View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11069A_low_191 (Length: 243)

Name: NF11069A_low_191
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11069A_low_191
NF11069A_low_191
[»] chr5 (47 HSPs)
chr5 (1-228)||(41663665-41663893)
chr5 (7-161)||(38476617-38476781)
chr5 (21-161)||(23040200-23040340)
chr5 (7-91)||(23040096-23040181)
chr5 (11-156)||(17825649-17825793)
chr5 (105-161)||(31576607-31576663)
chr5 (24-163)||(35302079-35302219)
chr5 (7-159)||(2373149-2373301)
chr5 (7-93)||(34125128-34125216)
chr5 (24-161)||(20653820-20653959)
chr5 (7-83)||(37961396-37961472)
chr5 (31-93)||(23765561-23765624)
chr5 (31-93)||(23815409-23815472)
chr5 (31-91)||(25557046-25557108)
chr5 (31-91)||(31055485-31055547)
chr5 (31-91)||(245666-245727)
chr5 (31-91)||(16901168-16901229)
chr5 (31-91)||(18695075-18695136)
chr5 (31-91)||(26639208-26639270)
chr5 (29-79)||(8645882-8645932)
chr5 (31-91)||(7187262-7187322)
chr5 (11-79)||(10293239-10293306)
chr5 (11-91)||(16307628-16307710)
chr5 (103-163)||(22940665-22940725)
chr5 (11-82)||(17704739-17704808)
chr5 (113-159)||(15885132-15885178)
chr5 (113-163)||(38834085-38834135)
chr5 (105-161)||(2373393-2373449)
chr5 (31-79)||(7835795-7835842)
chr5 (110-158)||(8646002-8646050)
chr5 (31-79)||(10379367-10379414)
chr5 (31-79)||(36641228-36641276)
chr5 (106-153)||(10452709-10452756)
chr5 (106-153)||(10453121-10453168)
chr5 (31-91)||(38408700-38408761)
chr5 (31-78)||(40428810-40428857)
chr5 (114-160)||(4800935-4800981)
chr5 (103-161)||(16650898-16650956)
chr5 (103-161)||(18486945-18487003)
chr5 (103-161)||(25523069-25523127)
chr5 (103-161)||(33160329-33160387)
chr5 (104-161)||(40255716-40255773)
chr5 (105-158)||(42195137-42195188)
chr5 (31-79)||(15885335-15885383)
chr5 (105-161)||(18695250-18695306)
chr5 (31-79)||(19169428-19169476)
chr5 (105-161)||(24025021-24025077)
[»] chr4 (54 HSPs)
chr4 (7-162)||(51291317-51291473)
chr4 (7-161)||(4098657-4098813)
chr4 (7-77)||(24626368-24626438)
chr4 (7-161)||(20919481-20919632)
chr4 (50-159)||(36729247-36729357)
chr4 (31-91)||(35475362-35475422)
chr4 (31-92)||(2931391-2931454)
chr4 (31-91)||(4433354-4433416)
chr4 (31-91)||(9195835-9195896)
chr4 (31-91)||(13397846-13397908)
chr4 (31-91)||(15058989-15059051)
chr4 (31-91)||(41877197-41877259)
chr4 (31-91)||(43793802-43793864)
chr4 (105-163)||(9397437-9397495)
chr4 (31-91)||(5304518-5304579)
chr4 (103-164)||(10471431-10471492)
chr4 (31-91)||(13826590-13826651)
chr4 (31-91)||(27018286-27018347)
chr4 (31-79)||(1588584-1588631)
chr4 (38-91)||(25011806-25011861)
chr4 (26-82)||(48158678-48158734)
chr4 (105-161)||(55780387-55780443)
chr4 (105-161)||(55844567-55844623)
chr4 (7-91)||(6209389-6209474)
chr4 (11-82)||(9397273-9397344)
chr4 (105-163)||(1964486-1964544)
chr4 (105-167)||(2715963-2716025)
chr4 (104-142)||(10758741-10758779)
chr4 (105-163)||(13394534-13394592)
chr4 (105-163)||(13397673-13397731)
chr4 (105-161)||(1961172-1961228)
chr4 (105-161)||(1963196-1963252)
chr4 (105-161)||(3928903-3928959)
chr4 (31-79)||(19232515-19232563)
chr4 (31-91)||(23362504-23362564)
chr4 (105-161)||(43793631-43793687)
chr4 (11-79)||(45633522-45633589)
chr4 (118-161)||(6209227-6209270)
chr4 (103-142)||(37831611-37831650)
chr4 (31-91)||(55780458-55780519)
chr4 (31-91)||(55844638-55844699)
chr4 (107-161)||(3927666-3927720)
chr4 (114-148)||(13826280-13826314)
chr4 (108-158)||(24175936-24175986)
chr4 (103-161)||(48780248-48780306)
chr4 (113-163)||(50909726-50909776)
chr4 (31-76)||(4357340-4357385)
chr4 (50-91)||(14804423-14804464)
chr4 (108-164)||(4433433-4433488)
chr4 (105-161)||(13826420-13826476)
chr4 (103-159)||(19750618-19750673)
chr4 (103-159)||(19789133-19789188)
chr4 (105-161)||(35475291-35475347)
chr4 (104-156)||(48158800-48158852)
[»] scaffold0002 (2 HSPs)
scaffold0002 (8-161)||(454929-455086)
scaffold0002 (8-83)||(455107-455182)
[»] chr1 (54 HSPs)
chr1 (7-166)||(21185203-21185360)
chr1 (21-158)||(21147980-21148121)
chr1 (3-163)||(29182144-29182304)
chr1 (7-160)||(2260526-2260677)
chr1 (7-91)||(18606831-18606917)
chr1 (7-81)||(16971933-16972007)
chr1 (7-145)||(4455190-4455332)
chr1 (7-83)||(9387773-9387850)
chr1 (7-91)||(16551791-16551877)
chr1 (31-163)||(46432387-46432522)
chr1 (7-83)||(22786111-22786186)
chr1 (105-161)||(35067047-35067103)
chr1 (31-91)||(24749869-24749931)
chr1 (7-163)||(10684792-10684950)
chr1 (31-91)||(19078096-19078157)
chr1 (31-91)||(19125986-19126047)
chr1 (105-162)||(51684365-51684422)
chr1 (31-91)||(24962024-24962086)
chr1 (31-91)||(43706825-43706886)
chr1 (112-161)||(11190385-11190434)
chr1 (105-161)||(14601740-14601796)
chr1 (106-162)||(28637106-28637162)
chr1 (31-91)||(24196332-24196394)
chr1 (103-170)||(36613947-36614014)
chr1 (31-91)||(51719292-51719354)
chr1 (112-162)||(2260377-2260427)
chr1 (105-167)||(28552299-28552361)
chr1 (105-163)||(29181999-29182057)
chr1 (31-91)||(2425296-2425356)
chr1 (22-75)||(34500409-34500462)
chr1 (11-79)||(2657664-2657731)
chr1 (31-79)||(3616884-3616932)
chr1 (105-161)||(4059522-4059578)
chr1 (31-79)||(4059693-4059741)
chr1 (113-161)||(12390034-12390082)
chr1 (105-161)||(16972098-16972154)
chr1 (31-87)||(47685178-47685234)
chr1 (31-79)||(48472034-48472082)
chr1 (105-163)||(21946642-21946700)
chr1 (106-153)||(31426161-31426208)
chr1 (113-163)||(2940264-2940313)
chr1 (103-161)||(39698563-39698621)
chr1 (41-91)||(28920832-28920884)
chr1 (112-161)||(36612853-36612902)
chr1 (105-158)||(39151934-39151987)
chr1 (105-142)||(51945541-51945578)
chr1 (104-148)||(6606956-6607000)
chr1 (105-161)||(21945708-21945763)
chr1 (105-161)||(24196509-24196565)
chr1 (105-161)||(28920899-28920955)
chr1 (103-163)||(45148579-45148639)
chr1 (105-161)||(46432216-46432272)
chr1 (111-167)||(50681655-50681711)
chr1 (109-161)||(51685814-51685866)
[»] chr7 (72 HSPs)
chr7 (7-91)||(4571491-4571575)
chr7 (7-161)||(5111442-5111595)
chr7 (7-88)||(24464651-24464732)
chr7 (22-167)||(3403214-3403360)
chr7 (7-91)||(39182008-39182090)
chr7 (3-91)||(25002780-25002867)
chr7 (7-91)||(19493392-19493475)
chr7 (21-161)||(15681595-15681740)
chr7 (7-82)||(26126336-26126410)
chr7 (7-90)||(43251338-43251421)
chr7 (7-91)||(9157198-9157281)
chr7 (11-91)||(2331084-2331165)
chr7 (21-91)||(33237575-33237645)
chr7 (31-91)||(3562604-3562665)
chr7 (31-170)||(42271324-42271465)
chr7 (105-161)||(9822314-9822370)
chr7 (105-161)||(10724239-10724295)
chr7 (12-91)||(13577939-13578017)
chr7 (31-79)||(18754437-18754485)
chr7 (104-156)||(47113373-47113425)
chr7 (29-80)||(6798083-6798134)
chr7 (31-91)||(20636690-20636752)
chr7 (31-91)||(20638562-20638624)
chr7 (31-91)||(21224523-21224585)
chr7 (7-91)||(26385332-26385417)
chr7 (31-91)||(27869366-27869428)
chr7 (31-91)||(35337693-35337755)
chr7 (11-77)||(4193637-4193702)
chr7 (23-81)||(15093912-15093970)
chr7 (31-91)||(17305836-17305897)
chr7 (31-91)||(31493982-31494043)
chr7 (11-91)||(14624676-14624754)
chr7 (31-79)||(21225719-21225766)
chr7 (31-79)||(24597686-24597734)
chr7 (31-79)||(48176134-48176181)
chr7 (31-91)||(19195384-19195446)
chr7 (106-148)||(5490517-5490559)
chr7 (11-73)||(15681720-15681782)
chr7 (105-158)||(19493564-19493617)
chr7 (31-80)||(44078042-44078091)
chr7 (103-148)||(46265878-46265923)
chr7 (15-83)||(3148004-3148072)
chr7 (7-91)||(7365292-7365379)
chr7 (31-79)||(11843349-11843396)
chr7 (31-79)||(36746674-36746722)
chr7 (56-91)||(1921004-1921039)
chr7 (111-158)||(4193556-4193603)
chr7 (7-54)||(9822247-9822294)
chr7 (32-79)||(10023956-10024003)
chr7 (32-79)||(10655415-10655462)
chr7 (7-54)||(10724172-10724219)
chr7 (105-172)||(31494158-31494225)
chr7 (31-91)||(41452420-41452482)
chr7 (103-161)||(3227637-3227695)
chr7 (110-148)||(4436132-4436170)
chr7 (104-134)||(9477447-9477477)
chr7 (7-49)||(42303261-42303303)
chr7 (50-91)||(6650614-6650655)
chr7 (106-151)||(7313081-7313126)
chr7 (31-91)||(19919774-19919834)
chr7 (105-158)||(23373669-23373722)
chr7 (31-72)||(24448215-24448256)
chr7 (113-154)||(29051634-29051675)
chr7 (22-67)||(39440283-39440328)
chr7 (9-73)||(6798032-6798095)
chr7 (31-79)||(8526881-8526929)
chr7 (105-161)||(8527042-8527098)
chr7 (105-137)||(20636643-20636675)
chr7 (105-161)||(20636866-20636922)
chr7 (105-137)||(20638515-20638547)
chr7 (105-161)||(27869196-27869252)
chr7 (105-161)||(42271580-42271636)
[»] chr2 (44 HSPs)
chr2 (7-161)||(26829237-26829389)
chr2 (7-91)||(36464345-36464429)
chr2 (7-161)||(28365512-28365666)
chr2 (31-91)||(4587932-4587994)
chr2 (7-91)||(25884325-25884410)
chr2 (31-91)||(2986757-2986819)
chr2 (31-91)||(11175978-11176040)
chr2 (31-89)||(15700820-15700880)
chr2 (22-91)||(331783-331854)
chr2 (31-79)||(9051198-9051246)
chr2 (105-161)||(15700747-15700803)
chr2 (105-161)||(30714275-30714331)
chr2 (31-161)||(38716194-38716326)
chr2 (22-91)||(43301726-43301796)
chr2 (31-91)||(6763888-6763950)
chr2 (31-91)||(15735135-15735197)
chr2 (31-91)||(18537999-18538061)
chr2 (31-91)||(22191117-22191179)
chr2 (31-91)||(25298972-25299034)
chr2 (31-91)||(30714445-30714507)
chr2 (111-161)||(32677816-32677866)
chr2 (103-161)||(36449778-36449836)
chr2 (104-161)||(23048290-23048347)
chr2 (31-91)||(2190606-2190665)
chr2 (31-79)||(9787644-9787692)
chr2 (105-161)||(25884178-25884234)
chr2 (108-147)||(5819761-5819800)
chr2 (105-164)||(25298798-25298857)
chr2 (162-224)||(28543164-28543227)
chr2 (103-161)||(7899925-7899983)
chr2 (113-163)||(9051026-9051076)
chr2 (112-158)||(12350026-12350072)
chr2 (22-76)||(12350101-12350154)
chr2 (105-163)||(13830265-13830322)
chr2 (113-159)||(36464278-36464324)
chr2 (103-161)||(38840536-38840594)
chr2 (108-161)||(2190782-2190835)
chr2 (31-80)||(22387239-22387288)
chr2 (116-153)||(34257117-34257154)
chr2 (104-161)||(38839242-38839299)
chr2 (105-161)||(1034514-1034570)
chr2 (105-161)||(2986934-2986990)
chr2 (56-91)||(15147816-15147852)
chr2 (105-137)||(30793869-30793901)
[»] scaffold0291 (1 HSPs)
scaffold0291 (7-161)||(9923-10077)
[»] chr6 (52 HSPs)
chr6 (9-161)||(26239957-26240111)
chr6 (7-91)||(4013814-4013899)
chr6 (21-161)||(16415492-16415634)
chr6 (11-91)||(4370969-4371050)
chr6 (31-91)||(18791428-18791490)
chr6 (31-91)||(22968325-22968387)
chr6 (31-91)||(23820006-23820068)
chr6 (7-75)||(9241742-9241808)
chr6 (7-60)||(12291565-12291618)
chr6 (21-91)||(18749289-18749361)
chr6 (31-91)||(32682449-32682510)
chr6 (31-79)||(3118764-3118812)
chr6 (31-91)||(24603432-24603494)
chr6 (31-91)||(34833996-34834058)
chr6 (29-91)||(2058991-2059055)
chr6 (31-91)||(14572349-14572410)
chr6 (31-79)||(4597576-4597624)
chr6 (11-91)||(8149061-8149140)
chr6 (31-79)||(8412843-8412891)
chr6 (11-83)||(12427312-12427384)
chr6 (105-161)||(27437828-27437884)
chr6 (109-161)||(27447962-27448014)
chr6 (31-79)||(35102662-35102710)
chr6 (31-91)||(15298556-15298618)
chr6 (31-91)||(31210865-31210927)
chr6 (104-154)||(20863734-20863784)
chr6 (50-161)||(23124879-23124990)
chr6 (32-91)||(24051079-24051140)
chr6 (104-161)||(7316338-7316395)
chr6 (31-91)||(22269479-22269539)
chr6 (108-161)||(22968404-22968457)
chr6 (108-161)||(23819936-23819989)
chr6 (31-91)||(25819756-25819817)
chr6 (122-158)||(5658759-5658795)
chr6 (105-161)||(6842328-6842384)
chr6 (104-156)||(14195805-14195857)
chr6 (105-161)||(18749097-18749153)
chr6 (31-91)||(24615865-24615924)
chr6 (31-79)||(26710478-26710526)
chr6 (112-156)||(29473082-29473126)
chr6 (109-153)||(31329846-31329890)
chr6 (114-161)||(3333581-3333628)
chr6 (31-91)||(32451797-32451859)
chr6 (108-142)||(6840211-6840245)
chr6 (103-161)||(14822360-14822418)
chr6 (105-161)||(18791605-18791662)
chr6 (105-161)||(2059068-2059124)
chr6 (105-137)||(3333071-3333103)
chr6 (105-161)||(8412758-8412814)
chr6 (24-91)||(14195631-14195699)
chr6 (113-161)||(34834180-34834228)
chr6 (105-161)||(35102491-35102547)
[»] scaffold0174 (1 HSPs)
scaffold0174 (7-91)||(29789-29872)
[»] chr8 (60 HSPs)
chr8 (7-91)||(1824678-1824761)
chr8 (7-91)||(1859123-1859206)
chr8 (1-163)||(4423171-4423336)
chr8 (7-92)||(18253034-18253118)
chr8 (9-161)||(3207983-3208134)
chr8 (31-91)||(21929974-21930035)
chr8 (31-83)||(21666445-21666497)
chr8 (31-91)||(17648314-17648376)
chr8 (31-91)||(19391558-19391620)
chr8 (31-91)||(30784435-30784497)
chr8 (105-162)||(36249551-36249608)
chr8 (31-91)||(44147043-44147104)
chr8 (31-161)||(3380199-3380331)
chr8 (31-79)||(5192442-5192490)
chr8 (11-91)||(7117266-7117346)
chr8 (103-167)||(10007806-10007870)
chr8 (104-152)||(19499432-19499480)
chr8 (11-83)||(31268360-31268430)
chr8 (31-79)||(33895459-33895507)
chr8 (31-79)||(38630140-38630188)
chr8 (108-163)||(3819487-3819541)
chr8 (31-91)||(4519038-4519100)
chr8 (31-91)||(32400493-32400555)
chr8 (7-82)||(41688258-41688333)
chr8 (33-79)||(8802572-8802618)
chr8 (106-164)||(34602011-34602069)
chr8 (105-158)||(11282011-11282064)
chr8 (31-76)||(22452344-22452389)
chr8 (22-75)||(39910233-39910286)
chr8 (105-161)||(8802400-8802456)
chr8 (31-79)||(12723432-12723480)
chr8 (11-91)||(18881655-18881734)
chr8 (105-161)||(21929847-21929903)
chr8 (107-163)||(38974793-38974849)
chr8 (107-163)||(39005891-39005947)
chr8 (21-92)||(15869500-15869569)
chr8 (31-91)||(19924336-19924398)
chr8 (106-153)||(27453134-27453181)
chr8 (103-158)||(29968380-29968434)
chr8 (108-159)||(30927676-30927727)
chr8 (106-161)||(42982703-42982758)
chr8 (104-142)||(2373286-2373324)
chr8 (103-161)||(12351921-12351979)
chr8 (103-161)||(12353403-12353460)
chr8 (104-138)||(16233714-16233748)
chr8 (111-161)||(30335639-30335689)
chr8 (107-161)||(32968456-32968510)
chr8 (107-161)||(38980091-38980145)
chr8 (107-161)||(39011188-39011242)
chr8 (31-91)||(4807771-4807834)
chr8 (103-164)||(10006341-10006402)
chr8 (104-153)||(14170430-14170479)
chr8 (104-153)||(29435088-29435137)
chr8 (105-161)||(4518869-4518925)
chr8 (105-161)||(7117361-7117417)
chr8 (105-161)||(11283254-11283310)
chr8 (105-161)||(11456638-11456694)
chr8 (105-141)||(18881524-18881560)
chr8 (107-163)||(32973983-32974039)
chr8 (105-161)||(44147218-44147274)
[»] scaffold0267 (1 HSPs)
scaffold0267 (31-91)||(3739-3799)
[»] chr3 (73 HSPs)
chr3 (11-91)||(3780952-3781030)
chr3 (105-167)||(46719935-46719997)
chr3 (7-91)||(36311223-36311307)
chr3 (31-161)||(40836350-40836482)
chr3 (31-148)||(10743422-10743540)
chr3 (27-91)||(20001780-20001846)
chr3 (7-148)||(23320380-23320517)
chr3 (21-91)||(49657942-49658011)
chr3 (7-165)||(25336354-25336512)
chr3 (7-91)||(32314992-32315076)
chr3 (31-91)||(23428790-23428852)
chr3 (31-91)||(25022834-25022896)
chr3 (31-162)||(46673218-46673351)
chr3 (31-91)||(9496388-9496448)
chr3 (31-79)||(28173900-28173948)
chr3 (109-161)||(31039241-31039293)
chr3 (22-78)||(33279747-33279803)
chr3 (31-91)||(4522025-4522087)
chr3 (9-91)||(4775922-4776005)
chr3 (31-91)||(8542681-8542743)
chr3 (31-91)||(13080965-13081027)
chr3 (31-91)||(26628196-26628258)
chr3 (31-91)||(27852922-27852984)
chr3 (31-91)||(48907463-48907525)
chr3 (7-79)||(1743334-1743405)
chr3 (51-91)||(3820986-3821026)
chr3 (31-79)||(22447915-22447963)
chr3 (31-91)||(26127077-26127137)
chr3 (31-91)||(26177127-26177187)
chr3 (31-91)||(26633530-26633589)
chr3 (31-79)||(28155053-28155101)
chr3 (31-79)||(30155316-30155364)
chr3 (31-91)||(3328984-3329046)
chr3 (31-91)||(22500766-22500828)
chr3 (107-161)||(28263158-28263212)
chr3 (31-77)||(34878700-34878746)
chr3 (7-80)||(35201143-35201214)
chr3 (30-91)||(46387744-46387806)
chr3 (103-161)||(47615591-47615649)
chr3 (11-91)||(22416403-22416486)
chr3 (11-76)||(34296531-34296596)
chr3 (105-161)||(8542858-8542914)
chr3 (105-161)||(19984849-19984905)
chr3 (105-161)||(40630627-40630683)
chr3 (105-161)||(46721265-46721321)
chr3 (105-161)||(51038835-51038891)
chr3 (105-164)||(8338937-8338996)
chr3 (31-91)||(25179649-25179711)
chr3 (106-153)||(44457445-44457492)
chr3 (105-168)||(50296199-50296262)
chr3 (26-91)||(18388866-18388932)
chr3 (9-79)||(31039127-31039196)
chr3 (123-161)||(34319346-34319384)
chr3 (38-91)||(43668511-43668565)
chr3 (103-165)||(51469968-51470030)
chr3 (117-162)||(784995-785040)
chr3 (108-173)||(4776069-4776134)
chr3 (109-158)||(8313882-8313931)
chr3 (108-161)||(8875906-8875959)
chr3 (108-161)||(19986120-19986173)
chr3 (105-138)||(25310322-25310355)
chr3 (108-161)||(36311152-36311205)
chr3 (31-93)||(48860771-48860835)
chr3 (105-161)||(1743497-1743553)
chr3 (105-137)||(4521978-4522010)
chr3 (105-161)||(20001956-20002011)
chr3 (104-156)||(21698443-21698495)
chr3 (105-137)||(25179602-25179634)
chr3 (108-140)||(26126926-26126958)
chr3 (105-161)||(26628273-26628329)
chr3 (105-161)||(26633361-26633416)
chr3 (105-161)||(28173729-28173785)
chr3 (105-141)||(28173977-28174013)
[»] scaffold0014 (1 HSPs)
scaffold0014 (7-148)||(112140-112283)
[»] scaffold0087 (1 HSPs)
scaffold0087 (31-92)||(25135-25198)
[»] scaffold0024 (1 HSPs)
scaffold0024 (7-91)||(43972-44055)
[»] scaffold0025 (4 HSPs)
scaffold0025 (31-91)||(19355-19415)
scaffold0025 (31-91)||(61885-61947)
scaffold0025 (105-161)||(19529-19585)
scaffold0025 (108-161)||(62069-62122)
[»] scaffold0001 (1 HSPs)
scaffold0001 (31-91)||(142118-142179)
[»] scaffold1202 (1 HSPs)
scaffold1202 (31-91)||(1945-2007)
[»] scaffold0179 (1 HSPs)
scaffold0179 (31-91)||(5820-5882)
[»] scaffold0062 (4 HSPs)
scaffold0062 (31-89)||(49732-49792)
scaffold0062 (31-89)||(62271-62331)
scaffold0062 (105-161)||(49659-49715)
scaffold0062 (105-161)||(62198-62254)
[»] scaffold1875 (2 HSPs)
scaffold1875 (105-161)||(756-812)
scaffold1875 (11-91)||(908-989)
[»] scaffold0419 (2 HSPs)
scaffold0419 (31-79)||(3131-3179)
scaffold0419 (105-163)||(2959-3017)
[»] scaffold0003 (2 HSPs)
scaffold0003 (109-161)||(39344-39396)
scaffold0003 (105-161)||(49478-49534)
[»] scaffold0607 (2 HSPs)
scaffold0607 (31-91)||(2220-2282)
scaffold0607 (105-161)||(2048-2104)
[»] scaffold0320 (1 HSPs)
scaffold0320 (103-161)||(19488-19546)
[»] scaffold0302 (1 HSPs)
scaffold0302 (103-161)||(17470-17528)
[»] scaffold0690 (1 HSPs)
scaffold0690 (105-141)||(4302-4338)
[»] scaffold0227 (1 HSPs)
scaffold0227 (107-163)||(166-222)
[»] scaffold0171 (1 HSPs)
scaffold0171 (108-148)||(9101-9141)
[»] scaffold0007 (1 HSPs)
scaffold0007 (105-163)||(250516-250574)
[»] scaffold2034 (1 HSPs)
scaffold2034 (105-162)||(232-289)
[»] scaffold0586 (1 HSPs)
scaffold0586 (105-158)||(6346-6399)
[»] scaffold0150 (2 HSPs)
scaffold0150 (31-79)||(5916-5965)
scaffold0150 (105-161)||(6078-6134)
[»] scaffold0005 (1 HSPs)
scaffold0005 (50-91)||(35263-35304)
[»] scaffold0406 (1 HSPs)
scaffold0406 (35-75)||(2080-2120)
[»] scaffold0060 (1 HSPs)
scaffold0060 (31-79)||(66259-66307)


Alignment Details
Target: chr5 (Bit Score: 172; Significance: 1e-92; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 41663665 - 41663893
Alignment:
Q  1 attttatgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnn 100  Q
    ||||| |||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||         
T  41663665 attttttgagaaaataaagagtcaaaaaatcatatttcccttatgttatggggtcaaaagagcatatttccctaaacatggggtcacttttgtaattttt 41663764  T
Q  101 nn-cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaaactttggaaggaaccaacttgtgttatac 199  Q
       |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41663765 tttcttagggggccaaaatcgcaactttttaaaacttaaagggtgaaaaatgcactttagccaataaagaaactttggaaggaaccaacttgtgttatac 41663864  T
Q  200 atttgtgttgcaccatttgccacaggttc 228  Q
    ||||||||||||||||||||||| |||||    
T  41663865 atttgtgttgcaccatttgccacgggttc 41663893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 38476617 - 38476781
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttta--------taan 96  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||         |       
T  38476617 tgagaagataaggggtcaaaagatcatatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttttgtcttttttttt 38476716  T
Q  97 nnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
          | ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  38476717 ttttttcatagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 38476781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 23040200 - 23040340
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggtt-aaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatc 119  Q
    |||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||| |           || |||| |||||||    
T  23040200 gtcaaaaggtcatatttcccttatgttaggggggtcaaaagagcatatttccctaaatatggggtcacttttgtctttttttttata-ggggtcaaaatc 23040298  T
Q  120 gcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||||| |||||| || |||||||||    
T  23040299 gcaactttttaaaacttaagggatgaaaagtgtactttagcc 23040340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 23040096 - 23040181
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatgg--ggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||| |||||||||||    
T  23040096 tgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtcaaaagagcatatttccctaaacat-gggtcactttt 23040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 156
Target Start/End: Original strand, 17825649 - 17825793
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagg 108  Q
    ||||||||| ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||  || ||||| ||| | |       |  ||     
T  17825649 aagataaagggtcaaaagaacatatttctcttatgtta-ggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtcatttttttc--aga 17825745  T
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 156  Q
    ||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  17825746 gggccaaaatcgcaactttttaaaacttatgggatgaaaagtgcactt 17825793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 31576607 - 31576663
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31576607 tagggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagcc 31576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 163
Target Start/End: Original strand, 35302079 - 35302219
Alignment:
Q  24 aaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttataannnnnnncttagggggccaaaatcgca 122  Q
    |||||||||||||| | |||||||| ||||| ||||||||||||||||||||| || ||||||||||||   |         ||| ||| ||||||||||    
T  35302079 aaaagatcatatttacattatgttagggggtcaaaagagcatatttccctaaatatgggggtcacttttgccatttttataatagagggtcaaaatcgca 35302178  T
Q  123 actttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    || |||| |||||||||||| |||||||||| |||||||||    
T  35302179 acattttgaaacttaaggggagaaaaatgcagtttagccaa 35302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 159
Target Start/End: Complemental strand, 2373301 - 2373149
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnnct 104  Q
    |||||| |||| | |||| || |||||||||||||||||||||||| | |||||||||||||| | |||||||  |||||||| ||| |         |     
T  2373301 tgagaaaataaggggtcataatatcatatttcccttatgttatggg-tcaaaagagcatattttcttaaacatagggggtcacgtttgtc-tttttttca 2373204  T
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 159  Q
    || ||||| ||||||||||||||||||||||||||||||||||| ||||||||||    
T  2373203 tatggggctaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttag 2373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 34125216 - 34125128
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcacttttat 93  Q
    |||||||||||   |||||| |||||||||| |||||||||| ||| | |||||||||||||||||||||||||  |||||||||||||    
T  34125216 tgagaagataagaggtcaaatgatcatattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcacttttat 34125128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 24 - 161
Target Start/End: Complemental strand, 20653959 - 20653820
Alignment:
Q  24 aaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg--ggtcacttttataannnnnnn-cttagggggccaaaatcg 120  Q
    ||||| ||||||||| ||||||||| ||||| |||||||||||||||||||||||||   |||||||||| | |        | || |||| ||||||||    
T  20653959 aaaagttcatatttcacttatgtta-ggggtcaaaagagcatatttccctaaacatgaaaggtcacttttgtcattttttttcataaggggtcaaaatcg 20653861  T
Q  121 caactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||||| | |||||| ||||||||||||    
T  20653860 caactttttaaaacttaagagatgaaaagtgcactttagcc 20653820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 37961396 - 37961472
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    ||||||| ||| | ||||||||||||| |||||||||||||| | ||| |||||||| |||||||||||||||||||    
T  37961396 tgagaagttaaggggtcaaaagatcatttttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggg 37961472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 23765561 - 23765624
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttat 93  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||    
T  23765561 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttat 23765624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 23815409 - 23815472
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttat 93  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||||    
T  23815409 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcacttttat 23815472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 25557046 - 25557108
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  25557046 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25557108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 31055485 - 31055547
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  31055485 catatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcactttt 31055547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 245727 - 245666
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  245727 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 245666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 16901168 - 16901229
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  16901168 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 16901229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 18695136 - 18695075
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  18695136 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 18695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 26639208 - 26639270
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  26639208 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcactttt 26639270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 8645932 - 8645882
Alignment:
Q  29 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8645932 atcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 8645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 7187322 - 7187262
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||||||||||  |||| ||||||  ||||||||||||||||||||||| ||||    
T  7187322 catatttcccttatgttagagggtcaaaagaatatatttccctaaacatggggtcaatttt 7187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 10293239 - 10293306
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| ||||||||| | |||||||||||||||||| | ||| ||||||||||||||||| ||||||    
T  10293239 aagataaggagtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttcccaaaacat 10293306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 16307628 - 16307710
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggtt-aaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| ||||||||| | ||||||| |||||||||| |||| | ||||||||||||||||||||||||  ||||||||||||    
T  16307628 aagataaggagtcaaaaaa-catattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcactttt 16307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 22940665 - 22940725
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||||    
T  22940665 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaa 22940725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Original strand, 17704739 - 17704808
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggg 82  Q
    ||||||||| |||||||  | ||||||||||||||||||||| | |||||||||||||| ||||||||||||    
T  17704739 aagataaagggtcaaaaagt-atatttcccttatgttatggg-tcaaaagagcatattttcctaaacatggg 17704808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 15885178 - 15885132
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 159  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||    
T  15885178 caaaatcgcaactttttgaaacttaaggggtgaaaagtgcaatttag 15885132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 38834135 - 38834085
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||| ||||    
T  38834135 caaaatcgcaactttttaaaagttaaggggaaaaaaatgcactttaaccaa 38834085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 2373393 - 2373449
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||| |||||||||||||||||||| ||||||| ||| |||||| |||| |||||||    
T  2373393 taggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcc 2373449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 7835842 - 7835795
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  7835842 catattttccttatgttatggg-tcaaaagagcatatttccctaaacat 7835795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 8646002 - 8646050
Alignment:
Q  110 ggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||||||||    
T  8646002 ggccaaaatcgcaacattttaaaacataaggggcgaaaagtgcacttta 8646050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 10379414 - 10379367
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  10379414 catatttcccttatgtta-ggggtcaaaagagcatattttcctaaacat 10379367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 36641276 - 36641228
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  36641276 catatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 36641228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 10452756 - 10452709
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||| ||||    
T  10452756 agggggccaaaatcgtaacttttcaaaacataaggggtgaaaagtgca 10452709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 10453121 - 10453168
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    ||||||||||||||| ||||||||||||| ||| || |||||||||||    
T  10453121 agggggccaaaatcgtaactttttaaaacataaaggatgaaaaatgca 10453168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 38408761 - 38408700
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||||||||  ||||||||||||    
T  38408761 catatttcccttatgtta-gtggtcaaaagagcatatttctctaaacatagggggtcactttt 38408700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 40428810 - 40428857
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaaca 78  Q
    |||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  40428810 catatttcccttatgttaggaggtcaaaagaacatatttccctaaaca 40428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 4800981 - 4800935
Alignment:
Q  114 aaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagc 160  Q
    ||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  4800981 aaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagc 4800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 16650898 - 16650956
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||| |||||| |||| ||||||||| |||||||  ||||| ||||||||||||    
T  16650898 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 18486945 - 18487003
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||| ||||| ||| |||||||| | ||| ||||||||||||    
T  18486945 cttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcc 18487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 25523127 - 25523069
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||| ||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  25523127 cttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 25523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 33160329 - 33160387
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||| ||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  33160329 cttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 40255716 - 40255773
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| |||||| |||| ||||||||| ||||| || ||||| ||||||||||||    
T  40255716 ttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcc 40255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 42195188 - 42195137
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||    
T  42195188 tagggggccaaaatcgcaacttttt-aaagttaagggg-gaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 15885335 - 15885383
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||| |||||||| |||||||    
T  15885335 catatttcccttatgttaagaggtcaaaagagaatatttccataaacat 15885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 18695250 - 18695306
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||  |||| |||| || |||| ||||| ||||||||||||    
T  18695250 tagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcc 18695306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 19169476 - 19169428
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||| |||||||||| |||||||||    
T  19169476 catatttcccttatgttaagaggtcaaatgagcatattttcctaaacat 19169428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 24025077 - 24025021
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||  |||| ||||||| |||| ||| | ||||||||||||    
T  24025077 tagggggccaaaatcgcaatattttgaaacttagggggcgaatagtgcactttagcc 24025021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 7e-33; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 51291317 - 51291473
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttat-aannnnnnnctt 105  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||||| | |        | |    
T  51291317 tgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatgaggtcacttttgtcattttctttcat 51291416  T
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
      ||||||||||| ||||||||||||||||||||||||||||| || ||||||||||    
T  51291417 taggggccaaaattgcaactttttaaaacttaaggggtgaaaattggactttagcca 51291473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 4098813 - 4098657
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnnct 104  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||  |||||||||||| |               
T  4098813 tgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttcccaaaacatagggggtcacttttgtcgtttttttaa 4098714  T
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| ||||||| ||| ||||||||||||||| |||||||| ||||||||||||    
T  4098713 tagggggtcaaaatcacaattttttaaaacttaagaggtgaaaagtgcactttagcc 4098657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 24626368 - 24626438
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac 77  Q
    ||||||||||| ||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||    
T  24626368 tgagaagataaggagtcaaaagatcatatttcccttatgttattgagtcaaaagagcatatttccctaaac 24626438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 20919481 - 20919632
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    ||||||||||| | |||  |||||||||||| ||| || |||| |||| |||||||||||||||||||||||| || |||||||| | |       | ||    
T  20919481 tgagaagataaggggtcctaagatcatattttcct-at-ttatagggtcaaaagagcatatttccctaaacattggatcacttttgtcatttttttcata 20919578  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    || | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20919579 ggagtc-aaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 20919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 159
Target Start/End: Original strand, 36729247 - 36729357
Alignment:
Q  50 ggggttaaaagagcatatttccctaaacatg-gggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    ||||| |||||| |||||||||||||||||| ||||||||||| | |       | ||||| | ||||||||||||||||||||||||||||||||||||    
T  36729247 ggggtcaaaagatcatatttccctaaacatgagggtcacttttgtcaattttttcatagggagtcaaaatcgcaactttttaaaacttaaggggtgaaaa 36729346  T
Q  149 atgcactttag 159  Q
    |||||||||||    
T  36729347 atgcactttag 36729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 35475422 - 35475362
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||    
T  35475422 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggtcactttt 35475362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 2931454 - 2931391
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttta 92  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||||  |||||||||||||    
T  2931454 catatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttta 2931391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 4433354 - 4433416
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  4433354 catattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 4433416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 9195835 - 9195896
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||    
T  9195835 catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcactttt 9195896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 13397846 - 13397908
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  13397846 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 13397908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 15058989 - 15059051
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  15058989 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 15059051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 41877197 - 41877259
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  41877197 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 41877259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 43793802 - 43793864
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  43793802 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcactttt 43793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 9397437 - 9397495
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||||||||||| |||| |||||||||||| |||||||||| |||| |||||||||    
T  9397437 tagggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagccaa 9397495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 5304518 - 5304579
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||| |||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  5304518 catattttccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 5304579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 164
Target Start/End: Original strand, 10471431 - 10471492
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 164  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| |||||||||||||||    
T  10471431 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaat 10471492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 13826590 - 13826651
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||| |||||| ||||||||||||    
T  13826590 catatttcccttatgttaggaggtcaaaagagcatatttcccgaaacataggggtcactttt 13826651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 27018347 - 27018286
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||| ||||| ||||| ||||||||||||||||||||||||  |||||||||||    
T  27018347 catatttcccttttgttagggggtcaaaagagcatatttccctaaacatatgggtcactttt 27018286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 1588584 - 1588631
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1588584 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 1588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 25011861 - 25011806
Alignment:
Q  38 cccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  25011861 cccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 48158734 - 48158678
Alignment:
Q  26 aagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggg 82  Q
    |||| ||||||||||||||||||  |||| |||||| ||||||||||||||||||||    
T  48158734 aagagcatatttcccttatgttagagggtcaaaagatcatatttccctaaacatggg 48158678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 55780443 - 55780387
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||    
T  55780443 tagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55780387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 55844623 - 55844567
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||    
T  55844623 tagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 6209389 - 6209474
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca--tggggtcactttt 91  Q
    ||||||||||| | |||| |||||||| |||||||||||||| ||||| ||||  ||||| |||||||||||  |||||||||||||    
T  6209389 tgagaagataaggggtcataagatcatttttcccttatgtta-ggggtcaaaaatgcataattccctaaacatgtggggtcactttt 6209474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 9397344 - 9397273
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggg 82  Q
    ||||||||| || |||| | ||||||||| ||||||||  |||| ||||||||||||||||||| |||||||    
T  9397344 aagataaagggttaaaaaaacatatttcctttatgttagagggtcaaaagagcatatttccctatacatggg 9397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 1964486 - 1964544
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||| | |||||||||||| |||||||  ||||| ||||||||||||||    
T  1964486 tagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagccaa 1964544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 2715963 - 2716025
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 167  Q
    |||||| ||||||||||||| |||||||| ||||| | |||||| |||| |||||||||||||    
T  2715963 taggggaccaaaatcgcaacattttaaaatttaagagatgaaaagtgcagtttagccaataaa 2716025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 142
Target Start/End: Original strand, 10758741 - 10758779
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaagggg 142  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10758741 ttagggggccaaaatcgcaactttttaaaagttaagggg 10758779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 13394592 - 13394534
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||| ||||||||||| ||||||||| || |||| ||||| ||||||||||||||    
T  13394592 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13394534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 13397731 - 13397673
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||| ||||||||||| ||||||||| || |||| ||||| ||||||||||||||    
T  13397731 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13397673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 1961172 - 1961228
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||||||||  ||||||| ||||| |||| ||||||||||||    
T  1961172 tagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcc 1961228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 1963252 - 1963196
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||| ||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  1963252 taggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 1963196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 3928903 - 3928959
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  3928903 tagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 3928959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 19232515 - 19232563
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| |||||||||| || || ||||||||||||||||||||||||    
T  19232515 catattttccttatgttagggagtcaaaagagcatatttccctaaacat 19232563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 23362564 - 23362504
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||| ||||||||||  |||| |||||| |||||||||||||| |||||||| |||||    
T  23362564 catattttccttatgttaaagggtcaaaagaacatatttccctaaatatggggtcgctttt 23362504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 43793687 - 43793631
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||||||||| || |||| ||||| |||| |||||||    
T  43793687 tagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 43793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 45633589 - 45633522
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| | ||||||||| ||||||||| |||||||| | ||| || |||||||||||||||||||||    
T  45633589 aagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacat 45633522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 6209270 - 6209227
Alignment:
Q  118 tcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||    
T  6209270 tcgcaactttttaaaacttatgggatgaaaaatacactttagcc 6209227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 142
Target Start/End: Complemental strand, 37831650 - 37831611
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaagggg 142  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  37831650 cttagggggccaaaatcgcaacttcttaaaacttaggggg 37831611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 55780519 - 55780458
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| ||||| |||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  55780519 catattttccttaggtta-ggggtcaaaagagcatatttccctaaacatagggggtcactttt 55780458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 55844699 - 55844638
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| ||||| |||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  55844699 catattttccttaggtta-ggggtcaaaagagcatatttccctaaacatagggggtcactttt 55844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 3927720 - 3927666
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||| |||||||| |||  ||| ||||| ||||||||||||    
T  3927720 gggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcc 3927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 148
Target Start/End: Original strand, 13826280 - 13826314
Alignment:
Q  114 aaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    |||||||||||||||||||||||||||||| ||||    
T  13826280 aaaatcgcaactttttaaaacttaaggggttaaaa 13826314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 24175986 - 24175936
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||    
T  24175986 gggggcaaaaccgcaacttttttaaacttagggggtaaaaaatgcacttta 24175936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 48780306 - 48780248
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||| |||||| |||| ||||||||| ||| |||| ||||| ||||||||||||    
T  48780306 cttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcc 48780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 50909726 - 50909776
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||||||||||||||||||||| || |  |||| ||||||||||||||    
T  50909726 caaaatcgcaactttttaaaacttagggtggaaaaagtgcactttagccaa 50909776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 76
Target Start/End: Complemental strand, 4357385 - 4357340
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaa 76  Q
    ||||||||||||||||||   ||| |||||||||||||||||||||    
T  4357385 catatttcccttatgttagaaggtcaaaagagcatatttccctaaa 4357340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 14804464 - 14804423
Alignment:
Q  50 ggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||    
T  14804464 ggggtcaaaagagtatatttccctaaacatgggatcactttt 14804423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 4433433 - 4433488
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 164  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| || | ||||||||||    
T  4433433 ggggccaaaatcgcaacattttaaaactt-aggggcgaaaagtgaagtttagccaat 4433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 13826476 - 13826420
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  13826476 tagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcc 13826420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Original strand, 19750618 - 19750673
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 159  Q
    |||||||||||||||| |||| ||||||||| || ||||| ||||| ||||||||||    
T  19750618 cttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 159
Target Start/End: Complemental strand, 19789188 - 19789133
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 159  Q
    |||||||||||||||| |||| ||||||||| || ||||| ||||| ||||||||||    
T  19789188 cttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 35475347 - 35475291
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||| |||||||||||||| ||||||||||||  ||| |||||||| | |||||||    
T  35475347 tagggagccaaaatcgcaacattttaaaacttagagggcgaaaaatgaagtttagcc 35475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 48158800 - 48158852
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 156  Q
    ||||||||||||||||| |||||||||||| |||| | ||  |||||||||||    
T  48158800 ttagggggccaaaatcgtaactttttaaaagttaatgtgtctaaaatgcactt 48158852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 455086 - 454929
Alignment:
Q  8 gagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataa--nnnnnnnc 103  Q
    |||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||  |||||||||||| | |         |    
T  455086 gagaagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggtcacttttgtcattttttttcc 454987  T
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
     ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  454986 atagggggccaaaatcacaactttttaaaacttaatgggtgaaaagtgcactttagcc 454929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 455182 - 455107
Alignment:
Q  8 gagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  455182 gagaagataaggggtcaaaagatcatatttcccttatgttagggggttaaaagaacatattttcctaaacatgggg 455107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 3e-32; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 166
Target Start/End: Complemental strand, 21185360 - 21185203
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    ||||||||||  | ||||||||||||||||| | |||||||| ||| | |||||| ||||||||||||||||||||||||||||||| |       | ||    
T  21185360 tgagaagatagggggtcaaaagatcatattttc-ttatgttaaggg-tcaaaagaacatatttccctaaacatggggtcacttttatcatttttttcata 21185263  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataa 166  Q
    || |||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  21185262 ggaggccaaaagcgcaactttttaaaacttaagggatgaaaaatgcactttagcctataa 21185203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 158
Target Start/End: Complemental strand, 21148121 - 21147980
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataa--nnnnnnncttagggggccaaa 116  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||| | |          | |||||||||||    
T  21148121 gtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttcataagggggccaaa 21148022  T
Q  117 atcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||||||||||| ||||||||||||||||| | |||||||||    
T  21148021 atcgcaacttttaaaaacttaaggggtgaatactgcacttta 21147980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 163
Target Start/End: Original strand, 29182144 - 29182304
Alignment:
Q  3 tttatgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnn 100  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||  |||||||||||| | |         
T  29182144 tttatgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaagagcatatttctctaaacataaggggtcacttttgtcattttt 29182242  T
Q  101 nncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
      | | |||| ||||||||| |||||||||||| ||||| |||||||| ||||||||| ||||    
T  29182243 ttcat-ggggaccaaaatcgtaactttttaaaatttaagaggtgaaaagtgcactttatccaa 29182304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 2260526 - 2260677
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    ||||||||||| | || |||| |||||||||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||| | |       | ||    
T  2260526 tgagaagataaggggttaaaatatcatatttcccttatattatggggtcaaaaaagcatatttcactaaacatggggtcacttttgtca-ttttttcata 2260624  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagc 160  Q
     |||  ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  2260625 -gggatcaaaatcgcaactttttaaaacttaagggatgaaaagtgcactttagc 2260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 18606831 - 18606917
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||||||| | ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  18606831 tgagaagataaggggtcaaaagatcgtattttccttatgttatggggtcaaaagagcatatttccctaaacatgaggggtcactttt 18606917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 16972007 - 16971933
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg 81  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||||||| |||||||||||||    
T  16972007 tgagaagataaagagtcaaaaggtcatatttcccttatgttagggggtctaaagagcatatatccctaaacatgg 16971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 4455190 - 4455332
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttat--aannnnnnn 102  Q
    |||||||||||   ||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||||||  ||| |||||||| |  |            
T  4455190 tgagaagataagtggtcaaaaaatcatatttcccttatgttacggggtcaaaagagcatattttcctaaacattggggatcacttttgtcaatttttttt 4455289  T
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtga 145  Q
    | ||| |||||||||||||||||||||||||||||||||||||    
T  4455290 catagagggccaaaatcgcaactttttaaaacttaaggggtga 4455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 9387850 - 9387773
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgtta-tggggttaaaagagcatatttccctaaacatgggg 83  Q
    ||||||||||||| |||||||||| |||||||||||||||||  ||||| |||||||||||||||| |||||||||||    
T  9387850 tgagaagataaagggtcaaaagattatatttcccttatgttaggggggtcaaaagagcatatttccttaaacatgggg 9387773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 16551791 - 16551877
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||||||| | |||||||||||||||||  || |||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  16551791 tgagaagataaggggtcaaaagatcatatttgtctgatgttagggggtcaaaagagcatatttccctaaacattgggggtcactttt 16551877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 163
Target Start/End: Original strand, 46432387 - 46432522
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt-ataannnnnnncttagggggccaaaatcgcaacttt 127  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||   |          |||||||||||||||||||| ||    
T  46432387 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaaatcgcaacatt 46432486  T
Q  128 ttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    || |||||||||||| ||||| || |||||||||||    
T  46432487 ttgaaacttaaggggcgaaaagtggactttagccaa 46432522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 22786186 - 22786111
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    ||||||||||| | |||||||||||||||||| ||||||||| |  || ||||||||||||||||||||||||||||    
T  22786186 tgagaagataaggggtcaaaagatcatatttcacttatgtta-gatgtcaaaagagcatatttccctaaacatgggg 22786111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 35067047 - 35067103
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  35067047 tagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcc 35067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24749931 - 24749869
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  24749931 catatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttt 24749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 163
Target Start/End: Complemental strand, 10684950 - 10684792
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgtta-tggggttaaaagagcatatttccctaaac-atggggtcacttttataannnnnnnct 104  Q
    ||||||||||| | |||||||||||||||||  |||||||||  ||||| || |||| |||||||||||||| ||||||||||||||   |             
T  10684950 tgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccctaaacaatggggtcacttttgccatttttttaa 10684851  T
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||| | ||||| ||||| ||||||||||||||||| ||||||| || |||||||||    
T  10684850 taggggactaaaattgcaacattttaaaacttaaggggcgaaaaatacagtttagccaa 10684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19078096 - 19078157
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  19078096 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 19078157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19125986 - 19126047
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  19125986 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 19126047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 51684422 - 51684365
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
    |||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||    
T  51684422 tagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcca 51684365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24962086 - 24962024
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  24962086 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 24962024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 43706825 - 43706886
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||  ||||||||||||    
T  43706825 catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatagggggtcactttt 43706886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 11190434 - 11190385
Alignment:
Q  112 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  11190434 ccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 14601740 - 14601796
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||||||    
T  14601740 tagggggtcaaaatcgcaacattttaaaacttagggggtgaaaaacgcagtttagcc 14601796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 28637162 - 28637106
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
    |||| |||||||||||||||||||||||| ||||||||||||| |||| || |||||    
T  28637162 agggagccaaaatcgcaactttttaaaacataaggggtgaaaagtgcatttaagcca 28637106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24196394 - 24196332
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||||||  ||||||||||||||    
T  24196394 catatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcactttt 24196332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 36613947 - 36614014
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaa 170  Q
    ||||||||||||||||  ||| ||||||||| ||| |||  |||||||||||||||||||||| ||||    
T  36613947 cttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagccaatatagaa 36614014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 51719292 - 51719354
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| |||||||||| ||| | ||||||||||||||||||||||||  ||||||||||||    
T  51719292 catattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcactttt 51719354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 112 - 162
Target Start/End: Complemental strand, 2260427 - 2260377
Alignment:
Q  112 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
    ||||||||||||| ||||||||||||||||  ||||| |||||||||||||    
T  2260427 ccaaaatcgcaacattttaaaacttaagggtcgaaaagtgcactttagcca 2260377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 28552361 - 28552299
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 167  Q
    |||||| ||||||||||||| |||| ||||||| |||| ||||| |||||||||| |||||||    
T  28552361 taggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtgcactttagtcaataaa 28552299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 29182057 - 29181999
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||||||||||  ||||||||| |||||||| ||||||||| | ||||||||||||    
T  29182057 tagggggccaaaattacaactttttgaaacttaaagggtgaaaagtacactttagccaa 29181999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 2425356 - 2425296
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||||||| ||||||||||||    
T  2425356 catatttcccttatgttagagggtcaaaagagcata-ttccctaaacataggggtcactttt 2425296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 34500462 - 34500409
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 75  Q
    ||||||||||||||||| || | ||||  |||||||||||||||||||||||||    
T  34500462 tcaaaagatcatatttcactaaagttagagggttaaaagagcatatttccctaa 34500409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 2657664 - 2657731
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| | ||||||||| ||||||||| |||||||| | ||| || |||||||||||||||||||||    
T  2657664 aagataaggggtcaaaagagcatatttcc-ttatgttaggcggtcaatagagcatatttccctaaacat 2657731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 3616932 - 3616884
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||| | | ||| ||||||||||||||||||||||||    
T  3616932 catatttcccttatgtgaagaggtcaaaagagcatatttccctaaacat 3616884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4059578 - 4059522
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  4059578 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 4059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 4059693 - 4059741
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||    
T  4059693 catattttccttatgttaggaggtcaaaagagcatatttccctaaacat 4059741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 12390034 - 12390082
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||| ||| |||||| | ||||||||||||||||||    
T  12390034 caaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 16972098 - 16972154
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| ||||||||||| |||||||||||| |||| ||||| |||| |||||||    
T  16972098 tagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcc 16972154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 47685234 - 47685178
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcac 87  Q
    ||||||| |||||||||| ||| | |||| ||||||||||| |||||||||||||||    
T  47685234 catattttccttatgttaggggatcaaaatagcatatttccttaaacatggggtcac 47685178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 48472034 - 48472082
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  48472034 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 48472082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 163
Target Start/End: Original strand, 21946642 - 21946700
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaa-tgcactttagccaa 163  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||| ||||||||||    
T  21946642 taggggaccaaaatcgcaacttttttaaacttaa-gggtgaaaaattgctctttagccaa 21946700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 31426161 - 31426208
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    ||||||| ||||||||||||||||||||| |||| |||||||| ||||    
T  31426161 agggggctaaaatcgcaactttttaaaacataagaggtgaaaagtgca 31426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 2940313 - 2940264
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  2940313 caaaatcacaacattttaaaacttaagggg-gaaaaatacactttagccaa 2940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 39698621 - 39698563
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| | || ||||||||| |||||||| | ||| ||||||||||||    
T  39698621 cttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 91
Target Start/End: Original strand, 28920832 - 28920884
Alignment:
Q  41 ttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  28920832 ttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 28920884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 161
Target Start/End: Complemental strand, 36612902 - 36612853
Alignment:
Q  112 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||| ||||| ||| |||||||| ||||||||||||||||||    
T  36612902 ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 39151987 - 39151934
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    ||||||||||||||  ||| ||||| ||||||||||||  ||||||||||||||    
T  39151987 tagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 51945578 - 51945541
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaagggg 142  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  51945578 tagggggccaaaatcccaactttttcaaacttaagggg 51945541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 148
Target Start/End: Original strand, 6606956 - 6607000
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    ||||||||||||||||||||||||| ||||  |||||||| ||||    
T  6606956 ttagggggccaaaatcgcaacttttgaaaaaataaggggtcaaaa 6607000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 21945763 - 21945708
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||| | ||||||||||    
T  21945763 taggaggccaaaattgcaactttttaaaacttaaaggg-gaaaagtacactttagcc 21945708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 24196509 - 24196565
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||||||||| || | || ||||| |||| |||||||    
T  24196509 tagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcc 24196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 28920899 - 28920955
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| ||||||| |||| ||||| || | |||||||    
T  28920899 tagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagcc 28920955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 45148639 - 45148579
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||| |||| ||||| ||| ||||| ||  |||| ||||||||||||||    
T  45148639 cttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagccaa 45148579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 46432272 - 46432216
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| || | |||| || |||| ||||| ||||||||||||    
T  46432272 tagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 46432216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 167
Target Start/End: Original strand, 50681655 - 50681711
Alignment:
Q  111 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 167  Q
    |||||||| |||| ||||| ||| ||||| || ||||| ||||||||||||||||||    
T  50681655 gccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagccaataaa 50681711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 51685814 - 51685866
Alignment:
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||||||| ||| |||  ||| ||||| ||||||||||||    
T  51685814 gggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcc 51685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 4571491 - 4571575
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  4571491 tgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacattgggtcactttt 4571575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 5111595 - 5111442
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    ||||||||||| | ||||||| |||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||||         |  |    
T  5111595 tgagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatattttcctaaacatggggtcacttttatcctttttttcaca 5111497  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    || |||||||||| ||| ||||| |||||||||||||||||| ||||||||||||    
T  5111496 ggaggccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcc 5111442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 24464732 - 24464651
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcact 88  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  24464732 tgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatggggtcact 24464651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 167
Target Start/End: Original strand, 3403214 - 3403360
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatc 119  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||  |||||||||||| | |         ||||||| |||||||    
T  3403214 tcaaaagatcatatttcccttatgttagggggtcaaaagagcatattttcctatacatgaggggtcacttttgtcattttttttatagggggtcaaaatc 3403313  T
Q  120 gcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 167  Q
    ||||| |||||||||||||| |||||||| ||| ||||||||||||||    
T  3403314 gcaac-ttttaaaacttaagaggtgaaaattgccctttagccaataaa 3403360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 39182090 - 39182008
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| | |||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||| ||||    
T  39182090 tgagaagataaggggtcaaaagatcatatttcccttatgttat--ggtcaaaagagcatatttccctaaacatggggtcattttt 39182008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 25002867 - 25002780
Alignment:
Q  3 tttatgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||||||| | ||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  25002867 tttatgagaagataaggggtcaaaagatcatatttcctttatgtta-ggggtcaaaagagcatgtttccctaaacatggggtcattttt 25002780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 19493475 - 19493392
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||||| ||||||| ||||||||| ||||||||| |||||| |||| ||||||||||| |||||||||||||||||||    
T  19493475 tgagaagataaagggtcaaaaaatcatattttccttatgtt-tggggtcaaaatagcatatttccataaacatggggtcactttt 19493392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 15681740 - 15681595
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnnct---tagggggccaa 115  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||  || ||||| ||| |         ||   |||||| ||||    
T  15681740 gtcaaaagatcatagttcccttatgttagggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtcttttttttcttcataggggaccaa 15681641  T
Q  116 aatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||    
T  15681640 aatcgcaactttttaaaacttaatgggtgaaaagttcactttagcc 15681595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 26126410 - 26126336
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggg 82  Q
    ||||||||||| | |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||    
T  26126410 tgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaaaagcatatttccctaaacatggg 26126336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 43251421 - 43251338
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||| ||||||| | |||| |||||||||| | |||||||    
T  43251421 tgagaagataaagagtcaaaagatcatatttcccttatgttagagggtcaaaagagtacattttcctaaacatgagatcacttt 43251338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 9157198 - 9157281
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||||   |||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||  ||||||||||    
T  9157198 tgagaagataagtggtcaaaagatcatatttcacttatgtta-ggggtcaaaagagcatattttcctaaacatttggtcactttt 9157281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 2331165 - 2331084
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| ||||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  2331165 aagataaggagtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 2331084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 33237575 - 33237645
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||| |||||||| ||||||| ||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  33237575 gtcaaaatatcatattacccttattttagggggtgaaaagagcatattgccctaaacatggggtgactttt 33237645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 3562604 - 3562665
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  3562604 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 3562665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 170
Target Start/End: Complemental strand, 42271465 - 42271324
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttt 128  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||   |         |||| ||||||||||||||| |||    
T  42271465 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataggaggccaaaatcgcaacattt 42271366  T
Q  129 taaaacttaaggggtgaaaaatgcactttagccaataaagaa 170  Q
    | |||||||  ||| |||||||| | ||||||||| ||||||    
T  42271365 tgaaacttagagggcgaaaaatgaaatttagccaaaaaagaa 42271324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 9822314 - 9822370
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  9822314 tagggtgctaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 9822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 10724239 - 10724295
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  10724239 tagggtgctaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 10724295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 13577939 - 13578017
Alignment:
Q  12 agataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||| ||||||| | |||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||    
T  13577939 agataaagggtcaaaa-agcatatttcccttatgtta-ggggtcaaaagagcatatttccttaaacataggggtcactttt 13578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 18754437 - 18754485
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18754437 catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 18754485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 47113373 - 47113425
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 156  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  47113373 ttagggggccaaaatcgcaactttttaaaagttaaggggtcacaaatgcactt 47113425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 6798083 - 6798134
Alignment:
Q  29 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg 80  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  6798083 atcatatttcccttatgttagagggtcaaaagagcatatttccctaaacatg 6798134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 20636752 - 20636690
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  20636752 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 20636690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 20638624 - 20638562
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  20638624 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 20638562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 21224523 - 21224585
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  21224523 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 21224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 26385417 - 26385332
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcactttt 91  Q
    |||||||||||   ||||||| |||||||||| ||||||||| ||||| |||| ||||||||||||||||||||  |||||||||||    
T  26385417 tgagaagataagaggtcaaaatatcatatttctcttatgtta-ggggtcaaaatagcatatttccctaaacatgatgggtcactttt 26385332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 27869366 - 27869428
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  27869366 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 27869428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 35337693 - 35337755
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  35337693 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 35337755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Complemental strand, 4193702 - 4193637
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac 77  Q
    ||||||| | |||||||||||||||||| |||||||||  |||| ||||||||||||||||||||||    
T  4193702 aagataaggggtcaaaagatcatatttctcttatgtta-agggtcaaaagagcatatttccctaaac 4193637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 81
Target Start/End: Original strand, 15093912 - 15093970
Alignment:
Q  23 caaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg 81  Q
    ||||||||  |||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  15093912 caaaagattttatttcccttttgttagggggttaaaagagcttatttccctaaacatgg 15093970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 17305897 - 17305836
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||| ||||||||| ||||||||||||    
T  17305897 catatttcccttatgttaggaggtcaaaagagcatattttcctaaacataggggtcactttt 17305836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 31494043 - 31493982
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||| ||||||||||  |||| |||||||||||||||||||||||| ||||||||||||    
T  31494043 catattttccttatgttagagggtcaaaagagcatatttccctaaacataggggtcactttt 31493982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 14624754 - 14624676
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||| |||||||  | ||||||||||||||||||||| | |||||||||||||| ||||||||| |||| ||||||    
T  14624754 aagataaagggtcaaaaagt-atatttcccttatgttatggg-tcaaaagagcatattttcctaaacattgggttactttt 14624676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 21225719 - 21225766
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  21225719 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 21225766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 24597686 - 24597734
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  24597686 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 24597734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 48176134 - 48176181
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  48176134 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 48176181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19195384 - 19195446
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||| |||||||||||||||  ||||||||||||    
T  19195384 catatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcactttt 19195446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 148
Target Start/End: Complemental strand, 5490559 - 5490517
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  5490559 agggggccaaaatcgcaactttttgaaacataaggggtgaaaa 5490517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 15681782 - 15681720
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccct 73  Q
    ||||||| | |||||||||||||| ||||||||||||| ||||| |||||| |||| ||||||    
T  15681782 aagataaggggtcaaaagatcatagttcccttatgttagggggtcaaaagatcatagttccct 15681720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 19493564 - 19493617
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||||||||| ||||    
T  19493564 tagggggtcaaaatcgcaacattttaaaacttaaagggcgaaaaatgcagttta 19493617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 44078042 - 44078091
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatg 80  Q
    |||||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  44078042 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatg 44078091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 148
Target Start/End: Complemental strand, 46265923 - 46265878
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||    
T  46265923 cttagggggccaaaatcccaacttcttaaaacttaaggggttaaaa 46265878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 3148072 - 3148004
Alignment:
Q  15 taaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    ||||| |||||| || ||||||||| |||| ||| ||| | |||||||||||| |||||||||||||||    
T  3148072 taaagggtcaaaggagcatatttccattattttaggggatcaaaagagcatatatccctaaacatgggg 3148004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 7365379 - 7365292
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatg--ttat-ggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| ||||||||| |||||||||||||||||  |  | ||||| || ||||||||||| || |||||| |||||||||||    
T  7365379 tgagaagataaggagtcaaaatatcatatttcccttatgcatggtaggggtcaatagagcatatttgccaaaacattgggtcactttt 7365292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 11843349 - 11843396
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  11843349 catattttccttatgtta-ggggtcaaaagagcatatttccctaaacat 11843396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 36746674 - 36746722
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  36746674 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 36746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 91
Target Start/End: Complemental strand, 1921039 - 1921004
Alignment:
Q  56 aaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||||||||||||||||||| |||||||||    
T  1921039 aaaagagcatatttccctaaacatggagtcactttt 1921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 158
Target Start/End: Complemental strand, 4193603 - 4193556
Alignment:
Q  111 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    ||||||||||||||||||||||| |||||| ||| ||| |||||||||    
T  4193603 gccaaaatcgcaactttttaaaatttaaggagtgtaaagtgcacttta 4193556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 9822247 - 9822294
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggt 54  Q
    ||||||||||| | ||||||||||| |||||||||||||||| |||||    
T  9822247 tgagaagataaggggtcaaaagatcgtatttcccttatgttagggggt 9822294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 10023956 - 10024003
Alignment:
Q  32 atatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||| |||||||| | ||||| ||||||||||||||||||||||||    
T  10023956 atattttccttatgtaagggggtcaaaagagcatatttccctaaacat 10024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 10655462 - 10655415
Alignment:
Q  32 atatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| ||||| ||| ||| ||||||||||||||||||||||||||    
T  10655462 atatttctcttatattaggggattaaaagagcatatttccctaaacat 10655415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 10724172 - 10724219
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggt 54  Q
    ||||||||||| | ||||||||||| |||||||||||||||| |||||    
T  10724172 tgagaagataaggggtcaaaagatcgtatttcccttatgttagggggt 10724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 31494158 - 31494225
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaaac 172  Q
    |||||||||||||||||||| |||| |||| ||  | | |||||||||| ||||||||||||| ||||    
T  31494158 tagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagccaataaataaac 31494225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 41452420 - 41452482
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| | ||||| ||||||||||||||||  ||||||||||||    
T  41452420 catatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcactttt 41452482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 3227637 - 3227695
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||| ||||| ||| ||| |||| ||||| ||||||||||||    
T  3227637 cttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 3227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 148
Target Start/End: Original strand, 4436132 - 4436170
Alignment:
Q  110 ggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  4436132 ggccaaaatcgctactttttaaaacttaaggggtaaaaa 4436170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 134
Target Start/End: Original strand, 9477447 - 9477477
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaac 134  Q
    |||||||||||||||||||||||||||||||    
T  9477447 ttagggggccaaaatcgcaactttttaaaac 9477477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 42303303 - 42303261
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttat 49  Q
    ||||||||||| | |||||||||||||||||||||||| ||||    
T  42303303 tgagaagataaggggtcaaaagatcatatttcccttatattat 42303261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 6650655 - 6650614
Alignment:
Q  50 ggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||| ||||||||||||||||||||| |||||||| |||||    
T  6650655 ggggtcaaaagagcatatttccctaaatatggggtccctttt 6650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 7313126 - 7313081
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatg 151  Q
    ||||||||||||| |||||||||  ||||||||||||| |||||||    
T  7313126 agggggccaaaattgcaacttttgcaaacttaaggggtaaaaaatg 7313081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19919774 - 19919834
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||| |||||||||| | ||| |||||||||||||| ||||||||| ||||||||||||    
T  19919774 catattttccttatgttaggaggtcaaaagagcatattt-cctaaacatgggggtcactttt 19919834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Original strand, 23373669 - 23373722
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||||||  ||||||||||| |||||||||||| |||| ||||||| |||||||    
T  23373669 tagggggttaaaatcgcaacattttaaaacttagggggcgaaaaatacacttta 23373722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 24448215 - 24448256
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccc 72  Q
    |||||||||||||||||| ||||| |||| ||||||||||||    
T  24448215 catatttcccttatgttagggggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 29051675 - 29051634
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcac 154  Q
    ||||||| ||||||||||||||||||||| |||||| |||||    
T  29051675 caaaatcacaactttttaaaacttaagggttgaaaagtgcac 29051634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 39440283 - 39440328
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatat 67  Q
    ||||||||||||||||||||||||||| | ||| |||||| |||||    
T  39440283 tcaaaagatcatatttcccttatgttaggaggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 6798032 - 6798095
Alignment:
Q  9 agaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccct 73  Q
    ||||||||| | ||||||||||||||||| ||||||||||  |||| |||| | |||||||||||    
T  6798032 agaagataaggggtcaaaagatcatattttccttatgttagagggtcaaaa-atcatatttccct 6798095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8526929 - 8526881
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||| |||||||||| |||||||||    
T  8526929 catatttcccttatgttaggaggtcaaatgagcatattttcctaaacat 8526881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 8527042 - 8527098
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| |||  || |||| ||||| ||||||||||||    
T  8527042 tagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcc 8527098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 20636675 - 20636643
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaactta 137  Q
    |||||||||||||||||||| ||||||||||||    
T  20636675 tagggggccaaaatcgcaacattttaaaactta 20636643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 20636866 - 20636922
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  20636866 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 20636922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 20638547 - 20638515
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaactta 137  Q
    |||||||||||||||||||| ||||||||||||    
T  20638547 tagggggccaaaatcgcaacattttaaaactta 20638515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 27869252 - 27869196
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  27869252 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 42271580 - 42271636
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| ||||| ||||| ||||||||| || |||| ||||| ||||||||||||    
T  42271580 tagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcc 42271636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 161
Target Start/End: Original strand, 26829237 - 26829389
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    ||||| ||||| | |||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||| |||||||||| | |       | ||    
T  26829237 tgagatgataaggggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttccttaaacatgaggtcacttttgtca-ttttttcata 26829334  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||| |||||||||||||||| |||||| ||||||||||||    
T  26829335 gggggccaaaatcgcaacattttaaaacttaagggatgaaaagtgcactttagcc 26829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 36464429 - 36464345
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| |||||||||||| ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  36464429 tgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaagatcatatttccctaaacatggggtcactttt 36464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 28365666 - 28365512
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttat-aannnnnnnct 104  Q
    ||||||||||| | || |||||||||||||||||| |||||| ||||| ||| ||||||||||||||||| || |||||||||||| | |        |     
T  28365666 tgagaagataaggggttaaaagatcatatttccctcatgtta-ggggtcaaacgagcatatttccctaaatataggggtcacttttgtcattttttttca 28365568  T
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    || |||| ||||||||||||||||||||| |||||||||||||| |||| |||||||    
T  28365567 ta-ggggtcaaaatcgcaactttttaaaatttaaggggtgaaaagtgcattttagcc 28365512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 4587994 - 4587932
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  4587994 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 4587932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 25884325 - 25884410
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||||||| | || |||| |||||||||||||||||||| ||| |||||| | |||||||| |||||||| ||||||||||||    
T  25884325 tgagaagataaggggttaaaatatcatatttcccttatgttaggggattaaaataacatatttctctaaacatgggggtcactttt 25884410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 2986819 - 2986757
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  2986819 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 2986757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 11176040 - 11175978
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  11176040 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 11175978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 15700880 - 15700820
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactt 89  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||    
T  15700880 catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 15700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 331854 - 331783
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg--ggtcactttt 91  Q
    |||||| | ||||||||||||| ||||  |||| ||||||||||||||||||||||||||  ||||||||||    
T  331854 tcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggtcactttt 331783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 9051198 - 9051246
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  9051198 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 9051246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 15700803 - 15700747
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  15700803 taggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 15700747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 30714331 - 30714275
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||||||||| || |||| ||||| ||||||||||||    
T  30714331 tagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 30714275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 38716326 - 38716194
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcacttttataannnnnnncttagggggccaaaatcgcaactttt 128  Q
    |||||||| ||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||   |         ||||||| |||||||||||| |||    
T  38716326 catatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatttttttaatagggggtcaaaatcgcaacattt 38716227  T
Q  129 taaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||  ||||||||| || | |||||||    
T  38716226 taaaacttagagggtgaaaagtgaagtttagcc 38716194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 43301796 - 43301726
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 91  Q
    |||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||||  ||||||||||||||    
T  43301796 tcaaaagatcatatttcccttaagtta-ggggtcaaaagaacatacttccctaaacatatggggtcactttt 43301726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 6763888 - 6763950
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  6763888 catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 6763950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 15735197 - 15735135
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||| ||||||  ||||||||||||    
T  15735197 catatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcactttt 15735135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 18537999 - 18538061
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||||||| |||||||| ||| |||| |||||||||||||||||||  ||||||||||||    
T  18537999 catatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcactttt 18538061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 22191179 - 22191117
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| |  || ||||||||||||||||||||||||  ||||||||||||    
T  22191179 catatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcactttt 22191117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 25298972 - 25299034
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||||| |||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  25298972 catatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcactttt 25299034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 30714445 - 30714507
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||| ||||||  ||||||||||||    
T  30714445 catatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcactttt 30714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 32677866 - 32677816
Alignment:
Q  111 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||||||||||| | || ||||||||||||||||||    
T  32677866 gccaaaatcgcaacattttaaaacttaggaggcgaaaaatgcactttagcc 32677816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 36449836 - 36449778
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  36449836 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 23048347 - 23048290
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||||||||| ||||||  |||||||  ||||||||| |||||||    
T  23048347 ttagggggccaaaatcgcaacttcttaaaatataaggggccaaaaatgcaatttagcc 23048290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 2190665 - 2190606
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||| ||||| ||||  |||| |||||||||||||||||||||||| |||||||||||    
T  2190665 catattttccttaagttagagggtcaaaagagcatatttccctaaacat-gggtcactttt 2190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 9787692 - 9787644
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||||||||||||||   ||| ||||||||||||||||||||||||    
T  9787692 catatttcccttatgttagcaggtcaaaagagcatatttccctaaacat 9787644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 25884234 - 25884178
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||||||||||| |||| ||||  |||| |||||||    
T  25884234 tagggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagcc 25884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 147
Target Start/End: Original strand, 5819761 - 5819800
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaa 147  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  5819761 ggggccaaaatcgcaactttttgaaacttaaggggggaaa 5819800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 25298857 - 25298798
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 164  Q
    |||| ||||||||||||||| ||||||||| || |||| ||||| ||||||||| |||||    
T  25298857 taggaggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttaaccaat 25298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 28543227 - 28543164
Alignment:
Q  162 aataaagaaactttggaaggaaccaacttgtgttatacatttg-tgttgcaccatttgccacag 224  Q
    |||||||||||||||||||||| |||||||||  ||||||| | |||||| |||||||| ||||    
T  28543227 aataaagaaactttggaaggaatcaacttgtgccatacattagttgttgcgccatttgcaacag 28543164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 7899925 - 7899983
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| ||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  7899925 cttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 163
Target Start/End: Complemental strand, 9051076 - 9051026
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||| ||||||||| || | || ||||||||||||||||||||    
T  9051076 caaaatcgcaacattttaaaacataggaggcgaaaaatgcactttagccaa 9051026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 12350072 - 12350026
Alignment:
Q  112 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||||||| |||| |||||||||||||||| |||||| |||||||||    
T  12350072 ccaaaatcacaacattttaaaacttaagggttgaaaagtgcacttta 12350026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 76
Target Start/End: Complemental strand, 12350154 - 12350101
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaa 76  Q
    |||||| |||||||||||||||  ||| ||||| |||||||||||||||||||||    
T  12350154 tcaaaatatcatatttcccttacctta-ggggtcaaaagagcatatttccctaaa 12350101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 13830322 - 13830265
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||| ||||||||||||||||| |||||| ||||| ||||| ||||||||| ||||    
T  13830322 tagggggtcaaaatcgcaactttttcaaactt-aggggggaaaagtgcactttaaccaa 13830265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 36464324 - 36464278
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 159  Q
    |||||||||||| ||||||||||||||||| ||||||| || |||||    
T  36464324 caaaatcgcaacattttaaaacttaaggggcgaaaaatacagtttag 36464278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 38840536 - 38840594
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||| ||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  38840536 cttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 38840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 2190782 - 2190835
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| ||||||||||||||||| ||||||  | |||||||||||| ||||    
T  2190782 ggggccaatatcgcaactttttaaaagttaaggtataaaaaatgcacttaagcc 2190835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 22387239 - 22387288
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatg 80  Q
    |||||||| | ||||||| ||||| ||||||||||||||| |||||||||    
T  22387239 catatttctcatatgttagggggtcaaaagagcatatttcactaaacatg 22387288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 34257154 - 34257117
Alignment:
Q  116 aatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  34257154 aatcgcaactttttaaaagttaaggggttaaaaatgca 34257117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 161
Target Start/End: Complemental strand, 38839299 - 38839242
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||| ||||| |||| ||||| ||| ||||||||  |||||||||||||||||    
T  38839299 ttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcc 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 1034514 - 1034570
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||  ||||| ||| |||||||| ||||| ||||||||||||    
T  1034514 tagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 2986934 - 2986990
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| |||| ||  | ||||||| ||||||||||||    
T  2986934 tagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagcc 2986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 91
Target Start/End: Complemental strand, 15147852 - 15147816
Alignment:
Q  56 aaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15147852 aaaagagcatatttccctaaacatgggggtcactttt 15147816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 30793901 - 30793869
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaactta 137  Q
    ||||||||||||||||| |||||||||||||||    
T  30793901 tagggggccaaaatcgctactttttaaaactta 30793869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 161
Target Start/End: Complemental strand, 10077 - 9923
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg-gggtcacttttat-aannnnnnnct 104  Q
    ||||||||||| | ||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| | |        |     
T  10077 tgagaagataaggggtctaaagatcatattttccttatgttat-gggtcaaaagagcatatttccctaaacatgagggtcacttttgtcattttttttca 9979  T
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    || |||||||||||| ||||| ||||||||||||||||| |||||||||||||||||    
T  9978 ta-ggggccaaaatcacaactatttaaaacttaaggggtaaaaaatgcactttagcc 9923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 26240111 - 26239957
Alignment:
Q  9 agaagataaagagtcaaaagatcatatttcccttatgtt-atggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnnctt 105  Q
    ||||||||| | ||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||  |||||||||||| | |       | |    
T  26240111 agaagataaggggtcaaaagatcatatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttgtca-ttttttcat 26240013  T
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    || ||| ||||||| |||||||||||||||||||||||||||| ||| ||||||||    
T  26240012 agcgggacaaaatcacaactttttaaaacttaaggggtgaaaagtgctctttagcc 26239957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 4013814 - 4013899
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||||||| | |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  4013814 tgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacatgggggtcactttt 4013899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 161
Target Start/End: Original strand, 16415492 - 16415634
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttataannnnnnn-cttagggggccaaaat 118  Q
    ||||||| |||||||||||||||||||| | ||| ||||||  |||||||||||||||| |||||||||||| |||        | || |||| ||||||    
T  16415492 gtcaaaatatcatatttcccttatgttaggcggtcaaaagaatatatttccctaaacataggggtcacttttgtaaaaaaaaatcataaggggtcaaaat 16415591  T
Q  119 cgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  16415592 cgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 16415634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 4371050 - 4370969
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcactttt 91  Q
    ||||||| | |||||| || |||||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||    
T  4371050 aagataaggggtcaaaggagcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacatggagggtcactttt 4370969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 18791490 - 18791428
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  18791490 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 18791428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 22968325 - 22968387
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  22968325 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 22968387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 23820068 - 23820006
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  23820068 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 23820006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 9241808 - 9241742
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 75  Q
    ||||||||||| | ||||||||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  9241808 tgagaagataaggggtcaaaagatcatatttcccttatgtta--gggtcaaaagaacatatttccctaa 9241742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 12291565 - 12291618
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaag 60  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||| |||||    
T  12291565 tgagaagataaagggtcaaaagatcatatttcccttatgttagggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 18749289 - 18749361
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||| || |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  18749289 gtcaaatgaacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcactttt 18749361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 32682449 - 32682510
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  32682449 catatttcctttatgttatgaggtcaaaagagcatatttccctaaacataggggtcactttt 32682510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 3118812 - 3118764
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  3118812 catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 3118764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 24603494 - 24603432
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  24603494 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 24603432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 34834058 - 34833996
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  34834058 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 34833996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 2058991 - 2059055
Alignment:
Q  29 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcactttt 91  Q
    |||||||||||||||||||| || || |||| ||||||||||||||||||||  |||||||||||    
T  2058991 atcatatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcactttt 2059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 14572349 - 14572410
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| |  || |||||||||||||||||||||||| ||||||||||||    
T  14572349 catatttcccttatgttaggatgtcaaaagagcatatttccctaaacataggggtcactttt 14572410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 4597576 - 4597624
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  4597576 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 4597624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 8149061 - 8149140
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||| |||||||||||||||||||||| |||||||  |||| ||||||  |||||||| |||| || |||||||||||    
T  8149061 aagataaggagtcaaaagatcatatttcccctatgttaaagggtcaaaagattatatttccttaaatat-gggtcactttt 8149140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 8412891 - 8412843
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  8412891 catatttcccttatgttagggggtcaaaagagcatatttctctaaacat 8412843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 12427384 - 12427312
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    ||||||||| || |||| | ||||||||| ||||||||  || | ||||||||||||||||||||||||||||    
T  12427384 aagataaagggtaaaaaaaacatatttcctttatgttaatggttcaaaagagcatatttccctaaacatgggg 12427312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 27437884 - 27437828
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  27437884 tagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 27437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 27447962 - 27448014
Alignment:
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  27447962 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 27448014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 35102662 - 35102710
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  35102662 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 15298618 - 15298556
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  15298618 catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 15298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 31210927 - 31210865
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||| |||||||||  ||||||||||||    
T  31210927 catatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcactttt 31210865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 104 - 154
Target Start/End: Complemental strand, 20863784 - 20863734
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcac 154  Q
    |||||||||||||| ||||||||||||||| |||||| || ||||||||||    
T  20863784 ttagggggccaaaaccgcaactttttaaaagttaaggtgtcaaaaatgcac 20863734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 50 - 161
Target Start/End: Original strand, 23124879 - 23124990
Alignment:
Q  50 ggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaa 149  Q
    ||||| |||||||||||||| |||||||||||||||||| || | |         |||||| ||||||||||||| |||||||| ||| | ||||||||     
T  23124879 ggggtcaaaagagcatattttcctaaacatggggtcactattttcatttttataataggggaccaaaatcgcaacattttaaaatttaggaggtgaaaag 23124978  T
Q  150 tgcactttagcc 161  Q
    |||| |||||||    
T  23124979 tgcaatttagcc 23124990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 24051140 - 24051079
Alignment:
Q  32 atatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||||| ||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  24051140 atatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 24051079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 104 - 161
Target Start/End: Original strand, 7316338 - 7316395
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  7316338 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 22269539 - 22269479
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| ||| | |||||| ||||||||||||||||| ||||||||||||    
T  22269539 catatttcccttatgttaaggg-tcaaaagaacatatttccctaaacataggggtcactttt 22269479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 22968404 - 22968457
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||| |||| |||||||||||| ||||| || |||||||||    
T  22968404 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 22968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 23819989 - 23819936
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||| |||| |||||||||||| ||||| || |||||||||    
T  23819989 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 23819936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 25819817 - 25819756
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| | ||||| |||||||||||||||| ||||||||||||    
T  25819817 catatttcccttatgttaggaggtcagaagagtatatttccctaaacataggggtcactttt 25819756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 5658795 - 5658759
Alignment:
Q  122 aactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5658795 aactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 6842328 - 6842384
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||||||||| |||||||  ||| ||||| ||||||||||||    
T  6842328 tagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 14195805 - 14195857
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 156  Q
    |||||||||| ||||||||||||||||||| |||| | || ||||||||||||    
T  14195805 ttagggggccgaaatcgcaactttttaaaagttaatgtgtcaaaaatgcactt 14195857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 18749153 - 18749097
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| ||||| ||||||||| ||||||| ||||| |||| |||||||    
T  18749153 tagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcc 18749097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 24615865 - 24615924
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||| | ||||||| ||||| |||||||||||||||||||| | |||||||||||||    
T  24615865 catatttctcatatgtta-ggggtcaaaagagcatatttccctaatcgtggggtcactttt 24615924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 26710478 - 26710526
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||    
T  26710478 catattttccttatgttaggaggtcaaaagagcatatttccctaaacat 26710526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 29473126 - 29473082
Alignment:
Q  112 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 156  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||    
T  29473126 ccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 31329890 - 31329846
Alignment:
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    |||||||||||||||||||||||||| || |||||||||| ||||    
T  31329890 gggccaaaatcgcaactttttaaaacatatggggtgaaaagtgca 31329846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 3333581 - 3333628
Alignment:
Q  114 aaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||||||| |||  |||||||||||||||||    
T  3333581 aaaatcgcaactttttcaaacttaaagggataaaaatgcactttagcc 3333628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 32451859 - 32451797
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||  |||||||  ||||||||||||    
T  32451859 catatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcactttt 32451797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 6840245 - 6840211
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaagggg 142  Q
    |||||||||||||||||||||| ||||||||||||    
T  6840245 ggggccaaaatcgcaactttttgaaacttaagggg 6840211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 14822418 - 14822360
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||| ||||||||||| |||| ||||| ||| |||||||||||||| |||||| |||||    
T  14822418 cttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 18791605 - 18791662
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaagggg-tgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||||||||| || ||||  ||||| ||||||||||||    
T  18791605 tagggggccaaaatcgcaacattttaaaacatagggggacgaaaagtgcactttagcc 18791662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 2059068 - 2059124
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||| |||||||| ||| || | |||||||||| |||||||    
T  2059068 tagggggtcaaaatcgcaacattttaaaatttagggagcgaaaaatgcaatttagcc 2059124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 3333071 - 3333103
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaactta 137  Q
    ||||||||||||||||||||||||| |||||||    
T  3333071 tagggggccaaaatcgcaactttttcaaactta 3333103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 8412814 - 8412758
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||| |||||||||||||| |||| |||||||||||| | ||| || |||||||||    
T  8412814 tagggagccaaaatcgcaacattttgaaacttaaggggcggaaagtggactttagcc 8412758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 14195699 - 14195631
Alignment:
Q  24 aaaagatcatatttcccttatgttatggggt-taaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||| ||||||||||| ||||||  | ||  |||||| ||||||||||| |||||||||||||||||    
T  14195699 aaaagaccatatttccctcatgttagagagtcaaaaagaacatatttcccttaacatggggtcactttt 14195631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 34834180 - 34834228
Alignment:
Q  113 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||  ||||||||| ||||||| ||||| ||||||||||||    
T  34834180 caaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcc 34834228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 35102547 - 35102491
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| ||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  35102547 tagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 35102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 29872 - 29789
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||    
T  29872 tgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttccccaaacatggggtcactttt 29789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 6e-24; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 1824761 - 1824678
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||||  ||| |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1824761 tgagaagataagaagttaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacatggggtcactttt 1824678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 1859206 - 1859123
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||||  ||| |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1859206 tgagaagataagaagttaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacatggggtcactttt 1859123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 4423171 - 4423336
Alignment:
Q  1 attttatgagaagataaagagtcaaaagatcatatttcccttatgttatgg-ggttaaaagagcatatttccctaaacat--ggggtcacttttataann 97  Q
    ||||| ||| ||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||  |||||||||| | | |      
T  4423171 attttttgaaaagataaggggtcaaaagatcatatttcccttatgttatggaggttaaaagaacatatttccataaacatggggggtcacttctgtcatt 4423270  T
Q  98 nnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
         | ||| | ||||||||||||| ||||| || ||||||| || |||| ||||||||||||||    
T  4423271 tttttcatagagagccaaaatcgcaaatttttgaagcttaaggagtaaaaattgcactttagccaa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 92
Target Start/End: Original strand, 18253034 - 18253118
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttta 92  Q
    ||||||||||| | ||||||| ||||||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  18253034 tgagaagataaggggtcaaaaaatcatatttcccttatgttat-gggtcaaaaaaacatatttccctaaacatggggtcactttta 18253118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 161
Target Start/End: Complemental strand, 3208134 - 3207983
Alignment:
Q  9 agaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg--tcacttttataannnnnnnctta 106  Q
    ||||||||| | ||||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||||| | |  |||||||| | |       | ||    
T  3208134 agaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatatttccctaaacatagaggttcacttttgtcacttttt-cata 3208037  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    | || |||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  3208036 gagg-ccaaaatcacaactttttaaaacttaagaggtgaaaaatgcactttagcc 3207983  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 21929974 - 21930035
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  21929974 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 21930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 21666445 - 21666497
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  21666445 catatttcccttatgttagggggtcaagagagcatatttccctaaacatgggg 21666497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 17648376 - 17648314
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  17648376 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 17648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 19391558 - 19391620
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  19391558 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 19391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 30784435 - 30784497
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  30784435 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcactttt 30784497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 36249608 - 36249551
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
    |||| ||||||||| |||||||||| |||||||||||| ||||| |||||||||||||    
T  36249608 taggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcca 36249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 44147104 - 44147043
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||| ||||||||||||||||||| ||||||||||||    
T  44147104 catatttcccttatgttaggaggtcaaaatagcatatttccctaaacataggggtcactttt 44147043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 161
Target Start/End: Complemental strand, 3380331 - 3380199
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttt 128  Q
    ||||||||||||||| ||  |||  |||||||||||||| |||||||||  ||||||||| || | |         ||||| |||||||||||||| |||    
T  3380331 catatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactattttcatttttttaatagggagccaaaatcgcaacattt 3380232  T
Q  129 taaaacttaaggggtgaaaaatgcactttagcc 161  Q
    | |||||||| |||||||||||||| |||||||    
T  3380231 tgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 5192442 - 5192490
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  5192442 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacat 5192490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 7117266 - 7117346
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||| | || |||||| || ||| ||||| |||||  |||| ||||||||||||||| ||||||||||||||||||||    
T  7117266 aagataaggggttaaaagaacacattccccttctgttagtgggtcaaaagagcatatttctctaaacatggggtcactttt 7117346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 167
Target Start/End: Original strand, 10007806 - 10007870
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 167  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| |||||||||||| |||||    
T  10007806 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctataaa 10007870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 19499432 - 19499480
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgc 152  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  19499432 ttagggggccaaaatcgcaactttttaaaagttacggggttaaaaatgc 19499480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 31268430 - 31268360
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 83  Q
    ||||||||| ||| ||||| |||||| ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  31268430 aagataaagggtctaaagagcatatt-cccttatgttatggggc-aaaagagcatatttccctaaacacgggg 31268360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 33895507 - 33895459
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  33895507 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 33895459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 38630188 - 38630140
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  38630188 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 38630140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 3819541 - 3819487
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||||||| ||||| |||| |||||||||||| ||||||||||||||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaagggg-gaaaaatgcactttagccaa 3819487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 4519038 - 4519100
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||  ||||||||||||    
T  4519038 catatttcccttatgttaggagatcaaaagagcatatttccctaaacatagggggtcactttt 4519100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 32400493 - 32400555
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||| ||||||||| ||||||||  ||||||||||||    
T  32400493 catatttcccttatgttagggggtcaaaagcgcatatttcactaaacatagggggtcactttt 32400555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 41688258 - 41688333
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggg 82  Q
    ||||||||||| | ||||||| |||| ||||  ||||||||| ||||| |||||| |||||||| |||||||||||    
T  41688258 tgagaagataaggggtcaaaatatcagatttttcttatgttaaggggtcaaaagaacatatttctctaaacatggg 41688333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 8802572 - 8802618
Alignment:
Q  33 tatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8802572 tatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 8802618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 34602069 - 34602011
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 164  Q
    |||||||||||||||||||||||| |||| || |||||||||| |||| || |||||||    
T  34602069 agggggccaaaatcgcaactttttgaaacatagggggtgaaaagtgcatttaagccaat 34602011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 11282064 - 11282011
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||||||||||||| |||||||||||||| ||||||||  |||| |||||||||    
T  11282064 tagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 76
Target Start/End: Original strand, 22452344 - 22452389
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaa 76  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||    
T  22452344 catatttcccttatgttaggaggtcaaaagagcatatttccctaaa 22452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 39910233 - 39910286
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 75  Q
    ||||||||||||||||| || | ||||  |||||||||||||||||||||||||    
T  39910233 tcaaaagatcatatttcactaaagttagagggttaaaagagcatatttccctaa 39910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 8802456 - 8802400
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||||||||| || |||  ||||| ||||||||||||    
T  8802456 tagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagcc 8802400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 12723432 - 12723480
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  12723432 catatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 12723480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 18881655 - 18881734
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||| | ||||||||| | ||||||||||||||||   | | |||| ||||||||||||||||||| |||||||||||    
T  18881655 aagataaggggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccctaaacat-gggtcactttt 18881734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 21929903 - 21929847
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||| |||||||||||||| |||| |||| || |||| ||||||||||||||||||    
T  21929903 tagggagccaaaatcgcaacgttttgaaacatagggggcgaaaaatgcactttagcc 21929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 38974849 - 38974793
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||    
T  38974849 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 38974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 39005947 - 39005891
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||    
T  39005947 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 39005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 15869500 - 15869569
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttta 92  Q
    |||||||||||||||||| |||| |||| | ||| ||||||||||||||| ||||||||  |||||||||||    
T  15869500 gtcaaaagatcatatttctctta-gtta-gaggtcaaaagagcatatttctctaaacataaggtcactttta 15869569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 19924398 - 19924336
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| | ||||| ||||||||||||||||  ||||||||||||    
T  19924398 catatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcactttt 19924336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Complemental strand, 27453181 - 27453134
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    ||||||||||| |||||||||||| |||| || |||||||||||||||    
T  27453181 agggggccaaattcgcaactttttgaaacatagggggtgaaaaatgca 27453134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 29968380 - 29968434
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||||||||||||||| |||| ||||||||| |||||||| ||||| |||||||||    
T  29968380 cttagggggccaaaattgcaagtttttaaaagttaagggg-gaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 30927676 - 30927727
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 159  Q
    ||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  30927676 ggggctaaaatcgcaacttttttaaacttaaagggggaaaaatacactttag 30927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 161
Target Start/End: Original strand, 42982703 - 42982758
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||  |||||||||||||||||| ||  ||||| ||||||||||||    
T  42982703 agggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcc 42982758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 142
Target Start/End: Complemental strand, 2373324 - 2373286
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaagggg 142  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  2373324 ttagggggccaaaatcacaactttttaaaagttaagggg 2373286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 12351979 - 12351921
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||| |||||| |||| ||||| ||| |||||||| | ||||||||||||||||    
T  12351979 cttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcc 12351921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 12353403 - 12353460
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  12353403 cttagggggccaaaattgcaagtttttgaaagttaagggg-gaaaagtgcactttagcc 12353460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 138
Target Start/End: Original strand, 16233714 - 16233748
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaa 138  Q
    |||||||||||||||||||||||||||||| ||||    
T  16233714 ttagggggccaaaatcgcaactttttaaaagttaa 16233748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 161
Target Start/End: Complemental strand, 30335689 - 30335639
Alignment:
Q  111 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| |||| ||||||||| |||||||  ||||||||||||||||||    
T  30335689 gccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 32968510 - 32968456
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  32968510 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 32968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 38980091 - 38980145
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  38980091 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38980145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 39011188 - 39011242
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  39011188 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39011242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 4807771 - 4807834
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat---ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||| ||||||||| |||||||   ||||||||||||    
T  4807771 catatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcactttt 4807834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 164
Target Start/End: Complemental strand, 10006402 - 10006341
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 164  Q
    |||||||||||||||| |||| ||||| ||| |||  ||| ||||| |||||||||||||||    
T  10006402 cttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccaat 10006341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 14170479 - 14170430
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    ||||||||||||||||||||||| ||||||| || ||||| |||| ||||    
T  14170479 ttagggggccaaaatcgcaacttcttaaaacatagggggtcaaaactgca 14170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 29435137 - 29435088
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    ||||||||  ||||||||||| ||||||||| |||| |||||||||||||    
T  29435137 ttagggggttaaaatcgcaacattttaaaacataagaggtgaaaaatgca 29435088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 4518925 - 4518869
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||  ||||||||  || |||| ||||| ||||||||||||    
T  4518925 tagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcc 4518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 7117361 - 7117417
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||| || ||||||||||||||||| ||||||||| ||||| || |||| |||||||    
T  7117361 taggtggtcaaaatcgcaactttttgaaacttaagtggtgataagtgcagtttagcc 7117417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 11283254 - 11283310
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| |||||  ||||||||| ||| |||||||| | ||||||||||||||||    
T  11283254 tagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 11456694 - 11456638
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||| ||||| ||| ||| |||| ||||| ||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 18881560 - 18881524
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggg 141  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  18881560 tagggggccaaaatcgcaacatttcaaaacttaaggg 18881524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 32973983 - 32974039
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||||| |||| ||| ||| ||||  |||| ||||||||||||||    
T  32973983 gggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagccaa 32974039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 44147218 - 44147274
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||  |||| |||| || |||| ||||| ||||||||||||    
T  44147218 tagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcc 44147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 3739 - 3799
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3739 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatggggtcactttt 3799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 3781030 - 3780952
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||| ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3781030 aagataaagggtcaaaa-agcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacatggggtcactttt 3780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 167
Target Start/End: Complemental strand, 46719997 - 46719935
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 167  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  46719997 tagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagccattaaa 46719935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 36311307 - 36311223
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||| | || ||||  ||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||    
T  36311307 tgagaagataaggggttaaaatgtcatatttcccttatgttatggggtcaaaagagtatattttcctaaatatggggtcactttt 36311223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 31 - 161
Target Start/End: Original strand, 40836350 - 40836482
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnct--tagggggccaaaatcgcaactttt 128  Q
    |||||||||||||| ||| ||||| |||||| |||||||||||||||||||||||||||||   |        |  ||||||| |||||||||||| |||    
T  40836350 catatttcccttatattagggggtcaaaagaacatatttccctaaacatggggtcacttttgccatttttttttaatagggggtcaaaatcgcaacattt 40836449  T
Q  129 taaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||| |||| |||||||||| |||||||    
T  40836450 taaaacttagggggcgaaaaatgcagtttagcc 40836482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 10743540 - 10743422
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttt 128  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||| | |         |||||||||||||||||||| |||    
T  10743540 catatttcccttatgtta-ggggttaaaagagcatatttccctaaacatagggagtcacttttgtcatttttttaatagggggccaaaatcgcaacattt 10743442  T
Q  129 taaaacttaaggggtgaaaa 148  Q
    ||||||||| |||| |||||    
T  10743441 taaaacttagggggcgaaaa 10743422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 20001846 - 20001780
Alignment:
Q  27 agatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  20001846 agatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 20001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 23320517 - 23320380
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    |||||||||||  |||||| | |||| | ||| ||||||||| ||||| ||||||||||||||||||||||||||| |||||||| | |       | ||    
T  23320517 tgagaagataagaagtcaatatatcagacttctcttatgtta-ggggtcaaaagagcatatttccctaaacatgggatcacttttgtca--tttttcata 23320421  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
     |||| ||||||||||||||||||||||||||||||||||||    
T  23320420 -ggggtcaaaatcgcaactttttaaaacttaaggggtgaaaa 23320380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 49657942 - 49658011
Alignment:
Q  21 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| || |||||||||||    
T  49657942 gtcaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaatattgggtcactttt 49658011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 25336512 - 25336354
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnnctta 106  Q
    ||||||| ||||  |||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||| || || |||||||| | |         ||    
T  25336512 tgagaagttaaaaggtcaaaaggtcatatttcccttatgttagggggtcaaaagagcataattccctaaatataggttcacttttgtcatttttttaata 25336413  T
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaata 165  Q
     | ||||||||| ||||| |||| ||| |||||||| ||||| |||| |||||||||||    
T  25336412 agaggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagccaata 25336354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 32315076 - 32314992
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||| |||||| | ||||||| || |||||||||| |||||| ||||| |||||| ||||||||||||||||||| |||||||||    
T  32315076 tgaggagataaggggtcaaaatataatatttccctcatgttagggggtcaaaagaacatatttccctaaacatggagtcactttt 32314992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 23428790 - 23428852
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  23428790 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 23428852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 25022834 - 25022896
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  25022834 catatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcactttt 25022896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 162
Target Start/End: Original strand, 46673218 - 46673351
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttt 128  Q
    |||||||||||||||||| || || ||||||||||||||||||||||||  ||| ||||||||   |         ||||||| |||||||||||| |||    
T  46673218 catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttttaatagggggtcaaaatcgcaacattt 46673317  T
Q  129 taaaacttaaggggtgaaaaatgcactttagcca 162  Q
     ||||||||||||| ||||| || ||||||||||    
T  46673318 gaaaacttaaggggcgaaaagtggactttagcca 46673351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 9496388 - 9496448
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||||||||| ||||||||||    
T  9496388 catatttcctttatgttagagggtcaaaagagcatatttccctaaacatgtggtcactttt 9496448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 28173900 - 28173948
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  28173900 catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 28173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 31039241 - 31039293
Alignment:
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  31039241 gggccaaagtcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 31039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 78
Target Start/End: Original strand, 33279747 - 33279803
Alignment:
Q  22 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca 78  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  33279747 tcaaaagagcatatttcccttatgttagggggtcaaaagagcatattttcctaaaca 33279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 4522087 - 4522025
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  4522087 catatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcactttt 4522025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 4776005 - 4775922
Alignment:
Q  9 agaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||||| |  ||||| ||||||||||||| ||||| | ||||| |||| ||||||||||||||||||| ||||||||||||    
T  4776005 agaagataagggatcaaaggatcatatttcccgtatgtgagggggtcaaaatagcatatttccctaaacatgggggtcactttt 4775922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 8542743 - 8542681
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  8542743 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 8542681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 13081027 - 13080965
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||| ||  ||||||||||||    
T  13081027 catatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcactttt 13080965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 26628196 - 26628258
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  26628196 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 26628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 27852922 - 27852984
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  27852922 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 27852984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 48907463 - 48907525
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  48907463 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 48907525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 1743405 - 1743334
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||||||| | |||||||||||| |||| |||||||||| ||||| ||||||| |||||| |||||||||    
T  1743405 tgagaagataaggggtcaaaagatcacattt-ccttatgttagggggtcaaaagagtatattttcctaaacat 1743334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 3821026 - 3820986
Alignment:
Q  51 gggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  3821026 gggtcaaaagagcatatttccctaaacatggggtcactttt 3820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 22447915 - 22447963
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  22447915 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 22447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 26127077 - 26127137
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||| |||||||  |||| |||| | |||||||||||||||||||||||||||||    
T  26127077 catatttcccctatgttagagggtcaaaataacatatttccctaaacatggggtcactttt 26127137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 26177127 - 26177187
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||||| |||||||  |||| |||| ||||||||||||| |||||||||||||||||    
T  26177127 catatttcccctatgttagagggtcaaaatagcatatttccctgaacatggggtcactttt 26177187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 26633530 - 26633589
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||| ||||||||| ||||    
T  26633530 catatttctcttatgtta-ggggtcaaaagagcatatttccctaaagatggggtcattttt 26633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 28155053 - 28155101
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  28155053 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 28155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 30155316 - 30155364
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  30155316 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 30155364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 3328984 - 3329046
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||  | ||||||||||||    
T  3328984 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttt 3329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 22500766 - 22500828
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||| |||||||||  ||||||||||||    
T  22500766 catatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcactttt 22500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 28263158 - 28263212
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||| |||||||| ||| |||| ||||| ||||||||||||    
T  28263158 gggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcc 28263212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 77
Target Start/End: Original strand, 34878700 - 34878746
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaac 77  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  34878700 catatttcccttatattagggggtcaaaagagcatatttccctaaac 34878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 35201143 - 35201214
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg 80  Q
    ||||||||||| | ||||||| ||||||||||| ||||||||  |||| |||||||||| |||||| |||||||    
T  35201143 tgagaagataaggggtcaaaatatcatatttcctttatgtta--gggtcaaaagagcatgtttcccaaaacatg 35201214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 46387744 - 46387806
Alignment:
Q  30 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    ||||||||||||||||||| ||| | |||||||||| ||||| ||||||| ||||||||||||    
T  46387744 tcatatttcccttatgttaggggatcaaaagagcatgtttccttaaacatgggggtcactttt 46387806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Original strand, 47615591 - 47615649
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Complemental strand, 22416486 - 22416403
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat---ggggtcactttt 91  Q
    ||||||| | ||||||||| ||||||| ||||||||||   ||| |||||||||||| |||||||||||   ||||||||||||    
T  22416486 aagataatgggtcaaaagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaacattggggggtcactttt 22416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 34296531 - 34296596
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaa 76  Q
    ||||||||| ||||||||| ||||||||| | | ||||  |||| |||||||||||||||||||||    
T  34296531 aagataaagggtcaaaagagcatatttccataaagttagagggtcaaaagagcatatttccctaaa 34296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 8542858 - 8542914
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||| |||| ||||||||| || || ||||||| ||||||||||||    
T  8542858 tagggggccaaaatcacaacattttaaaacatagggagtgaaaagtgcactttagcc 8542914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 19984905 - 19984849
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||| ||||| ||||||| |||| ||||| ||||||||||||    
T  19984905 tagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 40630627 - 40630683
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||||||||  ||||||| ||||| |||| ||||||||||||    
T  40630627 tagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcc 40630683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 46721265 - 46721321
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||  |||||||||||||||||||| ||| |||| ||||| ||||||||||||    
T  46721265 tagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcc 46721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 51038835 - 51038891
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||| |||||||||||||| |||||||  ||||| ||||||||||||    
T  51038835 tagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcc 51038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 8338996 - 8338937
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 164  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| |||||||||||||||    
T  8338996 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaat 8338937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 25179711 - 25179649
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||| |||| |||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  25179711 catatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 25179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 106 - 153
Target Start/End: Original strand, 44457445 - 44457492
Alignment:
Q  106 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 153  Q
    |||||||||||||||||||||||| |||| || | |||||||||||||    
T  44457445 agggggccaaaatcgcaactttttgaaacataggaggtgaaaaatgca 44457492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 105 - 168
Target Start/End: Complemental strand, 50296262 - 50296199
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaag 168  Q
    |||||||||||||| |||||||||  ||||||||||||  |||| |||| ||||||| ||||||    
T  50296262 tagggggccaaaattgcaacttttgcaaacttaaggggcaaaaagtgcattttagcctataaag 50296199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 18388866 - 18388932
Alignment:
Q  26 aagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||| |||||||  |||||| || ||||| |||||||||||||||||| ||||| ||||||||||||    
T  18388866 aagaacatatttatcttatggtagggggtcaaaagagcatatttcccttaacatgggggtcactttt 18388932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 31039127 - 31039196
Alignment:
Q  9 agaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    ||||||||||| ||||  |||||||||||||| ||||||| ||||| |||||||||| ||| ||| |||||    
T  31039127 agaagataaagggtcattagatcatatttcccatatgtta-ggggtcaaaagagcatgttttccttaacat 31039196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 161
Target Start/End: Complemental strand, 34319384 - 34319346
Alignment:
Q  123 actttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  34319384 acttttcaaaacttaaggggtgaaaaatacactttagcc 34319346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 43668565 - 43668511
Alignment:
Q  38 cccttatgttatggggttaaaagagcatatttccctaa-acatggggtcactttt 91  Q
    ||||||| |||  |||| |||||||||||||||||||| ||||||||||||||||    
T  43668565 cccttattttagagggtcaaaagagcatatttccctaacacatggggtcactttt 43668511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 51470030 - 51469968
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaata 165  Q
    |||||||||||||||| |||| ||||| ||| ||| || | ||||| ||||||||||||||||    
T  51470030 cttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagccaata 51469968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 784995 - 785040
Alignment:
Q  117 atcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
    ||||||||||||||||||||||||||  | || |||||||||||||    
T  784995 atcgcaactttttaaaacttaagggggaacaagtgcactttagcca 785040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 4776069 - 4776134
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaaact 173  Q
    ||||||||||||||||| ||||||| ||||  ||| ||||||| || ||||||||| ||| |||||    
T  4776069 ggggccaaaatcgcaacattttaaatcttagagggcgaaaaatccagtttagccaagaaaaaaact 4776134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 8313882 - 8313931
Alignment:
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||| ||| |||||||||| |||||| ||||||||||||| |||||||||    
T  8313882 gggctaaagtcgcaactttctaaaacataaggggtgaaaagtgcacttta 8313931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 8875959 - 8875906
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||| ||||| ||| ||||||  ||||||||||||||||| ||||||||||||    
T  8875959 ggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 19986120 - 19986173
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||| |||| ||||| ||||||||| || ||||| ||||||||||||    
T  19986120 ggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 138
Target Start/End: Original strand, 25310322 - 25310355
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaa 138  Q
    |||||| |||||||||||||||||||||||||||    
T  25310322 taggggaccaaaatcgcaactttttaaaacttaa 25310355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 36311205 - 36311152
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||||||||| |||||||||||| |||  ||||| |||| |||||||    
T  36311205 ggggccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagcc 36311152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 48860835 - 48860771
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttat 93  Q
    ||||||||||||||||||   ||| |||| |||||||||||||||||||  ||||||| ||||||    
T  48860835 catatttcccttatgttagaaggtcaaaatagcatatttccctaaacataaggggtcatttttat 48860771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 1743497 - 1743553
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||| ||||||||||||| |||||||||||| || | ||||| |||| |||||||    
T  1743497 taggggaccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagcc 1743553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 4522010 - 4521978
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaactta 137  Q
    |||||||||||||||||||| ||||||||||||    
T  4522010 tagggggccaaaatcgcaacattttaaaactta 4521978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 20001956 - 20002011
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| |||||| ||||| ||||| |||| |||||||    
T  20001956 tagggggccaaaatcgcaacattttgaaactt-aggggagaaaagtgcagtttagcc 20002011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21698443 - 21698495
Alignment:
Q  104 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 156  Q
    |||||||||| |||||||||| |||||||  ||||| ||| ||||||||||||    
T  21698443 ttagggggccgaaatcgcaacattttaaatgttaagaggtcaaaaatgcactt 21698495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 25179634 - 25179602
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaactta 137  Q
    |||||||||||||||||||| ||||||||||||    
T  25179634 tagggggccaaaatcgcaacattttaaaactta 25179602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 26126958 - 26126926
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaagg 140  Q
    |||||||||||||||||||||||||| ||||||    
T  26126958 ggggccaaaatcgcaactttttaaaagttaagg 26126926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 26628273 - 26628329
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||| |||||||  ||| |||||||| | |||||||    
T  26628273 tagggggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcc 26628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 26633416 - 26633361
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||| |||||||||||| ||||||||||| ||||| ||||| |||| |||||||    
T  26633416 tagggggtcaaaatcgcaacattttaaaactt-aggggcgaaaagtgcagtttagcc 26633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 28173785 - 28173729
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| || | |||| || |||| ||||| ||||||||||||    
T  28173785 tagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 28173729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 28173977 - 28174013
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggg 141  Q
    |||||||||||||||||||| |||| |||||||||||    
T  28173977 tagggggccaaaatcgcaacattttgaaacttaaggg 28174013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 7 - 148
Target Start/End: Complemental strand, 112283 - 112140
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg--ggtcacttttataannnnnnnct 104  Q
    ||||||||||| |||||||||||||||||||||||||||||| | ||| ||||  |||||||||||||||  |||  || ||||||| |||             
T  112283 tgagaagataaggagtcaaaagatcatatttcccttatgttaggaggtcaaaaaggcatatttccctaaatctgggaggacacttttgtaatttttttta 112184  T
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    |||||| |||||||||||||||||||||||||| | ||||||||    
T  112183 taggggaccaaaatcgcaactttttaaaacttatgaggtgaaaa 112140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 92
Target Start/End: Original strand, 25135 - 25198
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttta 92  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||    
T  25135 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttta 25198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 43972 - 44055
Alignment:
Q  7 tgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||||||||||  ||||||||||||||||||||||  |||| ||||| |||| ||||||||| ||||||||||||| |||||||    
T  43972 tgagaagataaaaggtcaaaagatcatatttccctttcgtta-ggggtcaaaaaagcatattttcctaaacatgggggcactttt 44055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 19415 - 19355
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  19415 catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacataggggtcactttt 19355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 61947 - 61885
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| |  || ||||||||||||||||||||||||  ||||||||||||    
T  61947 catatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcactttt 61885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 19529 - 19585
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||  ||| |||||||||||| |||||||||| |||||||    
T  19529 tagggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 62069 - 62122
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    ||||||||||| ||||| |||| |||| || ||||||||||||||| |||||||    
T  62069 ggggccaaaattgcaacattttgaaacatagggggtgaaaaatgcagtttagcc 62122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 142118 - 142179
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 91  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  142118 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 142179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 1945 - 2007
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| ||||| |||| |||||||||||||||||||  ||||||||||||    
T  1945 catatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggtcactttt 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 5820 - 5882
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  5820 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 5882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 49792 - 49732
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactt 89  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||    
T  49792 catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 49732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 62331 - 62271
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactt 89  Q
    |||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||    
T  62331 catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 62271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 49715 - 49659
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  49715 taggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 49659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 62254 - 62198
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  62254 taggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 62198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 812 - 756
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| |||  |||||||||||||||||| |||| |||||||    
T  812 tagggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagcc 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 908 - 989
Alignment:
Q  11 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca-tggggtcactttt 91  Q
    ||||||| | ||||||||| ||||||| ||||||||||   ||| |||| ||||||| |||||||||| |||||||||||||    
T  908 aagataaggggtcaaaagagcatatttaccttatgttagaaggtcaaaatagcatatatccctaaacattggggtcactttt 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Original strand, 3131 - 3179
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  3131 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 3017 - 2959
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||||||| |||| |||| || |||| ||||| ||||||||||||||    
T  3017 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaa 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 39396 - 39344
Alignment:
Q  109 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  39396 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 39344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 49478 - 49534
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  49478 tagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 49534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 2220 - 2282
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 91  Q
    |||||| ||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  2220 catattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 2282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Complemental strand, 2104 - 2048
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||| ||||| ||||||||| || |||| ||||| |||| |||||||    
T  2104 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 19546 - 19488
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| ||||  |||| ||| |||||||| ||||||||||||||||||    
T  19546 cttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcc 19488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 103 - 161
Target Start/End: Complemental strand, 17528 - 17470
Alignment:
Q  103 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||| |||| ||||||||| ||||||||  |||| ||||||||||||    
T  17528 cttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcc 17470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Complemental strand, 4338 - 4302
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggg 141  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4338 tagggggccaaaatcgcaactttttgaaacttaaggg 4302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 166 - 222
Alignment:
Q  107 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||    
T  166 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 9141 - 9101
Alignment:
Q  108 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 148  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  9141 ggggtcaaaatcgcaactttttaaaacttaagaggtgaaaa 9101  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 163
Target Start/End: Complemental strand, 250574 - 250516
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 163  Q
    ||||||| |||| ||||||| ||||||||| || |||| ||||| ||||||||||||||    
T  250574 tagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 250516  T

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Target: scaffold2034 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 162
Target Start/End: Complemental strand, 289 - 232
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 162  Q
    |||||| ||||||| |||||||||| ||| |||||||| | ||| |||||||||||||    
T  289 taggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcca 232  T

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Target: scaffold0586 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 6399 - 6346
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 158  Q
    |||||||| ||||||| |||||||| |||||||||||  ||||| |||||||||    
T  6399 tagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

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Target: scaffold0150 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 5965 - 5916
Alignment:
Q  31 catatttcccttatgttatggggtt-aaaagagcatatttccctaaacat 79  Q
    |||||||||||||||||| |||| | |||| |||||||||||||||||||    
T  5965 catatttcccttatgttaggggggtcaaaatagcatatttccctaaacat 5916  T

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Target: scaffold0150; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 6078 - 6134
Alignment:
Q  105 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 161  Q
    |||||||||||||||||||| ||| ||||| || |||| ||||| | ||||||||||    
T  6078 tagggggccaaaatcgcaacatttaaaaacatagggggcgaaaagtacactttagcc 6134  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 35263 - 35304
Alignment:
Q  50 ggggttaaaagagcatatttccctaaacatggggtcactttt 91  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||    
T  35263 ggggtcaaaagagtatatttccctaaacatgggatcactttt 35304  T

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Target: scaffold0406 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 75
Target Start/End: Complemental strand, 2120 - 2080
Alignment:
Q  35 tttcccttatgttatggggttaaaagagcatatttccctaa 75  Q
    |||||||||||||| | ||| ||||||||||||||||||||    
T  2120 tttcccttatgttaggaggtcaaaagagcatatttccctaa 2080  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 66307 - 66259
Alignment:
Q  31 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 79  Q
    |||| ||||||||||||| | ||| |||| |||||||||||||||||||    
T  66307 catagttcccttatgttaggaggtcaaaatagcatatttccctaaacat 66259  T

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