View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_140 (Length: 259)
Name: NF11069A_low_140
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_140 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 22421542 - 22421756
Alignment:
| Q |
38 |
aaccatttagagagagtaagaagaactcacatgttgaaaaagtgtataataatcaccaaaataaataacacgcttcaaatccaaagcaataacagcattg |
137 |
Q |
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| T |
22421542 |
aaccatttagagagagtaagaagaactcacatgttgaaaaagtgtataataatcaccaaaataaataacacgcttcaaatccaaagcaataacagcattg |
22421641 |
T |
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| Q |
138 |
aaaccttcaatcaaagccataagctccacaacaattttcctactttcattcccaacaacagccttagaaatttccaatatcaaattatcctcatcatcac |
237 |
Q |
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|||||||||||||||||||||||||||||| ||||||| | ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
22421642 |
aaaccttcaatcaaagccataagctccacagcaattttacgactctcattcccatcaacagtcttagaaatttccaatatcaaattatcctcatcatcac |
22421741 |
T |
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| Q |
238 |
aaacagcaacaccaa |
252 |
Q |
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||||||||||||||| |
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| T |
22421742 |
aaacagcaacaccaa |
22421756 |
T |
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