View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_246 (Length: 230)
Name: NF11069A_low_246
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_246 |
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Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 193
Target Start/End: Original strand, 332681 - 332820
Alignment:
| Q |
54 |
gctgtatgattgttacgatgtatcaaattatcatatgcagaagttaaggaaaaagaaccatcactaattaatttccaatccaaagatcatctccattatt |
153 |
Q |
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| T |
332681 |
gctgtatgattgttacgatgtatcaaattatcatatgcagaagttaaggaaaaagaaccatcactaattaatttccaatccaaagatcatctccattatt |
332780 |
T |
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| Q |
154 |
cggatgaggaggaggcatagttgatatagactcaattata |
193 |
Q |
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| T |
332781 |
cggatgaggaggaggcatagttgatatagactcaattata |
332820 |
T |
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