View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_245 (Length: 230)
Name: NF11069A_low_245
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_245 |
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Alignment Details
Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 32060279 - 32060103
Alignment:
| Q |
1 |
attgttaggaggaattttgatacgcaaatcattagttttgataccattgttgagtcatgaggggagcccaatgaatcatcatgttggactaagagcaaac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||| |
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| T |
32060279 |
attgttaggaggaattttgatacgcaaatcattagttttgataccattgttgagtcacgaggggagcccagtaaatcatcatgttggaccaagagcaaac |
32060180 |
T |
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| Q |
101 |
actcaagtgagtcaaacactaaatctttatttaaaattttaatacattagatatatcaatcttctcatttatgtgtt |
177 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32060179 |
actcaagtgagtcaaacactagatctttatttaaaattttaatacattagatatatcaatcttctcatttatatgtt |
32060103 |
T |
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