||||||||||||||||||||||   ||||| |||||| ||| || ||||||| || ||| ||| ||||||    
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccg 1486808  T
Q  151 tctccgtgcttcata 165  Q
    | ||| |||||||||    
T  1486809 tatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 166
Target Start/End: Complemental strand, 38503378 - 38503264
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||||||| |||| |||||  ||| ||||||| |||||||||||   ||||||| ||||||||||| ||||| ||||  |||||| |||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgt 38503279  T
Q  152 ctccgtgcttcatag 166  Q
     ||||||| ||||||    
T  38503278 atccgtgcatcatag 38503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 9103703 - 9103585
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccat 145  Q
    |||| |||||||||||| | | |||| ||| | |||||||||||||||||||||||||  |||||||||||| |||||| | ||| |||| ||||| | |    
T  9103703 gtgtccgacaccgacacttgt-attaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcctgtcaggtgttcgt 9103605  T
Q  146 gtccgtctccgtgcttcata 165  Q
    |||| | |||||||||||||    
T  9103604 gtccatatccgtgcttcata 9103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 42359449 - 42359564
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| || |||||||||||||||||||||   ||||| |||||| |||||| |||| ||||  ||||| | ||||||    
T  42359449 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtgtccg 42359548  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  42359549 tatccgtgcttcatag 42359564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 52903316 - 52903229
Alignment:
Q  43 cacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||| |||||||||||||||| |||| ||||| |||| ||||||| | ||||||||||  || |||||||||||||||| |||||    
T  52903316 cacgtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 13997940 - 13997867
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctg 126  Q
    |||||||||||||| |||| ||||| |||||||||||||| |||| |||||  |||||||||||| ||||||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtctg 13997867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 45 - 166
Target Start/End: Original strand, 38078655 - 38078771
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| | | |||| | ||| ||||||||||||||||||||||||   |||||| ||||| |||||     ||||||| |||||||     
T  38078655 cgtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccg 38078749  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    ||||||| ||||||||||||||    
T  38078750 tgtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 148
Target Start/End: Complemental strand, 5944342 - 5944243
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttttt--caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtc 148  Q
    |||||||||||| ||| |||| ||||| ||||||||||||||  ||||||||||   ||| |||||||| ||||||||||||||||| | ||||| ||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtccttgtc 5944243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 157
Target Start/End: Original strand, 10572591 - 10572695
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtc 152  Q
    |||||||||||| | |||| || || |||||||||||| ||||||||||| | |||||||||||| |||||   ||||||||| ||||||| | |||||     
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatccgtg 10572690  T
Q  153 tccgt 157  Q
    |||||    
T  10572691 tccgt 10572695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 5898267 - 5898350
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||| ||||| |||| ||||| |||||||||||||||| |||||||   |||||||||| | |||||||||||| ||||    
T  5898267 gacaccgacgcatataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtc 5898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 22881610 - 22881689
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||| |||||||||||| | | |||| ||| | |||||||||||||||||||||||| | |||||||||||| ||||||    
T  22881610 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 37598896 - 37598818
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||| |||||||||||| ||| |||| ||||| || ||||||||||||||||||||| | |||||||||||| ||||||    
T  37598896 cgtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 37598818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 134
Target Start/End: Original strand, 1864873 - 1864962
Alignment:
Q  44 acgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    |||||| | |||||||||||||| |||| ||||| |||||||||||| ||||||||||||  ||||||| ||  |||| ||||||||||||    
T  1864873 acgtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcggtgt-atagtatctgtgtcgtgt 1864962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 9828103 - 9828037
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||||||  |||| ||||| |||||||||||| ||||||||||| | ||||||||||||    
T  9828103 cgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgt 9828037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 56 - 166
Target Start/End: Original strand, 10577740 - 10577850
Alignment:
Q  56 ccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctcc 155  Q
    ||||||||||| |||| ||||  || ||||||||| | |||  ||||   ||||||||||||  ||||| |||||||||| ||||||| ||||||| |||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatcc 10577839  T
Q  156 gtgcttcatag 166  Q
    |||||||||||    
T  10577840 gtgcttcatag 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 23622370 - 23622304
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||| | |||| |||||||||||||||||||| ||| ||||| | |||||||||||||||||||    
T  23622370 gacacatttaattacactgagttatgtgatttttttaaactattagtggtgtcggcgtgttagtgtc 23622304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 34298478 - 34298380
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||| |||||||||||| ||||||||||| | ||||||| |||| ||| || |||||||||||||||| | |||| || || ||| |||||||    
T  34298478 attacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgtacgtgtctgtatcggtgtttcatag 34298380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 36878519 - 36878441
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||||||| ||| |||| ||||| |||||||||||| |||||||||||   |||||||||||| ||||||| ||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtc 36878441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 5376500 - 5376584
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| | | |||| ||||| |||||| ||||| | |||||||||   ||||||||||||||||||| ||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtc 5376584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 40258934 - 40258994
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcgg 112  Q
    ||||||||||| | | |||| ||||| |||||||||||||||||||||||||| |||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 142
Target Start/End: Original strand, 20157350 - 20157441
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    |||||||||||||||| |||| ||||| |||||||||||| ||| |||||||   ||||||  |||| |||| | |||||||||| ||||||    
T  20157350 cgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtc 20157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 40285654 - 40285769
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    ||||| |||||||||| | || ||||| ||||| |||||| |||||||||||   |||| || |||| ||||||  | ||||| ||||| ||||||| ||    
T  40285654 cgacatcgacacatatgactacactgaattatgcgattttctcaaattattagcggtgttggtgtgtcagtgtccatctcgtgcctggtttccatgttcg 40285753  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  40285754 tatccgtgcttcatag 40285769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 2288164 - 2288251
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||| |||||||||||||||  |||| | ||| |||||||||||| | ||||||||| |  |||||| |||||||||||| |||||||||    
T  2288164 gtgtccgacaccgacacata--attacattgaattatgtgattttcttaaattattattgttgtcggtgtgttagtgtctatgtcgtgtc 2288251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 2896122 - 2896236
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||||||||| ||||   || ||||| |||||||||||| |||||||||||   |||||||||||| |||||| |||| ||||| | ||||| || | ||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtccgtgactgt 2896221  T
Q  152 ctccgtgcttcatag 166  Q
     ||||| ||||||||    
T  2896222 atccgttcttcatag 2896236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 24577186 - 24577252
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||| | | |||| ||||| |||||||||||||||||||||||| | ||||| ||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgt 24577252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 165
Target Start/End: Original strand, 16297300 - 16297397
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    |||| ||||| || ||||||||||||| ||||||    |||||| ||||| ||| || || ||||||| | ||||||||||||| |||||||||||||    
T  16297300 attacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgtccgtatccgtgcttcata 16297397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 40917779 - 40917718
Alignment:
Q  82 tgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||||||||||   |||||||||||| ||| || |||||||||| |||||||    
T  40917779 tgtgattttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtcc 40917718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 44482289 - 44482240
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattat 100  Q
    |||||||||||||||| |||| ||||| |||||||||||| |||||||||    
T  44482289 cgacaccgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 46348377 - 46348462
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||| |||||||||||| | | |||| ||| | |||| |||||||||||||||||||   |||||||||||| |||||| |||||    
T  46348377 cgtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 1815315 - 1815243
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||| | | |||| ||||| |||||||||||||| |||| |||| | |||||||||||| ||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtc 1815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 6427409 - 6427325
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||| |||||||| |||| | ||| |||||||||||| |||||||||||   |||| ||||||| |||||| ||| ||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtc 6427325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 13436524 - 13436444
Alignment:
Q  44 acgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||| ||||||| |||||||| |||| ||||| |||||||||||  | |||||||||   ||||||||||||| |||||    
T  13436524 acgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgttcgtgtc 13436444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 25361945 - 25361881
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgt 115  Q
    |||||| ||||||||| |||| ||||| |||||||||||| ||||||||| | | ||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaattatcagtggtgtcggcgt 25361881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 102
Target Start/End: Complemental strand, 40181935 - 40181879
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||| ||||||||| |||||| |||| ||||| |||||||||||| |||||||||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 609486 - 609573
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||| ||||| ||||||||||| | |||||||||||| |||||   ||||||||| | ||||  ||||||| | ||||||||||||    
T  609486 ttatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcatag 609573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 17754368 - 17754289
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    |||| |||||||||  ||| ||||| |||||| |||||||||||||||||   ||||||| |||| || |||||||||||    
T  17754368 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 17754289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 124
Target Start/End: Original strand, 17831537 - 17831604
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||| |||| ||||| | |||||||||| |||||||||||   |||||||||||| ||||||    
T  17831537 cgacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 101
Target Start/End: Complemental strand, 18337393 - 18337338
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatt 101  Q
    |||| |||||||||||| | | |||| ||||| |||||||||||||||||||||||    
T  18337393 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 38075970 - 38076021
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||||||| |||| ||||| |||||||||||  |||||||||||    
T  38075970 cgacaccgacacatatgattacactgacttatgtgatttactcaaattatta 38076021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 143
Target Start/End: Original strand, 48040499 - 48040554
Alignment:
Q  88 tttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||||||   |||||||||||| |||||| |||||||||| |||||||    
T  48040499 tttttcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcc 48040554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 113358 - 113292
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||||| |||| | | |||| ||||| ||||||||||||||||||||||||   ||||||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 15323194 - 15323124
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtcc 149  Q
    |||||||||||||||||||||||||  || ||| | ||| ||||||  ||||||||| ||||||| |||||    
T  15323194 ttatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtccgtgtcc 15323124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 134
Target Start/End: Original strand, 16927186 - 16927268
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    |||||| ||| |||| |||| ||||| |||| |||||||||||||||||||    || || ||||| ||||||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 165
Target Start/End: Original strand, 31694710 - 31694824
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttttt--caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtc 148  Q
    |||||||||||| | | |||| ||||| ||||||||||||||  ||||||||||    ||||| ||| | |||||||||  |||||| ||||||| | ||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtctgt--cgtgtccggtgtccgtatc 31694807  T
Q  149 cgtctccgtgcttcata 165  Q
    ||| |||||||||||||    
T  31694808 cgtatccgtgcttcata 31694824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 6415002 - 6415110
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||||| | |||| ||||  |||||||||||| |||||| ||||    ||||||||||| ||||||     |||||| ||||| | |||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtc-----cgtgtccggtgttcgtgtccgt 6415096  T
Q  152 ctccgtgcttcata 165  Q
     |||||||||||||    
T  6415097 atccgtgcttcata 6415110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Original strand, 9449025 - 9449066
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgt 109  Q
    |||| ||||| |||||||||||||||||||||||||| ||||    
T  9449025 attatactgaattatgtgattttttcaaattattaatggtgt 9449066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 14332636 - 14332693
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| ||||||||| |||||| |||| ||| | |||||||||||| |||||||||||    
T  14332636 cgtgtccgacaccgagacatataattacactaaattatgtgattttctcaaattatta 14332693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 130
Target Start/End: Complemental strand, 16812580 - 16812523
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||| |||||||||||| ||||||||||| | ||||||| |||| |||||| |||||    
T  16812580 actgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtc 16812523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 18190125 - 18190215
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||| |||||| |||||||||||||||||        || |||| ||| || |||||||||| ||||||||||||||| ||| ||||||||||    
T  18190125 attacactgaattatgtaattttttcaaattatta--------ggtgtgtcagtatccgtgtcgtgtccggtgtccatgtccgtatccatgcttcatag 18190215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 166
Target Start/End: Original strand, 21366042 - 21366135
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||| |||||| ||||||| |||||||||   ||| ||||||||  ||||  |||||||||  ||||| ||||||||| | ||||||||||||    
T  21366042 actgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgttcatgtccgtatgcgtgcttcatag 21366135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 22515881 - 22515938
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||| | | |||| ||| | ||||||||||||||||||||||||    
T  22515881 cgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattatta 22515938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Original strand, 39130762 - 39130859
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||| |||||||||||||||| |||| ||| | |||| | ||||| | ||||||||||| ||||| |||||| | | ||  ||||||||| |||||||    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtcc 39130859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 5927368 - 5927432
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||| |||||||||||||||||||   ||||  |||||| |||||| |||||||||| |||||||    
T  5927368 ttatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtcc 5927432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 14359550 - 14359605
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| |||||||||||   ||||||||||||  ||||||||||||||||    
T  14359550 ttatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtc 14359605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 19058849 - 19058941
Alignment:
Q  44 acgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt-tagtgtctgtgtcgtgtc 135  Q
    |||||| |||||||||||| | | |||| ||||| |||||| || |||| |||||||||   ||||||||||||  ||||| |||||||||||    
T  19058849 acgtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtc 19058941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 21530754 - 21530682
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||||| ||| |||| ||  | |||| ||||||| ||||||||||||  ||||||||||||    
T  21530754 cgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 21530682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 30749904 - 30749860
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgatttt 90  Q
    |||| |||||||||||||||| |||| ||||| ||||||||||||    
T  30749904 gtgtccgacaccgacacatataattacactgaattatgtgatttt 30749860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 30771355 - 30771311
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgatttt 90  Q
    |||| |||||||||||||||| |||| ||||| ||||||||||||    
T  30771355 gtgtccgacaccgacacatataattacactgaattatgtgatttt 30771311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 30847715 - 30847771
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||| |||| ||||||||| |||| | ||| |||||| |||||||||||||||||    
T  30847715 gtgttcaacactgacacatatgattacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 127
Target Start/End: Original strand, 32461491 - 32461539
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgt 127  Q
    |||||||||||||||||||||||| | ||| |||||||| | |||||||    
T  32461491 ttatgtgattttttcaaattattagttgtgccggcgtgtcactgtctgt 32461539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 51 - 95
Target Start/End: Complemental strand, 34371772 - 34371728
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaa 95  Q
    |||||||||||||||| |||| ||||| |||||||||||| ||||    
T  34371772 cgacaccgacacatataattacactgaattatgtgattttctcaa 34371728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 41597525 - 41597585
Alignment:
Q  106 gtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| |||||||  ||||| ||||||||| |||||||| | ||||| ||||||||||||||    
T  41597525 gtgttggcgtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcatag 41597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 135
Target Start/End: Original strand, 48450615 - 48450671
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||| |||||||||||||||||   |||| ||||||| |||||| ||||||||||    
T  48450615 ttatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtc 48450671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 48548017 - 48548077
Alignment:
Q  106 gtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||| | |||| || | ||||| ||||||| ||||||| ||||||||||||||    
T  48548017 gtgtcggcgtgtcattgtccgtattgtgtccggtgtccgtgtccgtatccgtgcttcatag 48548077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 54 - 168
Target Start/End: Complemental strand, 28412404 - 28412292
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtct 153  Q
    ||||||||||||  |||| ||||| |||||||||||| ||||||||||||  |||| | |||||||||||| |||||||||||||||||| ||||| | |    
T  28412404 caccgacacata--attacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtccgtgtccatat 28412307  T
Q  154 ccgtgcttcatagtt 168  Q
     ||||||||||||||    
T  28412306 tcgtgcttcatagtt 28412292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 142
Target Start/End: Complemental strand, 15972938 - 15972841
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    ||||| |||||||||||| | | |||| ||||| || ||| ||||||||||||||||||| |||||||||||| |||||| ||||||| |||||||||    
T  15972938 cgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtc 15972841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 50 - 166
Target Start/End: Complemental strand, 30335477 - 30335361
Alignment:
Q  50 tcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtcc 149  Q
    ||||||||||||  | | |||| ||| | |||||| ||||||||||||||||| | ||||||||||| ||||||| ||||||||||||   ||| |||||    
T  30335477 tcgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtctgagatccgtgtcc 30335378  T
Q  150 gtctccgtgcttcatag 166  Q
    || ||||||||||||||    
T  30335377 gtatccgtgcttcatag 30335361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Original strand, 34784982 - 34785097
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||| | |||||||||||| | |||  |||| | ||||||| |||| |||||| ||||||||||||| |||| ||||||    
T  34784982 cgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccg 34785081  T
Q  151 tctccgtgcttcatag 166  Q
    | || |||||||||||    
T  34785082 tatctgtgcttcatag 34785097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 132
Target Start/End: Complemental strand, 18422027 - 18421941
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    ||||||||||||||||| | | |||| ||||| ||||||||| |||| ||||||||||| |||||||||||| |||||| |||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgt 18421941  T

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Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 23058442 - 23058556
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttt-ttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtcc 149  Q
    |||||||||||| | | |||| ||||  |||||||||||| |||||||||||||| |||| ||||||| | |||| |||||||||| ||| ||| |||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccgtgtcgtgtcaggtatccgtgtcc 23058541  T
Q  150 gtctccgtgcttcat 164  Q
    || ||||||||||||    
T  23058542 gtgtccgtgcttcat 23058556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 30404844 - 30404934
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||| |||| ||||||| | | |||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||| ||||| ||||    
T  30404844 cgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtc 30404934  T

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Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 52 - 165
Target Start/End: Complemental strand, 18276579 - 18276466
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||||||||||| || |||| ||||| ||| |||||||| |||||||||||   |||||||| | | ||||||||| ||||||| ||||||| |||| ||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtccgtgtctgt 18276480  T
Q  152 ctccgtgcttcata 165  Q
     |||||||||||||    
T  18276479 atccgtgcttcata 18276466  T

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Target: chr2; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 59 - 164
Target Start/End: Complemental strand, 21616813 - 21616708
Alignment:
Q  59 acacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtg 158  Q
    |||||||| |||| ||||| |||||||||||| |||||||||||   ||||||||||||  ||||| ||||||||||  |||||  ||||||| ||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtg 21616714  T
Q  159 cttcat 164  Q
    ||||||    
T  21616713 cttcat 21616708  T

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Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 21374716 - 21374811
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagt 167  Q
    |||| ||||| |||||| |||||||||||||||||   |||||||||||||||||||     |||||| ||||||| ||||||| |||||||||||||||    
T  21374716 attacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtc-----cgtgtccggtgtccgtgtccgtatccgtgcttcatagt 21374810  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 15657923 - 15657816
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||  | | |||| ||||| ||||||||||||| |||||||||| | | ||||||||||||||||| |||||||||| |||| || |||| |    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtgaccgtgtcgg 15657824  T
Q  151 tctccgtg 158  Q
    | ||||||    
T  15657823 tgtccgtg 15657816  T

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Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 143
Target Start/End: Original strand, 19536391 - 19536490
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgatttt-ttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||| | | |||| ||||| |||||||||||| |||||||||||| | |||||||||||| | |||| |||||||||| |||||||    
T  19536391 cgtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 19536490  T

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Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 36756344 - 36756425
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    |||||||||||| ||| |||| ||||| |||||| |||| |||||||||||| | |||||| ||||| ||||||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgt 36756425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 20242722 - 20242813
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    |||| |||||||||||||||| |||| ||||| |||||||||||| | |||  |||| | |||||||||||| ||||||  |||||||||||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtctg 20242813  T

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Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 129
Target Start/End: Original strand, 12668423 - 12668501
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgt 129  Q
    |||||||||||| ||| |||| ||||| |||||| ||||||||||||||||| |  ||||||||||| ||| |||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagtatctgtgt 12668501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 166
Target Start/End: Complemental strand, 26769540 - 26769461
Alignment:
Q  81 atgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||| |||||||||||||| | ||||||||||||      |||||||||||| ||||||| ||||||| ||||||||||||||    
T  26769540 atgtgatattttcaaattattagttgtgtcggcgtgt------ctgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcatag 26769461  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 31284079 - 31283989
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagttg 169  Q
    |||||||||||| |||||||||||   |||||||||||| |||||  ||||  |||| ||||||| ||||||| || ||||||||||||||    
T  31284079 ttatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcatagttg 31283989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 5473393 - 5473336
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| ||||||||||||||| ||||| || || ||||||||||||||||||||||||    
T  5473393 cgtgtccgacaccgacacataatattacaccgaattatgtgattttttcaaattatta 5473336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 21782820 - 21782902
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||| ||||||  |||| ||||| |||||||||||| |||||||||||   |||||||||||| ||||| |||||||||||    
T  21782820 cgacaccggcacata--attacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtc 21782902  T

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Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 37411238 - 37411323
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||||||| |||||||||| || | ||||| |||||||||||| |||||||||||   |||||||| ||| || |||||||||    
T  37411238 cgtgttcgacatcgacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 148
Target Start/End: Complemental strand, 31018658 - 31018552
Alignment:
Q  42 gcacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    |||||||| |||||||||||| ||| |||| ||| | | |||||||||| | |||||||||   |||| ||||||| ||||||  |||||| || |||||    
T  31018658 gcacgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtccatgtcgtatccggtgt 31018559  T
Q  142 ccatgtc 148  Q
    |||||||    
T  31018558 ccatgtc 31018552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 40361755 - 40361869
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||||| ||| |||| |||| ||| | |||||| ||||||||||||||||||| |||||   ||||  || ||||||||||||  ||| ||| |||||||    
T  40361755 gacaccaacagatataattacactaaattatgtaattttttcaaattattaatagtgtcatagtgtccgtatctgtgtcgtgttcggtatccgtgtccgt 40361854  T
Q  152 ctccgtgcttcatag 166  Q
     ||| ||||||||||    
T  40361855 atccatgcttcatag 40361869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 46 - 146
Target Start/End: Complemental strand, 896275 - 896177
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccat 145  Q
    |||| |||| ||||||||||| |||| | |||  ||||||||||| ||||| |||||   |||||||||||| ||||  ||||||||||| |||||||||    
T  896275 gtgtccgacgccgacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtg--tgtgtcgtgtccggtgtccat 896178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 5367257 - 5367200
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||||| |||||||||||  |||||||||||    
T  5367257 cgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 134
Target Start/End: Original strand, 10535765 - 10535842
Alignment:
Q  57 cgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    |||||| ||| |||| ||||| |||||| ||||| |||||||||||   |||||||||| ||||| ||||||||||||    
T  10535765 cgacacttatgattacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgt 10535842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 12940952 - 12941021
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    |||| ||||| |||| ||||||||||||||||||| | |||||  ||||| |||||| ||||||||||||    
T  12940952 attacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtctg 12941021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 21624334 - 21624233
Alignment:
Q  43 cacgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaa-ttattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgt 141  Q
    ||||||| |||||||||||| | | |||| ||||| |||||  ||||||| ||| ||||||   |||||||||||| ||||||||||||||||  |||||    
T  21624334 cacgtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgt 21624235  T
Q  142 cc 143  Q
    ||    
T  21624234 cc 21624233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 23718082 - 23718001
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||||||| |||| ||||| |||||||| ||| |||||||||||   ||||||| |||| |||||| ||||| ||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 23718001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 24105754 - 24105673
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||||||| |||| ||||| |||||||| ||| |||||||||||   ||||||| |||| |||||| ||||| ||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtc 24105673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 34337204 - 34337289
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcat 164  Q
    |||||||||||||||||||||| ||  |||||||||||| | |||| ||||||| |  ||| ||| ||||||| |||||| |||||    
T  34337204 ttatgtgattttttcaaattatcaactgtgtcggcgtgtcaatgtccgtgtcgtatacggtatccgtgtccgtatccgtgattcat 34337289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 34691799 - 34691856
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||||||||    
T  34691799 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34691856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 34714211 - 34714268
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||||| |||| ||||||| |||||||||||    
T  34714211 cgtgtccgacaccgacacatataattacactgaattatatgattttatcaaattatta 34714268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 165
Target Start/End: Complemental strand, 44860379 - 44860273
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||||| ||||| |||||| |||||||||||        |  |||| |||||| |||||||||||||||| | | ||||    
T  44860379 cgacaccgacacatataattacactgaattatgcgattttctcaaattatta--------gcggtgtcagtgtccgtgtcgtgtctggtgtacgtatccg 44860288  T
Q  151 tctccgtgcttcata 165  Q
    | |||||||||||||    
T  44860287 tatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 2438713 - 2438833
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| | | |||| ||||| |||||||||||||| |||||||||   ||||| ||  || |||||| ||||  |||| ||||| |     
T  2438713 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagc--gtcagtgtccgtgttttgtccggtgt-cg 2438809  T
Q  145 tgtccgtctccgtgcttcatagtt 168  Q
    ||||||| ||||||||||||||||    
T  2438810 tgtccgtatccgtgcttcatagtt 2438833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 137
Target Start/End: Complemental strand, 20473387 - 20473295
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    ||||| ||||| |||||| | | |||| ||||| |||| ||| ||||| ||||||||| | |||||||| ||| ||||||||||||| |||||    
T  20473387 cgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtgtctgtgtcgagtctg 20473295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 135
Target Start/End: Original strand, 20539674 - 20539758
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| | | |||| ||| | |||| |||||||||||||||||||   |||||| ||||| |||||| ||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtc 20539758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 28677967 - 28677904
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgt 115  Q
    ||||||||| |||||| |||| ||||| ||||||||||||||||||||||||   ||||||||||    
T  28677967 cgacaccga-acatataattacactgaattatgtgattttttcaaattattagcggtgtcggcgt 28677904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 35449565 - 35449489
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    ||||||||| |||| ||||| || ||||||||| ||||||||||||  |||| ||| ||| ||||| ||||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtgt 35449489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 135
Target Start/End: Original strand, 18841014 - 18841097
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||||| | | |||| ||| | |||||| ||||||||||||||||| | ||||| |||||| ||||||  |||||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtc 18841097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 31808142 - 31808063
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||| |||| ||||||||| |||| ||||| |||||||||||| | |||||||||   ||||||| |||| ||||||    
T  31808142 cgtgttcaacactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 130
Target Start/End: Complemental strand, 37559036 - 37558957
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||||||||| | | |||| | ||| ||||||||||||| ||||||||||   |||||||||||| |||||| |||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 16069271 - 16069333
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||| ||||| |||| ||||||||| ||||||||||  |||||||||||| |||||| |||||    
T  16069271 attacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 18889592 - 18889642
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||| ||||||    
T  18889592 gacaccgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 137
Target Start/End: Original strand, 36409630 - 36409713
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    ||||||||||||||  |||| ||| | |||||||||||||||||||||| |   |||||||| ||| ||| || ||||||||||||    
T  36409630 gacaccgacacata--attacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtctg 36409713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 2331851 - 2331773
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcg 131  Q
    |||||||||||||||  | || ||||| |||||||||||| ||||||||||||| ||||  |||||| | |||| ||||||    
T  2331851 cgacaccgacacata--aatacactgaattatgtgattttctcaaattattaatggtgtttgcgtgtcaatgtccgtgtcg 2331773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 11670786 - 11670733
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    |||||||||||||||||||||||| | | |||| ||||| ||||||| ||||||    
T  11670786 ttatgtgattttttcaaattattagtggcgtcgacgtgtcagtgtctatgtcgt 11670733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 18571037 - 18570980
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||| ||||||||| |||| | ||| |||||| ||||| |||||||||||    
T  18571037 cgtgttcgacactgacacatatgattacattgaattatgtcattttctcaaattatta 18570980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 17442231 - 17442175
Alignment:
Q  119 agtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagttggcaaca 175  Q
    ||||||||||| || || ||||||||||||||| |||||||| | | ||||||||||    
T  17442231 agtgtctgtgttgtatccggtgtccatgtccgtatccgtgctaccttgttggcaaca 17442175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 18631462 - 18631514
Alignment:
Q  114 gtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||||||| |||||||||| ||||||| ||| ||| || |||||||||||    
T  18631462 gtgttagtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcatag 18631514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 24894426 - 24894370
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgt 129  Q
    ||||| |||||||||||||| |||||||||   |||||||||||| |||||| ||||    
T  24894426 actgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 30471093 - 30471005
Alignment:
Q  55 accgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| |||| |  || |||||||||||| ||||| |||||   || || ||||| ||||| |||||||||||||| |||||    
T  30471093 accgacacatataattacatcgaattatgtgattttctcaaaatattaggagtatcagcgtgctagtgcctgtgtcgtgtctgatgtcc 30471005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 38117188 - 38117232
Alignment:
Q  80 tatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||||||||||||||   |||||||||||| ||||||    
T  38117188 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 39279732 - 39279668
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||||||||||||| |||| ||||| |||| ||||||| ||| ||||||||  |||| |||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgt 39279668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 13287399 - 13287509
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | |  ||| ||||| ||||||||||||||||||||||||   |||||| |||||||||||| |||||||||| ||||||| ||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtccgtgtccg 13287498  T
Q  151 tctccgtgctt 161  Q
    | |||||||||    
T  13287499 tatccgtgctt 13287509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 79 - 164
Target Start/End: Complemental strand, 41995502 - 41995417
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcat 164  Q
    ||||||||||||||| |||||||| | |||||||||||| |||||||||||||| ||  |||||| ||||||| ||||||||||||    
T  41995502 ttatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 21522809 - 21522694
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||  | | |||| ||||| |||||| ||||||| |||||||||   |||||||||||| |||||| |||||||||| |||| || ||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21522710  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  21522709 tatccgtgcttcatag 21522694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 21533375 - 21533260
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||  | | |||| ||||| |||||| ||||||| |||||||||   |||||||||||| |||||| |||||||||| |||| || ||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21533276  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  21533275 tatccgtgcttcatag 21533260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 15382538 - 15382421
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatttttt--caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtc 148  Q
    |||||||||||| | | |||| ||||| |||| |||||||||  ||||||||||   |||||||||||| | |||| |||||||||| ||||||| ||||    
T  15382538 cgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtc 15382439  T
Q  149 cgtctccgtgcttcatag 166  Q
    ||| ||||||||||||||    
T  15382438 cgtatccgtgcttcatag 15382421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 21191051 - 21191156
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccat 145  Q
    |||| |||||||||||| | | |||| ||||| ||||||||||||||||||||||||   |||||||| ||| |||||| |||||||||| ||||||  |    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtcagt 21191150  T
Q  146 gtccgt 151  Q
    ||||||    
T  21191151 gtccgt 21191156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 21542089 - 21541984
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| ||||| |||||| || |||| ||||||||| | |||||||| ||| | ||||||||||||||||||||||| ||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtccgtgtccg 21541990  T
Q  151 tctccg 156  Q
    | ||||    
T  21541989 tatccg 21541984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 19293431 - 19293518
Alignment:
Q  59 acacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatg 146  Q
    |||||||| |||| ||| | |||||| ||||| | ||||||||| | ||||| ||||||| |||||||||||||||||||||||||||    
T  19293431 acacatatgattacacttaattatgttattttcttaaattattattggtgtcagcgtgttggtgtctgtgtcgtgtctggtgtccatg 19293518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 6247687 - 6247589
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||| | | |||| ||||| ||||||||||||||||||||||||   |||||||||||| |||||  || ||||||| |||||||    
T  6247687 cgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtcc 6247589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 15410450 - 15410563
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtc 152  Q
    ||||| |||||||| |||| ||||| | || | ||||| | |||||||||   |||||||||||| |||||| |||||||||||| |||||| ||||||     
T  15410450 acaccaacacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgtccacgtccgta 15410549  T
Q  153 tccgtgcttcatag 166  Q
    |||||| |||||||    
T  15410550 tccgtgtttcatag 15410563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 19552571 - 19552626
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    |||||||||||||||||||||||||  |||||||||||| |||||| |||||||||    
T  19552571 ttatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgt 19552626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 166
Target Start/End: Original strand, 36642763 - 36642876
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    ||||||||||| |||  ||| ||| |  ||||| | ||||||||||||||||  |||||||||||| |||||| |||||||||| ||||| | |||||||    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgt-cttgtccgt 36642861  T
Q  152 ctccgtgcttcatag 166  Q
     ||| ||||||||||    
T  36642862 atccatgcttcatag 36642876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 168
Target Start/End: Complemental strand, 6401557 - 6401440
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||||  || ||||||||| | |||   ||| | ||||||||||||  ||||| |||||| ||| ||||||| |||| |    
T  6401557 cgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtccgtgtctg 6401458  T
Q  151 tctccgtgcttcatagtt 168  Q
    | ||||||||||||||||    
T  6401457 tatccgtgcttcatagtt 6401440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 3751938 - 3752025
Alignment:
Q  59 acacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgt 147  Q
    |||||||| |||| ||| |||||||||||||| ||||||||||| | |||||| | |||||||||  |||||||||| ||| |||||||    
T  3751938 acacatataattatacttagttatgtgattttctcaaattattagt-gtgtcgacttgttagtgttcgtgtcgtgtccggtatccatgt 3752025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 180
Target Start/End: Complemental strand, 6770606 - 6770473
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||| ||||||||  | || ||||| |||||||||||| | ||||||||| | ||||| | |||| |||||| ||||| |||  |||||||     
T  6770606 cgtgtccgacactgacacata--agtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccg 6770509  T
Q  145 tgtccgtctccgtgcttcatagttggcaacatatat 180  Q
    | ||||| |||||||||||||| | |||||| ||||    
T  6770508 tatccgtatccgtgcttcataggttgcaacacatat 6770473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 17925167 - 17925223
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||||||||||||||||| | ||| |||||||||||| | |||||||||    
T  17925167 gtgttcgacaccgacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 28588668 - 28588740
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||||| ||| |||| ||||| |||||||||||| |||||||||||   ||||||||||||    
T  28588668 cgtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgt 28588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 30135372 - 30135288
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgatttttt-caaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    ||||||||||| | | |||| | |||||||||||||||||| |||||||||| | ||||||||||||  || |||||||||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtc 30135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 130
Target Start/End: Original strand, 16203795 - 16203874
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||||||||||||||| |||| ||| | ||||| |||||| |||||||||||   |||||||| |||||||||| |||||    
T  16203795 cgacaccgacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtc 16203874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 30183608 - 30183493
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| | | |||| || || | ||||||| |||||||||||||| | |||||||| | | ||||||||| | |||||| |||||  ||||||    
T  30183608 cgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcggcatatcagtgtctgtattgtgtctagtgtctgtgtccg 30183509  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||| ||||||||    
T  30183508 tatccgtccttcatag 30183493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 166
Target Start/End: Original strand, 17177056 - 17177138
Alignment:
Q  84 tgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||||||||||   |||| ||||| | |||||| | ||||| |||||||||  ||||||| ||||||||||||||    
T  17177056 tgattttttcaaattattagctgtgttggcgtatcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcatag 17177138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 3966562 - 3966489
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||||||| |||| ||||| || ||||||||| |||||||||||   |||||||| ||| ||||||    
T  3966562 cgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtc 3966489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 10298600 - 10298555
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||    
T  10298600 ttatgtgactttttcaaattattagttgtgtcggcgtgttagtgtc 10298555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 30502382 - 30502439
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||||| ||| |||||||| |||||||||||    
T  30502382 cgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 30542725 - 30542782
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| |||||||||||||||| |||| ||||| ||| |||||||| |||||||||||    
T  30542725 cgtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 16374342 - 16374418
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgt 127  Q
    |||||||||||||| | |||| ||||| |||||| |||||||  |||||||||   ||||| |||||||||||||||    
T  16374342 cgacaccgacacatgtaattacactgatttatgttatttttttcaattattaacgatgtcgacgtgttagtgtctgt 16374418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 22013445 - 22013381
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||| |||||| ||||||||||   |||||||||||| |||||| |||||||||| |||||||    
T  22013445 ttatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcc 22013381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 27144515 - 27144443
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||||| |||| ||| | |||||||||||  |||||||||||   |||||||||||| ||||||||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 37328844 - 37328944
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||| | |||| ||||| || |||||||||| |||||||||    ||||||| || | |||||| |||||||||  ||||||| ||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtccgtgtccg 37328943  T
Q  151 t 151  Q
    |    
T  37328944 t 37328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 6471889 - 6471940
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||||| |||||||| |||| ||||| |||||||||||| |||||||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 130
Target Start/End: Complemental strand, 14674300 - 14674249
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    ||||||||||||||||||||||||   |||||||||||| |||||| |||||    
T  14674300 ttatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 19579732 - 19579645
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||||||||| |||||||||||   |||||||||| | |||||| |||| || || ||||||  ||| ||| ||||||||||||||    
T  19579732 ttatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtcggtgtacgtatccgtgcttcatag 19579645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 134
Target Start/End: Original strand, 22423812 - 22423895
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgt 134  Q
    ||||||||||| |||| |||| | ||| |||||||||||| ||||||||||| | ||||| | |||| ||| || |||||||||    
T  22423812 cgacaccgacatatataattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 33178089 - 33178018
Alignment:
Q  46 gtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||| |||||||||||| | | |||| ||| | |||||||||||||| ||||||||| | ||||||||||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 73 - 132
Target Start/End: Original strand, 40000557 - 40000616
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    ||||| |||||||||||||||||||||||||  |||||| | ||| |||||| |||||||    
T  40000557 actgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtgtcgt 40000616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 166
Target Start/End: Original strand, 6326314 - 6326412
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||| ||||| |||||| ||||| |||||||| ||    ||||||||||| |||||| |||||||||| ||| ||| ||||| | ||| ||||||||||    
T  6326314 attacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcatag 6326412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 2436981 - 2436908
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||||||||||||| || | |  || ||||||||||||| ||||||||||   |||||||||||| ||||||    
T  2436981 cgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 102
Target Start/End: Original strand, 21576739 - 21576796
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    ||||| ||||| |||||| | | |||| ||||| ||||||||||||||||||||||||    
T  21576739 cgtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattatta 21576796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 24906305 - 24906390
Alignment:
Q  55 accgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtg 140  Q
    |||||||| | | |||| ||||| |||||| |||||||||||||||||   |||| ||||||| |||||  |||||||||| ||||    
T  24906305 accgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 31084354 - 31084309
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||||||||||||||||   |||||||||||| ||||||    
T  31084354 ttatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 34276846 - 34276801
Alignment:
Q  121 tgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    ||||||||||||||| ||| ||| ||||||| ||||||||||||||    
T  34276846 tgtctgtgtcgtgtccggtatccgtgtccgtatccgtgcttcatag 34276801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 34879415 - 34879362
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaatt 98  Q
    ||||| ||||| ||||||||||||||| ||||| |||| ||||||| |||||||    
T  34879415 cgtgtccgacatcgacacatattattacactgaattatatgattttctcaaatt 34879362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 39698600 - 39698527
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    |||||| ||||| | | |||| ||||| ||||||||||||||||||||||||   ||||| |||||| ||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtc 39698527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 131
Target Start/End: Complemental strand, 9449500 - 9449448
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcg 131  Q
    |||||||||||| ||||||||||| | |||||||||||  |||||| ||||||    
T  9449500 ttatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 18288058 - 18288141
Alignment:
Q  58 gacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtc 142  Q
    ||||| ||| |||| ||||||||| || ||||| |||||||||||  |||||| |||| |  ||||||||| |||||||||||||    
T  18288058 gacacctatgattatactgagttaagtcattttctcaaattattatccgtgtcagcgtctcggtgtctgtg-cgtgtctggtgtc 18288141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 18607166 - 18607202
Alignment:
Q  131 gtgtctggtgtccatgtccgtctccgtgcttcatagt 167  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  18607166 gtgtctgatgtccatgtccgtgtccgtgcttcatagt 18607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 21351906 - 21351978
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||| | | |||| ||||| |||||||| |||||| |||||||| | ||||||| |||| ||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtc 21351978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 42029817 - 42029745
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| ||||||||| |||||| |||| | ||| |||||||||||| | || || ||||| ||||||||||||    
T  42029817 cgtgtccgacaccgatacatataattacattgaattatgtgattttctaaattttttaattgtgtcggcgtgt 42029745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 166
Target Start/End: Complemental strand, 8863 - 8742
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| | | |||| ||| | | || |||||||||||||||||||   |||||||||||| |||||| |||||||||| |||||||     
T  8863 cgtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccg 8764  T
Q  145 tgtccgtctccgtgcttcatag 166  Q
    ||||||| ||| ||||||||||    
T  8763 tgtccgtatccatgcttcatag 8742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 167
Target Start/End: Complemental strand, 130538 - 130425
Alignment:
Q  54 caccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtct 153  Q
    ||||||||| | | |||| ||||| |||||||||||||||||| ||||||  |||||||| ||| | |||| |||||||||| ||||||| ||||||| |    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtat 130439  T
Q  154 ccgtgcttcatagt 167  Q
    || |||||||||||    
T  130438 ccatgcttcatagt 130425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 21098 - 21010
Alignment:
Q  55 accgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||||||||| |||| || || |||||||||||| |||||||||||| |||||| || ||| |||||| ||||||||||||||||||    
T  21098 accgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtcc 21010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 456 - 575
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcca 144  Q
    ||||| |||||||||||| | | |||| ||||| || |||||||||||||||||||||   |||||||||| | |||||| ||| |||||  |||||||     
T  456 cgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccg 555  T
Q  145 tgtccgtctccgtgcttcat 164  Q
    ||||||| ||||||||||||    
T  556 tgtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 168
Target Start/End: Original strand, 3849 - 3971
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtct-----gtgtcgtgtctggtgtccat 145  Q
    |||||| ||||| | | |||| ||||| |||||||||||||| |||||||||| ||||||||| | | |||||||     |||||||||||||||||| |    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtcgtgtctggtgtccgt 3948  T
Q  146 gtccgtctccgtgcttcatagtt 168  Q
    |||| | ||||||||||||||||    
T  3949 gtccatatccgtgcttcatagtt 3971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 132
Target Start/End: Original strand, 135312 - 135393
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    |||||||||||||||| |||| || || |||||||||||| |||||||||||   ||||||| ||||| |||||||||||||    
T  135312 cgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtcgt 135393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 20231 - 20139
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    |||||| ||||| | | |||| ||||| ||||||||||||||||||||||||   |||||||||||| | |||| |||||||||| |||||||    
T  20231 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtcc 20139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 23479 - 23395
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||||||||| ||| |||| ||||| ||||||||||||||  | ||||||   |||||||||||| |||||||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtc 23395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 135
Target Start/End: Complemental strand, 23570 - 23485
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgatt-ttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||||| ||||| ||| |||| ||||| |||||||||| |||| || |||||||  ||||||| |||| ||||| |||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgtatgtgtcgtgtc 23485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 73 - 165
Target Start/End: Complemental strand, 19181 - 19090
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcata 165  Q
    ||||| |||||| ||||||| |||||||||| | |||||||||||||||||| ||||| | |||| ||||| |||| || |||||||||||||    
T  19181 actgaattatgtcatttttt-aaattattaaccatgtcggcgtgttagtgtccgtgtcatatctgatgtccgtgtctgtgtccgtgcttcata 19090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 178835 - 178919
Alignment:
Q  68 attagactgagttatg-tgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgt 151  Q
    |||| ||||| ||||| ||||||||||||||||||| | |||||||||||| |||||| |||||||||| |||||| || |||||    
T  178835 attacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcaatatccgt 178919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 192277 - 192335
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctg 137  Q
    |||||| ||||| ||||||||||||  |||||||||||| |||||| || |||||||||    
T  192277 ttatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtctg 192335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 241653 - 241561
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||||||||||  || |||| ||| | ||||||||||||| ||||||||||   |||||||||||| |||||| |||||||||| |||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtcc 241561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 90901 - 90818
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||| ||||| |||| |||| ||||| |||| ||||||| ||||||||||||| |||| || |||| |||||||||||||||||    
T  90901 gacatcgacatatataattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtc 90818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 166
Target Start/End: Original strand, 225296 - 225383
Alignment:
Q  79 ttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatag 166  Q
    |||||| ||||| |||||||||||   |||||||||||| |||||| |||||||||| ||||||| |||| || |||||| |||||||    
T  225296 ttatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtgtctgtgtccgtgtttcatag 225383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 70343 - 70259
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgt 129  Q
    ||||| |||||||||||| ||| |||| ||||| |||||| ||||||||||||||||||  |||||| | |||  ||||||||||    
T  70343 cgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 9957 - 9842
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||||||| |||| ||||  || | ||||||| | |||  ||||   ||||||||||||  |||||  ||||||||| ||||||| ||||||    
T  9957 cgacaccgacacatataattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccg 9858  T
Q  151 tctccgtgcttcatag 166  Q
    | ||||||||||||||    
T  9857 tatccgtgcttcatag 9842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Complemental strand, 13437 - 13367
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||| ||||||||||| | |||||||||||| |||||| ||||| | || |||||||    
T  13437 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtcc 13367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 143
Target Start/End: Original strand, 21890 - 21960
Alignment:
Q  73 actgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtcc 143  Q
    ||||| |||||||||||| ||||||||||| | |||||||||||| |||||| ||||| | || |||||||    
T  21890 actgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtcc 21960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 123
Target Start/End: Complemental strand, 28907 - 28837
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgt 123  Q
    |||||||||||||| |||| | ||| ||||| |||||| | ||||||||||  ||||||||||||||||||    
T  28907 acaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgt 28837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 130
Target Start/End: Complemental strand, 51853 - 51791
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtc 130  Q
    |||| ||||| ||||||||||||||||||||||||   |||||||||||| |||||| |||||    
T  51853 attacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 14572 - 14523
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    |||| ||||| |||||||||||||||||||||||| | ||||||||||||    
T  14572 attacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 17750 - 17822
Alignment:
Q  52 gacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtc 124  Q
    ||||||||||| | | |||| ||| | |||||||||||||||||||||||| | ||||| |||||||| ||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtc 17822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 132
Target Start/End: Complemental strand, 1092 - 1013
Alignment:
Q  53 acaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgt 132  Q
    |||| |||||||||  ||| ||||| |||||| |||||||||||||||||   ||||||| |||| || |||||||||||    
T  1092 acactgacacatatagttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgt 1013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 68 - 135
Target Start/End: Complemental strand, 19617 - 19551
Alignment:
Q  68 attagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtc 135  Q
    |||| ||||| ||||||||||||| |||||||||| | || ||||||||| |||||| ||||||||||    
T  19617 attacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtc 19551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 9747 - 9798
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattatta 102  Q
    |||||||||||||||| |||| ||||| ||| |||||||| |||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 8725 - 8619
Alignment:
Q  51 cgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgttagtgtctgtgtcgtgtctggtgtccatgtccg 150  Q
    |||||||||||| ||| |||| |||||  |||||||||||   |||||||||   |||||| ||||| ||||||  ||||||||| ||||||| |||| |    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtccgtgtcgg 8626  T
Q  151 tctccgt 157  Q
    | |||||    
T  8625 tgtccgt 8619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 8074 - 8003
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||||| | | |||| ||||  |||| ||||||||||||||||||| | ||||||||||||    
T  8074 cgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 117
Target Start/End: Complemental strand, 1709 - 1637
Alignment:
Q  45 cgtgttcgacaccgacacatattattagactgagttatgtgattttttcaaattattaatcgtgtcggcgtgt 117  Q
    ||||| |||||||||||| ||| |||| ||  | |||| ||||||| ||||||||||||  ||||||||||||    
T  1709 cgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattattaacggtgtcggcgtgt 1637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 5026 - 5082
Alignment:
Q  119 agtgtctgtgtcgtgtctggtgtccatgtccgtctccgtgcttcatagttggcaaca 175  Q
    |||||||||||||| |||| ||||| ||||||| |||||||| | | ||||||||||    
T  5026 agtgtctgtgtcgtatctgatgtccgtgtccgtatccgtgctaccttgttggcaaca 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 113 - 157
Target Start/End: Complemental strand, 15052 - 15008
Alignment:
Q  113 cgtgttagtgtctgtgtcgtgtctggtgtccatgtccgtctccgt 157  Q
    ||||| |||||| |||||||||||||||||| ||||||| |||||    
T  15052 cgtgtcagtgtccgtgtcgtgtctggtgtccgtgtccgtgtccgt 15008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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