View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11063_low_7 (Length: 232)

Name: NF11063_low_7
Description: NF11063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11063_low_7
NF11063_low_7
[»] chr2 (30 HSPs)
chr2 (1-182)||(3001271-3001448)
chr2 (1-71)||(34041595-34041665)
chr2 (3-70)||(35916086-35916153)
chr2 (14-70)||(4438999-4439055)
chr2 (1-71)||(4060221-4060291)
chr2 (1-71)||(37480074-37480144)
chr2 (1-71)||(39714991-39715061)
chr2 (17-70)||(5147702-5147755)
chr2 (1-70)||(40416397-40416466)
chr2 (1-70)||(42327402-42327471)
chr2 (14-70)||(16381674-16381730)
chr2 (3-74)||(7799044-7799115)
chr2 (14-69)||(16918598-16918653)
chr2 (15-70)||(19244109-19244164)
chr2 (14-72)||(14500275-14500333)
chr2 (4-66)||(24191842-24191904)
chr2 (1-71)||(29503270-29503340)
chr2 (17-71)||(42602553-42602607)
chr2 (14-71)||(11738064-11738121)
chr2 (1-70)||(18259730-18259799)
chr2 (11-71)||(29197393-29197453)
chr2 (14-70)||(42922414-42922470)
chr2 (4-70)||(12994386-12994452)
chr2 (4-70)||(42860348-42860414)
chr2 (14-71)||(1729815-1729872)
chr2 (1-70)||(28846691-28846760)
chr2 (14-70)||(1435064-1435120)
chr2 (42-70)||(9318122-9318150)
chr2 (18-70)||(32106566-32106618)
chr2 (31-71)||(36042345-36042385)
[»] chr3 (37 HSPs)
chr3 (13-72)||(5499426-5499485)
chr3 (1-69)||(47454624-47454692)
chr3 (1-72)||(10499116-10499187)
chr3 (14-72)||(26988994-26989051)
chr3 (1-70)||(2597227-2597296)
chr3 (14-67)||(28928899-28928952)
chr3 (1-70)||(37788472-37788541)
chr3 (14-71)||(46518627-46518684)
chr3 (14-70)||(4222141-4222197)
chr3 (14-70)||(31788990-31789046)
chr3 (1-72)||(31520612-31520683)
chr3 (32-70)||(203090-203128)
chr3 (1-71)||(9557319-9557389)
chr3 (1-71)||(19154630-19154700)
chr3 (1-71)||(30311305-30311375)
chr3 (2-63)||(4844519-4844580)
chr3 (2-63)||(4870215-4870276)
chr3 (1-70)||(14186648-14186716)
chr3 (1-66)||(49494153-49494218)
chr3 (14-70)||(16354912-16354968)
chr3 (37-72)||(27093404-27093439)
chr3 (1-63)||(2667869-2667931)
chr3 (14-72)||(7975416-7975474)
chr3 (1-71)||(8368806-8368876)
chr3 (1-70)||(10445146-10445216)
chr3 (4-70)||(35111180-35111246)
chr3 (1-71)||(36720380-36720450)
chr3 (4-70)||(40063619-40063685)
chr3 (16-70)||(42430335-42430388)
chr3 (1-62)||(11612307-11612368)
chr3 (1-62)||(12761520-12761581)
chr3 (11-72)||(36797685-36797746)
chr3 (10-67)||(53473368-53473425)
chr3 (42-70)||(8796140-8796168)
chr3 (14-70)||(19341801-19341857)
chr3 (3-59)||(32651447-32651503)
chr3 (39-71)||(34622567-34622599)
[»] scaffold0118 (1 HSPs)
scaffold0118 (1-70)||(41640-41709)
[»] chr1 (41 HSPs)
chr1 (1-73)||(51814491-51814563)
chr1 (1-72)||(25297770-25297841)
chr1 (1-70)||(19528334-19528403)
chr1 (16-67)||(24730387-24730438)
chr1 (4-71)||(40257398-40257465)
chr1 (10-72)||(26232402-26232464)
chr1 (20-70)||(38978968-38979018)
chr1 (1-59)||(52336781-52336839)
chr1 (14-71)||(8904413-8904470)
chr1 (16-73)||(29817672-29817729)
chr1 (14-71)||(34460929-34460986)
chr1 (14-70)||(9165215-9165271)
chr1 (1-68)||(33700780-33700847)
chr1 (4-66)||(17745266-17745328)
chr1 (1-70)||(2799862-2799931)
chr1 (14-71)||(8177202-8177259)
chr1 (1-66)||(9224779-9224844)
chr1 (14-71)||(36371469-36371526)
chr1 (10-63)||(42983390-42983443)
chr1 (14-70)||(31794284-31794340)
chr1 (14-70)||(44961765-44961821)
chr1 (3-70)||(11068852-11068919)
chr1 (4-63)||(17410238-17410297)
chr1 (14-73)||(41508828-41508887)
chr1 (1-67)||(15786327-15786393)
chr1 (3-57)||(28411343-28411397)
chr1 (4-50)||(36124853-36124899)
chr1 (4-70)||(37400274-37400340)
chr1 (15-69)||(44126396-44126450)
chr1 (14-71)||(2074001-2074057)
chr1 (14-71)||(4566547-4566604)
chr1 (1-70)||(16893394-16893463)
chr1 (1-70)||(30420310-30420379)
chr1 (14-63)||(47720837-47720886)
chr1 (14-63)||(47727829-47727878)
chr1 (14-70)||(11438504-11438560)
chr1 (14-70)||(12259260-12259316)
chr1 (22-66)||(14787364-14787408)
chr1 (14-70)||(16169998-16170054)
chr1 (14-66)||(19088213-19088265)
chr1 (14-70)||(51703779-51703835)
[»] chr4 (26 HSPs)
chr4 (3-70)||(46545711-46545778)
chr4 (1-70)||(47044717-47044786)
chr4 (1-70)||(37109358-37109427)
chr4 (1-70)||(51948480-51948549)
chr4 (4-71)||(21660154-21660221)
chr4 (4-71)||(21668918-21668985)
chr4 (4-71)||(51250532-51250599)
chr4 (16-70)||(1730511-1730565)
chr4 (4-66)||(13901746-13901808)
chr4 (21-71)||(27965537-27965587)
chr4 (1-70)||(28635696-28635765)
chr4 (1-66)||(43623451-43623516)
chr4 (14-70)||(9936981-9937037)
chr4 (1-73)||(12798681-12798753)
chr4 (14-49)||(25869597-25869632)
chr4 (1-71)||(7949461-7949531)
chr4 (17-75)||(9241048-9241106)
chr4 (16-70)||(37443702-37443756)
chr4 (1-67)||(52254411-52254477)
chr4 (5-70)||(19238588-19238653)
chr4 (1-70)||(39509070-39509139)
chr4 (37-70)||(45060978-45061011)
chr4 (1-70)||(55427207-55427276)
chr4 (16-72)||(29195093-29195149)
chr4 (14-70)||(31826609-31826665)
chr4 (19-67)||(51346483-51346531)
[»] chr8 (35 HSPs)
chr8 (1-71)||(3826784-3826854)
chr8 (1-71)||(16852339-16852409)
chr8 (1-71)||(19703494-19703564)
chr8 (15-70)||(20994479-20994534)
chr8 (16-72)||(17727448-17727504)
chr8 (14-68)||(2203494-2203548)
chr8 (1-67)||(2792646-2792712)
chr8 (1-71)||(4830486-4830556)
chr8 (1-70)||(968362-968431)
chr8 (13-70)||(6569790-6569847)
chr8 (14-71)||(18897165-18897222)
chr8 (1-70)||(23361656-23361725)
chr8 (14-71)||(28783059-28783116)
chr8 (13-70)||(35826311-35826368)
chr8 (16-68)||(3624582-3624634)
chr8 (3-71)||(5264543-5264611)
chr8 (14-70)||(30483904-30483960)
chr8 (4-60)||(35035297-35035353)
chr8 (4-71)||(8484998-8485065)
chr8 (16-70)||(6530807-6530861)
chr8 (17-71)||(28566104-28566158)
chr8 (17-71)||(28573727-28573781)
chr8 (1-71)||(35641908-35641978)
chr8 (1-71)||(44780121-44780191)
chr8 (18-71)||(5801046-5801099)
chr8 (1-70)||(8059632-8059701)
chr8 (17-70)||(14254727-14254780)
chr8 (37-70)||(18540298-18540331)
chr8 (37-70)||(23874425-23874458)
chr8 (1-70)||(26688865-26688934)
chr8 (1-70)||(29431011-29431080)
chr8 (37-73)||(12988425-12988461)
chr8 (1-69)||(29858056-29858124)
chr8 (14-70)||(32157191-32157247)
chr8 (14-70)||(35287716-35287772)
[»] chr7 (45 HSPs)
chr7 (1-71)||(45709715-45709785)
chr7 (1-70)||(24513797-24513866)
chr7 (1-70)||(48771938-48772007)
chr7 (1-65)||(41519271-41519335)
chr7 (14-69)||(22927477-22927532)
chr7 (4-70)||(23301612-23301678)
chr7 (1-70)||(15137553-15137622)
chr7 (1-70)||(18363696-18363765)
chr7 (14-71)||(23552117-23552174)
chr7 (14-71)||(23595728-23595785)
chr7 (1-70)||(26199509-26199578)
chr7 (1-70)||(26459417-26459486)
chr7 (14-70)||(25021355-25021411)
chr7 (1-73)||(43663102-43663174)
chr7 (31-74)||(24107298-24107341)
chr7 (1-72)||(43215182-43215253)
chr7 (1-70)||(18011356-18011426)
chr7 (13-67)||(45976942-45976996)
chr7 (14-75)||(5273610-5273671)
chr7 (1-70)||(22760863-22760932)
chr7 (5-70)||(25590611-25590676)
chr7 (1-69)||(2495843-2495911)
chr7 (31-71)||(35119382-35119422)
chr7 (14-70)||(42836021-42836077)
chr7 (16-70)||(7801180-7801234)
chr7 (1-71)||(17041019-17041089)
chr7 (1-71)||(23945860-23945930)
chr7 (14-72)||(25655248-25655306)
chr7 (16-70)||(25956314-25956368)
chr7 (1-71)||(30579334-30579404)
chr7 (17-75)||(33869468-33869526)
chr7 (16-70)||(39499741-39499795)
chr7 (37-75)||(39631839-39631877)
chr7 (38-67)||(4566472-4566501)
chr7 (1-70)||(20335838-20335907)
chr7 (14-47)||(24418161-24418194)
chr7 (4-69)||(35513467-35513532)
chr7 (14-71)||(38374619-38374676)
chr7 (23-64)||(42477097-42477138)
chr7 (37-70)||(45559200-45559233)
chr7 (4-64)||(21877814-21877874)
chr7 (14-74)||(26526286-26526346)
chr7 (14-70)||(30442488-30442544)
chr7 (11-71)||(38917094-38917153)
chr7 (44-72)||(48256542-48256570)
[»] chr5 (25 HSPs)
chr5 (4-70)||(29075781-29075847)
chr5 (16-71)||(26598523-26598578)
chr5 (1-71)||(30109315-30109385)
chr5 (3-70)||(43230783-43230852)
chr5 (1-71)||(43241689-43241759)
chr5 (1-70)||(19949623-19949691)
chr5 (13-70)||(21549156-21549213)
chr5 (34-70)||(3252329-3252365)
chr5 (11-75)||(22020879-22020943)
chr5 (3-70)||(14495814-14495881)
chr5 (1-71)||(87430-87500)
chr5 (14-72)||(30735090-30735148)
chr5 (1-70)||(892481-892550)
chr5 (1-70)||(16773807-16773876)
chr5 (14-71)||(30883218-30883275)
chr5 (37-70)||(7918512-7918545)
chr5 (14-71)||(16436617-16436673)
chr5 (14-67)||(18437088-18437141)
chr5 (37-70)||(19043458-19043491)
chr5 (37-70)||(25627057-25627090)
chr5 (42-71)||(26078099-26078128)
chr5 (14-71)||(34984805-34984862)
chr5 (3-63)||(1410668-1410728)
chr5 (14-70)||(16457810-16457866)
chr5 (14-70)||(41797832-41797888)
[»] chr6 (17 HSPs)
chr6 (14-71)||(12188323-12188380)
chr6 (1-72)||(33549102-33549173)
chr6 (15-64)||(34444809-34444858)
chr6 (14-70)||(24641210-24641266)
chr6 (4-68)||(32613150-32613214)
chr6 (1-71)||(10338181-10338251)
chr6 (1-71)||(12234514-12234584)
chr6 (1-71)||(31622998-31623068)
chr6 (16-70)||(34877095-34877149)
chr6 (38-71)||(13330086-13330119)
chr6 (1-70)||(30127400-30127469)
chr6 (13-70)||(32201904-32201961)
chr6 (15-63)||(3968215-3968263)
chr6 (31-71)||(6663150-6663190)
chr6 (14-66)||(6776627-6776679)
chr6 (14-70)||(13227178-13227234)
chr6 (13-49)||(31886275-31886311)
[»] scaffold0211 (1 HSPs)
scaffold0211 (16-70)||(24053-24107)
[»] scaffold0258 (1 HSPs)
scaffold0258 (1-70)||(15330-15399)
[»] scaffold0070 (1 HSPs)
scaffold0070 (14-70)||(42540-42596)
[»] scaffold0299 (1 HSPs)
scaffold0299 (1-64)||(11534-11597)
[»] scaffold0517 (1 HSPs)
scaffold0517 (4-70)||(7736-7802)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-67)||(94978-95044)
[»] scaffold0194 (1 HSPs)
scaffold0194 (1-66)||(13053-13118)
[»] scaffold0187 (2 HSPs)
scaffold0187 (14-70)||(12442-12498)
scaffold0187 (14-70)||(22770-22826)


Alignment Details
Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 3001448 - 3001271
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttatacattaattttatcaaacacaattat 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  3001448 acctgagatctcaaggaggagcacactcctagatctcaagtcaataccactaggccaacccaagtgagttttaaacattaattttatcaaacacaattat 3001349  T
Q  101 ttcatctactatcaactatatcttataaactaannnnnnnnnnnnnaaagaatatcttataaactatatgtgatcagttagt 182  Q
    |||||||||||||||||||||||||||||||||             ||||||||||||||||||||||||||||||||||||    
T  3001348 ttcatctactatcaactatatcttataaactaa----ttttcttttaaagaatatcttataaactatatgtgatcagttagt 3001271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34041595 - 34041665
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  34041595 acctgagaccttgaggaggagcacactctcagatcctaagtcaataccactaggccaacccaagtgggttt 34041665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 35916153 - 35916086
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||  ||||||| |||||||||| |||||||||||||||||| || ||||||||||||||||    
T  35916153 ctgagatcttgaggaggaacacactcttaaatctcaagtcaataccaccagaccaacccaagtgggtt 35916086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 4438999 - 4439055
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||    
T  4438999 aggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4060221 - 4060291
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||  ||||| |||||||||| || | ||||  ||||||||||||||||||||||||||||||    
T  4060221 acctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactaggccaacccaagtgggttt 4060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37480144 - 37480074
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||| || || |||| ||||||||| ||||||||||||||||||||    
T  37480144 acctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39715061 - 39714991
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| |||||||||||||||  || || |||||||||||||| | ||||||||||||||||||    
T  39715061 acctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggttt 39714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 5147702 - 5147755
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||| ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  5147702 aggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggtt 5147755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 40416397 - 40416466
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| || ||||||||||| ||||  || |  ||||||||||||||||||||||||||||||||||    
T  40416397 acctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtt 40416466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42327402 - 42327471
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  42327402 acctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 16381674 - 16381730
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||||    
T  16381674 aggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggtt 16381730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 7799044 - 7799115
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttat 74  Q
    |||||||||| |||||||||||||||  |  || |||| ||||||||| ||| |||||||||||||||||||    
T  7799044 ctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggttttat 7799115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 16918598 - 16918653
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    |||||||||||||||  ||||| |||  ||||||||||||||||||||||||||||    
T  16918598 aggaggagcacactcccagatcccaaaccaataccactaggccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 19244164 - 19244109
Alignment:
Q  15 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||||| || || ||||||||||||| ||| ||||||||||||||||    
T  19244164 ggaggagcacactctcaggtcccaagtcaataccagtagaccaacccaagtgggtt 19244109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 14500333 - 14500275
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||||||||||  ||||||||||   ||||||||||||||| |||||||||||||    
T  14500333 aggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtttt 14500275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 24191904 - 24191842
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    |||||||||||||||||||||||||| || || |||| ||||||||  |||||||| ||||||    
T  24191904 tgagatctcaaggaggagcacactctcaggtcccaagccaataccatcaggccaactcaagtg 24191842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29503340 - 29503270
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||  || || |||  ||||||||||||||||||||||||||||||    
T  29503340 acctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 42602607 - 42602553
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||  || || |||| ||||||||||||||||||||||||||||||    
T  42602607 aggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 11738064 - 11738121
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||| |||||||| ||||||| ||||||||||||||  ||||| |||||||||||    
T  11738064 aggaggaacacactctcagatctctagtcaataccactaatccaactcaagtgggttt 11738121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18259799 - 18259730
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||| | |||||||| ||||||||| |||||||| ||| ||||||    
T  18259799 acctgagacctataggaggagcacactctcaaatctcaagccaataccaccaggccaactcaaatgggtt 18259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 29197393 - 29197453
Alignment:
Q  11 tcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||||||||  |  || |||||||||||||| | ||||||||||||||||||    
T  29197393 tcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggttt 29197453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 42922470 - 42922414
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  || |  |||| |||||||||||||||||||||||||||||    
T  42922470 aggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 12994386 - 12994452
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| || ||||||||||||||||  || || ||||||||||||||||| ||||| |||| |||||    
T  12994386 tgagaccttaaggaggagcacactcccaggtcccaagtcaataccactagaccaactcaagcgggtt 12994452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 42860414 - 42860348
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| ||| |||||||||||||||  || ||||||||||||| ||| |||||||| ||||| ||||    
T  42860414 tgagacctcgaggaggagcacactcccaggtctcaagtcaatatcaccaggccaactcaagtaggtt 42860348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 1729872 - 1729815
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  |  || |||| |||||||||||| |||||||||||||||||    
T  1729872 aggaggagcacactcccaagtcccaagccaataccactagcccaacccaagtgggttt 1729815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28846760 - 28846691
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||  || |||||||||||||||  || || |||||||||||||||||  ||||| |||||||||    
T  28846760 acctgagacatcgaggaggagcacactcccaggtcccaagtcaataccactagatcaacctaagtgggtt 28846691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 1435120 - 1435064
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| ||||||||| || ||| |||| || |||||||| |||||||||||||||||    
T  1435120 aggagaagcacactcctaaatcccaagccagtaccactatgccaacccaagtgggtt 1435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 9318122 - 9318150
Alignment:
Q  42 caataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||||||||||||||||    
T  9318122 caataccactaggccaacccaagtgggtt 9318150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 32106618 - 32106566
Alignment:
Q  18 ggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||  || || |||||||| ||||| |||||||||||||||||||    
T  32106618 ggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtt 32106566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 36042385 - 36042345
Alignment:
Q  31 agatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  |||||||||||| |||||||||||    
T  36042385 agatctcaagtcaatgtcactaggccaactcaagtgggttt 36042345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 6e-21; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 5499426 - 5499485
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5499426 aaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtttt 5499485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 47454624 - 47454692
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    |||||||| ||| |||||||||||||||  |||||||||| ||||||||||||  ||||||||||||||    
T  47454624 acctgagacctcgaggaggagcacactccaagatctcaagccaataccactagaacaacccaagtgggt 47454692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 10499116 - 10499187
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||| |||||||| ||||| ||||  ||||| |||| ||||||||| |||||||||||||||||||||    
T  10499116 acctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtttt 10499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 26989051 - 26988994
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||||| ||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  26989051 aggaggagcaaactctcagatc-caagccaataccactaggccaacccaagtgggtttt 26988994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 2597227 - 2597296
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||||||||||||||||||| || |||  ||| ||||||||| || ||||||||||||||||    
T  2597227 acctgagacctcaaggaggagcacactcctaaatccgaagccaataccaccagaccaacccaagtgggtt 2597296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 28928899 - 28928952
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||| ||||||||    
T  28928899 aggaggagcacactctcagatcccaagccaataccactaggccaatccaagtgg 28928952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37788472 - 37788541
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  ||||||||||||||| ||| |  ||||||||||||||| ||||||||||||||||||    
T  37788472 acctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 46518684 - 46518627
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  ||||| |||| ||||||||||| ||||||||||||||||||    
T  46518684 aggaggagcacactcccagatcccaagccaataccactatgccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 4222197 - 4222141
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  ||||| |||| ||||||||||| |||||||||||||||||    
T  4222197 aggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 31788990 - 31789046
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  ||||| |||| ||||| |||||||||||||||||||||||    
T  31788990 aggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31520612 - 31520683
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||| ||| ||| |||||||||||||||  ||||| |||| |||| |||| |||||||||||||||||||||    
T  31520612 acctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtttt 31520683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 32 - 70
Target Start/End: Complemental strand, 203128 - 203090
Alignment:
Q  32 gatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  203128 gatcccaagtcaataccactaggccaacccaagtgggtt 203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9557389 - 9557319
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||| |||||||||||||||| ||||| |||| |||||| |  |||||| | |||||||||||    
T  9557389 acctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggttt 9557319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19154700 - 19154630
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||| ||  |||||| |||||| ||||||||||||||| |||||||    
T  19154700 acctgagacctttaggaggagcacactctcaggcctcaagccaatacaactaggccaacccaaatgggttt 19154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30311375 - 30311305
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||  ||||| |||| | ||||||||||||||||||| ||||||||    
T  30311375 acctgagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 4844519 - 4844580
Alignment:
Q  2 cctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||| ||| |||||||||||||||  ||||| |||||||||||||| || |||||||||    
T  4844519 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4844580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 4870215 - 4870276
Alignment:
Q  2 cctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||| ||| |||||||||||||||  ||||| |||||||||||||| || |||||||||    
T  4870215 cctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaa 4870276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14186716 - 14186648
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  14186716 acctgagaccttgaggaggagcacactcc-aggtcccaagacaataccactaggccaacccaagtgggtt 14186648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49494153 - 49494218
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    |||||||| ||| |||| ||||||||||  | || |||||||||||||||||||| ||||||||||    
T  49494153 acctgagacctcgaggaagagcacactcccaaatttcaagtcaataccactaggctaacccaagtg 49494218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 16354912 - 16354968
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  || |  |||| |||||||||||||||||||||||||||||    
T  16354912 aggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 27093404 - 27093439
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||| |||||||||||||||||||||||||||||||    
T  27093404 caagccaataccactaggccaacccaagtgggtttt 27093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 2667931 - 2667869
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    |||||||| ||| |||| ||||||||||  ||||| |||| ||||||||| ||||||||||||    
T  2667931 acctgagacctcgaggaagagcacactcccagatcccaagccaataccaccaggccaacccaa 2667869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 7975474 - 7975416
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||||||||||  ||||| |||| | ||||||||||||||||| || ||||||||    
T  7975474 aggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtttt 7975416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8368806 - 8368876
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| |||| |||||||||   || | |||||||||||||||||||||||| ||| |||||||    
T  8368806 acctgagacctcgaggatgagcacactaccaggtttcaagtcaataccactaggccaactcaattgggttt 8368876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 10445146 - 10445216
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaata-ccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||  || || |||| ||||  ||||||||||||||||||||||||    
T  10445146 acctgagacctcgaggaggagcacactcccaggtcccaagccaattgccactaggccaacccaagtgggtt 10445216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 35111246 - 35111180
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| ||| |||| ||||||||||  || |||||| ||||| |||||||||||| |||||||||||    
T  35111246 tgagacctcgaggatgagcacactcccaggtctcaaatcaatgccactaggccaatccaagtgggtt 35111180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36720450 - 36720380
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||| | ||| |||||||||||||||  | ||| |||| ||||||||| || |||||||||||||||||    
T  36720450 acctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggttt 36720380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 40063685 - 40063619
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| || ||||||||||| ||||| ||||| |||| |||||| |||| | |||||||||||||||    
T  40063685 tgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggtt 40063619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 42430388 - 42430335
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||  ||||| |||||||||||||| | |||||||||||||||||    
T  42430388 gaggagcacactccaagatcccaagtcaataccacca-gccaacccaagtgggtt 42430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 11612368 - 11612307
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaaccca 62  Q
    |||||||| || ||||||||||||||||  || || ||||| |||||||| |||||||||||    
T  11612368 acctgagaccttaaggaggagcacactcccagctcccaagtgaataccaccaggccaaccca 11612307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12761581 - 12761520
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaaccca 62  Q
    |||||||| ||||||||||| |||||||  || || |||||||||||||| || ||||||||    
T  12761581 acctgagagctcaaggaggaacacactcccaggtcccaagtcaataccaccagaccaaccca 12761520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 36797746 - 36797685
Alignment:
Q  11 tcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    ||||||||||||||||||| | || ||||||||||| ||  || |||||||||||| |||||    
T  36797746 tcaaggaggagcacactctcatatttcaagtcaatatcatcagaccaacccaagtgagtttt 36797685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 53473425 - 53473368
Alignment:
Q  10 ctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||||||| | | || ||||||||||||||||||||| ||| ||| ||||||||    
T  53473425 ctcaaggaggagtaaaatcctagatctcaagtcaataccaccaggacaaaccaagtgg 53473368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 70
Target Start/End: Original strand, 8796140 - 8796168
Alignment:
Q  42 caataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||||||||||||||||    
T  8796140 caataccactaggccaacccaagtgggtt 8796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 19341857 - 19341801
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  |  ||||||||| ||||||||||| |||||||| ||||||    
T  19341857 aggaggagcacactcccaagtctcaagtctataccactagggcaacccaaatgggtt 19341801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 32651447 - 32651503
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaac 59  Q
    |||||||||  |||||||||||||||  || || |||| ||||||||||||||||||    
T  32651447 ctgagatcttgaggaggagcacactcccaggtcccaagccaataccactaggccaac 32651503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 71
Target Start/End: Original strand, 34622567 - 34622599
Alignment:
Q  39 agtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||||| |||||||||||||||||    
T  34622567 agtcaataccactagaccaacccaagtgggttt 34622599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41640 - 41709
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  41640 acctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51814563 - 51814491
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 73  Q
    |||||||| ||  |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  51814563 acctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtttta 51814491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25297841 - 25297770
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||| ||| ||| |||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||    
T  25297841 acctcagacctcgaggaggagcacactctcagatcctaagtcaataccactagaccaacccaagtgggtttt 25297770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19528334 - 19528403
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  ||||||||||||||| |||||| |||| ||||||||| |||||||||||||||||||    
T  19528334 acctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 24730438 - 24730387
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  24730438 gaggagcacactcccagatctcaagacaataccactaggccaacccaagtgg 24730387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 40257465 - 40257398
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||| ||| |||||||||||||||  || ||||||| ||||||||| ||||||||||||||||||||    
T  40257465 tgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 26232402 - 26232464
Alignment:
Q  10 ctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||| ||||||||||||  |||||||||| |||||||||||| ||||||||||||| ||||    
T  26232402 ctcaagcaggagcacactcccagatctcaagccaataccactagaccaacccaagtggatttt 26232464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 38978968 - 38979018
Alignment:
Q  20 agcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  38978968 agcacactcctaggtctcaagtcaataccactaggccaacccaaatgggtt 38979018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 52336781 - 52336839
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaac 59  Q
    ||||||||||| ||||||||||||||||  ||||| |||| ||||||||||||||||||    
T  52336781 acctgagatcttaaggaggagcacactcccagatcccaagccaataccactaggccaac 52336839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 8904470 - 8904413
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  | ||| ||||||||||| |||||||||||||||||||||||    
T  8904470 aggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggttt 8904413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 29817729 - 29817672
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 73  Q
    |||||||||||||| || ||||||||||||| ||| ||||||||||||||| ||||||    
T  29817729 gaggagcacactctcaggtctcaagtcaatatcaccaggccaacccaagtgagtttta 29817672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 34460929 - 34460986
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||| |||||| |||| ||||||||||||||||||| |||||| |||||||||||    
T  34460929 aggaggaacacacttttaggtctcaagtcaataccactaagccaactcaagtgggttt 34460986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 9165215 - 9165271
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  9165215 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33700780 - 33700847
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 68  Q
    |||||||| ||  |||||||||||||||  ||||  |||| |||||||||||||||||||||||||||    
T  33700780 acctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 17745266 - 17745328
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    ||||| ||| ||||||||||||| || || || |||| |||||||||||||||||||||||||    
T  17745266 tgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtg 17745328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2799931 - 2799862
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  |||||||||| | ||||||||||||||| | |||||||||    
T  2799931 acctgagaccttgaggaggagcacactcccagatctcaagcctataccactaggccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 8177202 - 8177259
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  ||||| |||| |||||||||||||||||| ||| |||||||    
T  8177202 aggaggagcacactcccagatcccaagccaataccactaggccaactcaaatgggttt 8177259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 9224844 - 9224779
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    |||||||| ||||||||| |||| ||||| |||||||||  ||||||||| || ||||||||||||    
T  9224844 acctgagacctcaaggagaagcatactctcagatctcaaagcaataccaccagaccaacccaagtg 9224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 36371526 - 36371469
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || |  |||| ||||||||||||||||||||||||||||||    
T  36371526 aggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 42983390 - 42983443
Alignment:
Q  10 ctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||||||| |||||||  |||||||||||||||||||| | ||||||||||    
T  42983390 ctcaaggaggaccacactcccagatctcaagtcaataccaccatgccaacccaa 42983443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 31794284 - 31794340
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  |  || |||| |||||||||||||||||||||||||||||    
T  31794284 aggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 44961821 - 44961765
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||||| ||||||||  ||||||||  | ||||||||||||||||    
T  44961821 aggaggagcacactcttaaatctcaagctaataccacctgaccaacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 11068852 - 11068919
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| |||||| ||||||||||||| | |||| |||||||||||||| ||  |||||||| ||||||    
T  11068852 ctgaggtctcaaagaggagcacactcctggatcccaagtcaataccaccagatcaacccaaatgggtt 11068919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 17410297 - 17410238
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||||| ||||||| |||||||  ||||| |||  ||||||||||||||||||||||    
T  17410297 tgagatctcgaggaggaccacactcccagatcccaaaccaataccactaggccaacccaa 17410238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 73
Target Start/End: Complemental strand, 41508887 - 41508828
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 73  Q
    |||||||||||||||  ||||| |||  || |||||| ||||||||||||||||||||||    
T  41508887 aggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtttta 41508828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 15786327 - 15786393
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||| ||  |||||||||||||||  ||||| |||| |||||| ||||| |||||||||||||    
T  15786327 acctgagaccttgaggaggagcacactcccagatcccaagccaatactactagaccaacccaagtgg 15786393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 28411397 - 28411343
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggcca 57  Q
    |||||| ||||| |||||||||||||| | ||| |||||||||||||| ||||||    
T  28411397 ctgagacctcaaagaggagcacactctcatatcccaagtcaataccaccaggcca 28411343  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 36124899 - 36124853
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccac 50  Q
    ||||| |||||||||||||||||||| || || ||||||||||||||    
T  36124899 tgagacctcaaggaggagcacactctcaggtcccaagtcaataccac 36124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 37400340 - 37400274
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| || ||||||||||||||| | || ||||||| ||||||||| || ||||||||||| ||||    
T  37400340 tgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 37400274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 44126450 - 44126396
Alignment:
Q  15 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    ||||||||||||||  || || || ||||||||||| ||||||||||||||||||    
T  44126450 ggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 2074057 - 2074001
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||| || ||||| ||||||||||| || |||||||||||| |||||||    
T  2074057 aggaggagcacacgct-agatcccaagtcaatacaaccaggccaacccaaatgggttt 2074001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 4566604 - 4566547
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || |  |||| ||||| ||||||||||||||||||||||||    
T  4566604 aggaggagcacactcccaggttccaagccaatatcactaggccaacccaagtgggttt 4566547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16893463 - 16893394
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||| ||||||  | |||||||| ||||||||  ||| |||||||||||||||    
T  16893463 acctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggtt 16893394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30420379 - 30420310
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||| |  ||||||||||||||| || ||| |||| ||| |||||| |||||||| |||||||||    
T  30420379 acctgagatgttgaggaggagcacactcctatatcccaagccaaaaccacttggccaacctaagtgggtt 30420310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 47720886 - 47720837
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||||||||||| || |||||||||||||||||| ||  ||||||||    
T  47720886 aggaggagcacactcctatatctcaagtcaataccaccagatcaacccaa 47720837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 47727878 - 47727829
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||||||||||| || |||||||||||||||||| ||  ||||||||    
T  47727878 aggaggagcacactcctatatctcaagtcaataccaccagatcaacccaa 47727829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 11438504 - 11438560
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||| |||||||||| ||| |||||||||||||  || ||||| ||||||||||    
T  11438504 aggaggatcacactcttaaatcgcaagtcaataccatcagaccaactcaagtgggtt 11438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 12259316 - 12259260
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  | ||| ||||| |||| ||||| |||||||||||||||||    
T  12259316 aggaggagcacactcccaaatcccaagttaatatcactatgccaacccaagtgggtt 12259260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 14787364 - 14787408
Alignment:
Q  22 cacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    |||||||| || ||||||||||||||||||||| |||| ||||||    
T  14787364 cacactctcaggtctcaagtcaataccactaggtcaactcaagtg 14787408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 16169998 - 16170054
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||| |||||||  || || |||||||||||||| |||| ||||||||||||||    
T  16169998 aggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 19088265 - 19088213
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    |||||||| ||| ||| | |||||| | |||||||||||||||||||||||||    
T  19088265 aggaggagtacaatctcaaatctcaggccaataccactaggccaacccaagtg 19088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 51703835 - 51703779
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  ||||  |||| |||||||||||| ||||||||| ||||||    
T  51703835 aggaggagcacactcccagattccaagccaataccactagaccaacccaaatgggtt 51703779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 46545778 - 46545711
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||  |||||||||||||||| || ||||||| |||||||||||||||||||||||||||||    
T  46545778 ctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtt 46545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47044786 - 47044717
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||| ||||| ||||| |||||||||||||| ||||||| |||||||||||    
T  47044786 acctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtt 47044717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37109358 - 37109427
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  37109358 acctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 51948549 - 51948480
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||| |||||||| |||||| ||||||||||| || ||| |||||||||||||||    
T  51948549 acctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21660154 - 21660221
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||| ||| |||| ||||||||||  |||||||||||||||||||| || ||||||||||| |||||    
T  21660154 tgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21660221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 21668918 - 21668985
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||| ||| |||| ||||||||||  |||||||||||||||||||| || ||||||||||| |||||    
T  21668918 tgagacctcgaggaagagcacactcccagatctcaagtcaataccaccagaccaacccaagttggttt 21668985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 51250532 - 51250599
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||  ||| |||||||||||  ||||| |||| ||||||||| ||||||||||||||||||||    
T  51250532 tgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggttt 51250599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 1730511 - 1730565
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||| || || |||| ||||||||||||| |||||||||||||||    
T  1730511 gaggagcacactctcaggtcccaagccaataccactaggtcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 13901808 - 13901746
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    ||||| ||||||||||| |||||||  || ||||||| |||||||||||| ||||||||||||    
T  13901808 tgagacctcaaggaggaacacactcccaggtctcaagccaataccactagaccaacccaagtg 13901746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 71
Target Start/End: Original strand, 27965537 - 27965587
Alignment:
Q  21 gcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||  ||||| |||| ||||||||||||||||||||||||||||||    
T  27965537 gcacactcccagatcccaagccaataccactaggccaacccaagtgggttt 27965587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 28635765 - 28635696
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| ||| ||| |||||||||||||||  ||||| ||||||| |||||| ||| |||||||||||||||    
T  28635765 acctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtt 28635696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 43623451 - 43623516
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    ||||||||  ||||||||||||||||||   ||||||||||||||| |||||| | ||||||||||    
T  43623451 acctgagacttcaaggaggagcacactccctgatctcaagtcaatatcactagactaacccaagtg 43623516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 9936981 - 9937037
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  |  ||||||||| |||||||||||||||||||||| ||||    
T  9936981 aggaggagcacactcccaagtctcaagtcgataccactaggccaacccaagtaggtt 9937037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 12798753 - 12798681
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 73  Q
    |||||| | ||| ||||| |||||||||  |||||||||  |||||||||| || ||||||||||||||||||    
T  12798753 acctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtttta 12798681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 25869597 - 25869632
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaatacca 49  Q
    |||||||||||||||| |||||||||||||||||||    
T  25869597 aggaggagcacactctcagatctcaagtcaatacca 25869632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7949461 - 7949531
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||  || || |||| ||||||| |||||||| |||||||||||||    
T  7949461 acctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctaggccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 9241048 - 9241106
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 75  Q
    |||||||||||   ||||| |||| ||||||||| ||||||||||||||||||| ||||    
T  9241048 aggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttatata 9241106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 37443756 - 37443702
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||| ||||||  ||||| |||| ||||||||||||| |||||||||||||||    
T  37443756 gaggagtacactcccagatcccaagccaataccactaggtcaacccaagtgggtt 37443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52254411 - 52254477
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||| | |||||||||||||||||||| | ||| |||||||||||||  || ||||| |||||||    
T  52254411 acctgaaacctcaaggaggagcacactctcatatcccaagtcaataccatcagaccaactcaagtgg 52254477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 19238588 - 19238653
Alignment:
Q  5 gagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| ||| |||||||||||||||  |  || |||| ||||||||| |||||||||||||||||||    
T  19238588 gagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtt 19238653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39509139 - 39509070
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||  ||||| |||| || |||||  || ||||||||||||||||    
T  39509139 acctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 45061011 - 45060978
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||||| |||||||||||||||    
T  45061011 caagtcaataccactaggtcaacccaagtgggtt 45060978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 55427207 - 55427276
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| || ||||||| ||||  || || |||| ||||||||| |||||||||||||||||||    
T  55427207 acctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 29195149 - 29195093
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||||||||  || || |||| ||| ||||| |||||||||||||||||||||    
T  29195149 gaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtttt 29195093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 31826665 - 31826609
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  | ||| |||| | ||||||||||| |||||||||||||||    
T  31826665 aggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 51346483 - 51346531
Alignment:
Q  19 gagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    ||||||||||| | ||||||||||||||||   ||||||||||||||||    
T  51346483 gagcacactctcaaatctcaagtcaataccgtcaggccaacccaagtgg 51346531  T

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Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3826784 - 3826854
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||  ||||||||||||||| | ||  |||| ||||||||||||||||||||||||||||||    
T  3826784 acctgagatctcgtggaggagcacactctcaaatggcaagccaataccactaggccaacccaagtgggttt 3826854  T

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Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16852409 - 16852339
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| |||||||||||||||  || || |||| ||||||||||||||||||||||||||||||    
T  16852409 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 16852339  T

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Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19703494 - 19703564
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||| || || |||| ||||||||||||||||||||||||||||||    
T  19703494 acctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 15 - 70
Target Start/End: Original strand, 20994479 - 20994534
Alignment:
Q  15 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||||  || || ||||||||||||||||||||||||||||||||||    
T  20994479 ggaggagcacactcccaggtcccaagtcaataccactaggccaacccaagtgggtt 20994534  T

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Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 17727448 - 17727504
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||||||||| || ||||||||||| ||||| || ||||||||||||||||||    
T  17727448 gaggagcacactctgaggtctcaagtcaacaccacgagaccaacccaagtgggtttt 17727504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 2203548 - 2203494
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 68  Q
    |||||||||||||||  || || |||| |||||||||||||||||||||||||||    
T  2203548 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 2792712 - 2792646
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||||||  ||||||| || ||||| |||||||||||||| |||| ||||||||| |||||||    
T  2792712 acctgagatctagaggaggaacatactctcagatctcaagtcaaaaccattaggccaactcaagtgg 2792646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 4830556 - 4830486
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| ||||||| |||||||| ||||| |||   |||||||| ||||||||||||||||||||    
T  4830556 acctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 968431 - 968362
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||  || || |||| ||||||||| |||||||| ||||||||||    
T  968431 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

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Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 6569790 - 6569847
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||||||  ||||| |||| ||||| ||||||||||||| |||||||||    
T  6569790 aaggaggagcacactcccagatcccaagccaatatcactaggccaacctaagtgggtt 6569847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 18897222 - 18897165
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||| || || |||  ||| ||||||||||||||||||||||||||    
T  18897222 aggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggttt 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23361656 - 23361725
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  | ||| |||||||||||||| ||| |||||||||||||||    
T  23361656 acctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggtt 23361725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 28783116 - 28783059
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || ||||||| ||||||||| | ||||||||||||||||||    
T  28783116 aggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggttt 28783059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 35826368 - 35826311
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||||||  || ||||||| || ||||||||||||||||||| ||||||    
T  35826368 aaggaggagcacactcacaggtctcaagccactaccactaggccaacccaattgggtt 35826311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 3624634 - 3624582
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 68  Q
    |||||||||||||  || || |||| |||||||||||||||||||||||||||    
T  3624634 gaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 5264611 - 5264543
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||| ||| |||||||||||| ||  || |  |||| ||||||||||||||||||||||||||||||    
T  5264611 ctgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggttt 5264543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 30483904 - 30483960
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  | ||| |||| |||||||||| ||||||||||||||||||    
T  30483904 aggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 35035353 - 35035297
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacc 60  Q
    ||||| ||||| |||||||||||| |||||||||||| ||||||||  |||||||||    
T  35035353 tgagacctcaaagaggagcacacttttagatctcaagccaataccaacaggccaacc 35035297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 8485065 - 8484998
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||| ||||| |||||||||||||  || || ||||  |||||||| ||||||||||||||||||||    
T  8485065 tgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggttt 8484998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 6530861 - 6530807
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||| ||| || |||| ||| ||||| |||||||||||||||||||    
T  6530861 gaggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggtt 6530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 28566158 - 28566104
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||| || || |||  ||||||||||||| ||||||||||||||||    
T  28566158 aggagcacactctaaggtcccaaaccaataccactaggtcaacccaagtgggttt 28566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 28573781 - 28573727
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||| || || |||  ||||||||||||| ||||||||||||||||    
T  28573781 aggagcacactctaaggtcccaaaccaataccactaggtcaacccaagtgggttt 28573727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35641908 - 35641978
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||  || |||||||||||||||  | |||||||| | ||||||| || |||||||||||||||||    
T  35641908 acctgagacatcgaggaggagcacactcccaaatctcaagccgataccaccagaccaacccaagtgggttt 35641978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44780121 - 44780191
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||  |  || |||| |||| |||||||||||||||||||||||||    
T  44780121 acctgagaccttgaggaggagcacactcccaagtcccaagccaatgccactaggccaacccaagtgggttt 44780191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 5801099 - 5801046
Alignment:
Q  18 ggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||| |||||| ||||  |||||||| ||| ||||||||||||||||    
T  5801099 ggagcacactcctagatcccaagctaataccaccaggtcaacccaagtgggttt 5801046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8059701 - 8059632
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  ||||||| |||||||| | ||  |||||||||||||  |||||||||||||||||||    
T  8059701 acctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 14254780 - 14254727
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||  |||||||||  |||||| |||||| |||||||||||||||    
T  14254780 aggagcacactcccagatctcaaaccaatacaactaggtcaacccaagtgggtt 14254727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 18540331 - 18540298
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| |||||||||||||||||||||||||||||    
T  18540331 caagccaataccactaggccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 23874425 - 23874458
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| |||||||||||||||||||||||||||||    
T  23874425 caagccaataccactaggccaacccaagtgggtt 23874458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26688934 - 26688865
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  || || |||| ||| ||||| |||||||||||||||||||    
T  26688934 acctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 29431080 - 29431011
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||  |||||||||||||||||||  |  || |||| ||||||| | |||||||||||||||||||    
T  29431080 acctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccaggccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 12988461 - 12988425
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtttta 73  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  12988461 caagccaataccactaggccaatccaagtgggtttta 12988425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 29858056 - 29858124
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    |||||||| ||| |||||||||||||||   | || |||| ||||||||| ||||||| ||||||||||    
T  29858056 acctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 32157247 - 32157191
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||| ||||  || || |||||||||||||| |||||||||||| ||||||    
T  32157247 aggaggagcatactccaaggtcccaagtcaataccaccaggccaacccaaatgggtt 32157191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 35287772 - 35287716
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  | |||||||| ||| ||||| ||||| |||||||||||||    
T  35287772 aggaggagcacactccaaaatctcaagccaacaccaccaggcctacccaagtgggtt 35287716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45709715 - 45709785
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| |||||||||||||||| ||||| ||||  ||||||||||||||||||||| |||||||    
T  45709715 acctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24513866 - 24513797
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||||||||| || ||||||  | |||||||| |||||||||||||||||||||||||||||    
T  24513866 acctgagacctcaaggagaagtacactcccaaatctcaagccaataccactaggccaacccaagtgggtt 24513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 48772007 - 48771938
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| |||||||||||||||||||  ||||| |||| ||||||||| | |||||||||||||||||    
T  48772007 acctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtt 48771938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 41519271 - 41519335
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagt 65  Q
    |||||||| ||  ||||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  41519271 acctgagaccttgaggaggagcacactcctaaatcccaagtcaataccactaggccaacccaagt 41519335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 14 - 69
Target Start/End: Complemental strand, 22927532 - 22927477
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    ||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||    
T  22927532 aggagaagcacactcctagatcccaagttaataccactaggccaacccaagtgggt 22927477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 23301612 - 23301678
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| |||||||||||||||||||  |  || |||||||||||||| |||||||||||||||||||    
T  23301612 tgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 15137622 - 15137553
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  ||||||||||||||| || ||| ||||||| |||||| |||||||||||||||||||    
T  15137622 acctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtt 15137553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18363765 - 18363696
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  | |||||||| | |||||||||||||||||||||||||||    
T  18363765 acctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 23552174 - 23552117
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || || |||||||||| ||||||||||||||||||||||||    
T  23552174 aggaggagcacactcccaggtcccaagtcaatagcactaggccaacccaagtgggttt 23552117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 23595785 - 23595728
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  |||||||||||||||||||| || |||||||||||| ||||    
T  23595785 aggaggagcacactccgagatctcaagtcaataccaccagaccaacccaagtgagttt 23595728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26199578 - 26199509
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||| |||||| ||| ||| || || |||| |||||||||||||||||| ||||||||||    
T  26199578 acctgagatctcaaagaggagtacattctcaggtcccaagccaataccactaggccaactcaagtgggtt 26199509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 26459417 - 26459486
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  26459417 acctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 25021355 - 25021411
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  25021355 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 25021411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 43663102 - 43663174
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttta 73  Q
    |||||||||||| ||||||| ||| ||| ||| || |||||||||||||  |||||||||||||||| |||||    
T  43663102 acctgagatctcgaggaggaccacgctcctaggtcccaagtcaataccatcaggccaacccaagtggatttta 43663174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 74
Target Start/End: Complemental strand, 24107341 - 24107298
Alignment:
Q  31 agatctcaagtcaataccactaggccaacccaagtgggttttat 74  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  24107341 agatctcaagtcaatatcactatgccaacccaagtgggttttat 24107298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43215253 - 43215182
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||| ||  |||||||||||||||  || || |||| |||||||||||| ||||||||||||||||||    
T  43215253 acctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagaccaacccaagtgggtttt 43215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18011356 - 18011426
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaa-taccactaggccaacccaagtgggtt 70  Q
    |||||||| |||| ||||||||||||||| || ||||||| ||| ||||| ||||||||||||| ||||||    
T  18011356 acctgagacctcatggaggagcacactctcaggtctcaagccaattaccattaggccaacccaactgggtt 18011426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 45976942 - 45976996
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    ||||||||||||||||  || || |||| ||||||||||||||||||||||||||    
T  45976942 aaggaggagcacactcccaggtcacaagccaataccactaggccaacccaagtgg 45976996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 75
Target Start/End: Original strand, 5273610 - 5273671
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 75  Q
    |||||||||||||||| || || |||| ||| ||||| ||||||||||||||||||| ||||    
T  5273610 aggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggttctata 5273671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22760932 - 22760863
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||||||||||  || || |||||||||||||| || ||||||||||||||||    
T  22760932 acctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggtt 22760863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 25590676 - 25590611
Alignment:
Q  5 gagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| ||| |||||||||||||||  |||||||||| ||||||||  ||| |||||||||||||||    
T  25590676 gagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 2495843 - 2495911
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    ||||||||| | ||||||||||||||||  | ||||||||||||||  | ||||||||| |||||||||    
T  2495843 acctgagattttaaggaggagcacactcacaaatctcaagtcaatattattaggccaactcaagtgggt 2495911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 71
Target Start/End: Complemental strand, 35119422 - 35119382
Alignment:
Q  31 agatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  35119422 agatcccaagtcaataccactaggccaacccaaatgggttt 35119382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 42836021 - 42836077
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| ||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  42836021 aggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42836077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 7801234 - 7801180
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||  || || |||||||||||||| ||||||| |||||||||||    
T  7801234 gaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtt 7801180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17041019 - 17041089
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  ||||||||||||||   ||||| |||| |||| ||||||| |||||||||||||||||    
T  17041019 acctgagaccttgaggaggagcacacttccagatcccaagccaatgccactagaccaacccaagtgggttt 17041089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23945930 - 23945860
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||||| |||||||||| ||| || |   |||||||||||| |||| ||||||||||||||||    
T  23945930 acctgagacctcaatgaggagcacattctcaggttctaagtcaataccattaggtcaacccaagtgggttt 23945860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 25655248 - 25655306
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    ||||||| |||||||  ||||| ||||||||||||||||  |||||||| |||||||||    
T  25655248 aggaggatcacactcacagatcccaagtcaataccactaaaccaacccaggtgggtttt 25655306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 25956314 - 25956368
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||  || || |||| |||||||||||||||||||||| ||||||    
T  25956314 gaggagcacactccaaggtcccaagccaataccactaggccaacccaaatgggtt 25956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30579404 - 30579334
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||| | ||||||  || ||||||| ||||||||| ||||||||||||||||||||    
T  30579404 acctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 33869468 - 33869526
Alignment:
Q  17 aggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 75  Q
    |||||||||||   || ||||||| |||||| |||||||||||||||||||||| ||||    
T  33869468 aggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggttatata 33869526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 39499741 - 39499795
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| |||||||  || || |||| |||||||||||||||||||||||||||||    
T  39499741 gaggaacacactcacaggtcccaagccaataccactaggccaacccaagtgggtt 39499795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 39631877 - 39631839
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggttttata 75  Q
    |||| ||||||||||||||||||||||||||||| ||||    
T  39631877 caagccaataccactaggccaacccaagtgggttatata 39631839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 4566472 - 4566501
Alignment:
Q  38 aagtcaataccactaggccaacccaagtgg 67  Q
    ||||||||||||||||||||||||||||||    
T  4566472 aagtcaataccactaggccaacccaagtgg 4566501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 20335838 - 20335907
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||  |  || |||| ||||||| |||| ||||||||||||||||    
T  20335838 acctgagacctcgaggaggagcacactcccaagtcccaagccaatacctctagaccaacccaagtgggtt 20335907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 24418161 - 24418194
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaatac 47  Q
    ||||||||||||||||||| ||||||||||||||    
T  24418161 aggaggagcacactcttaggtctcaagtcaatac 24418194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 35513532 - 35513467
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggt 69  Q
    |||||| || |||||||||||||||| |  || ||||  ||||||||||||||||||||| |||||    
T  35513532 tgagatatcgaggaggagcacactctcaagtcccaagcaaataccactaggccaacccaaatgggt 35513467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 38374619 - 38374676
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||| || || |||| ||| ||||| | ||||||||||||||||||    
T  38374619 aggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggttt 38374676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 42477097 - 42477138
Alignment:
Q  23 acactcttagatctcaagtcaataccactaggccaacccaag 64  Q
    ||||| |||| |||||||||||||||||||| ||||||||||    
T  42477097 acacttttaggtctcaagtcaataccactagaccaacccaag 42477138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 45559233 - 45559200
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| |||||||||||||||||||||||||||||    
T  45559233 caagccaataccactaggccaacccaagtgggtt 45559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 21877874 - 21877814
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 64  Q
    ||||| || |||||||||||| |||  || || ||||||||||||||||||||||| ||||    
T  21877874 tgagaccttaaggaggagcaccctcccaggtcccaagtcaataccactaggccaactcaag 21877814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 26526346 - 26526286
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttat 74  Q
    |||||||||||||||| | |||  ||||||||||||| || |||| |||| ||||||||||    
T  26526346 aggaggagcacactctcaaatcctaagtcaataccaccagaccaatccaaatgggttttat 26526286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 30442544 - 30442488
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||| ||||  || || |||| |||||||||| ||||||||||||||||||    
T  30442544 aggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 38917153 - 38917094
Alignment:
Q  11 tcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| |||||| ||| || |||||||| ||||||||||| ||||| |||||||||||    
T  38917153 tcaaggagaagcacattctaag-tctcaagttaataccactagaccaactcaagtgggttt 38917094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 72
Target Start/End: Original strand, 48256542 - 48256570
Alignment:
Q  44 ataccactaggccaacccaagtgggtttt 72  Q
    |||||||||||||||||||||||||||||    
T  48256542 ataccactaggccaacccaagtgggtttt 48256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 29075847 - 29075781
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||| |||||||||||||||  ||||| |||| |||||||||||||| ||||||||||||||    
T  29075847 tgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 71
Target Start/End: Complemental strand, 26598578 - 26598523
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||| ||||| |||| ||||||||||||||||| ||||||||||||    
T  26598578 gaggagcacactctcagatcccaagccaataccactaggccaatccaagtgggttt 26598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30109315 - 30109385
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| |||||||||||||||||||  || || |||| ||||||||| | ||||||||||||||||||    
T  30109315 acctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggttt 30109385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 43230783 - 43230852
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaata--ccactaggccaacccaagtgggtt 70  Q
    ||||||||| ||||||||||||||||| ||| | |||| |||||  ||||||||||||||||||||||||    
T  43230783 ctgagatcttaaggaggagcacactctcagaacccaagccaatataccactaggccaacccaagtgggtt 43230852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 43241689 - 43241759
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| |||||||| | ||||||||  ||||| ||||||||||||||||| |||||||||||| ||||    
T  43241689 acctgagacctcaaggaagggcacactccaagatcccaagtcaataccactagaccaacccaagtgagttt 43241759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19949623 - 19949691
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||| | | |||||||||| ||||    
T  19949623 acctgagagctcgaggaggagcacactct-agatctcaagtcaataccaccaagtcaacccaagtaggtt 19949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 21549156 - 21549213
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||||||  || || |||| |||||||||||||||||||||||||||||    
T  21549156 aaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 3252329 - 3252365
Alignment:
Q  34 tctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||||||||||||||||||||||||    
T  3252329 tctcaagtcaataccactaggccaacccaagtgggtt 3252365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 22020879 - 22020943
Alignment:
Q  11 tcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttttata 75  Q
    ||||||||||||||||||  ||||| ||||  |||||||||| ||||||||||| ||||||||||    
T  22020879 tcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaagagggttttata 22020943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 14495814 - 14495881
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||| ||| |||||||||||||||  ||||| |||||||||||||| || ||||||||| ||||||    
T  14495814 ctgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggtt 14495881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 87430 - 87500
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  |||||||||||||||  ||||  |||| ||||||||||||||||||| ||||||||||    
T  87430 acctgagaccttgaggaggagcacactcccagattccaaggcaataccactaggccaaccgaagtgggttt 87500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 30735090 - 30735148
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||||||||||| || |  ||||||||||| |||||| |||||||||||||||||    
T  30735090 aggaggagcacactctcaggttacaagtcaatacgactaggtcaacccaagtgggtttt 30735148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 892481 - 892550
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||  |||||||| ||||||| || || |||| |||||||||||||||||||||| ||||||    
T  892481 acctgagaccttgaggaggagtacactctgaggtcccaagccaataccactaggccaacccaaatgggtt 892550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16773876 - 16773807
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||  || || |||||||||||||| || ||||| ||||||||||    
T  16773876 acctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccagaccaactcaagtgggtt 16773807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 30883218 - 30883275
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || || |||| |||||||||||| |||||||||||||||||    
T  30883218 aggaggagcacactcccaggtcccaagccaataccactagaccaacccaagtgggttt 30883275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 7918512 - 7918545
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| |||||||||||||||||||||||||||||    
T  7918512 caagccaataccactaggccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 16436673 - 16436617
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || || |||| ||||||||||||||||||||||||| ||||    
T  16436673 aggaggagcacactccaag-tcccaagccaataccactaggccaacccaagtgagttt 16436617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 18437141 - 18437088
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||||||||||| |  || ||||| |||||||||||||||||| ||||||    
T  18437141 aggaggagcacactctcaagtcccaagttaataccactaggccaacctaagtgg 18437088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 19043491 - 19043458
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||| |||||||||||||||||||||||    
T  19043491 caagtcaatagcactaggccaacccaagtgggtt 19043458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 70
Target Start/End: Complemental strand, 25627090 - 25627057
Alignment:
Q  37 caagtcaataccactaggccaacccaagtgggtt 70  Q
    |||| |||||||||||||||||||||||||||||    
T  25627090 caagccaataccactaggccaacccaagtgggtt 25627057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 26078099 - 26078128
Alignment:
Q  42 caataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||||||||||||||||||||    
T  26078099 caataccactaggccaacccaagtgggttt 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 34984862 - 34984805
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || |  |||| |||||||||||| |||||||||||||||||    
T  34984862 aggaggagcacactcccaggttccaagccaataccactagaccaacccaagtgggttt 34984805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 1410668 - 1410728
Alignment:
Q  3 ctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    |||||| ||| |||||||||||||||  | ||| |||||||||||||| || |||||||||    
T  1410668 ctgagacctcgaggaggagcacactcccatatcccaagtcaataccaccagaccaacccaa 1410728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 16457866 - 16457810
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  || || |||| ||||||||| ||||||||| |||||||||    
T  16457866 aggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 41797832 - 41797888
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||| ||| |||||||||| |||||| | ||| |||||| |||||||||    
T  41797832 aggaggagcacattctcagatctcaagccaatacaattagaccaaccaaagtgggtt 41797888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 12188323 - 12188380
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||||||||  || || |||| ||||||||||||||||||||||||||||||    
T  12188323 aggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33549173 - 33549102
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtttt 72  Q
    |||||||| ||| |||||||||||||||  || || |||| ||||||||| || ||||||||||||||||||    
T  33549173 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtttt 33549102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 34444858 - 34444809
Alignment:
Q  15 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 64  Q
    ||||||||||||||| || || |||||||||||||| |||||||||||||    
T  34444858 ggaggagcacactctaaggtcccaagtcaataccaccaggccaacccaag 34444809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 24641210 - 24641266
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  ||||| |||||||||||||| | |||||||||| ||||||    
T  24641210 aggaggagcacactcccagatcccaagtcaataccaccaagccaacccaaatgggtt 24641266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 32613150 - 32613214
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtggg 68  Q
    ||||||||  || ||||||||||||  ||| | |||||||||||||| |||||||||||||||||    
T  32613150 tgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10338181 - 10338251
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||  ||||||||||||||| ||| || |||| ||||||||| | ||||||||||||| ||||    
T  10338181 acctgagaccttgaggaggagcacactcctaggtcccaagccaataccaccatgccaacccaagtgagttt 10338251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12234514 - 12234584
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| ||  |||||||||||  || || |||||||||||||| ||||||||| ||||||||||    
T  12234514 acctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggttt 12234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31622998 - 31623068
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||| ||| |||||||||||||||  || || |||| |||||||||  | |||||||||||||||||    
T  31622998 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggttt 31623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 34877095 - 34877149
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||| | | |||||  ||||| |||||||||||||||||||||||||||    
T  34877095 gaggagcacattttcagatcctaagtctataccactaggccaacccaagtgggtt 34877149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 13330119 - 13330086
Alignment:
Q  38 aagtcaataccactaggccaacccaagtgggttt 71  Q
    ||||||||||||||||| ||||||||||||||||    
T  13330119 aagtcaataccactaggtcaacccaagtgggttt 13330086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30127469 - 30127400
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| | |||||||||||||  ||| | |||| ||||||||| || ||||||||||||||||    
T  30127469 acctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggtt 30127400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Original strand, 32201904 - 32201961
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||||||| ||||| |||| ||||||||| | | |||||||| ||||||    
T  32201904 aaggaggagcacactctgagatcccaagccaataccaccaagtcaacccaaatgggtt 32201961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 3968215 - 3968263
Alignment:
Q  15 ggaggagcacactcttagatctcaagtcaataccactaggccaacccaa 63  Q
    ||||||||||||||| |  |||||||||||||||| ||| |||||||||    
T  3968215 ggaggagcacactctaaagtctcaagtcaataccaatagaccaacccaa 3968263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 71
Target Start/End: Original strand, 6663150 - 6663190
Alignment:
Q  31 agatctcaagtcaataccactaggccaacccaagtgggttt 71  Q
    |||||||||| ||||||||||| ||||||||||||| ||||    
T  6663150 agatctcaagccaataccactatgccaacccaagtgtgttt 6663190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 6776627 - 6776679
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    ||||||||||||| |  ||||| |||| ||||||||| |||||||||||||||    
T  6776627 aggaggagcacacccccagatcccaagccaataccaccaggccaacccaagtg 6776679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 13227178 - 13227234
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||||||||  ||||||||   |||||||||  ||||||||||||||||||    
T  13227178 aggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 31886311 - 31886275
Alignment:
Q  13 aaggaggagcacactcttagatctcaagtcaatacca 49  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  31886311 aaggaggagcacactattagatcacaagtcaatacca 31886275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 24107 - 24053
Alignment:
Q  16 gaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||||||||| ||  || ||||||||||||| ||||||||||||||||||||    
T  24107 gaggagcacactcctaagtcccaagtcaataccattaggccaacccaagtgggtt 24053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15330 - 15399
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||| ||| |||||||||||||||  || || |||| ||||||||| || ||||||||||||||||    
T  15330 acctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 42540 - 42596
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    |||||||||| ||||  ||||  ||||||||||||||||||||||||||| ||||||    
T  42540 aggaggagcatactcccagattccaagtcaataccactaggccaacccaactgggtt 42596  T

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Target: scaffold0299 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 11597 - 11534
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaag 64  Q
    |||||||| ||| |||||||||||||||  ||||| |||| ||||||||| |||||| ||||||    
T  11597 acctgagacctcgaggaggagcacactcccagatcccaagccaataccaccaggccatcccaag 11534  T

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Target: scaffold0517 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 7736 - 7802
Alignment:
Q  4 tgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||| || ||||||||||||||| | || ||||||| ||||||||| || ||||||||||| ||||    
T  7736 tgagaccttaaggaggagcacactttcaggtctcaagccaataccaccagaccaacccaagttggtt 7802  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 94978 - 95044
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgg 67  Q
    |||||||| ||  |||||||||||||||  || |  |||| ||||||||||||||||||||||||||    
T  94978 acctgagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgg 95044  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13053 - 13118
Alignment:
Q  1 acctgagatctcaaggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtg 66  Q
    |||||||| ||  |||||||||||||||  |||||||||| ||||||||| | ||||||| |||||    
T  13053 acctgagaccttgaggaggagcacactcccagatctcaagccaataccaccaagccaaccgaagtg 13118  T

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Target: scaffold0187 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 12442 - 12498
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||| |||||| | || | ||||||||||||||| |||||||||||| ||||||    
T  12442 aggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtt 12498  T

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Target: scaffold0187; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 22770 - 22826
Alignment:
Q  14 aggaggagcacactcttagatctcaagtcaataccactaggccaacccaagtgggtt 70  Q
    ||||||| |||||| | || | ||||||||||||||| |||||||||||| ||||||    
T  22770 aggaggatcacactttcaggtttcaagtcaataccaccaggccaacccaaatgggtt 22826  T

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