View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11069A_low_229 (Length: 234)

Name: NF11069A_low_229
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11069A_low_229
NF11069A_low_229
[»] chr2 (58 HSPs)
chr2 (5-121)||(41569469-41569586)
chr2 (144-234)||(18176996-18177086)
chr2 (144-234)||(41569321-41569411)
chr2 (144-234)||(433906-433996)
chr2 (144-234)||(4952405-4952495)
chr2 (144-234)||(42223877-42223967)
chr2 (146-218)||(37257508-37257580)
chr2 (158-234)||(7552625-7552703)
chr2 (144-234)||(29051580-29051668)
chr2 (144-218)||(42678805-42678880)
chr2 (144-234)||(4758564-4758654)
chr2 (144-234)||(26738806-26738895)
chr2 (144-218)||(40937005-40937079)
chr2 (165-234)||(670397-670466)
chr2 (165-234)||(5027233-5027302)
chr2 (157-222)||(20911870-20911935)
chr2 (144-228)||(7574491-7574575)
chr2 (144-228)||(10711780-10711864)
chr2 (144-218)||(6999009-6999083)
chr2 (144-218)||(28245784-28245857)
chr2 (144-234)||(31389603-31389693)
chr2 (144-218)||(39213711-39213785)
chr2 (144-230)||(42866806-42866892)
chr2 (7-60)||(41588523-41588576)
chr2 (144-229)||(44711919-44712004)
chr2 (154-218)||(32869892-32869956)
chr2 (154-229)||(28244171-28244245)
chr2 (144-218)||(2221049-2221123)
chr2 (156-234)||(5200151-5200228)
chr2 (144-218)||(6170686-6170760)
chr2 (144-218)||(25881600-25881674)
chr2 (144-218)||(35705550-35705623)
chr2 (181-234)||(17779475-17779528)
chr2 (157-218)||(18876862-18876923)
chr2 (145-234)||(29879899-29879988)
chr2 (144-181)||(36802952-36802989)
chr2 (144-200)||(42532697-42532754)
chr2 (154-234)||(2464175-2464254)
chr2 (156-200)||(6941011-6941055)
chr2 (145-192)||(26277152-26277199)
chr2 (144-194)||(4139272-4139322)
chr2 (144-218)||(5054664-5054738)
chr2 (144-218)||(9377512-9377586)
chr2 (144-218)||(9634377-9634451)
chr2 (144-194)||(13347780-13347830)
chr2 (144-218)||(15269917-15269991)
chr2 (144-218)||(29712034-29712108)
chr2 (144-178)||(34119633-34119667)
chr2 (144-218)||(35589328-35589402)
chr2 (144-178)||(38560734-38560768)
chr2 (144-201)||(42372535-42372593)
chr2 (144-201)||(18723650-18723707)
chr2 (158-218)||(2131497-2131557)
chr2 (158-234)||(4753231-4753306)
chr2 (157-193)||(13711332-13711368)
chr2 (156-200)||(17999636-17999680)
chr2 (158-234)||(28679387-28679462)
chr2 (144-199)||(40700251-40700307)
[»] chr5 (42 HSPs)
chr5 (144-234)||(5042304-5042394)
chr5 (154-234)||(2688911-2688991)
chr5 (144-222)||(18842258-18842336)
chr5 (144-234)||(35098930-35099020)
chr5 (144-228)||(6930990-6931074)
chr5 (144-234)||(16437489-16437580)
chr5 (144-234)||(4430861-4430951)
chr5 (144-234)||(8267745-8267835)
chr5 (154-218)||(33620674-33620738)
chr5 (144-234)||(5821536-5821627)
chr5 (144-234)||(37700516-37700605)
chr5 (144-222)||(21064163-21064241)
chr5 (157-234)||(23126266-23126342)
chr5 (144-218)||(9581635-9581709)
chr5 (144-218)||(43441794-43441868)
chr5 (144-229)||(20770187-20770272)
chr5 (154-218)||(15267850-15267914)
chr5 (144-228)||(18397096-18397180)
chr5 (158-234)||(39088794-39088869)
chr5 (144-218)||(15952986-15953060)
chr5 (144-218)||(19839927-19840001)
chr5 (144-218)||(41175647-41175721)
chr5 (144-234)||(2224846-2224937)
chr5 (155-218)||(41724256-41724319)
chr5 (144-218)||(1839286-1839360)
chr5 (144-218)||(8675374-8675448)
chr5 (144-230)||(9226357-9226442)
chr5 (144-234)||(39628845-39628935)
chr5 (144-229)||(189633-189718)
chr5 (144-201)||(6517768-6517825)
chr5 (144-229)||(19481112-19481197)
chr5 (144-200)||(43196584-43196640)
chr5 (144-228)||(43213990-43214074)
chr5 (144-218)||(3640138-3640212)
chr5 (145-179)||(6292178-6292212)
chr5 (144-218)||(10649491-10649565)
chr5 (144-218)||(15478714-15478788)
chr5 (144-178)||(21136319-21136353)
chr5 (144-218)||(34124677-34124751)
chr5 (144-218)||(38704138-38704212)
chr5 (158-199)||(17402881-17402922)
chr5 (158-234)||(42267416-42267491)
[»] chr8 (46 HSPs)
chr8 (144-234)||(45529171-45529261)
chr8 (144-234)||(1633815-1633905)
chr8 (144-234)||(7955932-7956022)
chr8 (144-234)||(11017861-11017951)
chr8 (144-234)||(16966841-16966931)
chr8 (144-234)||(11657926-11658015)
chr8 (144-234)||(36110194-36110284)
chr8 (158-234)||(32843867-32843943)
chr8 (144-234)||(7478836-7478925)
chr8 (144-232)||(30135942-30136030)
chr8 (144-234)||(35564345-35564435)
chr8 (144-222)||(40739850-40739927)
chr8 (144-234)||(7586088-7586177)
chr8 (144-234)||(37783896-37783986)
chr8 (144-218)||(41159830-41159904)
chr8 (144-222)||(41521024-41521102)
chr8 (144-234)||(7592905-7592996)
chr8 (144-234)||(1871540-1871629)
chr8 (144-218)||(30439447-30439521)
chr8 (145-234)||(32847611-32847701)
chr8 (144-234)||(33589156-33589245)
chr8 (164-234)||(34591340-34591410)
chr8 (144-234)||(36531651-36531740)
chr8 (144-201)||(38234063-38234120)
chr8 (146-217)||(13971182-13971253)
chr8 (144-230)||(2733044-2733129)
chr8 (144-199)||(4994437-4994492)
chr8 (144-228)||(16327082-16327167)
chr8 (144-229)||(31597004-31597089)
chr8 (162-231)||(39543451-39543520)
chr8 (159-234)||(888181-888257)
chr8 (158-222)||(8645234-8645298)
chr8 (144-188)||(36568014-36568058)
chr8 (144-222)||(6991745-6991823)
chr8 (144-218)||(7472968-7473041)
chr8 (144-178)||(9549180-9549214)
chr8 (144-178)||(16613690-16613724)
chr8 (144-218)||(16872097-16872171)
chr8 (144-214)||(29991468-29991537)
chr8 (144-178)||(34718171-34718205)
chr8 (145-206)||(1366657-1366718)
chr8 (144-229)||(5277634-5277719)
chr8 (158-218)||(12783835-12783895)
chr8 (145-213)||(29028907-29028975)
chr8 (158-218)||(36424543-36424603)
chr8 (158-218)||(37754632-37754691)
[»] chr7 (50 HSPs)
chr7 (144-234)||(29162901-29162991)
chr7 (144-234)||(32815224-32815314)
chr7 (144-234)||(13162975-13163065)
chr7 (144-234)||(38779669-38779759)
chr7 (144-234)||(39231653-39231743)
chr7 (144-222)||(40353320-40353398)
chr7 (144-234)||(19786004-19786094)
chr7 (144-234)||(37808689-37808779)
chr7 (157-234)||(13906382-13906459)
chr7 (145-222)||(39332042-39332119)
chr7 (144-234)||(21023042-21023132)
chr7 (144-234)||(41666847-41666937)
chr7 (157-222)||(41402577-41402642)
chr7 (144-199)||(47078211-47078266)
chr7 (144-218)||(13729782-13729856)
chr7 (149-234)||(29002669-29002752)
chr7 (144-218)||(44184500-44184574)
chr7 (145-218)||(28036801-28036874)
chr7 (145-234)||(39137209-39137298)
chr7 (149-229)||(35588821-35588901)
chr7 (162-230)||(41026132-41026199)
chr7 (144-229)||(10055562-10055647)
chr7 (158-234)||(26041245-26041320)
chr7 (144-218)||(18111552-18111627)
chr7 (144-231)||(20482583-20482670)
chr7 (175-234)||(46773589-46773648)
chr7 (144-214)||(11564949-11565018)
chr7 (144-218)||(21822540-21822614)
chr7 (145-231)||(31844533-31844619)
chr7 (144-218)||(35452514-35452588)
chr7 (144-234)||(36019473-36019562)
chr7 (144-218)||(43573484-43573558)
chr7 (145-218)||(3062387-3062460)
chr7 (144-201)||(21559854-21559911)
chr7 (145-229)||(16980354-16980437)
chr7 (144-200)||(33180669-33180725)
chr7 (145-234)||(27163585-27163673)
chr7 (144-218)||(39029914-39029989)
chr7 (147-234)||(39823868-39823954)
chr7 (144-218)||(7817693-7817766)
chr7 (144-218)||(11352915-11352989)
chr7 (144-193)||(35600727-35600777)
chr7 (144-178)||(40231687-40231721)
chr7 (144-218)||(41399104-41399178)
chr7 (144-178)||(46532558-46532592)
chr7 (144-178)||(47495026-47495060)
chr7 (149-218)||(4713634-4713703)
chr7 (149-218)||(12645851-12645920)
chr7 (154-218)||(25067289-25067353)
chr7 (158-218)||(46829549-46829609)
[»] chr4 (61 HSPs)
chr4 (144-234)||(41486068-41486158)
chr4 (144-234)||(36111320-36111411)
chr4 (144-234)||(6141703-6141793)
chr4 (144-234)||(21260354-21260444)
chr4 (144-234)||(30079902-30079992)
chr4 (145-234)||(42959328-42959418)
chr4 (145-234)||(51746277-51746366)
chr4 (144-234)||(33899251-33899341)
chr4 (144-219)||(624252-624327)
chr4 (144-234)||(5932083-5932172)
chr4 (144-234)||(9118789-9118879)
chr4 (144-234)||(14451449-14451539)
chr4 (144-234)||(51194325-51194415)
chr4 (154-234)||(12112693-12112773)
chr4 (144-234)||(25317991-25318080)
chr4 (144-234)||(31076110-31076199)
chr4 (144-234)||(41082374-41082463)
chr4 (169-234)||(50272998-50273063)
chr4 (158-234)||(35820241-35820317)
chr4 (154-234)||(53152246-53152326)
chr4 (144-234)||(47965795-47965883)
chr4 (144-234)||(26206902-26206992)
chr4 (157-234)||(17475946-17476022)
chr4 (144-229)||(39344910-39344995)
chr4 (144-234)||(439185-439275)
chr4 (144-218)||(28657382-28657456)
chr4 (144-234)||(37066044-37066133)
chr4 (144-229)||(28458307-28458392)
chr4 (158-234)||(48536366-48536444)
chr4 (144-234)||(54669509-54669598)
chr4 (144-229)||(26718424-26718509)
chr4 (144-229)||(26731052-26731137)
chr4 (145-229)||(13263328-13263411)
chr4 (144-188)||(30169991-30170035)
chr4 (144-218)||(2999168-2999242)
chr4 (144-218)||(14010059-14010133)
chr4 (144-218)||(46405915-46405989)
chr4 (144-222)||(48335610-48335688)
chr4 (144-218)||(49896607-49896681)
chr4 (144-214)||(51573577-51573647)
chr4 (146-218)||(27326693-27326765)
chr4 (156-234)||(2256256-2256333)
chr4 (154-200)||(6494852-6494898)
chr4 (144-218)||(13086078-13086152)
chr4 (144-218)||(18882916-18882990)
chr4 (144-178)||(21617239-21617273)
chr4 (144-218)||(22819705-22819779)
chr4 (144-218)||(31657702-31657776)
chr4 (144-218)||(38338863-38338937)
chr4 (144-218)||(43769767-43769841)
chr4 (144-214)||(45851816-45851885)
chr4 (157-218)||(12138922-12138983)
chr4 (144-229)||(13139204-13139289)
chr4 (154-234)||(23822173-23822250)
chr4 (145-201)||(34995377-34995434)
chr4 (158-218)||(33860716-33860776)
chr4 (158-218)||(37514073-37514133)
chr4 (145-201)||(49768276-49768332)
chr4 (159-234)||(54802600-54802676)
chr4 (144-188)||(55601672-55601716)
chr4 (158-218)||(56271430-56271490)
[»] chr3 (52 HSPs)
chr3 (144-234)||(390865-390955)
chr3 (144-234)||(37508423-37508513)
chr3 (144-234)||(44677409-44677499)
chr3 (144-232)||(39020086-39020174)
chr3 (144-234)||(10206898-10206988)
chr3 (144-234)||(49363176-49363266)
chr3 (144-234)||(32767732-32767822)
chr3 (149-234)||(30909090-30909175)
chr3 (144-231)||(28419142-28419229)
chr3 (144-234)||(11633669-11633759)
chr3 (144-218)||(33375916-33375990)
chr3 (144-234)||(43905029-43905119)
chr3 (144-218)||(8821686-8821760)
chr3 (144-234)||(22371247-22371337)
chr3 (144-234)||(39671022-39671112)
chr3 (145-234)||(36121878-36121967)
chr3 (157-234)||(54773678-54773755)
chr3 (154-234)||(29633997-29634077)
chr3 (144-234)||(46982828-46982918)
chr3 (144-218)||(49417631-49417704)
chr3 (144-218)||(54027998-54028072)
chr3 (145-234)||(54195396-54195486)
chr3 (165-234)||(55013079-55013148)
chr3 (144-209)||(46984582-46984647)
chr3 (144-231)||(39907474-39907561)
chr3 (144-218)||(21196180-21196254)
chr3 (144-218)||(24095347-24095421)
chr3 (144-218)||(37927146-37927220)
chr3 (144-218)||(39697163-39697237)
chr3 (144-230)||(49761363-49761449)
chr3 (144-218)||(52937239-52937313)
chr3 (144-218)||(55400055-55400129)
chr3 (147-228)||(24480382-24480463)
chr3 (144-201)||(50638309-50638366)
chr3 (144-234)||(26996372-26996461)
chr3 (144-218)||(24645412-24645486)
chr3 (144-193)||(37035491-37035541)
chr3 (144-218)||(46019518-46019592)
chr3 (144-218)||(46253678-46253752)
chr3 (154-199)||(13934562-13934607)
chr3 (144-200)||(52485528-52485585)
chr3 (158-234)||(21195816-21195891)
chr3 (144-199)||(23770705-23770758)
chr3 (167-234)||(35201465-35201531)
chr3 (144-218)||(20080129-20080202)
chr3 (144-214)||(31376711-31376780)
chr3 (144-218)||(50206911-50206985)
chr3 (144-218)||(51465855-51465929)
chr3 (144-234)||(51973293-51973383)
chr3 (144-217)||(24482905-24482978)
chr3 (144-200)||(44813406-44813463)
chr3 (149-201)||(54694071-54694123)
[»] chr1 (63 HSPs)
chr1 (144-234)||(46082046-46082136)
chr1 (144-234)||(756912-757002)
chr1 (144-234)||(902694-902784)
chr1 (144-234)||(1852876-1852966)
chr1 (144-234)||(3024675-3024765)
chr1 (144-234)||(3603167-3603257)
chr1 (144-234)||(20565043-20565133)
chr1 (144-234)||(33024496-33024586)
chr1 (144-234)||(38303613-38303703)
chr1 (144-234)||(4514379-4514469)
chr1 (144-234)||(7128174-7128264)
chr1 (144-222)||(8411655-8411733)
chr1 (144-234)||(9008281-9008371)
chr1 (144-234)||(26837508-26837598)
chr1 (144-234)||(36779194-36779284)
chr1 (144-234)||(46172332-46172422)
chr1 (145-234)||(26585804-26585893)
chr1 (144-234)||(51191844-51191934)
chr1 (144-200)||(21486276-21486332)
chr1 (144-234)||(16986994-16987083)
chr1 (144-234)||(21340578-21340667)
chr1 (144-234)||(34008236-34008325)
chr1 (144-234)||(36673657-36673746)
chr1 (144-218)||(47214264-47214337)
chr1 (144-218)||(51286309-51286382)
chr1 (144-234)||(1790564-1790654)
chr1 (144-218)||(32319251-32319324)
chr1 (144-229)||(50781500-50781585)
chr1 (154-230)||(50882039-50882115)
chr1 (144-218)||(13489718-13489792)
chr1 (144-190)||(29586049-29586095)
chr1 (144-218)||(50328082-50328156)
chr1 (144-218)||(52362538-52362612)
chr1 (144-228)||(32915003-32915087)
chr1 (154-230)||(38713636-38713712)
chr1 (144-199)||(34040460-34040515)
chr1 (144-218)||(40316885-40316959)
chr1 (144-198)||(44632584-44632638)
chr1 (144-218)||(50824797-50824871)
chr1 (144-229)||(34254281-34254366)
chr1 (146-218)||(3226001-3226073)
chr1 (154-230)||(35539202-35539278)
chr1 (154-229)||(4469358-4469433)
chr1 (144-231)||(19969490-19969577)
chr1 (144-234)||(41507119-41507210)
chr1 (144-199)||(46543402-46543457)
chr1 (144-194)||(8200131-8200181)
chr1 (144-218)||(10889987-10890061)
chr1 (144-218)||(15015454-15015528)
chr1 (144-214)||(44789089-44789158)
chr1 (144-214)||(46911349-46911418)
chr1 (144-218)||(47721465-47721539)
chr1 (144-218)||(47728457-47728531)
chr1 (144-178)||(48220125-48220159)
chr1 (144-193)||(49660235-49660285)
chr1 (144-218)||(52714842-52714916)
chr1 (144-177)||(33054070-33054103)
chr1 (154-234)||(37178769-37178850)
chr1 (145-178)||(48624933-48624966)
chr1 (144-201)||(49241463-49241520)
chr1 (159-200)||(50242382-50242423)
chr1 (154-218)||(24673132-24673195)
chr1 (144-207)||(48261195-48261259)
[»] scaffold0471 (1 HSPs)
scaffold0471 (144-234)||(63-153)
[»] chr6 (29 HSPs)
chr6 (144-234)||(2075376-2075466)
chr6 (144-234)||(2777242-2777331)
chr6 (144-222)||(3610898-3610976)
chr6 (144-218)||(11547470-11547544)
chr6 (144-234)||(34504076-34504166)
chr6 (157-234)||(14986669-14986746)
chr6 (156-234)||(30036719-30036797)
chr6 (144-222)||(4820307-4820387)
chr6 (157-234)||(5327516-5327593)
chr6 (144-234)||(335119-335207)
chr6 (144-234)||(30152455-30152545)
chr6 (145-230)||(14693181-14693266)
chr6 (144-234)||(13658888-13658977)
chr6 (144-229)||(35213491-35213576)
chr6 (144-218)||(754379-754453)
chr6 (144-234)||(3199016-3199105)
chr6 (144-218)||(14699605-14699679)
chr6 (144-234)||(22341100-22341189)
chr6 (144-201)||(20822826-20822883)
chr6 (157-218)||(32459457-32459518)
chr6 (144-179)||(6531163-6531198)
chr6 (144-193)||(10335606-10335656)
chr6 (144-218)||(13143323-13143397)
chr6 (144-178)||(32046754-32046788)
chr6 (144-214)||(33421816-33421885)
chr6 (158-199)||(23628429-23628470)
chr6 (144-201)||(24842424-24842480)
chr6 (158-218)||(1369430-1369490)
chr6 (144-200)||(26832702-26832758)
[»] scaffold0449 (1 HSPs)
scaffold0449 (145-234)||(9260-9349)
[»] scaffold0014 (1 HSPs)
scaffold0014 (144-231)||(122887-122973)
[»] scaffold0687 (1 HSPs)
scaffold0687 (144-234)||(2253-2344)
[»] scaffold0532 (1 HSPs)
scaffold0532 (144-230)||(11020-11106)
[»] scaffold0321 (1 HSPs)
scaffold0321 (144-222)||(19692-19770)
[»] scaffold0136 (1 HSPs)
scaffold0136 (144-229)||(38481-38566)
[»] scaffold1956 (1 HSPs)
scaffold1956 (144-218)||(825-900)
[»] scaffold0010 (1 HSPs)
scaffold0010 (144-217)||(134245-134318)
[»] scaffold0204 (1 HSPs)
scaffold0204 (144-222)||(23132-23210)
[»] scaffold0416 (1 HSPs)
scaffold0416 (144-193)||(6914-6963)


Alignment Details
Target: chr2 (Bit Score: 106; Significance: 3e-53; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 41569586 - 41569469
Alignment:
Q  5 agaagtggactaa-tcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtcaaaattaacaatgaa 103  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41569586 agaagtggactaaatcattgttgtgtcatgtgtggcaaatattcattttgttgtacactactcttgatgatgatttttacacgtgaaaattaacaatgaa 41569487  T
Q  104 tttaattaaggtccattt 121  Q
    ||||||||||||||||||    
T  41569486 tttaattaaggtccattt 41569469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 18176996 - 18177086
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||  ||||||||||    
T  18176996 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaata 18177086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 41569411 - 41569321
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  41569411 catactcacgttactttttactttatctctctattgctatggtttccgtaccaataccacttttttctttgtaaaatatggttgtcaaata 41569321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 433906 - 433996
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| | ||||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  433906 catactcacatcattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 433996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 4952495 - 4952405
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||| |||||||||||   |||||||||||||||||||| || |||||||    
T  4952495 catattcacattattttttactttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaata 4952405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 42223967 - 42223877
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||| ||||||| ||||||  ||||||||||||| ||||||| |||||||||||||||||||||||||| |||||    
T  42223967 catactcacattaatttttattttatctttctattgttatggtttccgtgtcaataccacttttttctttgtaaaatataattgttaaata 42223877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 146 - 218
Target Start/End: Original strand, 37257508 - 37257580
Alignment:
Q  146 tactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||| ||||||||||||||||    
T  37257508 tactcacattattttttactttatctctctattgctatggtttccatgacaataccacttttttctttgtaaa 37257580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 7552625 - 7552703
Alignment:
Q  158 tttttactttatctctctattactatggt--ttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||| || ||||||||||||||||| |||||||||||    
T  7552625 tttttattttatctctctattactatggtgtttccgtgccaataccactattttctttgtaaaatatgattgtcaaata 7552703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 29051668 - 29051580
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || ||||||||||||||  ||||||||| |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  29051668 catacttacattattttttacttt--ctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 29051580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 42678805 - 42678880
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-ccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||  ||||||||||||||||    
T  42678805 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacttttttctttgtaaa 42678880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 4758654 - 4758564
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| |||||||||| |||||||||||||| ||||| |||||||||||||| | ||||||||||| |||| ||| ||| |||||||    
T  4758654 catattcacattattttttattttatctctctattgctatgatttccgtgccaatatcacttttttctttataaagtatgattatcaaata 4758564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 26738895 - 26738806
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || |||||||||| |||||||||||||| |||||||||| |||||||||   | |||||||||||||||||| |||||||||||    
T  26738895 catacttacattattttttattttatctctctattgctatggtttctgtgccaatattac-tttttctttgtaaaatatgattgtcaaata 26738806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 40937079 - 40937005
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  40937079 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaa 40937005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 670466 - 670397
Alignment:
Q  165 tttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||| ||||| |||||||| |||||||  |||||||||||||||||||  ||||||||||    
T  670466 tttatctctctattgctatgatttccgtgtcaataccatttttttctttgtaaaatatggttgtcaaata 670397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 5027233 - 5027302
Alignment:
Q  165 tttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||| ||||||||| |||||||||||   |||||||||||||||||||| || |||||||    
T  5027233 tttatctctctattgctatggttttcgtgccaatacaatttttttctttgtaaaatatatttatcaaata 5027302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 20911870 - 20911935
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||||||||||||||||||||| || |||||||||||| |||| |  |||||||||||||||||||    
T  20911870 ttttttactttatctctctattgctttggtttccgtgcaaatatctattttttctttgtaaaatat 20911935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 7574491 - 7574575
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    |||||||||  ||||||||||||||||||||||||||| || ||| ||||| ||||||  ||||||| ||||||| |||| ||||    
T  7574491 catactcacaatattttttactttatctctctattactttgattttcgtgcaaatacctattttttccttgtaaattatagttgt 7574575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Original strand, 10711780 - 10711864
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  ||||||  ||||||||||||||| ||| |||||    
T  10711780 catactcacattactttttactttatctctctattgctttggttttcgtgtaaatacctattttttctttgtaaattatgattgt 10711864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 6999083 - 6999009
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||| ||||    
T  6999083 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 6999009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 28245784 - 28245857
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| |||| ||  ||||||||||||||    
T  28245784 catactcacattattttttactttatctctctattgctttggttttcgtgcaaata-cctatttttctttgtaaa 28245857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 31389603 - 31389693
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||| ||||||| || |||||  ||||||||||||| ||||||  |||||||||||||||  |||  ||||||||||    
T  31389603 catactcacattatttttaactttatttccctattgttatggtttccgtgacaatactacttttttctttgtaagttatggttgtcaaata 31389693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 39213785 - 39213711
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || | |||| ||||| ||||||   ||||||||||||||    
T  39213785 catactcacattattttttactttatctctctattcctttagttttcgtgcaaataccaactttttctttgtaaa 39213711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 42866806 - 42866892
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| |||| ||  |||||||||||||| ||| |||||||    
T  42866806 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatatccactttttctttgtaaattatgattgtca 42866892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 41588576 - 41588523
Alignment:
Q  7 aagtggactaatcattgttgtgtcatgtgtggcaaatattcattttgttgtaca 60  Q
    ||||||||||| | |||||||||||||||||||||| |||||||||| ||||||    
T  41588576 aagtggactaacctttgttgtgtcatgtgtggcaaagattcattttggtgtaca 41588523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 44712004 - 44711919
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    |||||||||  |||||||||||||||||||||||| || || ||| ||||| ||||||  || ||||||| |||| ||||||||||    
T  44712004 catactcacactattttttactttatctctctattgctttgattttcgtgcaaatacctattctttctttataaattataattgtc 44711919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 32869892 - 32869956
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||| |||| || |||||| ||||| ||||||  |||||||||||||||    
T  32869892 ttattttttactttatctctttattgctttggttttcgtgcaaataccaattttttctttgtaaa 32869956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 28244245 - 28244171
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||||||||||||||||||| || || ||| |||| |||||||  ||||||||||| ||| ||||||||||    
T  28244245 ttattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttgcaaattataattgtc 28244171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 2221049 - 2221123
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||| |||||||||||||||| || || ||||||||| ||||||   ||||||||| ||||    
T  2221049 catactcacattatttttcactttatctctctattgctttgatttccgtgcaaatacctactttttctttataaa 2221123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 5200228 - 5200151
Alignment:
Q  156 attttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||||| | |||| ||||| |||||||||||||||  | |||||||||||||| |||  ||||||||||    
T  5200228 attttttactttatctttttattgctatgatttccgtgccaatactac-tttttctttgtaaattatggttgtcaaata 5200151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 6170686 - 6170760
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||| ||| ||||    
T  6170686 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaattttttttttataaa 6170760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 25881600 - 25881674
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||||||| || || |||||| |||   ||||||  |||||||||||||||    
T  25881600 catactcacattattttttactttatctctctgttgctttggttttcgtataaatacctattttttctttgtaaa 25881674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 35705550 - 35705623
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||| ||||||||||||||| |||| ||||||||| |||| ||||||  | ||||||||||||||    
T  35705550 catactcacattatattttactttatctctttattgctatggttttcgtgtcaatactac-tttttctttgtaaa 35705623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 17779475 - 17779528
Alignment:
Q  181 tatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  17779475 tatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 17779528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 18876923 - 18876862
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||| || |||||||||||| ||||||   ||||||||| ||||    
T  18876923 ttttttactttatctctctattgctttggtttccgtgcaaatacctactttttctttataaa 18876862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 29879899 - 29879988
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| |||||||| ||||||||||||||||  |||||||| |||| ||||||  |||||| |||| |||  |||  ||||||||||    
T  29879899 atactcacattatttttaactttatctctctattgttatggtttacgtgtcaatactactttttcctttataagttatggttgtcaaata 29879988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 36802952 - 36802989
Alignment:
Q  144 catactcactttattttttactttatctctctattact 181  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36802952 catactcacattattttttactttatctctctattact 36802989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 42532754 - 42532697
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||||||||||    
T  42532754 catactcacattatatttttactttatctctctattactttgattttcgtgccaatac 42532697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 2464254 - 2464175
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| |||||||||||||||| |||| ||||||||| ||||||  | |||||||||||||  |||  ||||||||||    
T  2464254 ttatttttaactttatctctctattgctat-gtttccgtgtcaatactacctttttctttgtaagttatggttgtcaaata 2464175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 6941011 - 6941055
Alignment:
Q  156 attttttactttatctctctattactatggtttccgtgccaatac 200  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||    
T  6941011 attttttactttatctctttattgttatggtttccgtgccaatac 6941055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 26277152 - 26277199
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgt 192  Q
    |||||||| ||||||||||||||||||||||||| || | ||||||||    
T  26277152 atactcacattattttttactttatctctctattgctttagtttccgt 26277199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 4139322 - 4139272
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgc 194  Q
    ||||||||| ||| ||||||| |||||||||||||||| |||||| |||||    
T  4139322 catactcacattaatttttaccttatctctctattactttggttttcgtgc 4139272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 5054664 - 5054738
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||| | |||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  5054664 catactcacattatgtgttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaa 5054738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 9377512 - 9377586
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |   ||||||||||||||    
T  9377512 catattcacattactttttactttatctctctattgctttggttttcgtgcaaatatctactttttctttgtaaa 9377586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 9634451 - 9634377
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||   ||||||||||||||    
T  9634451 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaaa 9634377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Complemental strand, 13347830 - 13347780
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgc 194  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||    
T  13347830 catactcacattactttttactttatctctctattgctttggttttcgtgc 13347780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 15269917 - 15269991
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  15269917 catattcacattactttttactttatctctctattgctttgattttcgtgcaaatacctactttttctttgtaaa 15269991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 29712034 - 29712108
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||   ||| ||||||   ||||||||||||||    
T  29712034 catactcacattactttttactttatctctctattgctttggtttttatgcaaatacctactttttctttgtaaa 29712108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 34119667 - 34119633
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  34119667 catactcacattattttttactttatctctctatt 34119633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 35589402 - 35589328
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| |   ||||||||||||||    
T  35589402 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaa 35589328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 38560734 - 38560768
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  38560734 catactcacattattttttactttatctctctatt 38560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 42372535 - 42372593
Alignment:
Q  144 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| ||||||| |||||||||||||||||| || || ||||||||| ||||||    
T  42372535 catactcacattatttttttactttatctctctattcctttgatttccgtgcaaatacc 42372593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 18723650 - 18723707
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| |||||||||||||||||||| |||| || || ||| ||||| ||||||    
T  18723650 catactcacattattttttactttatctctttattgctttgattttcgtgcaaatacc 18723707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 2131497 - 2131557
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||| | |||||||| || |||||||  || ||| ||||||||    
T  2131497 tttttactttatctctctattattttggtttccatgtcaatacctattatttttttgtaaa 2131557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 4753231 - 4753306
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| |||||||||||||| ||||| |||||||| ||||||  | ||||||||| |||| |||  ||||||||||    
T  4753231 tttttattttatctctctattgctatgatttccgtgtcaatactac-tttttctttataaattatggttgtcaaata 4753306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 13711368 - 13711332
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtg 193  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  13711368 ttttttactttctctctctattactttggtttccgtg 13711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 200
Target Start/End: Complemental strand, 17999680 - 17999636
Alignment:
Q  156 attttttactttatctctctattactatggtttccgtgccaatac 200  Q
    |||||||| ||||||||||||||||| || ||| |||||||||||    
T  17999680 attttttattttatctctctattactttgattttcgtgccaatac 17999636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 28679387 - 28679462
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||| ||||| ||||| || ||||||  | ||||||||| |||| |||  ||||||||||    
T  28679387 tttttactttatctctctattgctatgatttccatgtcaatactac-tttttctttataaattatggttgtcaaata 28679462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 40700251 - 40700307
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaata 199  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| |||| |||||    
T  40700251 catactcacattatatttttactttatctctctattactttgattttcgtgtcaata 40700307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 5042304 - 5042394
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  5042304 catactcacattattttttactttatctctctattactatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 5042394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 2688991 - 2688911
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  2688991 ttattttttactttatctctctattgctatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaata 2688911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 18842336 - 18842258
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||    
T  18842336 catactcacattattttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaatat 18842258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 35099020 - 35098930
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||| ||| |||||||||||    
T  35099020 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaattatgattgtcaaata 35098930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 6931074 - 6930990
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    ||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||| ||||||||| |||||    
T  6931074 catactcacattattttttactttatctctctattgctatgatttccgtgtcaataccacttttttcttcgtaaaatatgattgt 6930990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 16437580 - 16437489
Alignment:
Q  144 catactcactttatttttt-actttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| || |||||||||||||  ||||||||||||||||||||| |||||||||||||||| ||| |||||||||||    
T  16437580 catactcacattatttttttaccttatctctctattcatatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaata 16437489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 4430951 - 4430861
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| | ||||||||||||||||||||||| ||||||||| |||| ||||||| |||||||||||||||| |||  ||||||||||    
T  4430951 catactcacatcattttttactttatctctctattgctatggttttcgtgtcaataccacttttttctttgtaaagtatgcttgtcaaata 4430861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 8267835 - 8267745
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||| |||  ||||||||||||| ||||||| ||||||||||||||||  || |||||||||||    
T  8267835 catactcacattattttttactttatctctccattgttatggtttccgtgtcaataccacttttttctttgtaaagcatgattgtcaaata 8267745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 33620674 - 33620738
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  33620674 ttattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaa 33620738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 5821627 - 5821536
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-ccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || ||||||||||||||||||||||||  |||||||||||||||||||||| | ||||||||||||||| ||| ||| |||||||    
T  5821627 catacttacattattttttactttatctctctatagctatggtttccgtgccaataccactttttttctttgtaaagtatgattatcaaata 5821536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 37700516 - 37700605
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||  | |||||||||||||| |||  ||||||||||    
T  37700516 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatggttgtcaaata 37700605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 21064241 - 21064163
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| ||| ||||||||||||||| |||||  |||| |||||||| ||||||| ||||||||||||||||||||    
T  21064241 catactcacattactttttactttatctccctattgttatgatttccgtgtcaataccacttttttctttgtaaaatat 21064163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 23126342 - 23126266
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| |||||||||||||  ||||||||||||||||| | | |||||||||||||||| |||||||||||||||    
T  23126342 ttttttacgttatctctctattgttatggtttccgtgccaa-atcacttttttctttgtaaagtataattgtcaaata 23126266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 9581635 - 9581709
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||   ||||||||||||||    
T  9581635 catactcacattattttttactttatctctctattgttttggtttccgtgcaaatacctactttttctttgtaaa 9581709  T

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Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 43441794 - 43441868
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||||||||    
T  43441794 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaa 43441868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 20770187 - 20770272
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||| ||| ||||||    
T  20770187 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 20770272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 15267850 - 15267914
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||||||  |||||||| |||| ||||| | ||||||||||||||||    
T  15267850 ttattttttactttatctctctattgttatggttttcgtgtcaatatcacttttttctttgtaaa 15267914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 18397180 - 18397096
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    |||||| || ||| |||||| |||||||||||||| || |||||| ||||| ||||||  ||||||||||||||| |||||||||    
T  18397180 catacttacattactttttattttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaattataattgt 18397096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 39088869 - 39088794
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||||||||||  |||||||||| || ||||| || |||||||||||||||||||  ||||||||||    
T  39088869 tttttactttatctctctattgatatggtttccatgtcaata-cctttttttctttgtaaaatatcgttgtcaaata 39088794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 15953060 - 15952986
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||  ||||||||||||||||||||||||| || || ||| ||||| |||||||  ||||||||||||||    
T  15953060 catactcatattattttttactttatctctctattgctttgattttcgtgcaaatacccactttttctttgtaaa 15952986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 19840001 - 19839927
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| |||| |  |||||||||||||||    
T  19840001 catactcacattattttttactttatatctctattgctttggttttcgtgcaaatatcaattttttctttgtaaa 19839927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 41175721 - 41175647
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || || | | ||||| |||||||  ||||||||||||||    
T  41175721 catactcacattattttttactttatctctctattgctttgatcttcgtgcaaatacccactttttctttgtaaa 41175647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 2224846 - 2224937
Alignment:
Q  144 catactcactttattttt--tactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || ||||||||  |||||||||||| |||||||||| |||||||||||||||  | |||||||||||||| |||  ||||||||||    
T  2224846 catacttacattatttttcgtactttatctctttattactatgttttccgtgccaatactac-tttttctttgtaaattatggttgtcaaata 2224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 218
Target Start/End: Original strand, 41724256 - 41724319
Alignment:
Q  155 tattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||||||||| ||||||||| | |||||||||||  ||||||  |||||||||||||||    
T  41724256 tattttttactttatttctctattattttggtttccgtgtaaatacctattttttctttgtaaa 41724319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 1839360 - 1839286
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||| ||||||  | |||||| ||||| |||| |  |||||||||||||||    
T  1839360 catactcacattattttttactttatctttctattgttttggttttcgtgcaaatatctattttttctttgtaaa 1839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 8675448 - 8675374
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  8675448 catactcacattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 8675374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 9226357 - 9226442
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    ||||||||| ||||||| |||||||||||||||||  | || ||||||||| |||||    |||||||||||||| |||||||||||    
T  9226357 catactcacattatttt-tactttatctctctattgttttgatttccgtgcaaatacttactttttctttgtaaattataattgtca 9226442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 39628845 - 39628935
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| |||||||| ||||||||| ||||||  ||||||||  ||||||||||   |||||||||| |||| ||| |||||||||||    
T  39628845 catattcacattatttttaactttatctttctattgttatggtttttgtgccaatactatttttttctttataaattatgattgtcaaata 39628935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 189718 - 189633
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |   ||||||||| |||| ||| ||||||    
T  189718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaactttttctttataaattatgattgtc 189633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 6517768 - 6517825
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||    
T  6517768 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacc 6517825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 19481197 - 19481112
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| |||||||||||||||||||||  | |||| | ||||| ||||||   |||||||||||||| |||| |||||    
T  19481197 catactcacattactttttactttatctctctattgttttggtcttcgtgcaaataccaactttttctttgtaaattatagttgtc 19481112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 43196640 - 43196584
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| |||||    
T  43196640 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatac 43196584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 43214074 - 43213990
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||  |||||||||| |||| |||| ||||    
T  43214074 catactcacattactttttactttatctctttattgttttggttttcgtgcaaatacctattttttctttataaattatagttgt 43213990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 3640212 - 3640138
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||| |||||| || || ||| | ||| |||||||  ||||||||| ||||    
T  3640212 catactcacattattttttactttatctttctattgctttgattttcatgcaaatacccactttttctttataaa 3640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 179
Target Start/End: Original strand, 6292178 - 6292212
Alignment:
Q  145 atactcactttattttttactttatctctctatta 179  Q
    |||||||| ||||||||||||||||||||||||||    
T  6292178 atactcacattattttttactttatctctctatta 6292212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 10649491 - 10649565
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  |||||   ||||||||||||||    
T  10649491 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaa 10649565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 15478714 - 15478788
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||| |||  | |||||| ||||| |||| |   ||||||||||||||    
T  15478714 catactcacattattttttactttatctctcaattgttttggttttcgtgcaaatatcaactttttctttgtaaa 15478788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 21136319 - 21136353
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  21136319 catactcacgttattttttactttatctctctatt 21136353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 34124677 - 34124751
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||| |||||||| || |||||| ||||  ||||||   ||||||||||||||    
T  34124677 catactcacattactttttactttatttctctattgctttggttttcgtgtaaataccaactttttctttgtaaa 34124751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 38704212 - 38704138
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||| | |||||| || || ||| ||||| ||||||   ||||||||||||||    
T  38704212 catactcacattattttttactttatttttctattgctttgattttcgtgcaaataccaactttttctttgtaaa 38704138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 17402922 - 17402881
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaata 199  Q
    ||||||||||||||||||||| ||||| |||||||| |||||    
T  17402922 tttttactttatctctctattgctatgatttccgtgtcaata 17402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 42267416 - 42267491
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||||||||||  |||| |||||||| ||||| |  |||||||||| |||| |||  ||||||||||    
T  42267416 tttttactttatctctctattgttatgatttccgtgtcaata-ctattttttctttataaattatggttgtcaaata 42267491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 45529261 - 45529171
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  45529261 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 45529171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 1633905 - 1633815
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||| |||  ||||||||||    
T  1633905 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaata 1633815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 7956022 - 7955932
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||  ||||||||||    
T  7956022 catactcacattactttttactttatctctctattgctatggtttccgcgccaataccacttttttctttgtaaaatatggttgtcaaata 7955932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 11017861 - 11017951
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||||||||||||  ||| |||||| |||||||||| ||||||||||||||||||||| ||||||||||    
T  11017861 catactcacattattttttactttatctctctattgttatcgtttccatgccaataccacttttttctttgtaaaatatagttgtcaaata 11017951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 16966841 - 16966931
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  16966841 catactcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 16966931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 11658015 - 11657926
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| |||||||||||    
T  11658015 catactcacattactttttattttatctctctattattatggtttccgtgccaa-accacttttttctttgtaaaatatgattgtcaaata 11657926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 36110194 - 36110284
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  36110194 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaata 36110284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 32843943 - 32843867
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  32843943 tttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 32843867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 7478836 - 7478925
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||  | |||||||||||||| ||| |||||||||||    
T  7478836 catactcacattattttttaccttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaattatgattgtcaaata 7478925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 30136030 - 30135942
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaa 232  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||| ||||||| ||| ||||||||||||||||  ||||||||    
T  30136030 catattcacattactttttactttatctctttattactatggtttccgtgtcaataccacttctttctttgtaaaatatggttgtcaaa 30135942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 35564345 - 35564435
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||||| |||||| ||||  |||| ||||||||||| |||||||||||||||| |||  ||||||||||    
T  35564345 catactcacattattttttactttatctatctattgctataatttctgtgccaataccacttttttctttgtaaagtatggttgtcaaata 35564435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 40739927 - 40739850
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||| |||| |||||||||||||||||||||||||  ||||||||||||||||||| || |||||||||||||||||||    
T  40739927 catattcacattattttttactttatctctctattgttatggtttccgtgccaata-ccattttttctttgtaaaatat 40739850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 7586177 - 7586088
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||||||||||||  |||| ||||||||||||| |  | |||||||||||||| |||| ||||||||||    
T  7586177 catactcacattattttttactttatctctctattgatatgttttccgtgccaatgctac-tttttctttgtaaattatagttgtcaaata 7586088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 37783986 - 37783896
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  ||| ||||||||||||||||||||| ||| | |||||||| ||||||| | ||||||||||||||||||  ||||||||||    
T  37783986 catactcagattactttttactttatctctctattgctaggatttccgtgtcaataccacctttttctttgtaaaatatggttgtcaaata 37783896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 41159904 - 41159830
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||||||||    
T  41159904 catactcacattattttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaa 41159830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 41521024 - 41521102
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| |||||||||||||||||||  |||| |||||||||| ||| ||||||| || |||||||||||||||||    
T  41521024 catactcacattattttttactttatctcgttattgctatggtttctgtgtcaataccactattttctttgtaaaatat 41521102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 7592905 - 7592996
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacccctt-ttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||  || |||| ||| |||| ||| |||||||||||    
T  7592905 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaata 7592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 1871629 - 1871540
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||| |||||  | |||||||||||||| |||  ||||||||||    
T  1871629 catactcacattatttttcactttatctctctattgttatggtttccgtgcgaatacaac-tttttctttgtaaattatggttgtcaaata 1871540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 30439521 - 30439447
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||| | |||||||||||||||    
T  30439521 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatactcattttttctttgtaaa 30439447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 32847701 - 32847611
Alignment:
Q  145 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| ||||||||| ||||||| ||||||||  | ||||||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  32847701 atactcacattatttttttactttatttctctattgttgtggtttccgtggcaataccacttttttctttgtaaagtatggttgtcaaata 32847611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 33589245 - 33589156
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||| |||  |||||||||||||||||||  | |||||| |||||||| ||  |||||||||||    
T  33589245 catactcacattattttttactttatctctccattgttatggtttccgtgccaata-tcattttttttttgtaaagtacgattgtcaaata 33589156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 34591340 - 34591410
Alignment:
Q  164 ctttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||| |||| |||||||||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  34591340 ctttatctctttattgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 34591410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 36531651 - 36531740
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  |||||||||||||||||||||||||  |||| |||||||||||||||  | |||||||||||||| | | |||||||||||    
T  36531651 catactcatattattttttactttatctctctattgttatgatttccgtgccaatactac-tttttctttgtaaattttgattgtcaaata 36531740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 38234063 - 38234120
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| | |||||||||||||||||||||||||| |||||||||||| ||||||    
T  38234063 catactcacataattttttactttatctctctattactttggtttccgtgcaaatacc 38234120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 146 - 217
Target Start/End: Original strand, 13971182 - 13971253
Alignment:
Q  146 tactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaa 217  Q
    ||||||| ||| |||  ||||||||||| |||| |||||||||||||||||||||  |||||||||||||||    
T  13971182 tactcacattagtttgaactttatctctatattgctatggtttccgtgccaatactacttttttctttgtaa 13971253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 2733044 - 2733129
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    ||||||||| ||||||| |||||||||||||||||| | |||||||||||| ||||||   ||||||||| |||| ||| |||||||    
T  2733044 catactcacattatttt-tactttatctctctattattttggtttccgtgcaaatacctactttttctttataaattatgattgtca 2733129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 4994437 - 4994492
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaata 199  Q
    ||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||    
T  4994437 catactcacattattttttactttatctctctattgatttggtttccgtgcaaata 4994492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 16327167 - 16327082
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatac-cccttttttctttgtaaaatataattgt 228  Q
    ||||||||| ||| |||||||||||||||||||||| | |||||| | ||| ||||| |  ||||||||||||||| |||| ||||    
T  16327167 catactcacattactttttactttatctctctattattttggttttcttgcaaatacactattttttctttgtaaattatagttgt 16327082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 31597004 - 31597089
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| |||||||||||||||||||||  | ||||||  |||| ||||||   |||||||||||||| ||| ||||||    
T  31597004 catactcacattactttttactttatctctctattgttttggtttttgtgcaaataccaactttttctttgtaaattatgattgtc 31597089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 39543520 - 39543451
Alignment:
Q  162 tactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    ||||||||||||||||| || || ||||||||| |||||   ||||||||||||||| ||| ||||||||    
T  39543520 tactttatctctctattgctttgttttccgtgcaaatacttattttttctttgtaaattatgattgtcaa 39543451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 888257 - 888181
Alignment:
Q  159 ttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaa-tataattgtcaaata 234  Q
    ||||| ||||||||||||||||| |||||| |||| ||||| |  |||||||||| ||||| |||| ||||||||||    
T  888257 ttttattttatctctctattactttggttttcgtgtcaatatctattttttctttataaaattatagttgtcaaata 888181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 8645234 - 8645298
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||||||||||||||||||||  | |||||||| ||| |||||   |||||||||||||||||||    
T  8645234 tttttactttatctctctattgttttggtttccatgcaaatacttattttttctttgtaaaatat 8645298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 36568014 - 36568058
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggttt 188  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||    
T  36568014 catactcacattattttttactttatctctctattgctttggttt 36568058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 6991823 - 6991745
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| |||||||||||||||||||||| || || ||||||  ||||  ||| |   ||||||||||||||||||    
T  6991823 catactcacattattttttactttatctctcttttgctttggtttttgtgcatataactactttttctttgtaaaatat 6991745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 7473041 - 7472968
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || | |||| ||||| |||| ||  ||||||||||||||    
T  7473041 catactcacattactttttactttatctctctattgctttagttttcgtgcaaata-cctatttttctttgtaaa 7472968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 9549214 - 9549180
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  9549214 catactcacattattttttactttatctctctatt 9549180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 16613690 - 16613724
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  16613690 catactcacattattttttactttatctctctatt 16613724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 16872171 - 16872097
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||| |   ||||||||||||||    
T  16872171 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaa 16872097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 29991468 - 29991537
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  29991468 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 29991537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 34718171 - 34718205
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  34718171 catactcacattattttttactttatctctctatt 34718205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 206
Target Start/End: Original strand, 1366657 - 1366718
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttt 206  Q
    |||||||  |||||||||||||||||||| |||| ||||| |||||||  ||||||| ||||    
T  1366657 atactcaaattattttttactttatctctttattgctatgatttccgtatcaataccacttt 1366718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 5277719 - 5277634
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| |||||||||| |||||||||||||| || || ||| ||||| |||||   || |||||||| ||| ||| ||||||    
T  5277719 catactcacattattttttattttatctctctattgctttgattttcgtgcaaatacatattctttctttgcaaattatcattgtc 5277634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 12783835 - 12783895
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||  | |||||||||| | ||||||  |||||||||| ||||    
T  12783835 tttttactttatctctctattgttttggtttccgtacaaatacctattttttctttataaa 12783895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 29028975 - 29028907
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttcttt 213  Q
    |||||||| |||||||||| |||||||||||||| || || |||  |||| ||||||  ||||||||||    
T  29028975 atactcacattattttttaatttatctctctattgctttgatttttgtgcaaatacctattttttcttt 29028907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 36424603 - 36424543
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||  | |||||||||||| |||||   |||||||||| ||||    
T  36424603 tttttactttatctctctattgttttggtttccgtgcaaatacatattttttctttataaa 36424543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 37754632 - 37754691
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||| ||||||||||  | ||||||||||||||||| ||  ||||||||||||||    
T  37754632 tttttactttctctctctattgttttggtttccgtgccaata-cctatttttctttgtaaa 37754691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 29162991 - 29162901
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  29162991 catactcacattactttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatataattgtcaaata 29162901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 32815224 - 32815314
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||    
T  32815224 catactcacattattttttactttatctctctattgctatggtttctgtgccaataccacttttttctttgtaaaatatggttgtcaaata 32815314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 13162975 - 13163065
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  13162975 catactcatattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 13163065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 38779759 - 38779669
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  38779759 catactcacattattttttacttcatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 38779669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 39231743 - 39231653
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||| |||  ||||||||||    
T  39231743 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacctttttctttgtaaagtatggttgtcaaata 39231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 40353320 - 40353398
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  40353320 catactcacattattttttattttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 40353398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 19786094 - 19786004
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  19786094 catactcacattactttttactttatctctctattgctctggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaata 19786004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 37808779 - 37808689
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  37808779 catacttacattattttttactttatctctctattgttatgctttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 37808689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 13906459 - 13906382
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  13906459 ttttttactttatctctctattgttatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 13906382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 39332042 - 39332119
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||    
T  39332042 atactcacattactttttactttatctctctattgctatgatttccgtgccaataccacttttttctttgtaaaatat 39332119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 21023132 - 21023042
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| |||||||||||||||||||||||||  |||||||||||||  |||||| ||||||||||||||||||||  ||||||||||    
T  21023132 catattcacattattttttactttatctctctattgttatggtttccgtgataataccacttttttctttgtaaaatatggttgtcaaata 21023042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 41666937 - 41666847
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  |||||| ||||||||||||   ||||||||||||||||||||  ||||||||||    
T  41666937 catactcacattactttttactttatctctctattgttatggtgtccgtgccaatattacttttttctttgtaaaatatggttgtcaaata 41666847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 222
Target Start/End: Original strand, 41402577 - 41402642
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  41402577 tttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatat 41402642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 47078266 - 47078211
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaata 199  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  47078266 catactcacattattttttactttatctctctattgctatggtttccgtgccaata 47078211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 13729782 - 13729856
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| |  |||||| ||||| ||||||  |||||||||||||||    
T  13729782 catactcacattattttttactttatctctctattgcgttggttttcgtgcaaataccaattttttctttgtaaa 13729856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 29002669 - 29002752
Alignment:
Q  149 tcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| ||| ||||||||||||||||  | |  ||||||||||||||||||||  ||||||||||||||||||||| ||||||||||    
T  29002669 tcacattactttttactttatctct--actgttatggtttccgtgccaatacaacttttttctttgtaaaatatagttgtcaaata 29002752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 44184574 - 44184500
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||||||||    
T  44184574 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacctattttttctttgtaaa 44184500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 28036801 - 28036874
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  28036801 atactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 28036874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 39137209 - 39137298
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| |||||||| ||||||||||| |||| ||||||||||||| ||||||   |||||||||||||||  |||  ||||||||||    
T  39137209 atactcacattatttttaactttatctctatattgctatggtttccgtaccaatattacttttttctttgtaagttatggttgtcaaata 39137298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 35588901 - 35588821
Alignment:
Q  149 tcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| ||||||   |||||||||||||| ||||||||||    
T  35588901 tcacattattttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaattataattgtc 35588821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 41026132 - 41026199
Alignment:
Q  162 tactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    |||||| |||||||||| ||||||||||||| |||||||| ||||||||||||| ||||| ||||||||    
T  41026132 tactttgtctctctattgctatggtttccgtaccaataccacttttttctttgtcaaata-aattgtca 41026199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 10055647 - 10055562
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  || | ||||||   |||||||||||||| |||| |||||    
T  10055647 catactcacattattttttactttatctctctattgctttggtttttgtacaaataccaactttttctttgtaaattatagttgtc 10055562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 26041320 - 26041245
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||  | |||||||||||||| |||  ||||||||||    
T  26041320 tttttactttatctctctatttctatgatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 26041245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 18111627 - 18111552
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||| |||||||||||||||||||||||| || ||| | ||||||| ||  |||||||||||||||    
T  18111627 catactcacattatatttttactttatctctctattactttgattttcttgccaatgcctattttttctttgtaaa 18111552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 20482583 - 20482670
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    |||||||||||||||||||||||||||||||||||  | ||||||  || | ||||||  ||||||| ||||||| |||  |||||||    
T  20482583 catactcactttattttttactttatctctctattgttttggtttatgtacaaatacctattttttccttgtaaattatggttgtcaa 20482670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 234
Target Start/End: Complemental strand, 46773648 - 46773589
Alignment:
Q  175 tattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| ||||||||||||||||||||||  |||||||||| ||||||||  ||||||||||    
T  46773648 tattgctatggtttccgtgccaataccaattttttctttataaaatatggttgtcaaata 46773589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 11564949 - 11565018
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  11564949 catactcacattattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 11565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 21822614 - 21822540
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||| | ||| |||||||||||||||||||||||| || ||| ||||  ||||||  |||||||||||||||    
T  21822614 catactcgcattactttttactttatctctctattactttgattttcgtgtaaataccaattttttctttgtaaa 21822540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 31844619 - 31844533
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    |||||||| |||||||||||||||||||||||||  | ||||||  || | ||||||   |||||||||||||| |||| |||||||    
T  31844619 atactcacattattttttactttatctctctattgttttggtttttgtacaaatacctactttttctttgtaaattatagttgtcaa 31844533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 35452588 - 35452514
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| | ||||||||||||||||||||||| || || ||||||||| ||||||   ||||||||| ||||    
T  35452588 catactcacataattttttactttatctctctattgctttgatttccgtgcaaataccttctttttctttataaa 35452514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 36019473 - 36019562
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||| |||||||||||| |||| |||||||||| ||| |||||||    ||||||||||||| |||  ||||||||||    
T  36019473 catactcacattatttt-tactttatctctatattgctatggtttctgtgtcaatacctaccttttctttgtaaattatggttgtcaaata 36019562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 43573558 - 43573484
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||| ||||    
T  43573558 catattcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 43573484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 3062387 - 3062460
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||| ||| |||||||||||||||||||||  | ||||||  |||| ||||||  |||||||||||||||    
T  3062387 atactcacattactttttactttatctctctattgttttggtttttgtgcaaatacctattttttctttgtaaa 3062460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 21559854 - 21559911
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  21559854 catactcacattattttttactttatctctctattgctttgattttcgtgcaaatacc 21559911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 16980354 - 16980437
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    |||||||| ||| ||||||||||||||||||| | || |||||| || || ||||||  ||||||||||||||| ||| ||||||    
T  16980354 atactcacattactttttactttatctctcta-tgctttggttttcgggcaaataccaattttttctttgtaaattatgattgtc 16980437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 33180725 - 33180669
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| |||||||||||||||||||||||||  | |||||| ||||| |||||    
T  33180725 catactcacattattttttactttatctctctattgttttggttttcgtgcaaatac 33180669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 27163673 - 27163585
Alignment:
Q  145 atactcactttatttttt-actttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| ||||||||| |||||||||||  | | ||||  ||||| ||||||||||  |||||||||||||||||||  ||||||||||    
T  27163673 atactcacattatttttttactttatctct--actgctattatttccatgccaataccatttttttctttgtaaaatatggttgtcaaata 27163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 39029914 - 39029989
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||| |||||| ||||||||||||||||| |||||| | |||||||||   |||||| ||||||||    
T  39029914 catactcacattatgtttttaatttatctctctattactttggttttcatgccaatacttattttttatttgtaaa 39029989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 234
Target Start/End: Original strand, 39823868 - 39823954
Alignment:
Q  147 actcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| |||||||||||||||||| ||||||  |||  |||||||| ||||||  | |||||||||||||| |||  ||||||||||    
T  39823868 actcacattattttttactttatctttctattgttataatttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 39823954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 7817693 - 7817766
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||| ||||||||||||||||| || || ||| ||||| |||| ||  ||||||||||||||    
T  7817693 catactcacattatttt-tactttatctctctattgctttgattttcgtgcaaatatccactttttctttgtaaa 7817766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 11352989 - 11352915
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||  ||||||   ||||||||||||||    
T  11352989 catactcacattactttttactttatctctttattgctttggttttcgtgtaaataccaaatttttctttgtaaa 11352915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 35600727 - 35600777
Alignment:
Q  144 catactcactttatttt-ttactttatctctctattactatggtttccgtg 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  35600727 catactcacattatttttttactttttctctctattactttggtttccgtg 35600777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 40231721 - 40231687
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  40231721 catactcacattattttttactttatctctctatt 40231687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 41399178 - 41399104
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||  |||||||||||||||||||||||||  | |||||| ||||  |||||   |||||||||||||||    
T  41399178 catactcatattattttttactttatctctctattgttttggttttcgtgtaaatacttattttttctttgtaaa 41399104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 46532558 - 46532592
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  46532558 catactcacattattttttactttatctctctatt 46532592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 47495026 - 47495060
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  47495026 catactcacattattttttactttatctctctatt 47495060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 4713634 - 4713703
Alignment:
Q  149 tcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||||||||||||||||||||||||    |||||||| ||| ||||||   ||||||||||||||    
T  4713634 tcacattattttttactttatctctctattgtgttggtttccatgcaaataccttatttttctttgtaaa 4713703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 12645920 - 12645851
Alignment:
Q  149 tcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| |||| |   ||||||||||||||    
T  12645920 tcacattattttttactttatctctctattgctttgattttcgtgcaaatatcaactttttctttgtaaa 12645851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 25067289 - 25067353
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||||||  | |||||| | ||| |||||   |||||||||||||||    
T  25067289 ttattttttactttatctctctattgttttggttttcatgcaaatacattttttttctttgtaaa 25067353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 46829549 - 46829609
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   ||||||||||||||    
T  46829549 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaa 46829609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 41486158 - 41486068
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  41486158 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 41486068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 36111411 - 36111320
Alignment:
Q  144 catactcacttta-ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  36111411 catactcacattacttttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 36111320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 6141793 - 6141703
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| | |||||||||||||| |||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6141793 catactcacattactctttactttatctctttattgctatgatttccgtgccaataccacttttttctttgtaaaatataattgtcaaata 6141703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 21260354 - 21260444
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| |||||||||||||||  ||||||||||||||||||||| | |||||||||||||||||| |||||||||||    
T  21260354 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccacctttttctttgtaaaatatgattgtcaaata 21260444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 30079902 - 30079992
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  30079902 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaata 30079992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 42959328 - 42959418
Alignment:
Q  145 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  42959328 atactcacattatttttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaata 42959418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 51746277 - 51746366
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||  ||||||||||    
T  51746277 atactcacattattttttactttatctctctattgttatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaata 51746366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 33899341 - 33899251
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| |||||||||||||||  |||||||||||||||||||||  |||||||||||||||||||  ||||||||||    
T  33899341 catactcacattatttttttctttatctctctattgttatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaata 33899251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 624327 - 624252
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaa 219  Q
    ||||||||| ||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  624327 catactcacattactttttactttatctctctattgctatggttttcgtgccaataccacttttttctttgtaaaa 624252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 5932172 - 5932083
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||  |||||||||||||||||||  ||||||||||    
T  5932172 catactcacattatttttt-ctttatctttctattgctatggtttccgtgccaataccatttttttctttgtaaaatatggttgtcaaata 5932083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 9118879 - 9118789
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||||||||||||||||||||||||| ||||| ||| ||||||||||||  |||||||||||||||||||  ||||||||||    
T  9118879 cataatcacattattttttactttatctctctattgctatgattttcgtgccaataccatttttttctttgtaaaatatggttgtcaaata 9118789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 14451449 - 14451539
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||| ||||||| ||||||||||||||||||||  ||||||||||    
T  14451449 catactcacattagtttttactttatctctctattgttatggttttcgtgtcaataccacttttttctttgtaaaatatggttgtcaaata 14451539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 51194325 - 51194415
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| | | |||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  51194325 catactcacatcactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaata 51194415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 12112693 - 12112773
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  12112693 ttattttttactttatctctctattgctatgatttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 12112773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 25318080 - 25317991
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  |||||||||||||||||||| |||| || ||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  25318080 catactcatattattttttactttatctctttattgct-tggtttccgtgtcaataccacttttttctttgtaaaatatggttgtcaaata 25317991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 31076110 - 31076199
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||| |||  ||||||||||    
T  31076110 catactcacatcattttttactttatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 31076199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 41082374 - 41082463
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||| |||| ||||||  | |||||||||||||| |||||||||||||||    
T  41082374 catactcacattatttttcactttatctctctattactatgattttcgtgtcaatactac-tttttctttgtaaattataattgtcaaata 41082463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 50273063 - 50272998
Alignment:
Q  169 tctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  50273063 tctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 50272998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 35820241 - 35820317
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||| ||||||||||| |||| ||||||| |||||||| |||||||||||||||| |||| ||||||||||    
T  35820241 tttttactttttctctctattattatgatttccgtaccaataccacttttttctttgtaaactatagttgtcaaata 35820317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 53152326 - 53152246
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||||||||| ||||  ||||||||| ||||||||||| |||||||||||||||| |||  ||||||||||    
T  53152326 ttattttttactttatctctatattgttatggtttctgtgccaataccacttttttctttgtaaagtatggttgtcaaata 53152246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 47965795 - 47965883
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||  |||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  47965795 catactcacattactttttactttatctct--attgatatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaata 47965883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 26206992 - 26206902
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||| |||||||||||||||||||||  ||||||||| ||| || |||| ||||||||||||||||||||  ||||||||||    
T  26206992 catattcacattactttttactttatctctctattgttatggtttctgtgtcagtaccacttttttctttgtaaaatatggttgtcaaata 26206902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 17475946 - 17476022
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||||||||||| |||||||||||||| ||||||  | |||||||||||||| ||| |||||||||||    
T  17475946 ttttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatgattgtcaaata 17476022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 39344995 - 39344910
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  ||||||||||||||| ||| ||||||    
T  39344995 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttgtaaattatgattgtc 39344910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 439275 - 439185
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||| || ||||| ||||| ||||| | | |||||| ||||||||||||||||||||  ||||||||||    
T  439275 catactcacattagtttttactttatttccctattgctatgatttccatacaaataccacttttttctttgtaaaatatggttgtcaaata 439185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 28657456 - 28657382
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||    |||||||||||||    
T  28657456 catactcacattattttttactttatctctctattgctttggtttccgtgcaaatacctacgttttctttgtaaa 28657382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 37066044 - 37066133
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| |||||||||||||||  | |||||||| ||||| | | |||||||||||    
T  37066044 catactcacattattttttactttatctctccattgctatgatttccgtgccaatactac-tttttcttagtaaattttgattgtcaaata 37066133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 28458392 - 28458307
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| |||| |||||||   |||||||||||||| ||| ||||||    
T  28458392 catactcacattattttttactttatctctctattgctttgattttcgtgtcaatacctactttttctttgtaaattatgattgtc 28458307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 48536366 - 48536444
Alignment:
Q  158 tttttactttatctc--tctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||||   ||||||||||||| ||||| |||||||||||    
T  48536366 tttttactttatctctctctattattatggtttccgtgtcaatactatttttttctttgtacaatatgattgtcaaata 48536444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 54669598 - 54669509
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || |||||||| |||||||||||||||| ||| |||||||||| ||||||  | |||||||||||||| |||  ||||||||||    
T  54669598 catacttacattatttttcactttatctctctattgctacggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 54669509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 26718424 - 26718509
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||   |||||||||||||| ||| ||||||    
T  26718424 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26718509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 26731052 - 26731137
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||   |||||||||||||| ||| ||||||    
T  26731052 catactcacattactttttactttatctctctattactttgttttttgtgcaaataccaactttttctttgtaaattatgattgtc 26731137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 229
Target Start/End: Complemental strand, 13263411 - 13263328
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    |||||||||||||||||||||||||||||||||| || || ||| |||| ||||| |  ||||||||||| ||| ||| ||||||    
T  13263411 atactcactttattttttactttatctctctattgctttgattttcgtg-caatatctattttttctttgcaaattatgattgtc 13263328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 30170035 - 30169991
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggttt 188  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||    
T  30170035 catactcacattattttttactttatctctctattgctatggttt 30169991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 2999168 - 2999242
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||||||||||||||||||||||||| || |||||| | ||| ||||||   ||||||||||||||    
T  2999168 catattcacattattttttactttatctctctattgctttggttttcatgcaaataccaactttttctttgtaaa 2999242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 14010133 - 14010059
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||  ||| |||||||||||||||||||||| | |||||| ||||| ||||||  |||||||||| ||||    
T  14010133 catactcatattactttttactttatctctctattattttggttttcgtgcaaataccaattttttctttataaa 14010059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 46405989 - 46405915
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  46405989 catactcacattaatttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 46405915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 48335610 - 48335688
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||   ||||||||||| ||||||||    
T  48335610 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 48335688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 49896681 - 49896607
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| |||||||   ||||||||||||||    
T  49896681 catagtcacattattttttactttatctctctattgctttgattttcgtgtcaataccaactttttctttgtaaa 49896607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 51573647 - 51573577
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| ||||||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||    
T  51573647 catactcacattattttttactttatctctctattgctttgattttcgtacaaatacctattttttctttg 51573577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 27326765 - 27326693
Alignment:
Q  146 tactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||| ||| |||||||||||| |||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  27326765 tactcacattactttttactttatttctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 27326693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 2256333 - 2256256
Alignment:
Q  156 attttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||||| ||||| |||||||  ||||||  | ||||| |||||||| ||| ||||| |||||    
T  2256333 attttttactttatctctctattgctatgatttccgtttcaatactac-tttttgtttgtaaattatgattgtaaaata 2256256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 6494898 - 6494852
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaatac 200  Q
    |||||||||||||||| ||||||||  ||||||||||||| ||||||    
T  6494898 ttattttttactttatttctctattgttatggtttccgtgtcaatac 6494852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 13086078 - 13086152
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||| |||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  13086078 catactcacattactttttattttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 13086152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 18882990 - 18882916
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||  || ||||||||||||||||||||| || || ||| ||| | ||||||  |||||||||||||||    
T  18882990 catactcacaatactttttactttatctctctattgctttgattttcgtacaaatacctattttttctttgtaaa 18882916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 21617239 - 21617273
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  21617239 catactcacattattttttactttatctctctatt 21617273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 22819705 - 22819779
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||| |||| || || ||| ||||| ||||||   ||||||||||||||    
T  22819705 catactcacattactttttactttatctctttattgctttgattttcgtgcaaataccaactttttctttgtaaa 22819779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 31657702 - 31657776
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||  ||||||   ||||||| ||||||    
T  31657702 catactcacattactttttactttatctctctattgctttggttttcgtgtaaataccaactttttctatgtaaa 31657776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 38338937 - 38338863
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || |||  |||| ||||||  |||||||||| ||||    
T  38338937 catactcacattactttttactttatctctctattgctttgatttttgtgcaaatacctattttttctttataaa 38338863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 43769767 - 43769841
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||||| ||||  | |  ||| ||||| |||||||  ||||||||||||||    
T  43769767 catactcacattattttttactttatctctttattgttttaattttcgtgcaaatacccactttttctttgtaaa 43769841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 45851816 - 45851885
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| | |||||||||||||||||| ||||||| || ||| |||| |||||||  |||||||||||    
T  45851816 catactcacatcattttttactttatctctttattactttgattttcgtg-caatacctattttttctttg 45851885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 12138922 - 12138983
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||||||||||||||||||| || |||  |||| ||||||   ||||||||||||||    
T  12138922 ttttttactttatctctctattactttgatttttgtgcaaatacctactttttctttgtaaa 12138983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 13139204 - 13139289
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| |||  ||||| ||||||||||||||  | |||||| ||||| ||||||   |||||||||||||| |||| |||||    
T  13139204 catactcacattaccttttaatttatctctctatttttttggttttcgtgcaaataccaactttttctttgtaaattatagttgtc 13139289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 23822250 - 23822173
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||  |||  | ||||||||||||||||| | |||||||| || ||||||||  ||||||||||    
T  23822250 ttattttttactttatctct--attgttttggtttccgtgccaatatcacttttttc-ttataaaatatggttgtcaaata 23822173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 201
Target Start/End: Original strand, 34995377 - 34995434
Alignment:
Q  145 atactcactttat-tttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    |||||||| |||| ||||||||||  |||||||||||| ||||||||||| |||||||    
T  34995377 atactcaccttatgtttttactttcactctctattactttggtttccgtgtcaatacc 34995434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 33860716 - 33860776
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||  | |||||||||||| |||||    ||||||||||||||    
T  33860716 tttttactttatctctctattgttttggtttccgtgcaaatacttactttttctttgtaaa 33860776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 37514133 - 37514073
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||||||||||||||| || || ||| |||||||| |||   ||||||||||||||    
T  37514133 tttttactttatctctctattgctttgattttcgtgccaaaacctactttttctttgtaaa 37514073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 49768332 - 49768276
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    |||||||  ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  49768332 atactcatattattttttactttatctctctattgctttgattttcgtgcaaatacc 49768276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 54802676 - 54802600
Alignment:
Q  159 ttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaa-tataattgtcaaata 234  Q
    |||||||||||||||||||| || |  ||| |||| |||||||  |||||||||| ||||| |||| ||||||||||    
T  54802676 ttttactttatctctctattgctttaattttcgtgtcaatacctattttttctttataaaactatagttgtcaaata 54802600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 55601716 - 55601672
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggttt 188  Q
    ||||||||| |||| ||||||| |||||||||||| |||||||||    
T  55601716 catactcacattatattttactatatctctctattgctatggttt 55601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 56271430 - 56271490
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||| |||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  56271430 tttttattttatctctctattgctttggttttcgtgcaaatacctactttttctttgtaaa 56271490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 390865 - 390955
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  390865 catactcacattattttttactttatctctctattgctatagtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaata 390955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 37508513 - 37508423
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  37508513 catactcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 37508423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 44677499 - 44677409
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  44677499 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 44677409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 39020174 - 39020086
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaa 232  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||    
T  39020174 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatgattgtcaaa 39020086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 10206988 - 10206898
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  10206988 catactcacattactttttactttatctctctgttgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 10206898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 49363266 - 49363176
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||    
T  49363266 catactcacattactttttactttatctctctattgatatggtttccgtgccaataccacttttttctttataaaatatagttgtcaaata 49363176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 32767732 - 32767822
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||| |||  ||||||||||    
T  32767732 catactcacattattttttactttatctctctattgctatggtttccgtgtcaatgccacttttttctttgtaaagtatggttgtcaaata 32767822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 30909090 - 30909175
Alignment:
Q  149 tcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| ||| |||||||||||||||||||||  |||||||| |||||||||||| |||||||||||||||||||| |||||||||||    
T  30909090 tcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatgattgtcaaata 30909175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 28419229 - 28419142
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    |||||| || |||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||||||||||  |||||||    
T  28419229 catacttacattattttttactttatctctctattgttatggtttccatgccaataccacttttttctttgtaaaatatggttgtcaa 28419142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 11633669 - 11633759
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| | ||||||||||||  ||||||||||    
T  11633669 catattcacattactttttactttatctctctattgctatggtttccgtgccaataccacttttctttttgtaaaatatggttgtcaaata 11633759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 33375916 - 33375990
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| ||||| ||||||||||    
T  33375916 catactcacattattttttactttatctctctattgctatagtttccgtgccaataccacttttatctttgtaaa 33375990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 43905029 - 43905119
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  ||||||||| ||| ||||||| ||||||||||||||||||||  ||||||||||    
T  43905029 catactcacattactttttactttatctctctattgttatggtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaata 43905119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 8821686 - 8821760
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| | ||||||||||||||||    
T  8821686 catactcacattattttttactttatctctctattgctatggtttctgtgtcaatatcacttttttctttgtaaa 8821760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 22371247 - 22371337
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||  ||||||||||  ||||||||||||| | ||| |||||||||||    
T  22371247 catacttacattattttttactttatctctctattgctatggtttctttgccaataccaattttttctttgtagagtatgattgtcaaata 22371337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 39671112 - 39671022
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  |||| |||||||| ||||| | ||||||||||||||||||||  ||||||||||    
T  39671112 catactcacattactttttactttatctctctattgttatgatttccgtgtcaatatcacttttttctttgtaaaatatggttgtcaaata 39671022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 36121878 - 36121967
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||| | ||||||||||||||||||  ||||||||||    
T  36121878 atactcacgttactttttactttatctctctattgctatgatttttgtgccaataccacatttttctttgtaaaatatggttgtcaaata 36121967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 54773755 - 54773678
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  54773755 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 54773678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 29634077 - 29633997
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||| |||||||||||||  |||| ||||||||| |||||| ||||||||||||||||||||  ||||||||||    
T  29634077 ttattttttacattatctctctattgatatgatttccgtgcaaataccacttttttctttgtaaaatatggttgtcaaata 29633997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 46982918 - 46982828
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  ||| ||| |||||||| |||||||| ||||  ||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  46982918 catactcatattactttctactttatatctctattgctattatttccgtgctaataccacttttttctttgtaaaatatagttgtcaaata 46982828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 49417631 - 49417704
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||  | ||||||||||||||    
T  49417631 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaa 49417704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 54027998 - 54028072
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||| || |||||||||||||||||||||||||  |||| |||||||| ||||||| ||||||||||||||||    
T  54027998 catacttacattattttttactttatctctctattgttatgatttccgtgtcaataccacttttttctttgtaaa 54028072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 54195396 - 54195486
Alignment:
Q  145 atactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||| |||| ||||| | |||||||||||||||| |||  ||||||||||    
T  54195396 atactcacattatttttttactttatctctctattactatagttttcgtgtcaatatcacttttttctttgtaaattatggttgtcaaata 54195486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 165 - 234
Target Start/End: Original strand, 55013079 - 55013148
Alignment:
Q  165 tttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||| |||||||||||||| ||||| | |||||||||||||||||||| |||||||||||    
T  55013079 tttatctctttattgctatggtttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaata 55013148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 46984647 - 46984582
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacccctttttt 209  Q
    ||||||||  ||||||| |||||||||||||||||  ||||||||||||||||||||| |||||||    
T  46984647 catactcatattattttctactttatctctctattgttatggtttccgtgccaataccactttttt 46984582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 39907561 - 39907474
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    ||||||||| |||||||||||||||| |||||||| ||||| |||||||| ||| ||  ||||||| |||||||| |||  |||||||    
T  39907561 catactcacattattttttactttatttctctattgctatgatttccgtgtcaacactacttttttttttgtaaattatggttgtcaa 39907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 21196180 - 21196254
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||| || |||||||||||||||||||||||||||| || ||| ||||| |||||   |||||||||||||||    
T  21196180 catacttacattattttttactttatctctctattactttgattttcgtgcaaatacatattttttctttgtaaa 21196254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 24095421 - 24095347
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||| |||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  24095421 catactcacattattttttactttatttctctattgctttggttttcgtgcaaatacctactttttctttgtaaa 24095347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 37927220 - 37927146
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||| | ||||||  |||||||||| ||||    
T  37927220 catactcacataattttttactttatctctctattgctttggtttccgtacaaatacctattttttctttataaa 37927146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 39697237 - 39697163
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| |||| |  |||||||||||||||    
T  39697237 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatatcaattttttctttgtaaa 39697163  T

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Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 49761363 - 49761449
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||  |||| ||||||   ||||||||| |||| ||| |||||||    
T  49761363 catactcacattattttttactttatctctctattgctttggtttttgtgcaaatacctactttttctttataaattatgattgtca 49761449  T

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Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 52937239 - 52937313
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||||||||||| || |||  |||| ||||||  |||||||||||||||    
T  52937239 catactcacattactttttactttatctctctattactttgatttttgtgcaaataccaattttttctttgtaaa 52937313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 55400055 - 55400129
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||| ||||    
T  55400055 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaa 55400129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 24480463 - 24480382
Alignment:
Q  147 actcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    |||||| |||||||||||||||||| ||||||||| ||||||  |||| ||||||   |||||||||||||| ||| |||||    
T  24480463 actcacattattttttactttatctatctattactttggtttttgtgcaaatacctactttttctttgtaaattatgattgt 24480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 50638366 - 50638309
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| | ||||||||||||||||||||||| || |||||||||||| ||||||    
T  50638366 catactcacataattttttactttatctctctattgctttggtttccgtgcaaatacc 50638309  T

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Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 26996372 - 26996461
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc-ccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||  |||||||| |||||||||||||| |||||||   |||||||  ||||||||||  ||||||||||    
T  26996372 catactcacattattttttacttta--tctctattgctatggtttccgtgtcaataccattttttttcaatgtaaaatatggttgtcaaata 26996461  T

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Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 24645412 - 24645486
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | ||||  |||||||||||||||    
T  24645412 catactcacattactttttactttatctctctattgttttggttttcgtgcaagtacctattttttctttgtaaa 24645486  T

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Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 193
Target Start/End: Complemental strand, 37035541 - 37035491
Alignment:
Q  144 catactcactttatttttt-actttatctctctattactatggtttccgtg 193  Q
    ||||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  37035541 catactcacattatttttttactttatctctctattactttggtttccgtg 37035491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 46019518 - 46019592
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||| | ||||||  | |||||||||||||    
T  46019518 catactcacattactttttactttatctctctattgctttggttttcgtacaaatacctatcttttctttgtaaa 46019592  T

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Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 46253678 - 46253752
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||    |||||||||||||    
T  46253678 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaacattttctttgtaaa 46253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 199
Target Start/End: Complemental strand, 13934607 - 13934562
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaata 199  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||    
T  13934607 ttattttttactttatttctctattgttatggtttccgtgccaata 13934562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 52485528 - 52485585
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||||||||||    
T  52485528 catactcacattatatttttactttatctctctattgctttggttttcgtgccaatac 52485585  T

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Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 21195891 - 21195816
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||  | |||| |||| |||| |||| ||||||||||    
T  21195891 tttttactttatctctctattgctatgatttccgtgtcaatactac-ttttcctttataaattatagttgtcaaata 21195816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 23770758 - 23770705
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaata 199  Q
    ||||||||||||  |||||||||| ||||||||||||| ||||||||||| |||||    
T  23770758 catactcacttt--tttttactttctctctctattactttggtttccgtgtcaata 23770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 35201531 - 35201465
Alignment:
Q  167 tatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||||| ||||||||| |||| ||||||  |||||| ||||||||| ||| |||||||||||    
T  35201531 tatctctctattgctatggttttcgtgtcaatactacttttt-ctttgtaaattatgattgtcaaata 35201465  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 20080129 - 20080202
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||   ||||||||| ||||    
T  20080129 catactcacattatttt-tactttatctctctattgttttggtttccgtgcaaatacctactttttctttataaa 20080202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 31376780 - 31376711
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  31376780 catactcacataattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 31376711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 50206985 - 50206911
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| |||| |   ||||||||||||||    
T  50206985 catactcacattactttttactttatctctctattgttttggttttcgtgcaaatatcaactttttctttgtaaa 50206911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 51465929 - 51465855
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||  ||| ||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  51465929 catactcatattactttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 51465855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 51973383 - 51973293
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || |||||||| ||||||||||||||||  ||||||||   || ||||||   ||||||||||||||| |||  ||||||||||    
T  51973383 catacttacattatttttaactttatctctctattgttatggtttttatgtcaatactatttttttctttgtaaattatggttgtcaaata 51973293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 24482978 - 24482905
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaa 217  Q
    ||||||||| ||| |||||||||||||||| ||||  | |||||| ||||| ||||||   |||||||||||||    
T  24482978 catactcacattactttttactttatctctatattgttttggttttcgtgcaaataccaactttttctttgtaa 24482905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 44813463 - 44813406
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| |||| ||||||||||||||||||||| || |||||| |||| ||||||    
T  44813463 catactcacattatatttttactttatctctctattgctttggttttcgtgtcaatac 44813406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 54694123 - 54694071
Alignment:
Q  149 tcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    |||| ||||||||||||||||||||||||| || || ||| ||||| ||||||    
T  54694123 tcacgttattttttactttatctctctattgctttgattttcgtgcaaatacc 54694071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 46082136 - 46082046
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  46082136 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatatagttgtcaaata 46082046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 756912 - 757002
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||| |||  ||||||||||    
T  756912 catactcacattattttttactttatctctctattgctatggtttccgtgccaataccatttttttctttgtaaagtatggttgtcaaata 757002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 902694 - 902784
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| ||||||||| |||||| |||||||||||||||||||| |||||||||||    
T  902694 catactcacattactttttactttatctctctattgctatgatttccgtgctaataccacttttttctttgtaaaatatgattgtcaaata 902784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 1852966 - 1852876
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  1852966 catactcacattatttttttctttgtctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 1852876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 3024765 - 3024675
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| |  ||||||||||||||||||| |||||||||||    
T  3024765 catactcatattattttttactttatctctctattgctatggtttccgtgccaatatcaattttttctttgtaaaatatgattgtcaaata 3024675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 3603167 - 3603257
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  3603167 catactcacattactttttagtttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 3603257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 20565133 - 20565043
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||  ||||||||||    
T  20565133 catactcacattactctttactttatctctctattactatggtttccgtggcaataccacttttttctttgtaaaatatggttgtcaaata 20565043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 33024586 - 33024496
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||  ||||||||||    
T  33024586 catactcacattatttttttctttatctctctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatggttgtcaaata 33024496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 38303703 - 38303613
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||||  ||||||||||    
T  38303703 catactcgcattattttttactttatctctctattgccatggtttccgtgccaataccacttttttctttgtaaaatatggttgtcaaata 38303613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 4514469 - 4514379
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| |||||||||||||||||| |||||| |||||||||||||||||||| | ||||||||||||||||||||  ||||||||||    
T  4514469 catattcacattattttttactttatctttctattgctatggtttccgtgccaatatcacttttttctttgtaaaatatgtttgtcaaata 4514379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 7128174 - 7128264
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  7128174 catattcacattattttctactttatctctctattgctatggtttccgtgccaataccacttttttctttgtaaagtatggttgtcaaata 7128264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 8411733 - 8411655
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||| ||||||||||||||||||||    
T  8411733 catactcacattattttttactttatctctctattgttttggtttccgtgccaataccacttttttctttgtaaaatat 8411655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 9008281 - 9008371
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||  |||||||||| |||||||||||||||| |||  ||||||||||    
T  9008281 catactcacattattttttactttatctctctattgccatggtttctatgccaataccacttttttctttgtaaagtatggttgtcaaata 9008371  T

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Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 26837508 - 26837598
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||| ||||| ||| ||||||| ||||||||||||||||||||  ||||||||||    
T  26837508 catactcacgttactttttactttatctctctattgctatagtttctgtgtcaataccacttttttctttgtaaaatatggttgtcaaata 26837598  T

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Target: chr1; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 36779284 - 36779194
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||| || ||| ||||||||||||||||||||| ||||| |||||||| ||||| | |||||||||||||||||||| |||||||||||    
T  36779284 catacttacattactttttactttatctctctattgctatgatttccgtgtcaatatcacttttttctttgtaaaatatgattgtcaaata 36779194  T

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Target: chr1; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 46172422 - 46172332
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||| |||||||||||||| |||| |||| |||||||||||| |||||||||||||||||| || |||| |||||    
T  46172422 catactcacattattttttattttatctctctattgctatagttttcgtgccaataccacttttttctttgtaaaatttagttgttaaata 46172332  T

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Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 26585893 - 26585804
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||| ||||||||||||||||| |||||||  ||||||||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  26585893 atactcacattattttttactttatcgctctattgttatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 26585804  T

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Target: chr1; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 51191844 - 51191934
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||  ||||||||||||||||||||  |||| ||||||||||||||||  |||||||||||||||||||  ||||||||||    
T  51191844 catactcacattacattttactttatctctctattgttatgctttccgtgccaataccatttttttctttgtaaaatatggttgtcaaata 51191934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 21486332 - 21486276
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  21486332 catactcacattattttttactttatctctctattgctatggtttccgtgccaatac 21486276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 16986994 - 16987083
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||||| |||||| ||||| |||||||| ||||||  | |||||||||||||| | |||||||||||||    
T  16986994 catactcacattattttttactttatctttctattgctatgatttccgtgtcaatactac-tttttctttgtaaattttaattgtcaaata 16987083  T

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Target: chr1; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 21340578 - 21340667
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||| |  ||||||| |||||||||||  ||||||||||    
T  21340578 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataacatttttttc-ttgtaaaatatggttgtcaaata 21340667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 34008236 - 34008325
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||  | |||||||||||||| | || ||||||||||    
T  34008236 catactcacattattttttactttatcttactattactatggtttccatgccaatactac-tttttctttgtaaattttagttgtcaaata 34008325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 36673746 - 36673657
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||||| ||||||  | |||||||||||||| |||  ||||||||||    
T  36673746 catactcatgttattttttactttatctctctattgctatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 36673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 47214264 - 47214337
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||  | ||||||||||||||    
T  47214264 catactcacattattttttactttatctctctattgttatggtttccgtgccaatactac-tttttctttgtaaa 47214337  T

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Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 51286382 - 51286309
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||  | ||||||||||||||    
T  51286382 catactcacattattttttattttatctctctattgctatggtttccgtgccaatactac-tttttctttgtaaa 51286309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 1790564 - 1790654
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  ||| ||||||||||||| |||||||  || |||||||||||||||| |  |||||||||||||||||||  ||||||||||    
T  1790564 catactcaaattactttttactttatccctctattgataaggtttccgtgccaatatcatttttttctttgtaaaatatggttgtcaaata 1790654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 32319324 - 32319251
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||| ||||||  | ||||||||||||||    
T  32319324 catactcacattatttttcacttcatctctctattactatggtttccgtgtcaatactac-tttttctttgtaaa 32319251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 50781585 - 50781500
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||  |||||||||| |||| ||| ||||||    
T  50781585 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaattttttctttataaattatgattgtc 50781500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 50882115 - 50882039
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    |||||||||||||||||||||||||||| || ||| ||||| ||||| | |||||||||| |||| ||| |||||||    
T  50882115 ttattttttactttatctctctattactttgattttcgtgcaaatactcattttttctttataaattatgattgtca 50882039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 13489718 - 13489792
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  13489718 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 13489792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 190
Target Start/End: Original strand, 29586049 - 29586095
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttcc 190  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||    
T  29586049 catactcacattattttttactttatctctctattattatggtttcc 29586095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 50328156 - 50328082
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  50328156 catactcacgttactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 50328082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 52362538 - 52362612
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||| ||||    
T  52362538 catactcacattattttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaa 52362612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 228
Target Start/End: Complemental strand, 32915087 - 32915003
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgt 228  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| ||||||   |||||||||||||| ||| |||||    
T  32915087 catactcacattactttttactttatctctctattgttttggttttcgtgcaaataccaactttttctttgtaaattatgattgt 32915003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 38713636 - 38713712
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    |||||||||||||||||||| |||| || || ||| ||||| ||||||| |||||||||| |||| ||| |||||||    
T  38713636 ttattttttactttatctctttattgctttgattttcgtgcaaatacccattttttctttataaattatgattgtca 38713712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 34040515 - 34040460
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaata 199  Q
    ||||||||| |||||||||||||||||||||||||||| || ||| ||||| ||||    
T  34040515 catactcacattattttttactttatctctctattactttgattttcgtgcaaata 34040460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 40316959 - 40316885
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||| ||||    
T  40316959 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttataaa 40316885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 44632584 - 44632638
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaat 198  Q
    ||||||||| ||||||||||||||||||||||||| |||| | ||||||| ||||    
T  44632584 catactcacattattttttactttatctctctattgctatagattccgtgtcaat 44632638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 50824797 - 50824871
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||  ||||||||||||||||||||||||| || |||||| | || |||||||   ||||||||||||||    
T  50824797 catactcatattattttttactttatctctctattgctttggttttcatgtcaatacctactttttctttgtaaa 50824871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 34254366 - 34254281
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| |||||||||||||||| |||| || |||||| ||||| |||||    |||||||||||||| |||| |||||    
T  34254366 catactcacattactttttactttatctctttattgctttggttttcgtgcaaatacaaactttttctttgtaaattatagttgtc 34254281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 218
Target Start/End: Complemental strand, 3226073 - 3226001
Alignment:
Q  146 tactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||| ||||||||||||||||||||||||| || |||||| ||| | ||||    |||||||||||||||    
T  3226073 tactcacattattttttactttatctctctattgctttggttttcgtacaaatatatattttttctttgtaaa 3226001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 35539278 - 35539202
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    |||||||||||||||||||||| ||  | |||||||||||| |||||    |||||||||||||| |||| ||||||    
T  35539278 ttattttttactttatctctctgttgttttggtttccgtgcaaatacatactttttctttgtaaattatatttgtca 35539202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 4469433 - 4469358
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||||||||||||||| ||| || ||||||| |||  |||||   ||||||||||||||| ||| ||||||    
T  4469433 ttattttttactttatctctcaattgctttggtttctgtgtaaatacatattttttctttgtaaattatgattgtc 4469358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 231
Target Start/End: Complemental strand, 19969577 - 19969490
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| |||||  |||||    ||||||||||||| |||  |||||||    
T  19969577 catactcacattactttttactttatctctctattgctttggttttcgtgcacataccaacgttttctttgtaaattatggttgtcaa 19969490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 41507210 - 41507119
Alignment:
Q  144 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||| || ||||||||||| ||||||| | |||||| | || |||||||   |||||||||||||| |||| ||||||||||    
T  41507210 catactcacattatgttcttactttatctatctattattttggttttcatgtcaatacctactttttctttgtaaattatagttgtcaaata 41507119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 199
Target Start/End: Complemental strand, 46543457 - 46543402
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaata 199  Q
    |||||||||  |||||||||||||||||||||||| || |||||| ||||| ||||    
T  46543457 catactcacactattttttactttatctctctattgctttggttttcgtgcaaata 46543402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 8200131 - 8200181
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgc 194  Q
    ||||||||| ||||||||||||||||| ||||||| || |||||| |||||    
T  8200131 catactcacattattttttactttatccctctattgctttggttttcgtgc 8200181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 10890061 - 10889987
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| |||||  |||||   ||||||||||||||    
T  10890061 catactcacattactttttactttatctctctattgctttgattttcgtgcacataccaactttttctttgtaaa 10889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 15015454 - 15015528
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||| || |||||||||||||||| ||||||||  | |||||| ||||| ||||||   ||||||||||||||    
T  15015454 catacttacattattttttactttatatctctattgttttggttttcgtgcaaataccaactttttctttgtaaa 15015528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 44789158 - 44789089
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  44789158 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 44789089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 46911349 - 46911418
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  46911349 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 46911418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 47721465 - 47721539
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    ||||||||||||||    
T  47721465 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaa 47721539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 47728457 - 47728531
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||| |||| ||||||||||||||||||||||||| || || ||| |||| ||||||    ||||||||||||||    
T  47728457 catattcacattattttttactttatctctctattgctttgattttcgtgtcaatacttactttttctttgtaaa 47728531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 48220159 - 48220125
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  48220159 catactcacattattttttactttatctctctatt 48220125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 49660235 - 49660285
Alignment:
Q  144 catactcactttatttt-ttactttatctctctattactatggtttccgtg 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  49660235 catactcacattatttttttactttctctctctattactttggtttccgtg 49660285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 52714916 - 52714842
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| |||||||||||||||||||||  | |||||| ||||| | ||||   ||||||||||||||    
T  52714916 catactcacgttactttttactttatctctctattgttttggttttcgtgcaattaccaactttttctttgtaaa 52714842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 177
Target Start/End: Complemental strand, 33054103 - 33054070
Alignment:
Q  144 catactcactttattttttactttatctctctat 177  Q
    ||||||||| ||||||||||||||||||||||||    
T  33054103 catactcacattattttttactttatctctctat 33054070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 234
Target Start/End: Original strand, 37178769 - 37178850
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaatacc-ccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||||  |||| |||| |||| |||||||||||||| ||||||| | |||||| ||| ||||||||  ||||||||||    
T  37178769 ttatttttttatttagctctttattgctatggtttccgtgtcaataccactttttttttttataaaatatggttgtcaaata 37178850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 178
Target Start/End: Original strand, 48624933 - 48624966
Alignment:
Q  145 atactcactttattttttactttatctctctatt 178  Q
    |||||||| |||||||||||||||||||||||||    
T  48624933 atactcacattattttttactttatctctctatt 48624966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 49241520 - 49241463
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| |||||||||||||||||| |||||| |  |||||| ||||| ||||||    
T  49241520 catactcacattattttttactttatctgtctattgcattggttttcgtgcaaatacc 49241463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 200
Target Start/End: Original strand, 50242382 - 50242423
Alignment:
Q  159 ttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| ||||||||||||| |||||| |||||||||||    
T  50242382 ttttactttctctctctattactttggttttcgtgccaatac 50242423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 24673132 - 24673195
Alignment:
Q  154 ttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||| |||||||||||||| || | ||||||||| ||||| |  |||||||||||||||    
T  24673132 ttattttttagtttatctctctattgctctagtttccgtgtcaata-ctattttttctttgtaaa 24673195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 48261195 - 48261259
Alignment:
Q  144 catactcactttat-tttttactttatctctctattactatggtttccgtgccaatacccctttt 207  Q
    ||||||||| |||| |||||||||| |||||||||| || ||||||  ||||||||||| |||||    
T  48261195 catactcacattatgtttttactttctctctctattgctttggtttttgtgccaatacctctttt 48261259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 63 - 153
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||| ||||||||||||||||||||  ||||||||||    
T  63 catactcacattactttttactttatctctctattgttatggttttcgtgccaataccacttttttctttgtaaaatatggttgtcaaata 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 2075466 - 2075376
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||||||||||||||||||||  ||| ||||||||||||||||| |||||||||||||||| |||  ||||||||||    
T  2075466 catactcacattattttttactttatctctctattgttatagtttccgtgccaataccacttttttctttgtaaattatggttgtcaaata 2075376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 2777331 - 2777242
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| ||||||||| ||||||||||| ||||||||||||||| |||| | ||||||||||||||||||||||||||||||||    
T  2777331 catactcacattactttttactt-atctctctattgctatggtttccgtgctaatatcacttttttctttgtaaaatataattgtcaaata 2777242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 222
Target Start/End: Complemental strand, 3610976 - 3610898
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  3610976 catactcacattactttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaaatat 3610898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 11547544 - 11547470
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||    
T  11547544 catactcacattattttttactttatctctctattgctatggtttccgtgtcaataccacttttttctttgtaaa 11547470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 34504076 - 34504166
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||| |||| |||||||||||||||| |||||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  34504076 catactcacattacttttcactttatctctctattgctatggtttccgtgtcaataccaattttttctttgtaaaatatgattgtcaaata 34504166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 14986746 - 14986669
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||| ||| |||||||||||    
T  14986746 ttttttactttatctctttattgctatggtttccgtgccaataccacttttttctttgtaaagtatgattgtcaaata 14986669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 30036797 - 30036719
Alignment:
Q  156 attttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||  ||||||||||||||| ||| |||||||||||    
T  30036797 attttttactttatctctctaatgctatggtttccgtgccaataccatttttttctttgtaaagtatgattgtcaaata 30036719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 4820307 - 4820387
Alignment:
Q  144 catactcactttattttttactttatctctctattactat--ggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| |||||||||||||||||||||||||  |||  ||||| |||||||||||| ||||||||||||||||||||    
T  4820307 catactcacattattttttactttatctctctattgttatatggttttcgtgccaataccacttttttctttgtaaaatat 4820387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 5327593 - 5327516
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||||||||||||| || |||||||||||||| ||||||| |||||||||||||||| |||  ||||||||||    
T  5327593 ttttttactttatctctctcttgctatggtttccgtgtcaataccacttttttctttgtaaagtatggttgtcaaata 5327516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 335119 - 335207
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||  |||||||| |||||||||||  ||| |||||||||||||||||||||  |||||||||||||||| ||| |||||||||||    
T  335119 catactcatattatttttaactttatctct--attgctatggtttccgtgccaatactacttttttctttgtaaattatgattgtcaaata 335207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 30152545 - 30152455
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| | ||||||||||||||||||||| | ||||||||||||| ||||||||  |||||| |||||||| |||  ||||||||||    
T  30152545 catactcacataattttttactttatctctctaatgctatggtttccgtaccaataccatttttttatttgtaaagtatggttgtcaaata 30152455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 14693266 - 14693181
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    |||||||| |||||||||||||||||||||| || || |||||||||||| ||||||   |||||||||||||| |||| ||||||    
T  14693266 atactcacattattttttactttatctctctgttgctttggtttccgtgcaaatacctactttttctttgtaaattatatttgtca 14693181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 13658888 - 13658977
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| ||||||||||||| |||||||||||  ||||||||||||| ||||||  | |||||||||||||| |||  ||||||||||    
T  13658888 catactcacattattttttacttgatctctctattgatatggtttccgtgtcaatactac-tttttctttgtaaattatggttgtcaaata 13658977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 35213576 - 35213491
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||   |||||||||||||| ||| ||||||    
T  35213576 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaattatgattgtc 35213491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 754453 - 754379
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  754453 catactcacattactttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 754379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 3199016 - 3199105
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| |||||||| | ||||||||| |||| |||||||||||||| ||||||  | ||||||||| |||| ||| |||||||||||    
T  3199016 catactcacattatttttcattttatctctatattgctatggtttccgtgtcaatactac-tttttctttataaattatgattgtcaaata 3199105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 14699679 - 14699605
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| |||||||||||||||||||||| || || |||||| ||||| ||||||   ||||||||||||||    
T  14699679 catactcacattattttttactttatctctctgttgctttggttttcgtgcaaatacctactttttctttgtaaa 14699605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 22341189 - 22341100
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||  | ||||  | |||||||||||||| |||  ||||||||||    
T  22341189 catactcacatcattttttactttatctctctattgctatggtttccgtctctatactac-tttttctttgtaaattattgttgtcaaata 22341100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 20822883 - 20822826
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||    
T  20822883 catactcacattactttttactttatctctctattgctttggttttcgtgcaaatacc 20822826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 32459518 - 32459457
Alignment:
Q  157 ttttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    |||||||||||||||||||||| || |||||| ||||| ||||||   ||||||||||||||    
T  32459518 ttttttactttatctctctattgctttggttttcgtgcaaataccaactttttctttgtaaa 32459457  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 6531198 - 6531163
Alignment:
Q  144 catactcactttattttttactttatctctctatta 179  Q
    ||||||||| ||||||||||||||||||||||||||    
T  6531198 catactcacattattttttactttatctctctatta 6531163  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 10335606 - 10335656
Alignment:
Q  144 catactcactttatttt-ttactttatctctctattactatggtttccgtg 193  Q
    ||||||||| ||||||| ||||||| ||||||||||||| |||||||||||    
T  10335606 catactcacattatttttttactttctctctctattactttggtttccgtg 10335656  T

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Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 218
Target Start/End: Complemental strand, 13143397 - 13143323
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||| ||||||||||||||||||||| || || ||| ||||| |||||    ||||||||||||||    
T  13143397 catactcacattactttttactttatctctctattgctttgattttcgtgcaaatacaaactttttctttgtaaa 13143323  T

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Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 32046754 - 32046788
Alignment:
Q  144 catactcactttattttttactttatctctctatt 178  Q
    ||||||||| |||||||||||||||||||||||||    
T  32046754 catactcacattattttttactttatctctctatt 32046788  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 214
Target Start/End: Original strand, 33421816 - 33421885
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttg 214  Q
    ||||||||| | ||||||||||||||||||||||| || || ||| |||| |||||||  |||||||||||    
T  33421816 catactcacatcattttttactttatctctctattgctttgattttcgtg-caatacctattttttctttg 33421885  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 199
Target Start/End: Original strand, 23628429 - 23628470
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaata 199  Q
    |||||||||||||||||||||| | |||||||||||| ||||    
T  23628429 tttttactttatctctctattattttggtttccgtgcaaata 23628470  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 24842424 - 24842480
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacc 201  Q
    ||||||||| ||||||| |||||||||||||||||  | |||||||||||| ||||||    
T  24842424 catactcacattatttt-tactttatctctctatttttttggtttccgtgcaaatacc 24842480  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 1369430 - 1369490
Alignment:
Q  158 tttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||||||||||||||| || || ||| ||||| ||||||   ||||||||||||||    
T  1369430 tttttactttatctctctattgctttgattttcgtgcaaataccaactttttctttgtaaa 1369490  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 200
Target Start/End: Original strand, 26832702 - 26832758
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatac 200  Q
    ||||||||| | |||||||||||||||||||||||  | |||||| ||||| |||||    
T  26832702 catactcacatcattttttactttatctctctattgttttggttttcgtgcaaatac 26832758  T

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Target: scaffold0449 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 9260 - 9349
Alignment:
Q  145 atactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaaata 234  Q
    |||||||  ||| ||||||||||||||||||||| ||||  |||||||||||||||| ||||||||||| ||||||||  ||||||||||    
T  9260 atactcatattactttttactttatctctctattgctataatttccgtgccaataccacttttttctttataaaatatggttgtcaaata 9349  T

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Target: scaffold0014 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 144 - 231
Target Start/End: Original strand, 122887 - 122973
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtcaa 231  Q
    |||||| || |||||||||||||||| |||||||| ||||||||||||||||||||||  |||||| ||||||||||||  |||||||    
T  122887 catacttacattattttttactttatttctctattgctatggtttccgtgccaataccaatttttt-tttgtaaaatatggttgtcaa 122973  T

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Target: scaffold0687 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 234
Target Start/End: Original strand, 2253 - 2344
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaatacccctt-ttttctttgtaaaatataattgtcaaata 234  Q
    |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||||||  || |||| ||| |||| ||| |||||||||||    
T  2253 catagtcacattattttttactttatctctctattgctatggtttccgtgtcaataccatttattttttttataaagtatgattgtcaaata 2344  T

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Target: scaffold0532 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 11020 - 11106
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtca 230  Q
    ||||||||| |||||||||||||||||||||||||  | || ||| ||||| |||||||  |||||||||||||| ||| |||||||    
T  11020 catactcacattattttttactttatctctctattgttttgattttcgtgcaaatacccactttttctttgtaaattatgattgtca 11106  T

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Target: scaffold0321 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 19692 - 19770
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||| ||  ||||||| ||||||||||||||||||||    
T  19692 catactcacattactctttactttatctccctatttctatggtttctgtatcaataccacttttttctttgtaaaatat 19770  T

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Target: scaffold0136 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 38481 - 38566
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatataattgtc 229  Q
    ||||||||| ||| ||||||||||||||||||||| || |||||| ||||| ||||||   |||||||||||||| |||| |||||    
T  38481 catactcacgttactttttactttatctctctattgctttggttttcgtgcgaataccaactttttctttgtaaattatagttgtc 38566  T

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Target: scaffold1956 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 144 - 218
Target Start/End: Original strand, 825 - 900
Alignment:
Q  144 catactcactttatttt-ttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaa 218  Q
    ||||||||| ||||||| ||||||||||||||||||| | |||||| ||||| |||| || |||||||||||||||    
T  825 catactcacgttatttttttactttatctctctattattttggttttcgtgcaaatatccattttttctttgtaaa 900  T

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Target: scaffold0010 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 134318 - 134245
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaa 217  Q
    ||||||||| |||||||||||||||||||| ||||  | |||||| |||| |||||||  ||||||||||||||    
T  134318 catactcacattattttttactttatctctttattgttttggttttcgtgtcaatacctattttttctttgtaa 134245  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 222
Target Start/End: Original strand, 23132 - 23210
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtgccaataccccttttttctttgtaaaatat 222  Q
    |||| |||| |||||||||||||||||| | |||| |||| |||| ||||||||||   ||||||||||| ||||||||    
T  23132 catattcacattattttttactttatctttatattgctatagttttcgtgccaatattacttttttctttataaaatat 23210  T

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Target: scaffold0416 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 6914 - 6963
Alignment:
Q  144 catactcactttattttttactttatctctctattactatggtttccgtg 193  Q
    ||||||||| |||||||||||||| ||||||||||| | |||||||||||    
T  6914 catactcacattattttttactttctctctctattaatttggtttccgtg 6963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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