View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11060_high_5 (Length: 253)
Name: NF11060_high_5
Description: NF11060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11060_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 29007349 - 29007114
Alignment:
| Q |
1 |
tgttcttgtgcagatgagggtcgtttgggtgttccattgattacactcgtaatcatccgagctttcgcttggtcttannnnnnngttcacctttcagcta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |
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| T |
29007349 |
tgttcttgtgcagatgagggtcgtttgggtgttccattgattacactcgtaatcatcttagctttcgcttggtcttctttttttgttcacctttcagcta |
29007250 |
T |
|
| Q |
101 |
tcaactagctagctcacactagacagtttatttcactgatgtgggtgtttggtcatttataatgacatattgtttagtacatatagattgtgatttggtt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
29007249 |
tcaactagctagctcacactagacagtttatttcactgatgtgggtgtttggtcattcataatgacatattgtttagtacatatagattgtgatttggtt |
29007150 |
T |
|
| Q |
201 |
tagtgactttagtcaattgttccaaagtgagtgatg |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
29007149 |
tagtgactttagtcaattgttccaaagtgagtgatg |
29007114 |
T |
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