View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11061_low_15 (Length: 296)
Name: NF11061_low_15
Description: NF11061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11061_low_15 |
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Alignment Details
Target: chr3 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 276
Target Start/End: Original strand, 47036237 - 47036512
Alignment:
| Q |
1 |
gcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaatagagataaattccattgctcattactatctattaagtcttcta |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036237 |
gcactaggctccttatgtcaaggactatatcatctaacaagtggctatttatttaatagagataaattccattgctcattactatctattaagtcttcta |
47036336 |
T |
|
| Q |
101 |
ctttcatattactcaaactatttgggacatgtcctttgctatccattaatctcacacccgtttcatcaaacaagcttgtgattcataacatcaagcccct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036337 |
ctttcatattactcaaactatttgggacatgtcctttgctatccattaatctcacacccgtttcatcaaacaagcttgtgattcataacatcaagcccct |
47036436 |
T |
|
| Q |
201 |
ttgtgccaagacctcccatatttctagggagagtaaatttgtcccactttactgcatcagaaaattgtttttgctg |
276 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47036437 |
ttgtgccaagacctcccatatttctagggagagtaaatttgtcccactttactgcatcagaaaattgtttttgctg |
47036512 |
T |
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