View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_128 (Length: 269)
Name: NF11069A_low_128
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_128 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 24 - 269
Target Start/End: Complemental strand, 23072841 - 23072596
Alignment:
| Q |
24 |
gcttcaccatatgtcgaagactacgtctaaagcttctctctatttgtcgaatactacatctaaggcttctccaattgctgaaatatgccttgttggtcga |
123 |
Q |
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| T |
23072841 |
gcttcaccatttgtcgaagactacatctaaggcttctctctatttgtcgaatactacatctaagacttctccaattgttgaaacatgccttgttggtcga |
23072742 |
T |
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| Q |
124 |
aatcctgacttctccaaaatcagcatatcttctctttggacttagaaaatcttgtagcctcgtatttccttttcttcgtcgaaacaacccttttaaaaat |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
23072741 |
aatcctgacttctccaaaatcagcatatcttctctttggacttagaaaatcttgtagcctcgtatttcctcttcttcgtcgaaacaacccttttaaaaat |
23072642 |
T |
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| Q |
224 |
acaggctaaaaacgacacatttgaggtagtaccaaaatactcttga |
269 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
23072641 |
acaggctaaaaacgacacatttgaggtagtagcaaaatactcttga |
23072596 |
T |
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