View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_149 (Length: 252)
Name: NF11069A_low_149
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_149 |
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Alignment Details
Target: chr1 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 1714685 - 1714443
Alignment:
| Q |
1 |
aatattacattttcttttgttacaactcacaatattacatttaaaggattcaaataataaagattaatacacacacatgtgtatattgtcctaaccatat |
100 |
Q |
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| T |
1714685 |
aatattacattttcttttgttacaactcacaatattacatttaaaggattcaaataataaagattaatacacacacatgtgtatattgtcctaaccatat |
1714586 |
T |
|
| Q |
101 |
gaattgataacatgtaacatggttgcaggattaaaggtacagttgatgctggttctggttgggatagatggttcggaggagcacacaactctcgaaatca |
200 |
Q |
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| T |
1714585 |
gagttgataacatgtaacatggttgcaggattaaaggtacagttgatgctggttctggttgggatagatggttcggaggagcacacaactctcgaaatca |
1714486 |
T |
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| Q |
201 |
taagcgctggatttagaaaatgttttatagttgtatacatatt |
243 |
Q |
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| T |
1714485 |
taagcgctggatttagaaaatgttttttagttgtatacatatt |
1714443 |
T |
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