View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_282 (Length: 218)
Name: NF11069A_low_282
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_282 |
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Alignment Details
Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 35154331 - 35154498
Alignment:
| Q |
29 |
aattcgaatatgtacgtaaggcttgatactgacgagcacaaggagtgatcgtcgatacataaaaaacgtacaaagagcagctactaaaagcttataaaca |
128 |
Q |
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| T |
35154331 |
aatttgaatatatacgtaagacttgatactgacgaggacaaggagtgatcgtcaatacataaaaaacgtacaaagagcagctactaaaagcttataaaca |
35154430 |
T |
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| Q |
129 |
aagggacacatatgaacgaactaaattcacacaaaaatacaagagactctaagactatacaggtatgatg |
198 |
Q |
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| T |
35154431 |
aagagacac--atgaatgaactaaattcacacaaaaatacaagagaccctaagactatacaggtatgatg |
35154498 |
T |
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