View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11058_low_19 (Length: 263)
Name: NF11058_low_19
Description: NF11058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11058_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 51252648 - 51252877
Alignment:
| Q |
16 |
aacagagtgacattttctgagtactatatactataacctttcttatcttctctctgtactccttgagcttccaaaaatcataaaaggcgaaacccaattg |
115 |
Q |
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| T |
51252648 |
aacagagtgacattttctgagtactata--ctataacctttcttatcttctctctgtactccttcagcttccaaaaatcataaaaggcgaaacccaattg |
51252745 |
T |
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| Q |
116 |
aggaatggaagggttaacagggcttagtcacctatttgtgacaatgtttctagcagggtttggaggaattatagttatgccttcaataacagatgtcacc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51252746 |
aggaatggaagggttaacagggcttagtcacctatttgtgacaatgtttctagcagggtttggaggaattatagttatgccttcaataacagatgtcacc |
51252845 |
T |
|
| Q |
216 |
atggctgcactttgtcctggtcaagatgaatg |
247 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
51252846 |
atggctgcactttgtcctggtcaagatgaatg |
51252877 |
T |
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