View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11069A_low_176 (Length: 246)

Name: NF11069A_low_176
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11069A_low_176
NF11069A_low_176
[»] chr4 (35 HSPs)
chr4 (79-246)||(26665302-26665469)
chr4 (22-78)||(8392982-8393038)
chr4 (22-78)||(8395191-8395247)
chr4 (22-79)||(5135648-5135705)
chr4 (22-78)||(5137875-5137931)
chr4 (22-78)||(7122267-7122323)
chr4 (22-78)||(7124489-7124545)
chr4 (22-81)||(3814549-3814608)
chr4 (24-78)||(31495847-31495902)
chr4 (22-79)||(18860465-18860522)
chr4 (22-78)||(9223899-9223955)
chr4 (22-78)||(9228686-9228742)
chr4 (22-78)||(18856253-18856309)
chr4 (22-78)||(24742521-24742577)
chr4 (22-82)||(29761183-29761243)
chr4 (22-78)||(51520994-51521050)
chr4 (22-78)||(56141511-56141567)
chr4 (24-78)||(13992824-13992879)
chr4 (22-80)||(5733191-5733249)
chr4 (22-71)||(3778116-3778165)
chr4 (22-71)||(5143810-5143859)
chr4 (22-71)||(8689044-8689093)
chr4 (22-71)||(16628353-16628402)
chr4 (22-71)||(38151918-38151967)
chr4 (22-71)||(45347324-45347373)
chr4 (24-78)||(28467977-28468032)
chr4 (22-71)||(5148245-5148294)
chr4 (22-71)||(5268699-5268748)
chr4 (22-71)||(6742896-6742945)
chr4 (22-71)||(10047933-10047982)
chr4 (22-71)||(16622774-16622823)
chr4 (24-79)||(31985126-31985182)
chr4 (22-71)||(54867746-54867795)
chr4 (22-66)||(36314716-36314760)
chr4 (22-66)||(36328925-36328969)
[»] chr7 (30 HSPs)
chr7 (22-81)||(1562531-1562590)
chr7 (22-79)||(32060832-32060889)
chr7 (22-78)||(6592865-6592921)
chr7 (22-79)||(6595081-6595138)
chr7 (21-78)||(20343500-20343557)
chr7 (22-78)||(18392724-18392780)
chr7 (24-78)||(24789426-24789481)
chr7 (22-79)||(12406801-12406858)
chr7 (21-78)||(18390505-18390562)
chr7 (22-78)||(2058548-2058604)
chr7 (22-78)||(4873665-4873721)
chr7 (22-78)||(20357028-20357084)
chr7 (22-78)||(21640367-21640423)
chr7 (24-66)||(43504666-43504708)
chr7 (21-66)||(24023831-24023876)
chr7 (22-78)||(12397436-12397492)
chr7 (22-78)||(31109070-31109126)
chr7 (24-78)||(39730933-39730988)
chr7 (24-66)||(1532897-1532939)
chr7 (22-71)||(21983810-21983859)
chr7 (24-79)||(48408397-48408453)
chr7 (24-78)||(18414220-18414275)
chr7 (22-71)||(79956-80005)
chr7 (26-66)||(21646590-21646630)
chr7 (22-66)||(21811751-21811795)
chr7 (22-66)||(21989474-21989518)
chr7 (22-66)||(47264210-47264254)
chr7 (24-78)||(18409344-18409399)
chr7 (22-66)||(2479903-2479947)
chr7 (22-66)||(44847632-44847676)
[»] chr5 (41 HSPs)
chr5 (21-79)||(22536795-22536853)
chr5 (22-78)||(10592844-10592900)
chr5 (22-80)||(40379676-40379734)
chr5 (22-78)||(25077706-25077762)
chr5 (22-78)||(25135675-25135731)
chr5 (22-78)||(16543994-16544050)
chr5 (22-78)||(16546216-16546272)
chr5 (22-82)||(29402546-29402606)
chr5 (22-78)||(40381889-40381945)
chr5 (24-78)||(9789754-9789809)
chr5 (24-78)||(18442178-18442233)
chr5 (24-78)||(29719965-29720020)
chr5 (24-78)||(29722152-29722207)
chr5 (24-78)||(29752335-29752390)
chr5 (22-79)||(27450353-27450410)
chr5 (22-78)||(1456638-1456694)
chr5 (27-78)||(29751672-29751724)
chr5 (22-78)||(30631892-30631948)
chr5 (22-78)||(31180774-31180830)
chr5 (22-78)||(43592798-43592854)
chr5 (22-78)||(43599262-43599318)
chr5 (22-78)||(43604754-43604810)
chr5 (22-78)||(43610246-43610302)
chr5 (24-78)||(26177466-26177521)
chr5 (22-78)||(27445510-27445566)
chr5 (24-78)||(16407641-16407696)
chr5 (22-71)||(14520797-14520846)
chr5 (22-79)||(15045223-15045280)
chr5 (22-79)||(37556124-37556181)
chr5 (22-66)||(37560959-37561003)
chr5 (24-78)||(15465070-15465125)
chr5 (24-78)||(16409077-16409132)
chr5 (24-66)||(26170370-26170412)
chr5 (29-78)||(35388196-35388246)
chr5 (24-66)||(36931856-36931898)
chr5 (24-65)||(24136429-24136470)
chr5 (35-78)||(43625605-43625648)
chr5 (21-78)||(9352807-9352865)
chr5 (22-71)||(12083658-12083707)
chr5 (22-71)||(28807083-28807132)
chr5 (26-66)||(11916457-11916497)
[»] chr3 (55 HSPs)
chr3 (22-80)||(45282583-45282641)
chr3 (22-78)||(3617034-3617090)
chr3 (22-78)||(6718288-6718344)
chr3 (22-78)||(54634710-54634766)
chr3 (21-79)||(25637012-25637070)
chr3 (22-79)||(6716084-6716141)
chr3 (22-78)||(4599051-4599107)
chr3 (22-78)||(4601272-4601328)
chr3 (22-78)||(10055805-10055861)
chr3 (22-78)||(10058027-10058083)
chr3 (22-78)||(10060249-10060305)
chr3 (22-78)||(10062471-10062527)
chr3 (22-78)||(10064693-10064749)
chr3 (22-78)||(10066915-10066971)
chr3 (22-78)||(10208778-10208834)
chr3 (22-78)||(10210978-10211034)
chr3 (22-83)||(7167826-7167887)
chr3 (22-79)||(40372255-40372312)
chr3 (22-78)||(22172662-22172718)
chr3 (24-78)||(800685-800740)
chr3 (22-80)||(28501150-28501208)
chr3 (24-80)||(26928078-26928135)
chr3 (22-78)||(8477946-8478002)
chr3 (22-78)||(8738542-8738598)
chr3 (22-78)||(9090780-9090836)
chr3 (22-78)||(28503319-28503375)
chr3 (24-78)||(7782657-7782712)
chr3 (24-78)||(23198475-23198530)
chr3 (24-78)||(23200674-23200729)
chr3 (22-69)||(40734084-40734131)
chr3 (22-80)||(18656973-18657031)
chr3 (22-71)||(16264897-16264946)
chr3 (22-71)||(21711769-21711818)
chr3 (22-71)||(30709266-30709315)
chr3 (22-78)||(32143871-32143928)
chr3 (22-71)||(36029660-36029709)
chr3 (22-66)||(27027274-27027318)
chr3 (22-66)||(27974446-27974490)
chr3 (24-79)||(37726244-37726300)
chr3 (21-78)||(37408036-37408094)
chr3 (22-71)||(39032025-39032074)
chr3 (27-78)||(1306552-1306604)
chr3 (22-66)||(2672431-2672475)
chr3 (22-66)||(2676587-2676631)
chr3 (28-71)||(1730916-1730959)
chr3 (22-65)||(27985971-27986014)
chr3 (24-78)||(33386137-33386192)
chr3 (22-69)||(40735015-40735062)
chr3 (22-71)||(27038609-27038658)
chr3 (22-79)||(27352080-27352137)
chr3 (22-71)||(35926058-35926106)
chr3 (22-71)||(40592252-40592301)
chr3 (22-78)||(40845222-40845279)
chr3 (22-71)||(48438783-48438832)
chr3 (22-78)||(16498637-16498693)
[»] chr6 (35 HSPs)
chr6 (22-79)||(16579045-16579102)
chr6 (22-79)||(16616278-16616335)
chr6 (22-80)||(6136491-6136549)
chr6 (22-78)||(16554454-16554510)
chr6 (22-78)||(16631010-16631066)
chr6 (22-78)||(16652716-16652772)
chr6 (26-78)||(25420797-25420849)
chr6 (22-88)||(34151818-34151884)
chr6 (22-88)||(34164434-34164500)
chr6 (21-78)||(6026834-6026891)
chr6 (21-70)||(27647476-27647525)
chr6 (22-83)||(30125013-30125074)
chr6 (22-78)||(33342632-33342688)
chr6 (22-78)||(34166666-34166722)
chr6 (24-80)||(411683-411740)
chr6 (22-78)||(5266597-5266653)
chr6 (22-78)||(11857511-11857567)
chr6 (22-78)||(14737085-14737141)
chr6 (22-78)||(14741926-14741982)
chr6 (22-78)||(22010189-22010245)
chr6 (24-78)||(3073288-3073343)
chr6 (24-80)||(6097931-6097988)
chr6 (22-79)||(13150848-13150905)
chr6 (24-78)||(26253589-26253644)
chr6 (22-79)||(6439027-6439084)
chr6 (23-71)||(28155097-28155145)
chr6 (27-66)||(5674242-5674281)
chr6 (24-78)||(22709590-22709645)
chr6 (22-71)||(5016976-5017025)
chr6 (22-71)||(31085953-31086002)
chr6 (27-65)||(2172052-2172090)
chr6 (22-71)||(5344008-5344057)
chr6 (26-71)||(21272469-21272514)
chr6 (22-70)||(5571757-5571805)
chr6 (22-66)||(23896900-23896944)
[»] chr2 (23 HSPs)
chr2 (22-79)||(12647911-12647968)
chr2 (22-81)||(32247296-32247355)
chr2 (22-80)||(9295860-9295918)
chr2 (22-79)||(11098386-11098443)
chr2 (22-79)||(39811476-39811533)
chr2 (22-78)||(14292069-14292125)
chr2 (22-78)||(44310471-44310527)
chr2 (24-78)||(6266274-6266329)
chr2 (24-79)||(4484868-4484924)
chr2 (24-78)||(32289148-32289203)
chr2 (24-66)||(25410211-25410253)
chr2 (22-71)||(8389631-8389680)
chr2 (27-78)||(30832921-30832973)
chr2 (24-78)||(40739402-40739457)
chr2 (22-71)||(10706733-10706782)
chr2 (22-71)||(21630512-21630561)
chr2 (26-71)||(33528105-33528150)
chr2 (22-71)||(36757425-36757474)
chr2 (22-71)||(39483444-39483493)
chr2 (24-79)||(3492322-3492378)
chr2 (27-71)||(20522794-20522838)
chr2 (22-66)||(28258682-28258726)
chr2 (22-71)||(23077952-23078001)
[»] chr1 (25 HSPs)
chr1 (22-79)||(44203217-44203274)
chr1 (22-78)||(9036003-9036059)
chr1 (24-78)||(21053540-21053594)
chr1 (24-78)||(9986785-9986840)
chr1 (24-78)||(20622766-20622821)
chr1 (22-80)||(39446026-39446084)
chr1 (22-78)||(24793666-24793722)
chr1 (22-78)||(44023377-44023433)
chr1 (24-78)||(40281958-40282013)
chr1 (21-78)||(13604095-13604153)
chr1 (22-78)||(1054514-1054570)
chr1 (22-66)||(41391129-41391173)
chr1 (24-78)||(24202251-24202306)
chr1 (22-71)||(13598968-13599017)
chr1 (22-71)||(25439406-25439455)
chr1 (22-71)||(25444599-25444648)
chr1 (24-80)||(51764988-51765045)
chr1 (22-66)||(21536125-21536169)
chr1 (22-66)||(41398765-41398809)
chr1 (24-78)||(19360912-19360967)
chr1 (24-78)||(19365768-19365823)
chr1 (22-65)||(37070335-37070378)
chr1 (22-66)||(3282274-3282318)
chr1 (22-78)||(13659841-13659897)
chr1 (22-62)||(16124197-16124237)
[»] scaffold0565 (1 HSPs)
scaffold0565 (22-78)||(3129-3185)
[»] chr8 (25 HSPs)
chr8 (22-81)||(25689558-25689617)
chr8 (22-78)||(15290143-15290199)
chr8 (22-78)||(15470512-15470568)
chr8 (22-78)||(42575853-42575909)
chr8 (21-78)||(3439088-3439145)
chr8 (22-80)||(4759532-4759590)
chr8 (22-79)||(25327663-25327720)
chr8 (22-78)||(10683739-10683795)
chr8 (22-78)||(10688618-10688674)
chr8 (22-78)||(18870021-18870077)
chr8 (22-78)||(30656226-30656282)
chr8 (22-78)||(33037287-33037343)
chr8 (22-78)||(36979958-36980014)
chr8 (22-78)||(39784325-39784381)
chr8 (24-78)||(2627318-2627373)
chr8 (24-82)||(26288462-26288521)
chr8 (24-82)||(26301719-26301778)
chr8 (24-82)||(26313713-26313772)
chr8 (22-78)||(7289427-7289483)
chr8 (22-78)||(18852627-18852683)
chr8 (22-71)||(5701959-5702008)
chr8 (22-71)||(6311879-6311928)
chr8 (22-66)||(7412895-7412939)
chr8 (24-78)||(31042908-31042963)
chr8 (22-66)||(4456576-4456620)
[»] scaffold0674 (1 HSPs)
scaffold0674 (22-78)||(4254-4310)
[»] scaffold0137 (1 HSPs)
scaffold0137 (22-78)||(5859-5915)
[»] scaffold1455 (1 HSPs)
scaffold1455 (22-78)||(1709-1765)
[»] scaffold0665 (1 HSPs)
scaffold0665 (22-78)||(8217-8273)
[»] scaffold0135 (1 HSPs)
scaffold0135 (22-78)||(34554-34610)
[»] scaffold0006 (4 HSPs)
scaffold0006 (21-78)||(132752-132810)
scaffold0006 (22-71)||(6253-6302)
scaffold0006 (22-71)||(3061-3110)
scaffold0006 (22-78)||(149602-149658)
[»] scaffold0464 (1 HSPs)
scaffold0464 (22-79)||(889-946)
[»] scaffold0355 (1 HSPs)
scaffold0355 (22-79)||(3336-3393)
[»] scaffold0188 (1 HSPs)
scaffold0188 (24-79)||(17430-17486)
[»] scaffold0491 (2 HSPs)
scaffold0491 (24-78)||(9253-9308)
scaffold0491 (24-81)||(11698-11756)
[»] scaffold0140 (1 HSPs)
scaffold0140 (24-78)||(7911-7966)
[»] scaffold0098 (1 HSPs)
scaffold0098 (26-79)||(45751-45805)
[»] scaffold0286 (1 HSPs)
scaffold0286 (27-65)||(21953-21991)
[»] scaffold0087 (2 HSPs)
scaffold0087 (22-71)||(36332-36381)
scaffold0087 (21-66)||(43447-43492)
[»] scaffold0510 (1 HSPs)
scaffold0510 (22-66)||(1096-1140)


Alignment Details
Target: chr4 (Bit Score: 160; Significance: 2e-85; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 79 - 246
Target Start/End: Complemental strand, 26665469 - 26665302
Alignment:
Q  79 atatcttttatatgacttaactcacacttgacaaggagacatctggctagtttgcaatatatataggcgtaaactaattctatgggtaatattgatggaa 178  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26665469 atatcttttatatgacttaattcacacttgacaaagagacatctggctagtttgcaatatatataggcgtaaactaattctatgggtaatattgatggaa 26665370  T
Q  179 ataaaaaacatgagacgtgcggtggagagtgaagagtaacatgttataacaaaacagactagtgtttg 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26665369 ataaaaaacatgagacgtgcggtggagagtgaagagtaacatgttataacaaaacagactagtgtttg 26665302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8393038 - 8392982
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8393038 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8395247 - 8395191
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8395247 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 5135705 - 5135648
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  5135705 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaacaa 5135648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 5137931 - 5137875
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  5137931 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7122323 - 7122267
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7122323 aatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaaca 7122267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7124545 - 7124489
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7124545 aatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaactcaaca 7124489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 3814549 - 3814608
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaata 81  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  3814549 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaata 3814608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 31495847 - 31495902
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  31495847 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 18860465 - 18860522
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  18860465 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacaa 18860522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9223955 - 9223899
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9223955 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9223899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9228742 - 9228686
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9228742 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9228686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 18856253 - 18856309
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  18856253 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 18856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 24742521 - 24742577
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  24742521 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 29761183 - 29761243
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaatat 82  Q
    ||||||||||||||||| |||||||||||||||||||||||||||  ||| ||||||||||    
T  29761183 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagcaaatatcaacaatat 29761243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 51520994 - 51521050
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  51520994 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 51521050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 56141567 - 56141511
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  56141567 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 56141511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 13992824 - 13992879
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  13992824 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 5733191 - 5733249
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    |||||||||| |||||| |||||||| |||||||||||||||||| |||| ||||||||    
T  5733191 aatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaacaat 5733249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 3778116 - 3778165
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 3778165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5143810 - 5143859
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  5143810 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5143859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 8689093 - 8689044
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  8689093 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8689044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 16628402 - 16628353
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  16628402 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 16628353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 38151967 - 38151918
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  38151967 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 38151918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 45347373 - 45347324
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||||||||||||||  |||||||||||||||||||||||||| ||||    
T  45347373 aatcgtgtcacgatttctttgttcttccagaccacaaatttgaagccaat 45347324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 28468032 - 28467977
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  28468032 tcgtgtcacgatttctctgttcttccataccacaaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5148245 - 5148294
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| || |||||||| ||||||||||||||| ||||    
T  5148245 aatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaat 5148294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5268748 - 5268699
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||| |||||||||||| ||||||||||| ||||||||||||||| ||||    
T  5268748 aatcctgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5268699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 6742945 - 6742896
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| |||| |||||||||| ||||    
T  6742945 aatcgtgtcacgatttctctgttcttccaaaccataaatttgaagccaat 6742896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 10047933 - 10047982
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||| ||||    
T  10047933 aatcgtgtcacgatttatctgttcttccaaaccacaaatttgaagccaat 10047982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 16622823 - 16622774
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||| ||| ||||    
T  16622823 aatcgtgtcacgatttctctgttcttccaaaccacaaattttaagccaat 16622774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 31985182 - 31985126
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 79  Q
    ||||||||||||||| |||||||| |||| ||||||||||||| | |||||||||||    
T  31985182 tcgtgtcacgatttctctgttctttcagatcacaaatttgaagccaaatctcaacaa 31985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 54867746 - 54867795
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||| ||| || |||||||| ||||||||||||||| ||||    
T  54867746 aatcgtgtcacgacttctctattcttccaaaccacaaatttgaagccaat 54867795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 36314760 - 36314716
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| || |||||| | |||||||||||||||    
T  36314760 aatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 36328969 - 36328925
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| || |||||| | |||||||||||||||    
T  36328969 aatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 1562531 - 1562590
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaata 81  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562531 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaata 1562590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 32060832 - 32060889
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060832 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 32060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 6592865 - 6592921
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592865 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 6595081 - 6595138
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6595081 aatcgtgtcacgatttccctgtttttccagaccacaaatttgaagacaatctcaacaa 6595138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 20343557 - 20343500
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20343557 caatcgcgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 18392724 - 18392780
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18392724 aatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 24789481 - 24789426
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  24789481 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 12406801 - 12406858
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  12406801 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaa 12406858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 18390505 - 18390562
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  18390505 caatcgtggcacgatttccctgttcttctaaaccacaaatttgaagacaatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 2058548 - 2058604
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  2058548 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 2058604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 4873665 - 4873721
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  4873665 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 4873721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 20357084 - 20357028
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  20357084 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 20357028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 21640367 - 21640423
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  21640367 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 21640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 43504666 - 43504708
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43504666 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 43504708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 24023876 - 24023831
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  24023876 caatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 12397436 - 12397492
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  12397436 aatcgtgtcgcgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 12397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 31109126 - 31109070
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||    
T  31109126 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatttcaaca 31109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 39730988 - 39730933
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  39730988 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 1532939 - 1532897
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  1532939 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1532897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 21983810 - 21983859
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  21983810 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21983859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 48408453 - 48408397
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 79  Q
    ||||||||||||||| |||||||| |||||||||||||||||| | |||||||||||    
T  48408453 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 48408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 18414220 - 18414275
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||||||||||| |||||||||| | ||||||||||    
T  18414220 tcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 79956 - 80005
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| | ||||||||||||| ||||    
T  79956 aatcgtgtcacgatttctctgttcttccaaatcacaaatttgaagccaat 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 21646590 - 21646630
Alignment:
Q  26 gtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||| ||||||||||| |||||||||||||||    
T  21646590 gtgtcacgatttctctgttcttccaaaccacaaatttgaag 21646630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21811795 - 21811751
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||    
T  21811795 aatcgtgacacgattcctctgttcttccagaccacaaatttgaag 21811751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 21989474 - 21989518
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||    
T  21989474 aatcttgtcacgatttctctgttcttccaaaccacaaatttgaag 21989518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 47264210 - 47264254
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| || |||||||| |||||||||||||||    
T  47264210 aatcgtgtcacgatttctctattcttccaaaccacaaatttgaag 47264254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 18409344 - 18409399
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||| |||||||| ||||||||||||| ||||||||||||| | ||||||||||    
T  18409344 tcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 2479903 - 2479947
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||| ||||| |||||||| || |||||||||||||||    
T  2479903 aatcgtgtcacaatttctctgttcttacaaaccacaaatttgaag 2479947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 44847676 - 44847632
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| ||||||||  | |||||||||||||||    
T  44847676 aatcgtgtcacgatttctctgttcttttaaaccacaaatttgaag 44847632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 4e-25; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 22536795 - 22536853
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22536795 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 22536853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10592900 - 10592844
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10592900 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 40379734 - 40379676
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40379734 aatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 40379676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 25077762 - 25077706
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25077762 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaactcaaca 25077706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 25135731 - 25135675
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25135731 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaactcaaca 25135675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16544050 - 16543994
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16544050 aatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16546272 - 16546216
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  16546272 aatcgtggcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 29402606 - 29402546
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaatat 82  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||    
T  29402606 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaatat 29402546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 40381945 - 40381889
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  40381945 aatcgtggcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 9789754 - 9789809
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9789754 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 18442178 - 18442233
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18442178 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 29720020 - 29719965
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29720020 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 29722207 - 29722152
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29722207 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 29752335 - 29752390
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29752335 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 27450353 - 27450410
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  27450353 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaa 27450410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 1456694 - 1456638
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1456694 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 1456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 29751672 - 29751724
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29751672 tgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29751724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 30631892 - 30631948
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  30631892 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30631948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 31180774 - 31180830
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  31180774 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 31180830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 43592798 - 43592854
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  43592798 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43592854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 43599262 - 43599318
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  43599262 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43599318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 43604754 - 43604810
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  43604754 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43604810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 43610246 - 43610302
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  43610246 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 43610302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 26177521 - 26177466
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  26177521 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 27445510 - 27445566
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||||||    
T  27445510 aatcgtgtcacgatttctctgttcttctagaccacaaatttgaagccaatatcaaca 27445566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 16407696 - 16407641
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  16407696 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 14520797 - 14520846
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  14520797 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 14520846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 15045223 - 15045280
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||| || |||||||||||| |||| |||||||    
T  15045223 aatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaatatcaacaa 15045280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 37556181 - 37556124
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| |||  |||||||    
T  37556181 aatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaattcaacaa 37556124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 37561003 - 37560959
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||| | |||||||||||||||||||||||||||    
T  37561003 aatcgtgtcacgattactctgttcttccagaccacaaatttgaag 37560959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 15465070 - 15465125
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  15465070 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 16409132 - 16409077
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  16409132 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 26170412 - 26170370
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  26170412 tcgtgtcacgatttccctgttcttccataccataaatttgaag 26170370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  29 tcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 36931898 - 36931856
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  36931898 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 36931856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 24136429 - 24136470
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaa 65  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  24136429 tcgtgtcacgatttctgtgttcttccagaccacaaatttgaa 24136470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 43625605 - 43625648
Alignment:
Q  35 tttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| ||||||||||||||||||||||||||| |||| ||||||    
T  43625605 tttctctgttcttccagaccacaaatttgaagccaatatcaaca 43625648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 9352865 - 9352807
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||| ||||||||||| |||||||| || ||||||||||||||| | ||||||||||    
T  9352865 caatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 12083707 - 12083658
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| |||| |||||| ||| ||||    
T  12083707 aatcgtgtcacgatttctctgttcttccaaaccataaatttaaagccaat 12083658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 28807132 - 28807083
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||| ||||||| | |||||||||||||||| |||||||||| ||||    
T  28807132 aatcgtgacacgattcctctgttcttccagaccataaatttgaagccaat 28807083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 11916497 - 11916457
Alignment:
Q  26 gtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||| |||||||| || |||||||||||||||    
T  11916497 gtgtcacgatttctctgttctttcaaaccacaaatttgaag 11916457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 45282641 - 45282583
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282641 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 45282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 3617090 - 3617034
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617090 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 6718344 - 6718288
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718344 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 54634766 - 54634710
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54634766 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 25637070 - 25637012
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  25637070 caatcgtgtcacgatttccctgttcttccagaccacaaatttaaagacaatctcaacaa 25637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 6716141 - 6716084
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6716141 aatcgtgtcacgatttccctgttcttccagaccacaaatttcaagacaatctcaacaa 6716084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 4599051 - 4599107
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4599051 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 4601272 - 4601328
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4601272 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10055861 - 10055805
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10055861 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 10055805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10058083 - 10058027
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10058083 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 10058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10060305 - 10060249
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10060305 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 10060249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10062527 - 10062471
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10062527 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 10062471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10064749 - 10064693
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10064749 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 10064693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10066971 - 10066915
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10066971 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 10066915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10208834 - 10208778
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  10208834 aatcgtgtcatgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10211034 - 10210978
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  10211034 aatcgtgtcacgatttccctgttcttccaaaccacaaatttaaagacaatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 7167826 - 7167887
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaatatc 83  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||||||    
T  7167826 aatcgtgtcacgatttctctgttcttccagaacacaaatttgaagccaatatcaacaatatc 7167887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 40372312 - 40372255
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  40372312 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaa 40372255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 22172718 - 22172662
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22172718 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22172662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 800740 - 800685
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  800740 tcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 28501208 - 28501150
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||||    
T  28501208 aatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaacaat 28501150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 26928135 - 26928078
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 80  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  26928135 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaat 26928078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 8477946 - 8478002
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8477946 aatcgtgtcacaatttctctgttcttccagaccacaaatttgaagccaatgtcaaca 8478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 8738598 - 8738542
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8738598 aatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8738542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9090836 - 9090780
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| |||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  9090836 aatcatgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 9090780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 28503375 - 28503319
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| |||||||||||| |||||||||||||| |||| ||||||    
T  28503375 aatcgtgtcacgatttctctgttcttccaggccacaaatttgaagccaatatcaaca 28503319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 7782657 - 7782712
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  7782657 tcgtgtcacgatttccctgttcttctagaccacaaatttgaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 23198475 - 23198530
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  23198475 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 23200674 - 23200729
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  23200674 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 40734131 - 40734084
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 69  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734131 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 18656973 - 18657031
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    |||||||||| |||||| |||||||| |||||||||||||||||| |||| ||||||||    
T  18656973 aatcgtgtcatgatttctctgttctttcagaccacaaatttgaagccaatatcaacaat 18657031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 16264897 - 16264946
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  16264897 aatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaagccaat 16264946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 21711769 - 21711818
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  21711769 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 21711818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 30709315 - 30709266
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  30709315 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 30709266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 32143871 - 32143928
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  32143871 aatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 36029660 - 36029709
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  36029660 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 36029709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 27027274 - 27027318
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  27027274 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 27974490 - 27974446
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  27974490 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27974446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 37726244 - 37726300
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 79  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  37726244 tcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 37726300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 37408094 - 37408036
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| | ||||||||||    
T  37408094 caatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaaca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 39032074 - 39032025
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| || |||||||||||| ||||    
T  39032074 aatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 39032025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 78
Target Start/End: Original strand, 1306552 - 1306604
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||| |||||||||||||||| |||||||||| | ||||||||||    
T  1306552 tgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 2672475 - 2672431
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||    
T  2672475 aatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2672431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 2676631 - 2676587
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||    
T  2676631 aatcgtgacacgattcctctgttcttccagaccacaaatttgaag 2676587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 1730959 - 1730916
Alignment:
Q  28 gtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaagccaat 1730916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 27986014 - 27985971
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 65  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||    
T  27986014 aatcgtgtcacgatttctctgttattccaaaccacaaatttgaa 27985971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 33386192 - 33386137
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| | |||||||||||||||| | ||||||||||    
T  33386192 tcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 40735062 - 40735015
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 69  Q
    ||||||||||||||||  |||||| |||| ||||||||||||||||||    
T  40735062 aatcgtgtcacgatttatctgttcatccaaaccacaaatttgaagaca 40735015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 27038609 - 27038658
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||| ||||| |||||||| |||||| ||||    
T  27038609 aatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaat 27038658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 27352137 - 27352080
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||  ||||||||| ||||||||||||| |||  ||| |||||||    
T  27352137 aatcgtgtcacgatttttctgttcttcgagaccacaaatttaaagctaatatcaacaa 27352080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 35926058 - 35926106
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||| ||||||||||| ||||    
T  35926058 aatcgtgtcacgatttctctgttcttccaaacc-caaatttgaagccaat 35926106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 40592301 - 40592252
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||| |||||||||||| | ||||||||| ||||||||||||||| ||||    
T  40592301 aatcatgtcacgatttctccgttcttccaaaccacaaatttgaagccaat 40592252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 40845222 - 40845279
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||| ||||||| ||| | || |||||||||||| ||||||||||    
T  40845222 aatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 48438783 - 48438832
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| |||||||| || ||||||||||| ||| ||||    
T  48438783 aatcgtgtcacgatttctctgttcttacaaaccacaaatttaaagccaat 48438832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16498693 - 16498637
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| |||||||||||| |||||  |||| ||||||||||||||| |||| ||||||    
T  16498693 aatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 16498637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 16579045 - 16579102
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579045 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 16579102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 16616335 - 16616278
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616335 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 16616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 6136491 - 6136549
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6136491 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaacaat 6136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16554510 - 16554454
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16554510 aatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16631066 - 16631010
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16631066 aatcatgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 16652772 - 16652716
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16652772 aatcgtgtcacgatttccctgttctttcagaccacaaatttgaagacaatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 25420849 - 25420797
Alignment:
Q  26 gtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25420849 gtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 34151884 - 34151818
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaatatctttta 88  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  34151884 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaactcaacaataactttta 34151818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 22 - 88
Target Start/End: Complemental strand, 34164500 - 34164434
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaatatctttta 88  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||| ||||||    
T  34164500 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaactcaacaataactttta 34164434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 6026891 - 6026834
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6026891 caatcgtgtcacgatttccctattcttccaaaccacaaatttgaagacaatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 27647525 - 27647476
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647525 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 27647476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 30125074 - 30125013
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaatatc 83  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  30125074 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaatatc 30125013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 33342632 - 33342688
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  33342632 aatcgtgtcacgatttccatgttcttccaaaccacaaatttgaagacaatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 34166722 - 34166666
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  34166722 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaaactcaaca 34166666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 411740 - 411683
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 80  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  411740 tcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaacaat 411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 5266597 - 5266653
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  5266597 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 5266653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 11857511 - 11857567
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  11857511 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 11857567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 14737141 - 14737085
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  14737141 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14737085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 14741982 - 14741926
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  14741982 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14741926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 22010245 - 22010189
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  22010245 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 22010189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 3073288 - 3073343
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  3073288 tcgtgtcacgattttcctgttcttccagaccacaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 6097931 - 6097988
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 80  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6097931 tcgtgtcaggatttccctgttcttccaaaccacaaatttgaagacaaatctcaacaat 6097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 13150905 - 13150848
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||| || |||||    
T  13150905 aatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaactaaacaa 13150848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 26253644 - 26253589
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||    
T  26253644 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 6439027 - 6439084
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    |||||||||||||||||  ||||||||||||||| |||||||||| |||| |||||||    
T  6439027 aatcgtgtcacgatttctatgttcttccagaccataaatttgaagccaatttcaacaa 6439084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 28155145 - 28155097
Alignment:
Q  23 atcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 28155097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 5674281 - 5674242
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  5674281 tgtcacgatttctctgttcttccagaccacaaatttgaag 5674242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 22709590 - 22709645
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||| |||||| ||||||||||||||||||||||||||| | ||||||||||    
T  22709590 tcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5017025 - 5016976
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||| ||||    
T  5017025 aatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 5016976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 31086002 - 31085953
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||| | ||||||||||||||| ||||    
T  31086002 aatcgtgtcacgatttctctgttcttctaaaccacaaatttgaagccaat 31085953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 2172052 - 2172090
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaa 65  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  2172052 tgtcccgatttctctgttcttccagaccacaaatttgaa 2172090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 5344008 - 5344057
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||| ||||||||| ||||||| ||| ||||||||||||||| ||||    
T  5344008 aatcgtgacacgatttctctgttctcccaaaccacaaatttgaagccaat 5344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 21272514 - 21272469
Alignment:
Q  26 gtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||||||||||||||||| |||| | ||||||||||||| ||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaagccaat 21272469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 5571805 - 5571757
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 70  Q
    ||||||||||||||||| || |||| ||| | |||||||||||||||||    
T  5571805 aatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaa 5571757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 23896900 - 23896944
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||  |||||||| || |||||||||||||||    
T  23896900 aatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 23896944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 12647911 - 12647968
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647911 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 12647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 81
Target Start/End: Original strand, 32247296 - 32247355
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaata 81  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||    
T  32247296 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaata 32247355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 9295918 - 9295860
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  9295918 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaat 9295860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 11098443 - 11098386
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  11098443 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaa 11098386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 39811533 - 39811476
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  39811533 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaa 39811476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 14292069 - 14292125
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  14292069 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 14292125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 44310527 - 44310471
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44310527 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 44310471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 6266329 - 6266274
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  6266329 tcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 4484868 - 4484924
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag-acaatctcaacaa 79  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  4484868 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagtaaaatctcaacaa 4484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 32289203 - 32289148
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  32289203 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 25410211 - 25410253
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  25410211 tcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25410253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 8389680 - 8389631
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  8389680 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 8389631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 78
Target Start/End: Complemental strand, 30832973 - 30832921
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  30832973 tgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 40739402 - 40739457
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||  ||||||||||||||||||||||||||| | ||||||||||    
T  40739402 tcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 10706782 - 10706733
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| || |||||||||||| ||||    
T  10706782 aatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaat 10706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 21630512 - 21630561
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| || |||||||||||| ||||    
T  21630512 aatcgtgtcacgatttctctgttcttccaaactacaaatttgaagccaat 21630561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 33528150 - 33528105
Alignment:
Q  26 gtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  33528150 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 33528105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 36757474 - 36757425
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||| ||||    
T  36757474 aatcgtgtcacgatttttctgttcttccaaaccacaaatttgaagccaat 36757425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 39483444 - 39483493
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||| ||||    
T  39483444 aatcgtgtcacaatttctctgttcttccaaaccacaaatttgaagccaat 39483493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 3492322 - 3492378
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 79  Q
    ||||||||| ||||| |||||||| |||||||||||||||||| | |||||||||||    
T  3492322 tcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 3492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 20522794 - 20522838
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 20522838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 28258726 - 28258682
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||    
T  28258726 aatcgtgtcacgatttctctgtttttccaaaccacaaatttgaag 28258682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 23078001 - 23077952
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| |||| || ||||||| ||||    
T  23078001 aatcgtgtcacgatttctctgttcttccaaaccaaaattttgaagccaat 23077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 44203274 - 44203217
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203274 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 44203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9036059 - 9036003
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036059 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 21053594 - 21053540
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21053594 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 9986840 - 9986785
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  9986840 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 20622766 - 20622821
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20622766 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 39446026 - 39446084
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  39446026 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaacaat 39446084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 24793722 - 24793666
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  24793722 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 24793666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 44023433 - 44023377
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  44023433 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 44023377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 40282013 - 40281958
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  40282013 tcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 13604153 - 13604095
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  13604153 caatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 1054570 - 1054514
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1054570 aatcgtgacacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1054514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 41391129 - 41391173
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| |||||||||||||||||||||||||||    
T  41391129 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 41391173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 24202306 - 24202251
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  24202306 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 13598968 - 13599017
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  13598968 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 13599017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 25439455 - 25439406
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  25439455 aatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 25444648 - 25444599
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||| | ||||||||||||||||||||||||||| ||||    
T  25444648 aatcgtgtcacgattgctctgttcttccagaccacaaatttgaagccaat 25444599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 80
Target Start/End: Complemental strand, 51765045 - 51764988
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 80  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| | ||||||||||||    
T  51765045 tcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaacaat 51764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 21536169 - 21536125
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  21536169 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21536125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 41398765 - 41398809
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||    
T  41398765 aatcgtgtcacgatttctctgttctttcagaccacaaatttgaag 41398809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 19360967 - 19360912
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  19360967 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 19365823 - 19365768
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  19365823 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 37070335 - 37070378
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 65  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||    
T  37070335 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 3282274 - 3282318
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||  ||||||||||  |||||||||||||||    
T  3282274 aatcgtgtcacgatttttctgttcttcctaaccacaaatttgaag 3282318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 13659841 - 13659897
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| |||||||||||| |||||  |||| ||||||||||||||| |||| ||||||    
T  13659841 aatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 13659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 16124237 - 16124197
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaattt 62  Q
    |||||| |||||||||| ||||||||||| |||||||||||    
T  16124237 aatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 3129 - 3185
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3129 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 25689617 - 25689558
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaata 81  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25689617 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagacaatctcaacaata 25689558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 15290199 - 15290143
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15290199 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 15470568 - 15470512
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  15470568 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 42575853 - 42575909
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42575853 aatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagacaatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 3439145 - 3439088
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3439145 caatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 4759590 - 4759532
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaat 80  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  4759590 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaat 4759532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 25327720 - 25327663
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  25327720 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaacaa 25327663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10683795 - 10683739
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10683795 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10683739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 10688674 - 10688618
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  10688674 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 10688618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 18870077 - 18870021
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  18870077 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 18870021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 30656226 - 30656282
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  30656226 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 30656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 33037343 - 33037287
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  33037343 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 33037287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 36979958 - 36980014
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  36979958 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 36980014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 39784381 - 39784325
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  39784381 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 39784325  T

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Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 2627373 - 2627318
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  2627373 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 26288462 - 26288521
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tctcaacaatat 82  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  26288462 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaatat 26288521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 26301719 - 26301778
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tctcaacaatat 82  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  26301719 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaatat 26301778  T

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Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 26313713 - 26313772
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa-tctcaacaatat 82  Q
    ||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||    
T  26313713 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaatat 26313772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 7289483 - 7289427
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| |||| ||||||    
T  7289483 aatcgtgtcactatttctctgttcttccagaccacaaatttgaagtcaatatcaaca 7289427  T

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Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 18852683 - 18852627
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  18852683 aatcgtatcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 18852627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 5702008 - 5701959
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  5702008 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 5701959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 6311879 - 6311928
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||||||| |||||| ||||||||||||||||||||||||||| ||||    
T  6311879 aatcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaat 6311928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 7412895 - 7412939
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  7412895 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 7412939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 31042963 - 31042908
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| || |||||||||||||||||||||||| | ||||||||||    
T  31042963 tcgtgtcacgatttctctattcttccagaccacaaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 4456576 - 4456620
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    |||||||||||||||||  |||||||||| |||||||||||||||    
T  4456576 aatcgtgtcacgatttctttgttcttccaaaccacaaatttgaag 4456620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 4254 - 4310
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4254 aatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 5915 - 5859
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5915 aatcgtggcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 1765 - 1709
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  1765 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatttcaaca 1709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 8217 - 8273
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  8217 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 8273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 34610 - 34554
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  34610 aatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaatatcaaca 34554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 132810 - 132752
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||    
T  132810 caatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctcaaca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 6253 - 6302
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| ||||    
T  6253 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaat 6302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 3061 - 3110
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||| ||||    
T  3061 aatcgtgtcatgatttctctgttcttccaaaccacaaatttgaagccaat 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 149602 - 149658
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaaca 78  Q
    |||| |||||||||||| |||||  |||| ||||||||||||||| |||| ||||||    
T  149602 aatcatgtcacgatttctctgtttctccaaaccacaaatttgaagccaatatcaaca 149658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 889 - 946
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||| |||| |||||||    
T  889 aatcgtgtcacgatttctctgttcttccataccacaaatttgaagccaatttcaacaa 946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 3393 - 3336
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaatctcaacaa 79  Q
    ||||||||||||||||| || |||||||||||||||||||||||| |||| |||||||    
T  3393 aatcgtgtcacgatttctcttttcttccagaccacaaatttgaagccaatatcaacaa 3336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 17486 - 17430
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 79  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||    
T  17486 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaa 17430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 78
Target Start/End: Original strand, 9253 - 9308
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  9253 tcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 11698 - 11756
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaata 81  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| | |||||||||||||    
T  11698 tcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatctcaacaata 11756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 7966 - 7911
Alignment:
Q  24 tcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 78  Q
    ||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||    
T  7966 tcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 45751 - 45805
Alignment:
Q  26 gtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaa 79  Q
    ||||||||||||| ||||||||||| ||||||||||||||| | |||||||||||    
T  45751 gtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 45805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Complemental strand, 21991 - 21953
Alignment:
Q  27 tgtcacgatttccctgttcttccagaccacaaatttgaa 65  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  21991 tgtcccgatttctctgttcttccagaccacaaatttgaa 21953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 71
Target Start/End: Complemental strand, 36381 - 36332
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaat 71  Q
    |||||| ||| |||||| ||||||||||| ||||||||||||||| ||||    
T  36381 aatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaat 36332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 43492 - 43447
Alignment:
Q  21 caatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    |||||||||||||||||| || |||||||| |||| ||||||||||    
T  43492 caatcgtgtcacgatttctctattcttccaaaccataaatttgaag 43447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 1140 - 1096
Alignment:
Q  22 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 66  Q
    ||||||||||||||||  |||||||| || |||||||||||||||    
T  1140 aatcgtgtcacgatttttctgttctttcaaaccacaaatttgaag 1096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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