View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069A_low_36 (Length: 390)
Name: NF11069A_low_36
Description: NF11069A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069A_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 8 - 370
Target Start/End: Original strand, 37793002 - 37793364
Alignment:
| Q |
8 |
cagctgatatgttgacatgcatctcttggtaaccgcactggacatcagtgcctggtttaatttcaccctggaaatggaacatacaaagcaaatgcaaaca |
107 |
Q |
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| T |
37793002 |
cagctgatatgttgacatgcatctcttggtaaccgcactggacatcagtgcctggtttaatttcaccctggaaatggaacatacaaagcaaatgcaaaca |
37793101 |
T |
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| Q |
108 |
attacagttctttccttgatgcagaataaaatccacattaaagaacttactttctctcctgtgtctgctttggttccatgaatttttatcttggtaccag |
207 |
Q |
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| T |
37793102 |
attacagttctttccttgatgcagaataaaagccacattaaagaacttactttctctcctgtgtctgctttggttccatgaatttttatcttggtaccag |
37793201 |
T |
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| Q |
208 |
tttcctgataaatgtatgtattaaatatgaattgattaaaagattagaatttaattcagggatctctatcaaaagataggggttgcatataagaggaaga |
307 |
Q |
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| T |
37793202 |
tttcctgataaatgtatatattaaatatgaattgattaaaagattagaatttaattcagggatctctatcaaaagataggggttgcatataagaggaaga |
37793301 |
T |
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| Q |
308 |
ttagataccaacaaaatggttttaccttctccagtcgcttctgattatcaccttcagtcccat |
370 |
Q |
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| T |
37793302 |
ttagataccaacaaaatggttttaccttctccagtcgcttctgattatcaccttcagtcccat |
37793364 |
T |
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