View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11060_low_10 (Length: 211)

Name: NF11060_low_10
Description: NF11060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11060_low_10
NF11060_low_10
[»] chr1 (20 HSPs)
chr1 (7-195)||(41394422-41394610)
chr1 (58-195)||(37844374-37844513)
chr1 (58-195)||(20913230-20913367)
chr1 (58-195)||(20931545-20931682)
chr1 (58-195)||(20445879-20446019)
chr1 (58-195)||(20893551-20893689)
chr1 (58-195)||(20531644-20531783)
chr1 (10-90)||(21860334-21860414)
chr1 (16-90)||(44034829-44034903)
chr1 (10-90)||(41218728-41218808)
chr1 (17-88)||(27675120-27675191)
chr1 (132-194)||(51452693-51452755)
chr1 (17-74)||(13376711-13376768)
chr1 (17-74)||(20177513-20177570)
chr1 (57-90)||(45051726-45051759)
chr1 (59-90)||(15861327-15861358)
chr1 (144-196)||(5072388-5072440)
chr1 (149-189)||(16646118-16646158)
chr1 (144-196)||(18601118-18601170)
chr1 (58-90)||(51452809-51452841)
[»] chr3 (52 HSPs)
chr3 (7-194)||(16743990-16744177)
chr3 (10-195)||(19231981-19232169)
chr3 (58-195)||(13839094-13839232)
chr3 (58-195)||(2050010-2050147)
chr3 (58-195)||(12030073-12030210)
chr3 (58-193)||(14842487-14842622)
chr3 (58-178)||(19260749-19260869)
chr3 (15-93)||(15857120-15857198)
chr3 (10-90)||(3992873-3992953)
chr3 (10-90)||(55513193-55513273)
chr3 (10-90)||(2844514-2844594)
chr3 (10-90)||(54037976-54038056)
chr3 (10-90)||(17955832-17955916)
chr3 (122-195)||(51158008-51158081)
chr3 (10-90)||(7854305-7854385)
chr3 (106-195)||(15858996-15859087)
chr3 (132-194)||(2449238-2449300)
chr3 (29-90)||(45581954-45582016)
chr3 (132-195)||(17912483-17912545)
chr3 (17-74)||(17205019-17205076)
chr3 (17-90)||(38810868-38810941)
chr3 (132-192)||(13954890-13954949)
chr3 (132-192)||(13975722-13975781)
chr3 (139-195)||(15936634-15936690)
chr3 (132-192)||(45861009-45861068)
chr3 (17-72)||(12031849-12031904)
chr3 (17-90)||(13301323-13301396)
chr3 (17-90)||(13311979-13312052)
chr3 (148-189)||(14080715-14080756)
chr3 (57-90)||(15615137-15615170)
chr3 (17-74)||(17191879-17191936)
chr3 (58-90)||(2449152-2449184)
chr3 (58-90)||(16261777-16261809)
chr3 (58-90)||(16933869-16933901)
chr3 (58-90)||(17912398-17912430)
chr3 (58-90)||(23492696-23492728)
chr3 (58-90)||(38168237-38168269)
chr3 (144-196)||(41270275-41270327)
chr3 (58-90)||(53771365-53771397)
chr3 (144-196)||(55316419-55316471)
chr3 (17-74)||(3576290-3576347)
chr3 (24-89)||(15550922-15550987)
chr3 (58-90)||(11986080-11986112)
chr3 (58-90)||(13954804-13954836)
chr3 (149-189)||(14059214-14059254)
chr3 (58-90)||(14285289-14285321)
chr3 (58-90)||(19947026-19947058)
chr3 (58-90)||(30153265-30153297)
chr3 (149-189)||(30207422-30207462)
chr3 (58-90)||(33342204-33342236)
chr3 (58-90)||(45861122-45861154)
chr3 (58-90)||(51961031-51961063)
[»] chr2 (35 HSPs)
chr2 (10-195)||(20627190-20627376)
chr2 (10-195)||(43642833-43643020)
chr2 (58-195)||(462938-463075)
chr2 (10-194)||(19794581-19794766)
chr2 (58-195)||(8891442-8891581)
chr2 (58-195)||(36982364-36982504)
chr2 (58-154)||(22863169-22863267)
chr2 (10-90)||(22275045-22275125)
chr2 (10-90)||(22284278-22284358)
chr2 (10-89)||(15633538-15633617)
chr2 (58-195)||(24341309-24341452)
chr2 (132-195)||(25265390-25265453)
chr2 (132-194)||(14906440-14906502)
chr2 (132-194)||(19689401-19689463)
chr2 (132-194)||(23820272-23820334)
chr2 (132-194)||(20015212-20015274)
chr2 (17-74)||(43646232-43646289)
chr2 (132-192)||(17396653-17396712)
chr2 (57-90)||(19689314-19689347)
chr2 (58-90)||(9652796-9652828)
chr2 (58-90)||(14906354-14906386)
chr2 (17-69)||(19660221-19660273)
chr2 (144-196)||(19886661-19886713)
chr2 (58-90)||(23820388-23820420)
chr2 (59-90)||(25213372-25213403)
chr2 (17-90)||(19666848-19666921)
chr2 (17-74)||(25305769-25305826)
chr2 (149-189)||(68198-68238)
chr2 (58-90)||(7507757-7507789)
chr2 (58-90)||(17396567-17396599)
chr2 (58-90)||(20015328-20015360)
chr2 (149-189)||(22775206-22775246)
chr2 (149-189)||(22780584-22780624)
chr2 (58-90)||(28031134-28031166)
chr2 (58-90)||(33128372-33128404)
[»] chr4 (27 HSPs)
chr4 (10-195)||(54118120-54118307)
chr4 (58-195)||(122089-122226)
chr4 (58-191)||(13246634-13246769)
chr4 (58-195)||(15675009-15675152)
chr4 (58-195)||(33240900-33241043)
chr4 (10-90)||(25119059-25119139)
chr4 (58-195)||(10104170-10104313)
chr4 (10-90)||(5682380-5682460)
chr4 (132-194)||(10488763-10488825)
chr4 (132-194)||(16327926-16327988)
chr4 (132-194)||(26680401-26680463)
chr4 (58-164)||(31132545-31132657)
chr4 (17-90)||(41165808-41165881)
chr4 (17-74)||(47534933-47534990)
chr4 (58-90)||(14952085-14952117)
chr4 (58-90)||(15135907-15135939)
chr4 (58-90)||(15272211-15272243)
chr4 (58-90)||(16327840-16327872)
chr4 (58-90)||(16609013-16609045)
chr4 (58-90)||(26680517-26680549)
chr4 (132-195)||(13048221-13048284)
chr4 (58-123)||(17145574-17145639)
chr4 (58-90)||(8045272-8045304)
chr4 (149-189)||(15045034-15045074)
chr4 (58-90)||(16523146-16523178)
chr4 (148-192)||(40885570-40885614)
chr4 (144-196)||(47357854-47357906)
[»] chr7 (43 HSPs)
chr7 (17-195)||(3060166-3060344)
chr7 (58-195)||(16211966-16212103)
chr7 (58-195)||(13036938-13037077)
chr7 (58-195)||(36052864-36053003)
chr7 (58-195)||(11580661-11580802)
chr7 (10-90)||(32493898-32493978)
chr7 (10-90)||(126738-126818)
chr7 (10-90)||(1936869-1936949)
chr7 (10-90)||(111121-111201)
chr7 (132-195)||(47481031-47481094)
chr7 (132-194)||(11516428-11516490)
chr7 (133-195)||(13321216-13321278)
chr7 (132-194)||(15441564-15441626)
chr7 (132-194)||(30262129-30262191)
chr7 (10-89)||(7283908-7283987)
chr7 (132-191)||(7293220-7293279)
chr7 (17-90)||(13377851-13377924)
chr7 (58-195)||(18253760-18253898)
chr7 (60-195)||(295893-296029)
chr7 (17-74)||(13389693-13389750)
chr7 (132-192)||(25292338-25292398)
chr7 (58-164)||(36024372-36024485)
chr7 (58-90)||(2029244-2029276)
chr7 (58-90)||(7293333-7293365)
chr7 (144-196)||(10989609-10989661)
chr7 (58-90)||(11516544-11516576)
chr7 (58-90)||(14113903-14113935)
chr7 (58-90)||(15441478-15441510)
chr7 (17-73)||(16919870-16919926)
chr7 (58-90)||(30262043-30262075)
chr7 (58-90)||(42056188-42056220)
chr7 (59-196)||(2437657-2437794)
chr7 (58-90)||(371417-371449)
chr7 (58-90)||(3049905-3049937)
chr7 (58-98)||(13321326-13321366)
chr7 (149-189)||(13377735-13377775)
chr7 (144-196)||(13911024-13911076)
chr7 (132-164)||(14113989-14114021)
chr7 (132-164)||(14423639-14423671)
chr7 (62-90)||(15516765-15516793)
chr7 (58-127)||(15709428-15709501)
chr7 (58-90)||(25124450-25124482)
chr7 (58-90)||(47480944-47480976)
[»] chr8 (27 HSPs)
chr8 (10-195)||(16404852-16405038)
chr8 (58-195)||(16193643-16193779)
chr8 (58-195)||(24928716-24928854)
chr8 (58-195)||(43373392-43373531)
chr8 (10-90)||(274766-274846)
chr8 (10-90)||(641003-641083)
chr8 (10-90)||(826809-826889)
chr8 (10-90)||(24716714-24716794)
chr8 (132-194)||(5238288-5238350)
chr8 (132-194)||(22907214-22907276)
chr8 (132-194)||(24661248-24661310)
chr8 (132-194)||(43685747-43685809)
chr8 (10-90)||(39115598-39115678)
chr8 (132-195)||(17345769-17345832)
chr8 (17-74)||(17285543-17285600)
chr8 (17-74)||(21198005-21198062)
chr8 (58-90)||(5238404-5238436)
chr8 (58-90)||(22907128-22907160)
chr8 (58-90)||(24385652-24385684)
chr8 (58-90)||(24661162-24661194)
chr8 (58-90)||(43685863-43685895)
chr8 (144-195)||(6774258-6774309)
chr8 (144-195)||(24549182-24549233)
chr8 (58-90)||(2545265-2545297)
chr8 (58-90)||(3431176-3431208)
chr8 (58-90)||(22886654-22886686)
chr8 (144-196)||(30120922-30120974)
[»] scaffold0023 (2 HSPs)
scaffold0023 (58-195)||(48798-48935)
scaffold0023 (58-90)||(61122-61154)
[»] scaffold0106 (1 HSPs)
scaffold0106 (58-195)||(41929-42066)
[»] scaffold0266 (2 HSPs)
scaffold0266 (58-194)||(1325-1462)
scaffold0266 (58-195)||(3508-3645)
[»] scaffold0001 (2 HSPs)
scaffold0001 (58-195)||(172105-172242)
scaffold0001 (58-195)||(177808-177945)
[»] scaffold0018 (1 HSPs)
scaffold0018 (60-195)||(51110-51245)
[»] scaffold0077 (2 HSPs)
scaffold0077 (57-195)||(36836-36976)
scaffold0077 (10-89)||(15319-15398)
[»] scaffold0008 (1 HSPs)
scaffold0008 (58-195)||(128095-128232)
[»] scaffold0012 (2 HSPs)
scaffold0012 (58-195)||(247366-247505)
scaffold0012 (58-159)||(34075-34177)
[»] scaffold0413 (1 HSPs)
scaffold0413 (58-195)||(5990-6127)
[»] scaffold0175 (1 HSPs)
scaffold0175 (58-195)||(882-1019)
[»] chr6 (29 HSPs)
chr6 (58-195)||(23153647-23153786)
chr6 (59-195)||(14626045-14626181)
chr6 (10-90)||(19983144-19983224)
chr6 (10-90)||(35015009-35015089)
chr6 (58-127)||(23148266-23148335)
chr6 (10-90)||(18583640-18583720)
chr6 (132-195)||(1657748-1657811)
chr6 (132-195)||(15862671-15862734)
chr6 (132-195)||(35009439-35009502)
chr6 (17-74)||(21623506-21623563)
chr6 (144-196)||(25175763-25175815)
chr6 (132-195)||(27751625-27751688)
chr6 (57-90)||(1650020-1650053)
chr6 (17-74)||(22361619-22361676)
chr6 (17-89)||(14152632-14152704)
chr6 (144-196)||(16825752-16825804)
chr6 (58-90)||(18002395-18002427)
chr6 (58-90)||(23995247-23995279)
chr6 (58-90)||(26090059-26090091)
chr6 (59-90)||(4991396-4991427)
chr6 (58-88)||(15742120-15742150)
chr6 (58-90)||(1657661-1657693)
chr6 (58-98)||(15862781-15862821)
chr6 (149-189)||(18399144-18399184)
chr6 (58-90)||(18823283-18823315)
chr6 (58-90)||(18839138-18839170)
chr6 (144-196)||(27653983-27654035)
chr6 (58-90)||(27751742-27751774)
chr6 (58-90)||(32276659-32276691)
[»] scaffold0162 (3 HSPs)
scaffold0162 (58-195)||(26340-26478)
scaffold0162 (132-192)||(8180-8240)
scaffold0162 (17-74)||(6877-6934)
[»] chr5 (32 HSPs)
chr5 (58-195)||(23507165-23507302)
chr5 (58-195)||(27182471-27182610)
chr5 (58-195)||(18530988-18531130)
chr5 (58-195)||(22053753-22053896)
chr5 (132-194)||(20623170-20623232)
chr5 (132-194)||(21233528-21233590)
chr5 (132-194)||(37052945-37053007)
chr5 (134-195)||(25900408-25900469)
chr5 (132-191)||(16536401-16536460)
chr5 (132-195)||(34939477-34939540)
chr5 (15-89)||(11584374-11584448)
chr5 (17-90)||(5450695-5450768)
chr5 (17-74)||(21222462-21222519)
chr5 (144-196)||(12574-12626)
chr5 (58-90)||(16105967-16105999)
chr5 (144-196)||(19500099-19500151)
chr5 (58-90)||(20623286-20623318)
chr5 (58-90)||(21233442-21233474)
chr5 (144-196)||(22366481-22366533)
chr5 (144-196)||(25426828-25426880)
chr5 (58-90)||(25900320-25900352)
chr5 (58-90)||(37053061-37053093)
chr5 (144-195)||(29188284-29188335)
chr5 (147-196)||(18777995-18778044)
chr5 (147-196)||(43443398-43443447)
chr5 (58-90)||(108728-108760)
chr5 (144-196)||(4199985-4200037)
chr5 (58-90)||(9730278-9730310)
chr5 (59-123)||(11211983-11212047)
chr5 (58-90)||(16536514-16536546)
chr5 (149-189)||(16595713-16595753)
chr5 (144-196)||(21073595-21073647)
[»] scaffold0302 (1 HSPs)
scaffold0302 (58-195)||(12313-12450)
[»] scaffold0498 (1 HSPs)
scaffold0498 (58-195)||(9078-9215)
[»] scaffold0009 (1 HSPs)
scaffold0009 (58-195)||(272225-272362)
[»] scaffold0028 (3 HSPs)
scaffold0028 (58-195)||(89378-89517)
scaffold0028 (58-183)||(107708-107835)
scaffold0028 (59-90)||(130880-130911)
[»] scaffold0195 (2 HSPs)
scaffold0195 (61-195)||(19406-19543)
scaffold0195 (132-195)||(21490-21553)
[»] scaffold0025 (3 HSPs)
scaffold0025 (58-158)||(146838-146938)
scaffold0025 (58-195)||(9049-9192)
scaffold0025 (100-195)||(148921-149018)
[»] scaffold0218 (1 HSPs)
scaffold0218 (68-195)||(4996-5124)
[»] scaffold0011 (1 HSPs)
scaffold0011 (58-195)||(123087-123227)
[»] scaffold0034 (1 HSPs)
scaffold0034 (10-90)||(80187-80267)
[»] scaffold0016 (3 HSPs)
scaffold0016 (10-91)||(166116-166197)
scaffold0016 (16-91)||(162036-162111)
scaffold0016 (17-90)||(116410-116483)
[»] scaffold0184 (1 HSPs)
scaffold0184 (10-90)||(31132-31212)
[»] scaffold0078 (3 HSPs)
scaffold0078 (10-90)||(41632-41712)
scaffold0078 (132-194)||(37066-37128)
scaffold0078 (58-90)||(36980-37012)
[»] scaffold0686 (2 HSPs)
scaffold0686 (16-90)||(5735-5809)
scaffold0686 (16-90)||(5941-6015)
[»] scaffold0342 (1 HSPs)
scaffold0342 (10-91)||(304-385)
[»] scaffold0132 (3 HSPs)
scaffold0132 (10-90)||(42677-42754)
scaffold0132 (132-195)||(13706-13769)
scaffold0132 (58-90)||(13824-13856)
[»] scaffold0772 (2 HSPs)
scaffold0772 (139-195)||(5729-5785)
scaffold0772 (58-90)||(5846-5878)
[»] scaffold1542 (1 HSPs)
scaffold1542 (132-195)||(534-597)
[»] scaffold1164 (1 HSPs)
scaffold1164 (10-89)||(1701-1780)
[»] scaffold0122 (2 HSPs)
scaffold0122 (10-89)||(19802-19881)
scaffold0122 (10-89)||(24106-24185)
[»] scaffold0141 (4 HSPs)
scaffold0141 (132-194)||(26996-27058)
scaffold0141 (139-194)||(22741-22796)
scaffold0141 (58-90)||(22857-22889)
scaffold0141 (58-90)||(27112-27144)
[»] scaffold0124 (2 HSPs)
scaffold0124 (132-194)||(1582-1644)
scaffold0124 (58-90)||(1496-1528)
[»] scaffold0125 (2 HSPs)
scaffold0125 (132-195)||(41848-41911)
scaffold0125 (58-98)||(41957-41997)
[»] scaffold0075 (1 HSPs)
scaffold0075 (132-195)||(34460-34523)
[»] scaffold0049 (2 HSPs)
scaffold0049 (10-89)||(20493-20572)
scaffold0049 (139-195)||(48387-48443)
[»] scaffold0876 (1 HSPs)
scaffold0876 (19-89)||(94-164)
[»] scaffold0310 (2 HSPs)
scaffold0310 (15-89)||(6261-6335)
scaffold0310 (52-89)||(4-41)
[»] scaffold0026 (2 HSPs)
scaffold0026 (58-195)||(107947-108085)
scaffold0026 (147-189)||(89863-89905)
[»] scaffold0507 (1 HSPs)
scaffold0507 (17-90)||(1363-1436)
[»] scaffold0013 (1 HSPs)
scaffold0013 (17-74)||(35816-35873)
[»] scaffold0116 (1 HSPs)
scaffold0116 (10-90)||(30417-30497)
[»] scaffold1295 (1 HSPs)
scaffold1295 (17-74)||(442-499)
[»] scaffold0053 (1 HSPs)
scaffold0053 (17-74)||(76699-76756)
[»] scaffold0004 (1 HSPs)
scaffold0004 (57-90)||(193396-193429)
[»] scaffold1711 (1 HSPs)
scaffold1711 (144-196)||(1304-1356)
[»] scaffold0706 (1 HSPs)
scaffold0706 (58-90)||(6443-6475)
[»] scaffold0597 (1 HSPs)
scaffold0597 (58-90)||(878-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (58-90)||(9882-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (58-90)||(13285-13317)
[»] scaffold0058 (2 HSPs)
scaffold0058 (58-90)||(57392-57424)
scaffold0058 (148-189)||(70307-70348)
[»] scaffold0032 (2 HSPs)
scaffold0032 (58-90)||(55904-55936)
scaffold0032 (58-90)||(108075-108107)
[»] scaffold0361 (1 HSPs)
scaffold0361 (132-191)||(3394-3453)
[»] scaffold0207 (1 HSPs)
scaffold0207 (58-101)||(18015-18058)
[»] scaffold1272 (1 HSPs)
scaffold1272 (17-74)||(632-689)
[»] scaffold0761 (1 HSPs)
scaffold0761 (58-123)||(1492-1557)
[»] scaffold0483 (1 HSPs)
scaffold0483 (17-74)||(6999-7056)
[»] scaffold0456 (2 HSPs)
scaffold0456 (148-189)||(1546-1587)
scaffold0456 (148-189)||(8691-8732)
[»] scaffold0123 (1 HSPs)
scaffold0123 (148-189)||(8216-8257)
[»] scaffold0080 (1 HSPs)
scaffold0080 (17-74)||(43651-43708)
[»] scaffold0010 (1 HSPs)
scaffold0010 (17-74)||(31357-31414)
[»] scaffold0589 (1 HSPs)
scaffold0589 (149-189)||(8011-8051)
[»] scaffold0529 (1 HSPs)
scaffold0529 (143-195)||(3163-3215)
[»] scaffold0367 (1 HSPs)
scaffold0367 (58-90)||(17209-17241)
[»] scaffold0335 (1 HSPs)
scaffold0335 (58-90)||(5476-5508)
[»] scaffold0303 (1 HSPs)
scaffold0303 (58-90)||(4346-4378)
[»] scaffold0243 (1 HSPs)
scaffold0243 (149-189)||(2317-2357)
[»] scaffold0234 (1 HSPs)
scaffold0234 (58-90)||(17304-17336)
[»] scaffold0173 (1 HSPs)
scaffold0173 (58-90)||(5549-5581)
[»] scaffold0118 (1 HSPs)
scaffold0118 (58-90)||(34308-34340)
[»] scaffold0092 (1 HSPs)
scaffold0092 (149-189)||(3525-3565)
[»] scaffold0066 (1 HSPs)
scaffold0066 (58-90)||(45338-45370)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-90)||(12418-12450)


Alignment Details
Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 41394610 - 41394422
Alignment:
Q  7 tggagaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaatt 106  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41394610 tggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtaaatt 41394511  T
Q  107 ttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  41394510 ttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgatgatatgtttgtatgcataaattgatg 41394422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 37844374 - 37844513
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  37844374 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcat 37844473  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  37844474 gctccaactatgatgatatgtttgtatgcatgaattgatg 37844513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 20913367 - 20913230
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||||||||||||||| |||||||| ||||||||  ||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||    
T  20913367 taaggtaagggggttagtctttatcgtaatcatcctcattttgcaaattttcaattgttgtatgaattttgcttacggataattgttgctaaattcgtgc 20913268  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  20913267 tccaactgtgatgatatgtttgtatgcatgaattgatg 20913230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 20931682 - 20931545
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||||||| |||||||||||||||| ||||||||  ||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||    
T  20931682 taaggtaagggggttagcctttatcataatcatcctcattttgcaaattttcaattgttgtatgaagtttgcttatggataattgttgctaaattcgtgc 20931583  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  20931582 tccaactgtgatgatatgtttgtatgcatgaattgatg 20931545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 20446019 - 20445879
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 154  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   || |||||| ||||||||||||||||    
T  20446019 taaggtaagggagttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 20445920  T
Q  155 tgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| | || || ||||||||||||||||||||||||    
T  20445919 tgctccaattgtgatgatatgtttgtatgcatgaattgatg 20445879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 20893551 - 20893689
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  20893551 taaggtaagggggttagtcttcatcataatcatcatcattttgt-aattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattctt 20893649  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || || ||||||||||||||||||||||||    
T  20893650 gctccaactgtgatgatatgtttgtatgcatgaattgatg 20893689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 20531783 - 20531644
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  20531783 taaggtaaggaaattagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 20531684  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| | || |  ||||||||||||||||||||||||    
T  20531683 gctccaaatgtgataatatgtttgtatgcatgaattgatg 20531644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 21860414 - 21860334
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  21860414 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 21860334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 44034829 - 44034903
Alignment:
Q  16 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  44034829 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 44034903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 41218808 - 41218728
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || ||||| |||||    
T  41218808 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcatgatcat 41218728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 27675191 - 27675120
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatc 88  Q
    ||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||  ||||||||||||    
T  27675191 taggagctaaagtgaagcttgggctaggaattggagataattaaggtaagggggttagaatttatcataatc 27675120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 51452755 - 51452693
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||| ||||| || || |||||||||||||||||||||||    
T  51452755 atggataattgttgctaaattcgtgcttcaactttgatgatatgtttgtatgcatgaattgat 51452693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 13376711 - 13376768
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  13376711 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 13376768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 20177570 - 20177513
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||| ||||||||    
T  20177570 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaatggggttag 20177513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 45051759 - 45051726
Alignment:
Q  57 ttaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||||    
T  45051759 ttaaggtaagggggttagtctttatcataatcat 45051726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 90
Target Start/End: Original strand, 15861327 - 15861358
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||    
T  15861327 aaggtaagggggttagtctttatcataatcat 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 5072388 - 5072440
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || |||||||||| |||||||||||||||||    
T  5072388 tgctaaattcgtgctcttgctgtgatgttatgtttatatgcatgaattgatgt 5072440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 16646158 - 16646118
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  16646158 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 16646118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 18601118 - 18601170
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    |||||||||| |||||   || || ||||||||||||||||||||||||||||    
T  18601118 tgctaaattcatgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 18601170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 51452841 - 51452809
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||| |||||||    
T  51452841 taaggtaagggggttagtctttatcttaatcat 51452809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 7e-76; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 16743990 - 16744177
Alignment:
Q  7 tggagaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaatt 106  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| |||||||||||||||||||| ||||    
T  16743990 tggagaatcataggagctaaagtgaagctagagctaatagttggagataattaaggtaacgaggttagtctttaccataatcatcatcattttgtaaatt 16744089  T
Q  107 ttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || || ||||||||||| |||||||||||    
T  16744090 ttcaaatgttgtatgaattttgattatggatgattgttgttaaattcgtgctccaactttgatgatatgtttgtatccatgaattgat 16744177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 19232169 - 19231981
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtg-aatttt 108  Q
    |||| ||||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  19232169 agaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcttaatcatcatcattttgtgaaatttt 19232070  T
Q  109 caaatgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||||||||||||   || |||||| |||||||||||||||||||||||||| || || ||||||| ||| ||||||||||||    
T  19232069 caaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaactgtgatgatatgtttatattcatgaattgatg 19231981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 13839232 - 13839094
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 156  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  13839232 taaggtaagggggttagtcttcatcataatcatcatcattttgtgaaattttcaaatgttgtatgaattttgattatgaataattgttgctaaattcgtg 13839133  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| || || ||||||||||||||||||||||||    
T  13839132 ctccaactgtgatgatatgtttgtatgcatgaattgatg 13839094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 2050147 - 2050010
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  2050147 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatcaattttgcttatggataattgttgctaaattcgtgc 2050048  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| ||  | ||||||||||||| ||||||||||    
T  2050047 tccaactgtgacgatatgtttgtatgcctgaattgatg 2050010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 12030073 - 12030210
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||    
T  12030073 taaggtaagggggttaatcattatcataatcatcatcattttgtgaaatttcaaatgttgtatgacttttgcttatggataattgttgctaaattcgtgc 12030172  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  12030173 tccaactgtgatgatatgtttgtatgcatgaattgatg 12030210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 58 - 193
Target Start/End: Original strand, 14842487 - 14842622
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||| ||| ||||  |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  14842487 taaggtaagggggttagtctttatcataatcatcttcactttgcaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 14842586  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattga 193  Q
    ||||||| || || ||||||||||||||||||||||    
T  14842587 tccaactgtgatgatatgtttgtatgcatgaattga 14842622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 178
Target Start/End: Original strand, 19260749 - 19260869
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  19260749 taaggtaagggggttagtctttatcataatcatcatcattttgtaagttttcaaatgttgtatgaattttttttatggataattgttgctaaattcgtgc 19260848  T
Q  158 tccaactatgttgttatgttt 178  Q
    || || |||| || |||||||    
T  19260849 tctaattatgatgatatgttt 19260869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 15857120 - 15857198
Alignment:
Q  15 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcat 93  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||    
T  15857120 cataggagctaaagtgaagctagagctaatacttggagataattaaggtaagggggttagtcttcatcataatcatcat 15857198  T

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Target: chr3; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 3992953 - 3992873
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  3992953 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 3992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 55513273 - 55513193
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  55513273 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 55513193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 2844594 - 2844514
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||    
T  2844594 agaatcataggagcaaaagtgaagctagagctaatagtttgagataattaaggtaagggggttagtttttatcataatcat 2844514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 54037976 - 54038056
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||    
T  54037976 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagtttttatcataatcat 54038056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 17955832 - 17955916
Alignment:
Q  10 agaagcataggagctaaagtgaagctag----agctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17955832 agaatcataggagcaaaagtgaagctaggtagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 17955916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 51158008 - 51158081
Alignment:
Q  122 aattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| |||||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  51158008 aattttgcttatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 51158081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 7854385 - 7854305
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||| || |||||||||||    
T  7854385 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaagggggttagttttcatcataatcat 7854305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 106 - 195
Target Start/End: Original strand, 15858996 - 15859087
Alignment:
Q  106 tttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| |||||||||||||||   || |||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  15858996 tttcaattgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 15859087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 2449238 - 2449300
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  2449238 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 2449300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 29 - 90
Target Start/End: Complemental strand, 45582016 - 45581954
Alignment:
Q  29 tgaagctagagctagtagttggagataattaaggtaag-ggggttagtctttatcataatcat 90  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  45582016 tgaagctagagctaatagttggagataattaaggtaaggggggttagtttttatcataatcat 45581954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 17912483 - 17912545
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  17912483 atggataattgttgctaaattcgtgctccaact-tgatgatatgtttgtatgcatgaattgatg 17912545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 17205076 - 17205019
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  17205076 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 17205019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 38810868 - 38810941
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | |||| ||||| |||||||||||||||||  || |||||||||||    
T  38810868 taggagctaaagtgaagcttgggctaggaattggtgataactaaggtaagggggttagaattcatcataatcat 38810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 13954890 - 13954949
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||| |||||||||||||||||||||||||| || || |||| ||||||||||||||||    
T  13954890 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattg 13954949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 13975722 - 13975781
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||| |||||||||||||||||||||||||| || || |||| ||||||||||||||||    
T  13975722 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattg 13975781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 195
Target Start/End: Original strand, 15936634 - 15936690
Alignment:
Q  139 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||||||| |  || ||||||||||||||||||||||||    
T  15936634 attgttactaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatg 15936690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 45861068 - 45861009
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||| |||||||||||||||||||||||||| || || |||| ||||||||||||||||    
T  45861068 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattg 45861009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 72
Target Start/End: Complemental strand, 12031904 - 12031849
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtt 72  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||    
T  12031904 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggtt 12031849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 13301323 - 13301396
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  13301323 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 13301396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 13311979 - 13312052
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  13311979 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 13312052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 14080756 - 14080715
Alignment:
Q  148 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||||||||| || ||||||||||||||||||    
T  14080756 aaattcgtgctccaactatgatgatatgtttgtatgcatgaa 14080715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Complemental strand, 15615170 - 15615137
Alignment:
Q  57 ttaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||||    
T  15615170 ttaaggtaagggggttagtctttatcataatcat 15615137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 17191936 - 17191879
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||| | | ||||| | |||| |||||||||||||||||||||||    
T  17191936 taggagctaaagtgaagtttgggctaggaattggtgataattaaggtaagggggttag 17191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 2449152 - 2449184
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  2449152 taaggtaagggggttagtctttatcataatcat 2449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 16261809 - 16261777
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  16261809 taaggtaagggggttagtctttatcataatcat 16261777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 16933869 - 16933901
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  16933869 taaggtaagggggttagtctttatcataatcat 16933901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 17912398 - 17912430
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  17912398 taaggtaagggggttagtctttatcataatcat 17912430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 23492728 - 23492696
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  23492728 taaggtaagggggttagtctttatcataatcat 23492696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 38168269 - 38168237
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  38168269 taaggtaagggggttagtctttatcataatcat 38168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 41270327 - 41270275
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  41270327 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 41270275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 53771397 - 53771365
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  53771397 taaggtaagggggttagtctttatcataatcat 53771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 55316471 - 55316419
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  55316471 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 55316419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 3576290 - 3576347
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    |||||| |||||||||||| | ||||| | || | |||||||||||||||||||||||    
T  3576290 taggaggtaaagtgaagcttgggctaggaatttgtgataattaaggtaagggggttag 3576347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 15550987 - 15550922
Alignment:
Q  24 taaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||||||||||| | ||||| | |||| |||||||||| ||||||||||||  || ||||||||||    
T  15550987 taaagtgaagcttgggctaggaattggtgataattaagataagggggttagaattcatcataatca 15550922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 11986080 - 11986112
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  11986080 taaggtaagggggttagtcttcatcataatcat 11986112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 13954804 - 13954836
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||| |||||||||    
T  13954804 taaggtaagggggttagtctttaccataatcat 13954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 14059214 - 14059254
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  14059214 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 14059254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 14285321 - 14285289
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  14285321 taaggtaagggggttagtcttcatcataatcat 14285289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 19947058 - 19947026
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  19947058 taaggtaagggggttagtcttcatcataatcat 19947026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 30153297 - 30153265
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||| ||||||||||||||    
T  30153297 taaggtaagggggttagtttttatcataatcat 30153265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 30207462 - 30207422
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  30207462 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 30207422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 33342236 - 33342204
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||| |||||||||||||||||||||||    
T  33342236 taaggtaagagggttagtctttatcataatcat 33342204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 45861154 - 45861122
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||| |||||||||    
T  45861154 taaggtaagggggttagtctttaccataatcat 45861122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 51961031 - 51961063
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  51961031 taaggtaagggggttagtcttcatcataatcat 51961063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 9e-66; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 9e-66
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 20627190 - 20627376
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgt-gaatttt 108  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||    
T  20627190 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaacggggttagtctttatcataatcatcatcattttgtaaaatttt 20627289  T
Q  109 caaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| ||||||||||| ||||||||||| ||||||| |||||||||||||||||| || || |||||||||||||| |||||||||    
T  20627290 caaatattgtatgaattatgattatggataattgttgttaaattcgtgctccaactgtgatgatatgtttgtatgcacgaattgatg 20627376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 43642833 - 43643020
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttc 109  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  43642833 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaagggaaggaggttagtctttatcataatcatcatcattttgtgaattttc 43642932  T
Q  110 aaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||||||||   ||  ||||| |||||||||||||| ||||||||| | || || ||||||||||||||||||||||||    
T  43642933 aaatgttgtatgaatttttgcatagtggataattgttgctaaatttgtgctccaattgtgatgatatgtttgtatgcatgaattgatg 43643020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 463075 - 462938
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  463075 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 462976  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||| ||||||||||||||||||||    
T  462975 tccaactgtgatgatatatttgtatgcatgaattgatg 462938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 19794581 - 19794766
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttc 109  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| || ||||    
T  19794581 agaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgt-aaatttc 19794679  T
Q  110 aaatgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    ||||||||||||||||||   || |||||| ||||| | |||||||||||||||||| || || |||||||||||||||||||||||    
T  19794680 aaatgttgtatgaatttttgcataatggataattgtcgttaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgat 19794766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 8891581 - 8891442
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  8891581 taaggtaaaggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 8891482  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || |  ||||||||||||||||||||||||    
T  8891481 gctccaactgtgataatatgtttgtatgcatgaattgatg 8891442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 36982364 - 36982504
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 154  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||   || |||||| ||||||||||||||||    
T  36982364 taaggtaagggggttagtctttatcataatcatcatcatttttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 36982463  T
Q  155 tgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||| || || ||||||||||| ||||||||||||    
T  36982464 tgctccaactgtgatgatatgtttgtattcatgaattgatg 36982504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 58 - 154
Target Start/End: Complemental strand, 22863267 - 22863169
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||   || |||||| ||||||||||||||||    
T  22863267 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaattgttgtatgaatttttgcataatggataattgttgctaaattcg 22863169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 22275125 - 22275045
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  22275125 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagcctttatcataatcat 22275045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 22284358 - 22284278
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22284358 agaatcataggagcaaaagtgaagttagagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 22284278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 15633617 - 15633538
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||    
T  15633617 agaatcataggagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtctttatcataatca 15633538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 24341309 - 24341452
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||||||||||||||| |||||||||||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  24341309 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 24341408  T
Q  152 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    || |||| ||||| || || ||||||||||||||||||||||||    
T  24341409 tcatgcttcaactgtgatgatatgtttgtatgcatgaattgatg 24341452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 25265390 - 25265453
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  25265390 atggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatg 25265453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 14906440 - 14906502
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  14906440 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 14906502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 19689401 - 19689463
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  19689401 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 19689463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 23820334 - 23820272
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  23820334 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 23820272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 20015274 - 20015212
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||| ||||||||||||||    
T  20015274 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgcatgcatgaattgat 20015212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 43646289 - 43646232
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  43646289 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 43646232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 17396653 - 17396712
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||| |||||||||||||||||||||||||| || || |||| ||||||||||||||||    
T  17396653 atggataattgttgctaaattcgtgctccaactttgatgatatg-ttgtatgcatgaattg 17396712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 19689314 - 19689347
Alignment:
Q  57 ttaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||||    
T  19689314 ttaaggtaagggggttagtctttatcataatcat 19689347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 9652796 - 9652828
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  9652796 taaggtaagggggttagtctttatcataatcat 9652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 14906354 - 14906386
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  14906354 taaggtaagggggttagtctttatcataatcat 14906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 19660273 - 19660221
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggg 69  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||||||||    
T  19660273 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggg 19660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 19886661 - 19886713
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  19886661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 19886713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 23820420 - 23820388
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  23820420 taaggtaagggggttagtctttatcataatcat 23820388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 25213403 - 25213372
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||    
T  25213403 aaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 19666921 - 19666848
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||| | | ||||| | || | | |||||||||||||||||||||  || |||||||||||    
T  19666921 taggagctaaagtgaagtttgggctaggaatttgtgctaattaaggtaagggggttagaattcatcataatcat 19666848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 25305826 - 25305769
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    |||||| |||||||||||| | ||||  | |||| |||||||||||||||||||||||    
T  25305826 taggagttaaagtgaagcttgggctatgaattggtgataattaaggtaagggggttag 25305769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 68238 - 68198
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  68238 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 68198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 7507757 - 7507789
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  7507757 taaggtaagggggttagtcttcatcataatcat 7507789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 17396567 - 17396599
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||| |||||||||    
T  17396567 taaggtaagggggttagtctttaccataatcat 17396599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 20015360 - 20015328
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||| |||||    
T  20015360 taaggtaagggggttagtctttatcatgatcat 20015328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 22775206 - 22775246
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  22775206 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 22775246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 22780584 - 22780624
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  22780584 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 22780624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 28031134 - 28031166
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  28031134 taaggtaagggggttagtcttcatcataatcat 28031166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 33128404 - 33128372
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  33128404 taaggtaagggggttagtcttcatcataatcat 33128372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 125; Significance: 1e-64; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 125; E-Value: 1e-64
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 54118120 - 54118307
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttc 109  Q
    |||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  54118120 agaatcataagagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcattattttgtgaattttc 54118219  T
Q  110 aaatgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||||||||   || |||||| |||||||||||||||||||||||| | || || ||||||||||||||||||||||||    
T  54118220 aaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattgatg 54118307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 122226 - 122089
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||||    
T  122226 taaggtaaggggattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaatttgtgc 122127  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  122126 tccaactgtgatgatatgtttgtatgcatgaattgatg 122089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 58 - 191
Target Start/End: Complemental strand, 13246769 - 13246634
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||| |||||||||    
T  13246769 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgttaaattcgt 13246670  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaatt 191  Q
    ||| ||||| || || ||||||||||||||||||||    
T  13246669 gctacaactgtgatgatatgtttgtatgcatgaatt 13246634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 15675009 - 15675152
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||||||||||||||| |||||||||||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  15675009 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 15675108  T
Q  152 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||| || || ||||||||||||||||||||||||    
T  15675109 tcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 15675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 33241043 - 33240900
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||||||||||||||| |||||||||||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  33241043 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 33240944  T
Q  152 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||| || || ||||||||||||||||||||||||    
T  33240943 tcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 33240900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 25119059 - 25119139
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  25119059 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggagttagtttttatcataatcat 25119139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 10104170 - 10104313
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||||||||||||||| |||||||||||||||||    |||   | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  10104170 taaggtaagggggttagtcttcatcataatcatcatcatcatttttacaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 10104269  T
Q  152 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
     |||||||||||| || || ||||||||||||||||||||||||    
T  10104270 ccgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 10104313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 5682380 - 5682460
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||  |||||| ||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  5682380 agaatcataggagcaaaagtgaagcatgagctaatagttggtgataattaaggtaagtgggttagtttttatcataatcat 5682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 10488825 - 10488763
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  10488825 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 10488763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 16327926 - 16327988
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  16327926 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 16327988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 26680463 - 26680401
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  26680463 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 26680401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 31132657 - 31132545
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||||||||||||||| |||||||| ||||||||    ||||  | ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  31132657 taaggtaagggggttagtcttcatcataattatcatcatcatttttgcaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 31132558  T
Q  152 tcgtgctccaact 164  Q
    |||||||||||||    
T  31132557 tcgtgctccaact 31132545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 41165808 - 41165881
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||| |||||||||||||  || |||||||||||    
T  41165808 taggagctaaagtgaagcttgggctaggaattggtgataattaacgtaagggggttagaattcatcataatcat 41165881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 47534933 - 47534990
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | || || | |||| |||||||||||||||||||||||    
T  47534933 taggagctaaagtgaagcttgggcgaggaattggtgataattaaggtaagggggttag 47534990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 14952117 - 14952085
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  14952117 taaggtaagggggttagtctttatcataatcat 14952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 15135907 - 15135939
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  15135907 taaggtaagggggttagtctttatcataatcat 15135939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 15272211 - 15272243
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  15272211 taaggtaagggggttagtctttatcataatcat 15272243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 16327840 - 16327872
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  16327840 taaggtaagggggttagtctttatcataatcat 16327872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 16609013 - 16609045
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  16609013 taaggtaagggggttagtctttatcataatcat 16609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 26680549 - 26680517
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  26680549 taaggtaagggggttagtctttatcataatcat 26680517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 13048221 - 13048284
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||| ||||||||||    || ||||||||||||||||| ||||||    
T  13048221 atggataattgttgctaaattcatgctccaacttcaatgatatgtttgtatgcatgatttgatg 13048284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 17145574 - 17145639
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaa 123  Q
    ||||||||||||||||||  |||||||||||||  ||| ||| || ||||||  ||||||||||||    
T  17145574 taaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatgttgtatgaa 17145639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 8045304 - 8045272
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  8045304 taaggtaagggggttagtcttcatcataatcat 8045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 15045074 - 15045034
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  15045074 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 15045034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 16523178 - 16523146
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  16523178 taaggtaagggggttagtcttcatcataatcat 16523146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 40885570 - 40885614
Alignment:
Q  148 aaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||||| |||||||| || || |||||||||||||||||||||    
T  40885570 aaattcgtactccaactgtggtgctatgtttgtatgcatgaattg 40885614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 47357906 - 47357854
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||| ||||||||    
T  47357906 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatggattgatgt 47357854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 2e-63; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 3060344 - 3060166
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgtt 116  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  3060344 taggagcaaaagtgaagctagagctaatagttggagataatgaaggtaagggggtaagtctttatcataatcatcatcattttgtaaattttcaaatgtt 3060245  T
Q  117 gtatgaattttgattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
     ||||||||||| |||||||| |||||||||||||||||||||||||| || |  ||| ||||||||||| ||||||||    
T  3060244 atatgaattttgcttatggataattgttgctaaattcgtgctccaactgtgataatatatttgtatgcattaattgatg 3060166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 16212103 - 16211966
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||||||||||||||||||    
T  16212103 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaattttgcttatggacaattgttgctaaattcgtgc 16212004  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  16212003 tccaactgtgatgatatgtttgtatgcatgaattgatg 16211966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 13036938 - 13037077
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  13036938 taaggtaagggggttagtcttcaccataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 13037037  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || || ||||||||||||||||||||||||    
T  13037038 gctccaactgtgatgatatgtttgtatgcatgaattgatg 13037077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 36053003 - 36052864
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   || |||||| ||||||||||||||  |    
T  36053003 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgtataatggataattgttgctaaatttat 36052904  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
     |||||||| || || || |||||||||||||||||||||    
T  36052903 actccaactgtgatgatacgtttgtatgcatgaattgatg 36052864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 11580661 - 11580802
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg---attatggatgattgttgctaaattc 153  Q
    |||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    || |||||| ||| |||||||||||    
T  11580661 taaggtaaggggattagtctttatcataatcatcatcatttttgtaaattttcaaatgttgtatgaattttttgcataatggataattattgctaaattc 11580760  T
Q  154 gtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||| || |  ||||||||||||||||||||||||    
T  11580761 gtgctccaactgtgataatatgtttgtatgcatgaattgatg 11580802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 32493898 - 32493978
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  32493898 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 32493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 126818 - 126738
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  126818 agaatcataggagcaaaaatgaagttagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 126738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 1936869 - 1936949
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||| ||| ||||||||||||||| || |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1936869 agaatcatagaagcaaaagtgaagctagagttaatagttggagataattaaggtaaggaggttagtttttatcataatcat 1936949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 111121 - 111201
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| ||||||  |||||| |||||||||||||||||||||||| || |||||||||||    
T  111121 agaatcataggagcaaaagtgaagcttgagctaaaagttggtgataattaaggtaagggggttagttttcatcataatcat 111201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 47481031 - 47481094
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  47481031 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatg 47481094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 11516490 - 11516428
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  11516490 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 11516428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 133 - 195
Target Start/End: Complemental strand, 13321278 - 13321216
Alignment:
Q  133 tggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  13321278 tggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatg 13321216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 15441564 - 15441626
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  15441564 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 15441626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 30262129 - 30262191
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  30262129 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 30262191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 7283908 - 7283987
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||||||||||| ||| || || |||| |||||||||||||||||||||||| || ||||||||||    
T  7283908 agaatcataggagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttagttttcatcataatca 7283987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 7293279 - 7293220
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaatt 191  Q
    |||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||    
T  7293279 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaatt 7293220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Complemental strand, 13377924 - 13377851
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||  || |||||||||||    
T  13377924 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagaattcatcataatcat 13377851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 18253760 - 18253898
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtg 156  Q
    ||||||||||||||||||  | || ||||||||  ||| ||| || ||||||  ||||||||||||  | | || ||| |  |||||| |||||||||||    
T  18253760 taaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttactaaattcgtg 18253859  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| |  || ||||||||||||||||||||||||    
T  18253860 ctccaactgtaatgatatgtttgtatgcatgaattgatg 18253898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 295893 - 296029
Alignment:
Q  60 aggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatg-aattttg-attatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||| ||||| | ||||||  |||||||||| || |||||||||  ||||||| ||||||| || ||| || ||||||||||||||||||     
T  295893 aggtaagggggtttgtcttcaacataattctcatcatttt-tgcattttcaaactttgtatgaaattttgcataatgaataattgttgctaaattcgtgt 295991  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    || || |  | |||||||||||| ||||||||| ||||    
T  295992 tctaattgaggtgttatgtttgtgtgcatgaatcgatg 296029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 13389750 - 13389693
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  13389750 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 13389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 25292338 - 25292398
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||| |||||||||||||| ||||||||||| || || |||||||||||| ||||||||    
T  25292338 atggataattgttgctaaatttgtgctccaactttgatgatatgtttgtatgtatgaattg 25292398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 164
Target Start/End: Complemental strand, 36024485 - 36024372
Alignment:
Q  58 taaggtaaggggg-ttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaa 150  Q
    ||||||||||||| |||||||| |||||||||||||||||    |||   | ||||||||||| |||||||||||   ||  ||||| |||||| |||||    
T  36024485 taaggtaaggggggttagtcttcatcataatcatcatcatcatttttacaatttttcaaatgtggtatgaatttttcataattggataattgtttctaaa 36024386  T
Q  151 ttcgtgctccaact 164  Q
    ||||||||||||||    
T  36024385 ttcgtgctccaact 36024372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 2029276 - 2029244
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  2029276 taaggtaagggggttagtctttatcataatcat 2029244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 7293365 - 7293333
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  7293365 taaggtaagggggttagtctttatcataatcat 7293333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 10989661 - 10989609
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  10989661 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 10989609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 11516576 - 11516544
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  11516576 taaggtaagggggttagtctttatcataatcat 11516544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 14113903 - 14113935
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  14113903 taaggtaagggggttagtctttatcataatcat 14113935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 15441478 - 15441510
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  15441478 taaggtaagggggttagtctttatcataatcat 15441510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 16919926 - 16919870
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggtta 73  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| |||||||||||    
T  16919926 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggtta 16919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 30262043 - 30262075
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  30262043 taaggtaagggggttagtctttatcataatcat 30262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 42056188 - 42056220
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  42056188 taaggtaagggggttagtctttatcataatcat 42056220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 196
Target Start/End: Complemental strand, 2437794 - 2437657
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttg-attatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||  |||||||||||||   || ||| || ||||||  ||||||||||||  | | || ||| |  ||| |||||||||||||||    
T  2437794 aaggtaagggggttagttattatcataatcatgtacaattt-tgcattttctcatgttgtatgaaaatgggataatgaacaattcttgctaaattcgtgc 2437696  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||    | || ||||||||||||||||||||||||||||    
T  2437695 tcttgttgtgatgttatgtttgtatgcatgaattgatgt 2437657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 371449 - 371417
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  371449 taaggtaagggggttagtcttcatcataatcat 371417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 3049937 - 3049905
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||| ||||||||||||||    
T  3049937 taaggtaagggggttagtttttatcataatcat 3049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 13321366 - 13321326
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattt 98  Q
    ||||||||||||||||||||| |||||||||||  ||||||    
T  13321366 taaggtaagggggttagtcttcatcataatcatgttcattt 13321326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 13377775 - 13377735
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  13377775 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 13377735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 13911024 - 13911076
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||    | || ||||||||||||||||||||||||||||    
T  13911024 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgt 13911076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 14113989 - 14114021
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaact 164  Q
    |||||| ||||||||||||||||||||||||||    
T  14113989 atggataattgttgctaaattcgtgctccaact 14114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Original strand, 14423639 - 14423671
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaact 164  Q
    |||||| ||||||||||||||||||||||||||    
T  14423639 atggataattgttgctaaattcgtgctccaact 14423671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 90
Target Start/End: Original strand, 15516765 - 15516793
Alignment:
Q  62 gtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||    
T  15516765 gtaagggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 15709501 - 15709428
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaatttt 127  Q
    ||||||||| || |||||||| |||||||||||||||||    ||||  | ||||||||||| |||||||||||    
T  15709501 taaggtaagaggattagtcttcatcataatcatcatcatcaattttgcaatttttcaaatgtggtatgaatttt 15709428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 25124482 - 25124450
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  25124482 taaggtaagggggttagtcttcatcataatcat 25124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 47480944 - 47480976
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  47480944 taaggtaagggggttagtcttcatcataatcat 47480976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 117; Significance: 9e-60; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 16404852 - 16405038
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttc 109  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||| |||||||    
T  16404852 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtcttcatcataatcatcatta-tttgtaaattttc 16404950  T
Q  110 aaatgttgtatgaatttt--gattatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||||||||   || |||||| ||| |||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  16404951 aaatgttgtatgaatttttgcatgatggataattattgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 16405038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 16193643 - 16193779
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||| |||||||||||||||||||||||||||| || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  16193643 taaggtaagggg-ttagtctttatcataatcatcatcatttggtaaattttcaaatattgtatgaattttgcttatggatgattgttgctaaattcgtgc 16193741  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||| || ||||||||||||||||||||||||    
T  16193742 tccaactatgatgatatgtttgtatgcatgaattgatg 16193779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 24928716 - 24928854
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 156  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  24928716 taaggtaatggggttagtctttatcataatcatcgtcattttgtgaaattttcaaatgttgtatgaattttgattatggataattgttgctaaattcgtg 24928815  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| || |  ||||||||||||||||||||||||    
T  24928816 ctccaactgtgattatatgtttgtatgcatgaattgatg 24928854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 43373392 - 43373531
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   || |||||| |||  ||||||||||||    
T  43373392 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgtataatggataattaatgctaaattcgt 43373491  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || || || |||||||||||||||||||||    
T  43373492 gctccaactgtgatgatacgtttgtatgcatgaattgatg 43373531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 274846 - 274766
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  274846 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 274766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 641003 - 641083
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  641003 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 826809 - 826889
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  826809 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 826889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 24716714 - 24716794
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  24716714 agaatcataggagcaaaagtgaagctagagctaatagttggtgataattaaggtaagggggttagtctttatcataatcat 24716794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 5238350 - 5238288
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  5238350 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 5238288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 22907214 - 22907276
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  22907214 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 22907276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 24661248 - 24661310
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  24661248 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 24661310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 43685809 - 43685747
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  43685809 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 43685747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 39115678 - 39115598
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| |||||| |||||||  |||||||||||||||| |||||| || |||||||||||    
T  39115678 agaatcataggagcaaaagtgaagcttgagctaatagttggtaataattaaggtaagggtgttagttttcatcataatcat 39115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 17345832 - 17345769
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| |||||||| |||||||||||| |||| || |||||||||| ||||||||||||||||    
T  17345832 atggataattgttgcgaaattcgtgctctaactgtgatgttatgtttatatgcatgaattgatg 17345769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 17285600 - 17285543
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | | ||| | |||| |||||||||||||||||||||||    
T  17285600 taggagctaaagtgaagcttgggttaggaattggtgataattaaggtaagggggttag 17285543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 21198005 - 21198062
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||| ||||||||||||    
T  21198005 taggagctaaagtgaagcttgggctaggaattggtgataattaagataagggggttag 21198062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 5238436 - 5238404
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  5238436 taaggtaagggggttagtctttatcataatcat 5238404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 22907128 - 22907160
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  22907128 taaggtaagggggttagtctttatcataatcat 22907160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 24385652 - 24385684
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  24385652 taaggtaagggggttagtctttatcataatcat 24385684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 24661162 - 24661194
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  24661162 taaggtaagggggttagtctttatcataatcat 24661194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 43685895 - 43685863
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  43685895 taaggtaagggggttagtctttatcataatcat 43685863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 6774258 - 6774309
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| ||||||||||  ||| || |||||||||||||||||||||||||||    
T  6774258 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatg 6774309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 24549233 - 24549182
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| ||||||||||  ||| || |||||||||||||||||||||||||||    
T  24549233 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatg 24549182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 2545297 - 2545265
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  2545297 taaggtaagggggttagtcttcatcataatcat 2545265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 3431176 - 3431208
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  3431176 taaggtaagggggttagtcttcatcataatcat 3431208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 22886686 - 22886654
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  22886686 taaggtaagggggttagtcttaatcataatcat 22886654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 30120974 - 30120922
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||| ||||    
T  30120974 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatttatgt 30120922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 48935 - 48798
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  48935 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 48836  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  48835 tccaactgtgatgatatgtttgtatgcatgaattgatg 48798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 61122 - 61154
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  61122 taaggtaagggggttagtcttcatcataatcat 61154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 42066 - 41929
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  42066 taaggtaagggggttggtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 41967  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  41966 tccaactgtgatgatatgtttgtatgcatgaattgatg 41929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 102; Significance: 8e-51; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 194
Target Start/End: Complemental strand, 1462 - 1325
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaa-ttttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  1462 taaggtaagggggttagtctttatcataatcatcatcattttgtgaaattttcaaatgttgtatgaatttttcttatggataattgttgctaaattcgtg 1363  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||||| || || |||||| ||||||||||||||||    
T  1362 ctccaactttgatgatatgttagtatgcatgaattgat 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 3508 - 3645
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||| |||||||||||||||||||    
T  3508 taaggtaagggggttagtctttgtcataatcatcttcattttgtaaattttcaaaagttgtatgaattttgattatagataattgttgctaaattcgtgc 3607  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  3608 tccaactgtgatgatatgtttgtatgcatgaattgatg 3645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 8e-51; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 172242 - 172105
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  172242 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtataaattttgattatggataactgttgctaaatacgtgc 172143  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || |||||||||||| |||||||||||    
T  172142 tccaactgtgatgatatgtttgtatggatgaattgatg 172105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 177945 - 177808
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| |||||    
T  177945 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtataaattttgattatggataactgttgctaaatacgtgc 177846  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || |||||||||||| |||||||||||    
T  177845 tccaactgtgatgatatgtttgtatggatgaattgatg 177808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 51110 - 51245
Alignment:
Q  60 aggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgctc 159  Q
    |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  51110 aggtaaggagattagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgctc 51209  T
Q  160 caactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| || || ||| ||||||||||||||||||||    
T  51210 caactgtgatgatatatttgtatgcatgaattgatg 51245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 98; Significance: 2e-48; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 36836 - 36976
Alignment:
Q  57 ttaaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcg 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||   || |||||| ||||||| ||||||||    
T  36836 ttaaggtaagggggttagtctttatcataatcatcatcattttgtgaaatttcaaatgttgtatgaatttttgcataatggataattgttgttaaattcg 36935  T
Q  155 tgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||| || || ||||||||||||||||||||||||    
T  36936 tgctccaactgtgatgatatgtttgtatgcatgaattgatg 36976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 15319 - 15398
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||  || ||||||||||    
T  15319 agaatcataggagcaaaagtgaagcttgggctaatagttggagataattaaggtaagggggttagcattcatcataatca 15398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 128095 - 128232
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  128095 taaggtaagggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtatgaattttgcttatggataattgttgctaaattcgtgc 128194  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    | ||||| || || ||||||||||||||||||||||||    
T  128195 ttcaactgtgatgatatgtttgtatgcatgaattgatg 128232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 97; Significance: 7e-48; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 247366 - 247505
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||||||||||||||    
T  247366 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgt 247465  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| |  || ||||||||||||||||||||||||    
T  247466 gctccaactgtaatgatatgtttgtatgcatgaattgatg 247505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 159
Target Start/End: Original strand, 34075 - 34177
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttc-aaatgttgtatgaattttgattatggatgattgttgctaaattcgtg 156  Q
    ||||||||||||||||||||| |||||||||||  ||| ||| || ||||||  | ||||||||||| |  | | ||| |  ||||||||||||||||||    
T  34075 taaggtaagggggttagtcttcatcataatcatgttcaatttttgcattttctcattgttgtatgaaatgggttgatgaaaaattgttgctaaattcgtg 34174  T
Q  157 ctc 159  Q
    |||    
T  34175 ctc 34177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 5990 - 6127
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||  ||| ||||  |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5990 taaggtaagggggttagtctttatcataatcattttcactttgcaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 6089  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  6090 tccaactgtgatgatatgtttgtatgcatgaattgatg 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 882 - 1019
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||| ||| |||   |||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  882 taaggtaagggggttagtctttatcataatcatcttcactttacaaattctcaaatgttgtatgaattgtgattatggataattgttgctaaattcgtgc 981  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  982 tccaactgtgatgatatgtttgtatgcatgaattgatg 1019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 23153786 - 23153647
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| |||||| ||||||||||    
T  23153786 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgtttctaaattcgt 23153687  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || || ||||||||||||||||||||||||    
T  23153686 gctccaactgtgatgatatgtttgtatgcatgaattgatg 23153647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 59 - 195
Target Start/End: Original strand, 14626045 - 14626181
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgct 158  Q
    |||||||||||||||||  |||||| ||||||| ||| |||   |||| ||||||||||| |||||| ||||||||||| ||| ||||||||||||||||    
T  14626045 aaggtaagggggttagttattatcacaatcatcttcactttacaaattctcaaatgttgtttgaattgtgattatggataattattgctaaattcgtgct 14626144  T
Q  159 ccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |   || || |||||||||||||||||||||||||||    
T  14626145 cttgctgtgatgttatgtttgtatgcatgaattgatg 14626181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 19983144 - 19983224
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  19983144 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 19983224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 35015009 - 35015089
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  35015009 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcataatcat 35015089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 58 - 127
Target Start/End: Complemental strand, 23148335 - 23148266
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt 127  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  23148335 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttt 23148266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 18583720 - 18583640
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || |||||||||||    
T  18583720 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagttttcatcataatcat 18583640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 1657748 - 1657811
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||| |||||||||||||||    
T  1657748 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttggatgcatgaattgatg 1657811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 15862734 - 15862671
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| |||||| |||||||||||||| |||| || |||||||||||||||||||||||||||    
T  15862734 atggataattgttactaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatg 15862671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 35009439 - 35009502
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||||||||| |||| || ||||| |||||||||||||||||||||    
T  35009439 atggataattgttgctaaattcgtgctctaactgtgatgttaagtttgtatgcatgaattgatg 35009502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 21623563 - 21623506
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  21623563 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 21623506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 25175815 - 25175763
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || |||||||||||||||||||||||||||||||    
T  25175815 tgctaaattcgtgctcttgctgtgttgttatgtttgtatgcatgaattgatgt 25175763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 27751688 - 27751625
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| | ||| ||||||||||||||| || | || |||||||||||||||||||||||||||    
T  27751688 atggataaatgtagctaaattcgtgctctaattgtgatgttatgtttgtatgcatgaattgatg 27751625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 1650020 - 1650053
Alignment:
Q  57 ttaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||||    
T  1650020 ttaaggtaagggggttagtctttatcataatcat 1650053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 22361619 - 22361676
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| |  |||| | |||| |||||||||||||||||||||||    
T  22361619 taggagctaaagtgaagcttggcctaggaattggtgataattaaggtaagggggttag 22361676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 14152704 - 14152632
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    ||||||||||||||||||| | ||||| | || | | ||||||||| |||||||||| |||| ||||||||||    
T  14152704 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggcaagggggttattcttcatcataatca 14152632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 16825752 - 16825804
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  16825752 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 16825804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 18002395 - 18002427
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  18002395 taaggtaagggggttagtctttatcataatcat 18002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 23995279 - 23995247
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  23995279 taaggtaagggggttagtctttatcataatcat 23995247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 26090091 - 26090059
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  26090091 taaggtaagggggttagtctttatcataatcat 26090059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 4991427 - 4991396
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||    
T  4991427 aaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 88
Target Start/End: Original strand, 15742120 - 15742150
Alignment:
Q  58 taaggtaagggggttagtctttatcataatc 88  Q
    |||||||||||||||||||||||||||||||    
T  15742120 taaggtaagggggttagtctttatcataatc 15742150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 1657661 - 1657693
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  1657661 taaggtaagggggttagtcttcatcataatcat 1657693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 15862821 - 15862781
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattt 98  Q
    ||||||||||||||||||||| |||||||||||  ||||||    
T  15862821 taaggtaagggggttagtcttcatcataatcatgttcattt 15862781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 18399184 - 18399144
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  18399184 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 18399144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 18823283 - 18823315
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  18823283 taaggtaagggggttagtcttcatcataatcat 18823315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 18839138 - 18839170
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  18839138 taaggtaagggggttagtcttcatcataatcat 18839170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 27653983 - 27654035
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||| ||||||||||||||||||||    
T  27653983 tgctaaattcgtgctcttgctgtgatgttatgcttgtatgcatgaattgatgt 27654035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 27751774 - 27751742
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  27751774 taaggtaagggggttagtcttcatcataatcat 27751742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 32276659 - 32276691
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  32276659 taaggtaagggggttagtcttcatcataatcat 32276691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 26340 - 26478
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaa-ttttgattatggatgattgttgctaaattcgtg 156  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| || ||| || ||||||||||||||||||    
T  26340 taaggtaagggggttagtctttatcataatcatgatcattttgtaaattttcaaatgttgtatgaatttttcataatgtataattgttgctaaattcgtg 26439  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| || || ||||||||||||| ||||||||||    
T  26440 ctccaactttgatgatatgtttgtatgcgtgaattgatg 26478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 8180 - 8240
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattg 192  Q
    |||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||    
T  8180 atggataattgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 6877 - 6934
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    |||||| |||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  6877 taggagttaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 1e-43; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 23507302 - 23507165
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |  ||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  23507302 taaggtaagggggttagtctttatcataatcatctccattttgtaagatttcaaatgttgtatgaattttgcttatggataattgttgctaaattcgtgc 23507203  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||  | || || ||||||||||||||||||||||||    
T  23507202 tccatttgtgatgatatgtttgtatgcatgaattgatg 23507165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 27182471 - 27182610
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||   || |||||| ||||||||||||||| |    
T  27182471 taaggtaagggggttagtcttcatcataatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcat 27182570  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || || |||||||||||||||||| |||||    
T  27182571 gctccaactgtgatgatatgtttgtatgcatgaactgatg 27182610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 18530988 - 18531130
Alignment:
Q  58 taaggtaagggggttagtctttatcataatc---atcatcattttgtgaattttcaaatgttgtatgaat-tttgattat-ggatgattgttgctaaatt 152  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||  | ||||||||||| |||||||| ||| || || |||| ||||||||||||||    
T  18530988 taaggtaagggggttagtcttcatcataatcgtcatcatcattttgcaatttttcaaatgtggtatgaatgtttcataattggataattgttgctaaatt 18531087  T
Q  153 cgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||||| || || ||||||||||||||||||||||||    
T  18531088 cgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 18531130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 22053753 - 22053896
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat--tttgtgaa--ttttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||||||||||||||| |||||||||||||||||  ||| ||||  ||||||||||| |||||||||||   ||  ||||| |||||||||||||    
T  22053753 taaggtaagggggttagtcttcatcataatcatcatcatcatttttgaaatttttcaaatgtggtatgaatttttcataattggataattgttgctaaat 22053852  T
Q  152 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||||||| || || |||||||||||| |||||||||||    
T  22053853 tcgtgctccaactgtgatgatatgtttgtatgtatgaattgatg 22053896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 20623232 - 20623170
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  20623232 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 20623170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 21233528 - 21233590
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  21233528 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 21233590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 37053007 - 37052945
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  37053007 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 37052945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 25900408 - 25900469
Alignment:
Q  134 ggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  25900408 ggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgatg 25900469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 16536460 - 16536401
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaatt 191  Q
    |||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||    
T  16536460 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaatt 16536401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 34939540 - 34939477
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| | ||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  34939540 atggataactgttgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatg 34939477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 11584448 - 11584374
Alignment:
Q  15 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||  || ||||||||||    
T  11584448 cataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagaattcatcataatca 11584374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 5450695 - 5450768
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | |||   ||||||||||||||||||||||  || |||||||||||    
T  5450695 taggagctaaagtgaagcttgggctaggaattgataataattaaggtaagggggttagaattcatcataatcat 5450768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 21222462 - 21222519
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| ||||||||||||| |||||||||    
T  21222462 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtatgggggttag 21222519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 12626 - 12574
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  12626 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 12574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 16105999 - 16105967
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  16105999 taaggtaagggggttagtctttatcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 19500151 - 19500099
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  19500151 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 19500099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 20623318 - 20623286
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  20623318 taaggtaagggggttagtctttatcataatcat 20623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 21233442 - 21233474
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  21233442 taaggtaagggggttagtctttatcataatcat 21233474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 22366481 - 22366533
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  22366481 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 22366533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 25426880 - 25426828
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  25426880 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 25426828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 25900320 - 25900352
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  25900320 taaggtaagggggttagtctttatcataatcat 25900352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 37053093 - 37053061
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  37053093 taaggtaagggggttagtctttatcataatcat 37053061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 29188284 - 29188335
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| ||||||||||  ||| || |||||||||||||||||||||||||||    
T  29188284 tgctagattcgtgctcttactgtgatgttatgtttgtatgcatgaattgatg 29188335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 18777995 - 18778044
Alignment:
Q  147 taaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    |||||||||||||   || || ||||||||||||||||||||||||||||    
T  18777995 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 18778044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 43443398 - 43443447
Alignment:
Q  147 taaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    |||||||||||||   || || ||||||||||||||||||||||||||||    
T  43443398 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 43443447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 108728 - 108760
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  108728 taaggtaagggggttagtcttcatcataatcat 108760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 4199985 - 4200037
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||    | || ||||||||||||||||||||||||||||    
T  4199985 tgctaaattcgtgctcttgttgtgatgttatgtttgtatgcatgaattgatgt 4200037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 9730278 - 9730310
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  9730278 taaggtaagggggttagtcttcatcataatcat 9730310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 11211983 - 11212047
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaa 123  Q
    |||||||||||||||||  |||||||||||||  ||| ||| || ||||||  ||||||||||||    
T  11211983 aaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatgttgtatgaa 11212047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 16536546 - 16536514
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||||||||||||||||||||||    
T  16536546 taagataagggggttagtctttatcataatcat 16536514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 16595753 - 16595713
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  16595753 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 16595713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 21073595 - 21073647
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || |||||||||||||||||||||| |||||    
T  21073595 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatggatgt 21073647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 12450 - 12313
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaa-ttttgattatggatgattgttgctaaattcgtg 156  Q
    |||||||||||||||||||||||||||||||||| | ||||||| || ||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  12450 taaggtaagggggttagtctttatcataatcatcttaattttgt-aactttcaaatgctgtatgaaattttgattatggataattgttgctaaattcgtg 12352  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||| |||| || || ||||||||||||||||||||||||    
T  12351 ctctaactgtgatgatatgtttgtatgcatgaattgatg 12313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 9215 - 9078
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||  |||||||||| |||||| |||||||| |||||||  |||||||||||||||||||    
T  9215 taaggtaagggggttagtctttatcataatcatcttcattttgcaaattttcaaaagttgtacgaattttgcttatggaaaattgttgctaaattcgtgc 9116  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||  | || |||||||||||||||||||||| ||||    
T  9115 tccatttgtgatgttatgtttgtatgcatgaatcgatg 9078  T

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Target: scaffold0009 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 272362 - 272225
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| | | ||||||||| ||| |    
T  272362 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatattgtataaattttgattatggataaatattgctaaatacgtac 272263  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| |  || |||||||||||| |||||||||||    
T  272262 tccaactgtaatgatatgtttgtatgaatgaattgatg 272225  T

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Target: scaffold0028 (Bit Score: 85; Significance: 1e-40; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 89378 - 89517
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||| ||||||||||   || |||||| |||||||||||||||||    
T  89378 taaggtaagggggttagtcttcatcatgatcatcatcattttgtaaattttcaaatgttctatgaatttttgcataatggataattgttgctaaattcgt 89477  T
Q  156 gctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||||| || || ||| ||||||||||||||||||||    
T  89478 gctccaactgtgatgatatatttgtatgcatgaattgatg 89517  T

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Target: scaffold0028; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 107708 - 107835
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaatttt--gattatggatgattgttgctaaattcgt 155  Q
    ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||   || |||||| ||| |||||||||||||    
T  107708 taaggtaagggggttagtcttcatcatgatcatcatcattttgtaaattttcaaatgttgtatgaatttttgcataatggataatttttgctaaattcgt 107807  T
Q  156 gctccaactatgttgttatgtttgtatg 183  Q
    ||||||||| || || ||| ||||||||    
T  107808 gctccaactgtgatgatatatttgtatg 107835  T

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Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 90
Target Start/End: Complemental strand, 130911 - 130880
Alignment:
Q  59 aaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||    
T  130911 aaggtaagggggttagtctttatcataatcat 130880  T

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Target: scaffold0195 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 19543 - 19406
Alignment:
Q  61 ggtaagggggttagtctttatcataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||| |||||||||||||| ||||| || |||||||||||||||||||||||||   || |||||| |||||||||||||||||||    
T  19543 ggtaagggggttagtcttcatcataatcatcataatttttgtaaattttcaaatgttgtatgaatttttgcataatggataattgttgctaaattcgtgc 19444  T
Q  158 tccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||||| || || ||||||||||||||||||||||||    
T  19443 tccaactgtgatgatatgtttgtatgcatgaattgatg 19406  T

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Target: scaffold0195; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 21553 - 21490
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  21553 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 21490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 81; Significance: 3e-38; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 158
Target Start/End: Complemental strand, 146938 - 146838
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgattatggatgattgttgctaaattcgtgc 157  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||| |||||||| |||    
T  146938 taaggtaagggggttagtctttatcataatcatcatcattttgtaaattttcaaatgttgtatgaattttgcttatggataattgttcctaaattcatgc 146839  T
Q  158 t 158  Q
    |    
T  146838 t 146838  T

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Target: scaffold0025; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 9192 - 9049
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcat----tttgtgaattttcaaatgttgtatgaattttgatta--tggatgattgttgctaaat 151  Q
    ||||||||| | ||||||||| |||||||||||||||||    ||||  | ||||||||||| ||||| |||||   ||  ||||| |||||||||||||    
T  9192 taaggtaagtgtgttagtcttcatcataatcatcatcatcatttttgcaatttttcaaatgtggtatgtatttttcataattggataattgttgctaaat 9093  T
Q  152 tcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||| || || || ||||||||||||||||||||||||    
T  9092 tcgtgctccatctgtgatgatatgtttgtatgcatgaattgatg 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 100 - 195
Target Start/End: Complemental strand, 149018 - 148921
Alignment:
Q  100 gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    ||||| ||||||||||||||||||||||   || || ||| ||||||| |||||| ||||||||||| || || ||||||||||||||||||||||||    
T  149018 gtgaaatttcaaatgttgtatgaatttttgcataattgataattgttgttaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 148921  T

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Target: scaffold0218 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 68 - 195
Target Start/End: Original strand, 4996 - 5124
Alignment:
Q  68 gggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaa-ttttgattatggatgattgttgctaaattcgtgctccaactat 166  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||| || |||||| ||||||||||||||||| |||||||| |    
T  4996 gggttagtctttatcataatcattatcattttgtaaattttcaaatgttgtatgaatttttcataatggataattgttgctaaattcgtactccaactgt 5095  T
Q  167 gttgttatgtttgtatgcatgaattgatg 195  Q
    |  | ||||||||||||| ||||||||||    
T  5096 gacgatatgtttgtatgcgtgaattgatg 5124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 58 - 195
Target Start/End: Original strand, 123087 - 123227
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcatttt-gtgaattttcaaatgttgtatgaattttg--attatggatgattgttgctaaattcg 154  Q
    ||||||||||||||||||||| | |||||||||||| ||||| || ||||| |||||||||||||||||||   || |||||| ||||||||||||||||    
T  123087 taaggtaagggggttagtcttcaccataatcatcataatttttgtaaatttgcaaatgttgtatgaatttttgcataatggataattgttgctaaattcg 123186  T
Q  155 tgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| | || || ||||||||||||||||||||||||    
T  123187 tgctccaattgtgatgatatgtttgtatgcatgaattgatg 123227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 80267 - 80187
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  80267 agaatcataggagcaaaagtgaagcttgagctaatagttggagataattaaggtaagggggttagtctttatcataatcat 80187  T

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Target: scaffold0016 (Bit Score: 62; Significance: 6e-27; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 166116 - 166197
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatc 91  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  166116 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatc 166197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 162036 - 162111
Alignment:
Q  16 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatc 91  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||    
T  162036 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcatc 162111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 116410 - 116483
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||  || |||||||||||    
T  116410 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttagatttcatcataatcat 116483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 31132 - 31212
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31132 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 31212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 61; Significance: 2e-26; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 41712 - 41632
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||    
T  41712 agaatcataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagtttttatcacaatcat 41632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 37066 - 37128
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  37066 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 37128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 36980 - 37012
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  36980 taaggtaagggggttagtctttatcataatcat 37012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 5735 - 5809
Alignment:
Q  16 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  5735 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 5809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686; HSP #2
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 5941 - 6015
Alignment:
Q  16 ataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||    
T  5941 ataggagcaaaagtgaagctagagctaatagttggagataattaaggtaagggggttagttttcatcataatcat 6015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 304 - 385
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcatc 91  Q
    |||| ||||||||| ||||||||||| |||||| ||||||| |||||||||||||| ||||||| |||||||||||||||||    
T  304 agaatcataggagcaaaagtgaagcttgagctaatagttggtgataattaaggtaacggggttattctttatcataatcatc 385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 42754 - 42677
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||   ||||||||||||||||| ||||||||||||||    
T  42754 agaatcataggagcaaaagtgaagctagagctaatagttggagata---aaggtaagggggttagtttttatcataatcat 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 13769 - 13706
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  13769 atggataattgttgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattgatg 13706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 13856 - 13824
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  13856 taaggtaagggggttagtcttcatcataatcat 13824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 49; Significance: 3e-19; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 5785 - 5729
Alignment:
Q  139 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  5785 attgttgctaaattcgtgctccaactttgatgttatgtttgtatgcatgaattgatg 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 5878 - 5846
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||| |||||||||    
T  5878 taaggtaagggggttagtctttaccataatcat 5846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 534 - 597
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| |||||||||||||||||||||||||| || || ||||||||||||||||||||||||    
T  534 atggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattgatg 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1164 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 1780 - 1701
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  1780 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 19802 - 19881
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  19802 agaatcataggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 19881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 24106 - 24185
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  24106 agaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 24185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 5e-18; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Complemental strand, 27058 - 26996
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  27058 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 26996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 194
Target Start/End: Complemental strand, 22796 - 22741
Alignment:
Q  139 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  22796 attgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 22741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 22889 - 22857
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  22889 taaggtaagggggttagtctttatcataatcat 22857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 27144 - 27112
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  27144 taaggtaagggggttagtctttatcataatcat 27112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 132 - 194
Target Start/End: Original strand, 1582 - 1644
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgat 194  Q
    |||||| |||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  1582 atggataattgttgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattgat 1644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 1496 - 1528
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  1496 taaggtaagggggttagtctttatcataatcat 1528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Complemental strand, 41911 - 41848
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||||||| ||||||||||||| |||| || |||||||||||||||||||||||||||    
T  41911 atggataattgttgttaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatg 41848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 98
Target Start/End: Complemental strand, 41997 - 41957
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattt 98  Q
    ||||||||||||||||||||| |||||||||||  ||||||    
T  41997 taaggtaagggggttagtcttcatcataatcatgttcattt 41957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 132 - 195
Target Start/End: Original strand, 34460 - 34523
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||| ||| ||||||||||||||||| |||| || |||||||||||||||||||||||||||    
T  34460 atggataattattgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattgatg 34523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 20572 - 20493
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    |||| ||||||||| ||| ||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  20572 agaatcataggagcaaaaatgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 20493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 195
Target Start/End: Complemental strand, 48443 - 48387
Alignment:
Q  139 attgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||||||||||||||||||| |  || ||||||||||||||||||||||||    
T  48443 attgttgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattgatg 48387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 164 - 94
Alignment:
Q  19 ggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    ||||| ||||||||||| ||| || ||||||| |||||||||||||||||||||||| || ||||||||||    
T  164 ggagcaaaagtgaagcttgagttaatagttggtgataattaaggtaagggggttagtgttcatcataatca 94  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 6261 - 6335
Alignment:
Q  15 cataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatca 89  Q
    ||||||||| ||||||||||| ||| || |||| || |||||||||||||||||||||||| || ||||||||||    
T  6261 cataggagcaaaagtgaagcttgagttaatagtgggtgataattaaggtaagggggttagtgttcatcataatca 6335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 4 - 41
Alignment:
Q  52 gataattaaggtaagggggttagtctttatcataatca 89  Q
    |||||||||||||||||||||||| || ||||||||||    
T  4 gataattaaggtaagggggttagtgttcatcataatca 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 108085 - 107947
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaattttgatt-atggatgattgttgctaaattcgtg 156  Q
    ||||||||||||||||||  | || ||||||||  ||| ||| || ||||||  ||||||||||||  | | || ||| |  |||||| |||||||||||    
T  108085 taaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttactaaattcgtg 107986  T
Q  157 ctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||| |  || ||||||||||||||||||||||||    
T  107985 ctccaactgtaatgatatgtttgtatgcatgaattgatg 107947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 147 - 189
Target Start/End: Original strand, 89863 - 89905
Alignment:
Q  147 taaattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    ||||||||||||||||||||| || ||||||||||||||||||    
T  89863 taaattcgtgctccaactatgatgatatgtttgtatgcatgaa 89905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 1363 - 1436
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    ||||| ||||||||||||| ||||||| | |||| ||||||| |||||||||||||||  || |||||||||||    
T  1363 taggaactaaagtgaagcttgagctaggaattggtgataattgaggtaagggggttagaattcatcataatcat 1436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 35873 - 35816
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||| |||||||||||||||||||||||    
T  35873 taggagctaaagtgaagcttgggctaggaattggtgataattaaggtaagggggttag 35816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 30497 - 30417
Alignment:
Q  10 agaagcataggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttagtctttatcataatcat 90  Q
    |||| ||||| ||| ||||||||||| ||| || || |||| |||||||||||||||||||||| | || |||||||||||    
T  30497 agaatcatagaagcaaaagtgaagcttgagttaataattggtgataattaaggtaagggggttatttttcatcataatcat 30417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 499 - 442
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| ||||||| | |||| ||||| | |||||||||||||||    
T  499 taggagctaaagtgaagcttgagctaggaattggtgataactgaggtaagggggttag 442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 76699 - 76756
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | |||  |||||||||||||||||||||||    
T  76699 taggagctaaagtgaagcttgggctaggaattgctgataattaaggtaagggggttag 76756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 90
Target Start/End: Original strand, 193396 - 193429
Alignment:
Q  57 ttaaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||||||||||||||||    
T  193396 ttaaggtaagggggttagtctttatcataatcat 193429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 1304 - 1356
Alignment:
Q  144 tgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatgt 196  Q
    ||||||||||||||||   || || ||||||||||||||||||||||||||||    
T  1304 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattgatgt 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 6443 - 6475
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  6443 taaggtaagggggttagtctttatcataatcat 6475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 878 - 910
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  878 taaggtaagggggttagtctttatcataatcat 910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 9882 - 9914
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  9882 taaggtaagggggttagtctttatcataatcat 9914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 13285 - 13317
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  13285 taaggtaagggggttagtctttatcataatcat 13317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 57392 - 57424
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  57392 taaggtaagggggttagtctttatcataatcat 57424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 70307 - 70348
Alignment:
Q  148 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||| ||||||||||| || ||||||||||||||||||    
T  70307 aaattcgtactccaactatgatgatatgtttgtatgcatgaa 70348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 55936 - 55904
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  55936 taaggtaagggggttagtctttatcataatcat 55904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 108075 - 108107
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||||||||||||||||||    
T  108075 taaggtaagggggttagtctttatcataatcat 108107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 3453 - 3394
Alignment:
Q  132 atggatgattgttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaatt 191  Q
    |||||| |||| |||||||||||||||| | || || ||||| |||||||||||||||||    
T  3453 atggataattgatgctaaattcgtgctctagctgtgatgttaagtttgtatgcatgaatt 3394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 18058 - 18015
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgt 101  Q
    ||||||||||||||||||||| ||||||||||| || |||||||    
T  18058 taaggtaagggggttagtcttcatcataatcataattattttgt 18015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 689 - 632
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | || | |||||||| ||||||||||||||    
T  689 taggagctaaagtgaagcttgggctaggaattagtgataattatggtaagggggttag 632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 1492 - 1557
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcatcatcattttgtgaattttcaaatgttgtatgaa 123  Q
    ||||||||||||||||||  |||||||||||||  ||| ||| || ||||||  ||||||||||||    
T  1492 taaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatgttgtatgaa 1557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 7056 - 6999
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||| | | ||||| | |||| |||||||| ||||||||||||||    
T  7056 taggagctaaagtgaaggttgggctaggaattggtgataattatggtaagggggttag 6999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 30; Significance: 0.00000007; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 1546 - 1587
Alignment:
Q  148 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  1546 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 1587  T

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Target: scaffold0456; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 8691 - 8732
Alignment:
Q  148 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  8691 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8732  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 8257 - 8216
Alignment:
Q  148 aaattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||| ||||||| || ||||||||||||||||||    
T  8257 aaattcgtgctctaactatgatgatatgtttgtatgcatgaa 8216  T

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Target: scaffold0080 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 43651 - 43708
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  43651 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 43708  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 31414 - 31357
Alignment:
Q  17 taggagctaaagtgaagctagagctagtagttggagataattaaggtaagggggttag 74  Q
    ||||||||||||||||||| | ||||| | || | | |||||||||||||||||||||    
T  31414 taggagctaaagtgaagcttgggctaggaatttgtgctaattaaggtaagggggttag 31357  T

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Target: scaffold0589 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 8051 - 8011
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  8051 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 8011  T

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Target: scaffold0529 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 3215 - 3163
Alignment:
Q  143 ttgctaaattcgtgctccaactatgttgttatgtttgtatgcatgaattgatg 195  Q
    |||||||||||||||||   || || |||||||||||||| ||||||||||||    
T  3215 ttgctaaattcgtgctcttgctgtgatgttatgtttgtatccatgaattgatg 3163  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 17209 - 17241
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  17209 taaggtaagggggttagtcttcatcataatcat 17241  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 5476 - 5508
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  5476 taaggtaagggggttagtcttcatcataatcat 5508  T

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Target: scaffold0303 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 4346 - 4378
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||| |||||||||||||||    
T  4346 taaggtaagggggttagactttatcataatcat 4378  T

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Target: scaffold0243 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 2317 - 2357
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  2317 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 2357  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 17304 - 17336
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||| |||||||||||||||||||||||    
T  17304 taaggtaagcgggttagtctttatcataatcat 17336  T

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Target: scaffold0173 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 5581 - 5549
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  5581 taaggtaagggggttagtcttcatcataatcat 5549  T

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Target: scaffold0118 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 34308 - 34340
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  34308 taaggtaagggggttagtcttcatcataatcat 34340  T

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Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 3565 - 3525
Alignment:
Q  149 aattcgtgctccaactatgttgttatgtttgtatgcatgaa 189  Q
    |||||||||||||| |||| ||||||||||| |||||||||    
T  3565 aattcgtgctccaattatgatgttatgtttgaatgcatgaa 3525  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Complemental strand, 45370 - 45338
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    ||||||||||||||||||||| |||||||||||    
T  45370 taaggtaagggggttagtcttcatcataatcat 45338  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 12418 - 12450
Alignment:
Q  58 taaggtaagggggttagtctttatcataatcat 90  Q
    |||||||||||||||||| ||||||||||||||    
T  12418 taaggtaagggggttagtttttatcataatcat 12450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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