View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11069_high_12 (Length: 383)

Name: NF11069_high_12
Description: NF11069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11069_high_12
NF11069_high_12
[»] chr5 (49 HSPs)
chr5 (1-373)||(41663513-41663893)
chr5 (63-306)||(38476524-38476781)
chr5 (9-236)||(23039949-23040181)
chr5 (70-301)||(17825559-17825793)
chr5 (77-304)||(2373149-2373380)
chr5 (63-236)||(31055369-31055547)
chr5 (63-236)||(18695075-18695252)
chr5 (78-236)||(25556945-25557108)
chr5 (69-236)||(16901058-16901229)
chr5 (69-223)||(40428700-40428857)
chr5 (69-236)||(245666-245837)
chr5 (77-238)||(34125128-34125295)
chr5 (69-228)||(37961309-37961472)
chr5 (69-236)||(26639098-26639270)
chr5 (63-236)||(16307531-16307710)
chr5 (79-224)||(36641228-36641376)
chr5 (63-236)||(38408700-38408877)
chr5 (126-306)||(20653820-20654002)
chr5 (166-306)||(23040200-23040340)
chr5 (110-308)||(35302019-35302219)
chr5 (109-236)||(7187262-7187388)
chr5 (64-224)||(10379367-10379529)
chr5 (109-238)||(23765496-23765624)
chr5 (109-238)||(23815344-23815472)
chr5 (109-224)||(10293191-10293306)
chr5 (250-306)||(31576607-31576663)
chr5 (69-224)||(19169428-19169586)
chr5 (174-224)||(8645882-8645932)
chr5 (122-227)||(17704704-17704808)
chr5 (109-225)||(462850-462966)
chr5 (248-308)||(22940665-22940725)
chr5 (126-224)||(7835795-7835891)
chr5 (258-304)||(15885132-15885178)
chr5 (258-308)||(38834085-38834135)
chr5 (250-306)||(2373393-2373449)
chr5 (255-303)||(8646002-8646050)
chr5 (251-298)||(10452709-10452756)
chr5 (251-298)||(10453121-10453168)
chr5 (259-305)||(4800935-4800981)
chr5 (248-306)||(16650898-16650956)
chr5 (248-306)||(18486945-18487003)
chr5 (248-306)||(25523069-25523127)
chr5 (248-306)||(33160329-33160387)
chr5 (249-306)||(40255716-40255773)
chr5 (250-303)||(42195137-42195188)
chr5 (176-224)||(15885335-15885383)
chr5 (250-306)||(18695250-18695306)
chr5 (116-186)||(18739837-18739909)
chr5 (250-306)||(24025021-24025077)
[»] chr7 (83 HSPs)
chr7 (10-312)||(3403051-3403360)
chr7 (6-236)||(39182008-39182242)
chr7 (32-236)||(33237437-33237645)
chr7 (67-236)||(25002780-25002952)
chr7 (67-199)||(9822159-9822294)
chr7 (67-199)||(10724084-10724219)
chr7 (2-236)||(19493392-19493629)
chr7 (126-306)||(5111442-5111621)
chr7 (139-236)||(4571478-4571575)
chr7 (69-236)||(41452310-41452482)
chr7 (69-218)||(15681720-15681873)
chr7 (39-233)||(24464651-24464851)
chr7 (63-236)||(21224407-21224585)
chr7 (63-236)||(27869250-27869428)
chr7 (69-224)||(36746564-36746722)
chr7 (69-224)||(48176024-48176181)
chr7 (69-236)||(20636690-20636861)
chr7 (70-236)||(26385332-26385503)
chr7 (61-194)||(42303261-42303398)
chr7 (118-227)||(26126336-26126445)
chr7 (69-236)||(31493982-31494153)
chr7 (63-236)||(35337577-35337755)
chr7 (69-315)||(42271324-42271575)
chr7 (69-235)||(43251338-43251509)
chr7 (79-222)||(4193637-4193783)
chr7 (63-236)||(13577841-13578017)
chr7 (82-236)||(2331084-2331243)
chr7 (10-224)||(10023785-10024003)
chr7 (78-236)||(3562503-3562665)
chr7 (69-236)||(17305836-17306008)
chr7 (69-186)||(5087118-5087239)
chr7 (67-236)||(7365292-7365468)
chr7 (69-224)||(10655415-10655572)
chr7 (63-236)||(19195268-19195446)
chr7 (69-224)||(18754327-18754485)
chr7 (137-236)||(9157183-9157281)
chr7 (63-224)||(24597571-24597734)
chr7 (14-225)||(44077876-44078091)
chr7 (10-236)||(19919603-19919834)
chr7 (109-228)||(3148004-3148123)
chr7 (16-236)||(14624676-14624899)
chr7 (166-306)||(15681595-15681740)
chr7 (69-224)||(11843239-11843396)
chr7 (80-224)||(21225621-21225766)
chr7 (136-236)||(20638562-20638663)
chr7 (132-212)||(39440248-39440328)
chr7 (77-186)||(6650632-6650745)
chr7 (116-228)||(23439674-23439787)
chr7 (116-228)||(23461132-23461245)
chr7 (80-217)||(24448114-24448256)
chr7 (250-306)||(9822314-9822370)
chr7 (250-306)||(10724239-10724295)
chr7 (249-301)||(47113373-47113425)
chr7 (174-225)||(6798083-6798134)
chr7 (70-226)||(15093813-15093970)
chr7 (67-182)||(5348153-5348273)
chr7 (136-218)||(6798014-6798095)
chr7 (137-235)||(29051693-29051789)
chr7 (63-224)||(8526881-8527044)
chr7 (5-103)||(5111619-5111720)
chr7 (251-293)||(5490517-5490559)
chr7 (8-58)||(23658771-23658821)
chr7 (250-303)||(19493564-19493617)
chr7 (116-228)||(23473070-23473183)
chr7 (248-293)||(46265878-46265923)
chr7 (109-221)||(47113202-47113315)
chr7 (201-236)||(1921004-1921039)
chr7 (256-303)||(4193556-4193603)
chr7 (250-317)||(31494158-31494225)
chr7 (248-306)||(3227637-3227695)
chr7 (255-293)||(4436132-4436170)
chr7 (249-279)||(9477447-9477477)
chr7 (120-227)||(3769486-3769593)
chr7 (195-236)||(6650614-6650655)
chr7 (251-296)||(7313081-7313126)
chr7 (250-303)||(23373669-23373722)
chr7 (258-299)||(29051634-29051675)
chr7 (250-306)||(8527042-8527098)
chr7 (250-282)||(20636643-20636675)
chr7 (250-306)||(20636866-20636922)
chr7 (250-282)||(20638515-20638547)
chr7 (250-306)||(27869196-27869252)
chr7 (250-306)||(42271580-42271636)
[»] chr1 (58 HSPs)
chr1 (75-311)||(21185203-21185440)
chr1 (14-226)||(16971933-16972151)
chr1 (12-290)||(4455043-4455332)
chr1 (63-308)||(29182055-29182304)
chr1 (69-305)||(2260439-2260677)
chr1 (79-236)||(16551714-16551877)
chr1 (14-236)||(18606688-18606917)
chr1 (63-236)||(19077980-19078157)
chr1 (63-236)||(19125870-19126047)
chr1 (69-308)||(46432277-46432522)
chr1 (69-224)||(4059583-4059741)
chr1 (110-228)||(9387773-9387893)
chr1 (69-236)||(43706715-43706886)
chr1 (78-236)||(24749869-24750032)
chr1 (69-224)||(48471924-48472082)
chr1 (69-236)||(24196332-24196504)
chr1 (69-236)||(24962024-24962196)
chr1 (166-303)||(21147980-21148121)
chr1 (63-236)||(2425296-2425473)
chr1 (16-224)||(2657518-2657731)
chr1 (78-224)||(3616884-3617033)
chr1 (14-232)||(47685178-47685401)
chr1 (79-228)||(22786111-22786260)
chr1 (137-308)||(10684792-10684965)
chr1 (69-223)||(27092913-27093070)
chr1 (63-236)||(51719177-51719354)
chr1 (69-224)||(29676164-29676322)
chr1 (7-134)||(21148122-21148255)
chr1 (250-306)||(35067047-35067103)
chr1 (250-307)||(51684365-51684422)
chr1 (257-306)||(11190385-11190434)
chr1 (250-306)||(14601740-14601796)
chr1 (251-307)||(28637106-28637162)
chr1 (248-315)||(36613947-36614014)
chr1 (257-307)||(2260377-2260427)
chr1 (250-312)||(28552299-28552361)
chr1 (250-308)||(29181999-29182057)
chr1 (79-236)||(28920727-28920884)
chr1 (167-220)||(34500409-34500462)
chr1 (250-306)||(4059522-4059578)
chr1 (258-306)||(12390034-12390082)
chr1 (250-306)||(16972098-16972154)
chr1 (250-308)||(21946642-21946700)
chr1 (251-298)||(31426161-31426208)
chr1 (258-308)||(2940264-2940313)
chr1 (248-306)||(39698563-39698621)
chr1 (257-306)||(36612853-36612902)
chr1 (250-303)||(39151934-39151987)
chr1 (250-287)||(51945541-51945578)
chr1 (249-293)||(6606956-6607000)
chr1 (116-186)||(18106819-18106891)
chr1 (250-306)||(21945708-21945763)
chr1 (250-306)||(24196509-24196565)
chr1 (250-306)||(28920899-28920955)
chr1 (248-308)||(45148579-45148639)
chr1 (250-306)||(46432216-46432272)
chr1 (256-312)||(50681655-50681711)
chr1 (254-306)||(51685814-51685866)
[»] chr4 (63 HSPs)
chr4 (14-306)||(4098657-4098957)
chr4 (9-222)||(24626220-24626438)
chr4 (69-307)||(51291230-51291473)
chr4 (14-306)||(20919338-20919632)
chr4 (69-236)||(35475362-35475532)
chr4 (63-236)||(13826474-13826651)
chr4 (82-236)||(15058892-15059051)
chr4 (39-236)||(13397703-13397908)
chr4 (69-236)||(5304408-5304579)
chr4 (63-236)||(25011806-25011984)
chr4 (39-224)||(1588443-1588631)
chr4 (69-224)||(19232404-19232563)
chr4 (69-236)||(43793692-43793864)
chr4 (69-236)||(27018286-27018457)
chr4 (63-186)||(36729143-36729270)
chr4 (16-224)||(45633522-45633735)
chr4 (75-236)||(6209306-6209474)
chr4 (69-236)||(6789019-6789191)
chr4 (79-236)||(41877099-41877259)
chr4 (21-221)||(4357340-4357545)
chr4 (195-304)||(36729247-36729357)
chr4 (127-236)||(9195787-9195896)
chr4 (78-236)||(4433253-4433416)
chr4 (82-227)||(9397273-9397421)
chr4 (139-237)||(2931391-2931490)
chr4 (119-236)||(23362504-23362621)
chr4 (69-186)||(25618689-25618809)
chr4 (127-306)||(55780387-55780567)
chr4 (127-306)||(55844567-55844747)
chr4 (109-219)||(2715821-2715930)
chr4 (109-216)||(52838321-52838427)
chr4 (109-236)||(41034707-41034836)
chr4 (250-308)||(9397437-9397495)
chr4 (63-152)||(47869811-47869903)
chr4 (248-309)||(10471431-10471492)
chr4 (67-214)||(15795412-15795562)
chr4 (116-186)||(7540200-7540272)
chr4 (171-227)||(48158678-48158734)
chr4 (250-308)||(1964486-1964544)
chr4 (250-312)||(2715963-2716025)
chr4 (249-287)||(10758741-10758779)
chr4 (250-308)||(13394534-13394592)
chr4 (69-134)||(13394597-13394665)
chr4 (250-308)||(13397673-13397731)
chr4 (250-306)||(1961172-1961228)
chr4 (250-306)||(1963196-1963252)
chr4 (250-306)||(3928903-3928959)
chr4 (250-306)||(43793631-43793687)
chr4 (263-306)||(6209227-6209270)
chr4 (248-287)||(37831611-37831650)
chr4 (252-306)||(3927666-3927720)
chr4 (259-293)||(13826280-13826314)
chr4 (253-303)||(24175936-24175986)
chr4 (248-306)||(48780248-48780306)
chr4 (258-308)||(50909726-50909776)
chr4 (195-236)||(14804423-14804464)
chr4 (14-58)||(4099046-4099090)
chr4 (253-309)||(4433433-4433488)
chr4 (250-306)||(13826420-13826476)
chr4 (248-304)||(19750618-19750673)
chr4 (248-304)||(19789133-19789188)
chr4 (250-306)||(35475291-35475347)
chr4 (249-301)||(48158800-48158852)
[»] chr3 (78 HSPs)
chr3 (21-293)||(23320380-23320654)
chr3 (63-293)||(10743422-10743657)
chr3 (69-236)||(26628086-26628258)
chr3 (14-306)||(40836183-40836482)
chr3 (80-236)||(23428691-23428852)
chr3 (69-236)||(4522025-4522197)
chr3 (69-236)||(25022724-25022896)
chr3 (78-224)||(28173799-28173948)
chr3 (69-236)||(48907353-48907525)
chr3 (116-236)||(3780952-3781071)
chr3 (63-236)||(27852807-27852984)
chr3 (69-236)||(36311223-36311394)
chr3 (69-236)||(3328874-3329046)
chr3 (69-224)||(28154943-28155101)
chr3 (69-224)||(30155206-30155364)
chr3 (69-236)||(13080965-13081137)
chr3 (78-307)||(46673117-46673351)
chr3 (63-236)||(20001780-20001958)
chr3 (69-236)||(22416403-22416577)
chr3 (69-236)||(8339001-8339173)
chr3 (78-236)||(8542681-8542844)
chr3 (64-236)||(25179649-25179824)
chr3 (14-236)||(32314992-32315218)
chr3 (137-310)||(25336354-25336527)
chr3 (9-223)||(33279584-33279803)
chr3 (68-224)||(31039037-31039196)
chr3 (69-236)||(26177017-26177187)
chr3 (14-224)||(1743334-1743550)
chr3 (122-236)||(4775922-4776038)
chr3 (9-236)||(26633359-26633589)
chr3 (63-236)||(22500650-22500828)
chr3 (250-312)||(46719935-46719997)
chr3 (63-186)||(32960698-32960823)
chr3 (69-222)||(34878590-34878746)
chr3 (166-236)||(49657942-49658011)
chr3 (63-186)||(6927593-6927719)
chr3 (32-225)||(35201017-35201214)
chr3 (69-236)||(26126967-26127137)
chr3 (176-236)||(9496388-9496448)
chr3 (69-224)||(22447801-22447963)
chr3 (254-306)||(31039241-31039293)
chr3 (120-186)||(3821004-3821071)
chr3 (63-228)||(33105022-33105190)
chr3 (123-238)||(48860771-48860888)
chr3 (196-236)||(3820986-3821026)
chr3 (252-306)||(28263158-28263212)
chr3 (175-236)||(46387744-46387806)
chr3 (248-306)||(47615591-47615649)
chr3 (156-221)||(34296531-34296596)
chr3 (250-306)||(8542858-8542914)
chr3 (250-306)||(19984849-19984905)
chr3 (250-306)||(40630627-40630683)
chr3 (250-306)||(46721265-46721321)
chr3 (250-306)||(51038835-51038891)
chr3 (250-309)||(8338937-8338996)
chr3 (251-298)||(44457445-44457492)
chr3 (250-313)||(50296199-50296262)
chr3 (171-236)||(18388866-18388932)
chr3 (268-306)||(34319346-34319384)
chr3 (183-236)||(43668511-43668565)
chr3 (248-310)||(51469968-51470030)
chr3 (262-307)||(784995-785040)
chr3 (253-318)||(4776069-4776134)
chr3 (254-303)||(8313882-8313931)
chr3 (253-306)||(8875906-8875959)
chr3 (253-306)||(19986120-19986173)
chr3 (250-283)||(25310322-25310355)
chr3 (253-306)||(36311152-36311205)
chr3 (250-306)||(1743497-1743553)
chr3 (250-282)||(4521978-4522010)
chr3 (250-306)||(20001956-20002011)
chr3 (249-301)||(21698443-21698495)
chr3 (250-282)||(25179602-25179634)
chr3 (253-285)||(26126926-26126958)
chr3 (250-306)||(26628273-26628329)
chr3 (250-306)||(26633361-26633416)
chr3 (250-306)||(28173729-28173785)
chr3 (250-286)||(28173977-28174013)
[»] scaffold0002 (2 HSPs)
scaffold0002 (75-228)||(455107-455264)
scaffold0002 (132-306)||(454929-455107)
[»] chr2 (50 HSPs)
chr2 (10-236)||(36464345-36464576)
chr2 (69-306)||(26829150-26829389)
chr2 (78-306)||(28365512-28365744)
chr2 (63-234)||(15700820-15700996)
chr2 (78-236)||(22191117-22191279)
chr2 (69-306)||(38716194-38716436)
chr2 (69-236)||(15735135-15735307)
chr2 (67-224)||(9787644-9787804)
chr2 (63-236)||(18537883-18538061)
chr2 (63-236)||(30714329-30714507)
chr2 (69-236)||(2986757-2986929)
chr2 (69-224)||(9051089-9051246)
chr2 (69-236)||(11175978-11176150)
chr2 (69-236)||(25298862-25299034)
chr2 (79-236)||(25884248-25884410)
chr2 (127-236)||(4587932-4588042)
chr2 (69-236)||(6763778-6763950)
chr2 (132-236)||(331783-331889)
chr2 (77-226)||(4104893-4105045)
chr2 (21-221)||(12350101-12350304)
chr2 (63-211)||(17368314-17368465)
chr2 (120-236)||(2190606-2190722)
chr2 (250-306)||(15700747-15700803)
chr2 (250-306)||(30714275-30714331)
chr2 (167-236)||(43301726-43301796)
chr2 (82-225)||(22387141-22387288)
chr2 (256-306)||(32677816-32677866)
chr2 (248-306)||(36449778-36449836)
chr2 (249-306)||(23048290-23048347)
chr2 (250-306)||(25884178-25884234)
chr2 (253-292)||(5819761-5819800)
chr2 (116-186)||(15147835-15147906)
chr2 (250-309)||(25298798-25298857)
chr2 (307-369)||(28543164-28543227)
chr2 (139-221)||(1020478-1020559)
chr2 (248-306)||(7899925-7899983)
chr2 (258-308)||(9051026-9051076)
chr2 (257-303)||(12350026-12350072)
chr2 (250-308)||(13830265-13830322)
chr2 (258-304)||(36464278-36464324)
chr2 (248-306)||(38840536-38840594)
chr2 (253-306)||(2190782-2190835)
chr2 (10-63)||(21773511-21773564)
chr2 (261-298)||(34257117-34257154)
chr2 (249-306)||(38839242-38839299)
chr2 (250-306)||(1034514-1034570)
chr2 (250-306)||(2986934-2986990)
chr2 (201-236)||(15147816-15147852)
chr2 (250-282)||(30793869-30793901)
chr2 (109-215)||(33199546-33199654)
[»] chr8 (65 HSPs)
chr8 (14-306)||(3207983-3208280)
chr8 (67-236)||(1824678-1824849)
chr8 (67-236)||(1859123-1859294)
chr8 (82-237)||(18252960-18253118)
chr8 (77-308)||(4423099-4423336)
chr8 (69-236)||(19391448-19391620)
chr8 (69-236)||(30784326-30784497)
chr8 (69-224)||(38630140-38630298)
chr8 (21-236)||(4518879-4519100)
chr8 (69-236)||(7117175-7117346)
chr8 (78-224)||(5192341-5192490)
chr8 (69-236)||(19924336-19924508)
chr8 (69-224)||(33895459-33895616)
chr8 (6-237)||(15869332-15869569)
chr8 (69-224)||(12723322-12723480)
chr8 (82-236)||(17648314-17648473)
chr8 (63-236)||(18881558-18881734)
chr8 (77-228)||(31268360-31268514)
chr8 (117-227)||(41688222-41688333)
chr8 (9-221)||(22452171-22452389)
chr8 (69-236)||(44147043-44147213)
chr8 (69-224)||(8802461-8802618)
chr8 (69-228)||(21666335-21666497)
chr8 (14-236)||(32400327-32400555)
chr8 (69-236)||(4807661-4807834)
chr8 (176-236)||(21929974-21930035)
chr8 (250-307)||(36249551-36249608)
chr8 (176-306)||(3380199-3380331)
chr8 (248-312)||(10007806-10007870)
chr8 (249-297)||(19499432-19499480)
chr8 (253-308)||(3819487-3819541)
chr8 (116-214)||(41385601-41385700)
chr8 (69-130)||(21929908-21929972)
chr8 (251-309)||(34602011-34602069)
chr8 (250-303)||(11282011-11282064)
chr8 (133-182)||(17857061-17857110)
chr8 (167-220)||(39910233-39910286)
chr8 (250-306)||(8802400-8802456)
chr8 (250-306)||(21929847-21929903)
chr8 (252-308)||(38974793-38974849)
chr8 (252-308)||(39005891-39005947)
chr8 (251-298)||(27453134-27453181)
chr8 (248-303)||(29968380-29968434)
chr8 (253-304)||(30927676-30927727)
chr8 (251-306)||(42982703-42982758)
chr8 (249-287)||(2373286-2373324)
chr8 (8-58)||(5192528-5192578)
chr8 (248-306)||(12351921-12351979)
chr8 (248-306)||(12353403-12353460)
chr8 (249-283)||(16233714-16233748)
chr8 (256-306)||(30335639-30335689)
chr8 (252-306)||(32968456-32968510)
chr8 (252-306)||(38980091-38980145)
chr8 (252-306)||(39011188-39011242)
chr8 (248-309)||(10006341-10006402)
chr8 (249-298)||(14170430-14170479)
chr8 (69-172)||(23565225-23565332)
chr8 (249-298)||(29435088-29435137)
chr8 (250-306)||(4518869-4518925)
chr8 (250-306)||(7117361-7117417)
chr8 (250-306)||(11283254-11283310)
chr8 (250-306)||(11456638-11456694)
chr8 (250-286)||(18881524-18881560)
chr8 (252-308)||(32973983-32974039)
chr8 (250-306)||(44147218-44147274)
[»] chr6 (58 HSPs)
chr6 (63-306)||(16415387-16415634)
chr6 (69-236)||(22968217-22968387)
chr6 (69-236)||(23820006-23820176)
chr6 (69-306)||(26239957-26240200)
chr6 (67-224)||(3118764-3118924)
chr6 (39-236)||(34833996-34834200)
chr6 (43-236)||(31210865-31211063)
chr6 (136-236)||(4013798-4013899)
chr6 (69-224)||(35102552-35102710)
chr6 (69-236)||(18791428-18791600)
chr6 (69-236)||(24603432-24603604)
chr6 (69-236)||(25819756-25819927)
chr6 (69-236)||(24051079-24051251)
chr6 (34-220)||(9241742-9241931)
chr6 (69-205)||(12291478-12291618)
chr6 (69-236)||(14572239-14572410)
chr6 (69-224)||(4597466-4597624)
chr6 (116-224)||(8412843-8412951)
chr6 (63-198)||(34528258-34528397)
chr6 (77-236)||(32451797-32451961)
chr6 (77-228)||(12427312-12427468)
chr6 (69-236)||(15298556-15298727)
chr6 (82-236)||(22269479-22269636)
chr6 (116-224)||(26710418-26710526)
chr6 (39-236)||(24615723-24615924)
chr6 (77-236)||(4370969-4371127)
chr6 (63-218)||(18749151-18749309)
chr6 (166-236)||(18749289-18749361)
chr6 (176-236)||(32682449-32682510)
chr6 (124-236)||(19282331-19282444)
chr6 (174-236)||(2058991-2059055)
chr6 (156-236)||(8149061-8149140)
chr6 (250-306)||(27437828-27437884)
chr6 (254-306)||(27447962-27448014)
chr6 (249-299)||(20863734-20863784)
chr6 (195-306)||(23124879-23124990)
chr6 (249-306)||(7316338-7316395)
chr6 (253-306)||(22968404-22968457)
chr6 (253-306)||(23819936-23819989)
chr6 (267-303)||(5658759-5658795)
chr6 (250-306)||(6842328-6842384)
chr6 (249-301)||(14195805-14195857)
chr6 (250-306)||(18749097-18749153)
chr6 (257-301)||(29473082-29473126)
chr6 (254-298)||(31329846-31329890)
chr6 (259-306)||(3333581-3333628)
chr6 (116-186)||(19176499-19176570)
chr6 (78-179)||(20863798-20863903)
chr6 (253-287)||(6840211-6840245)
chr6 (248-306)||(14822360-14822418)
chr6 (109-182)||(23124824-23124898)
chr6 (136-236)||(14195631-14195732)
chr6 (250-306)||(18791605-18791662)
chr6 (250-306)||(2059068-2059124)
chr6 (250-282)||(3333071-3333103)
chr6 (250-306)||(8412758-8412814)
chr6 (258-306)||(34834180-34834228)
chr6 (250-306)||(35102491-35102547)
[»] scaffold0291 (1 HSPs)
scaffold0291 (69-306)||(9923-10164)
[»] scaffold0014 (1 HSPs)
scaffold0014 (14-293)||(112140-112427)
[»] scaffold0062 (4 HSPs)
scaffold0062 (63-234)||(49732-49908)
scaffold0062 (63-234)||(62271-62447)
scaffold0062 (250-306)||(49659-49715)
scaffold0062 (250-306)||(62198-62254)
[»] scaffold0179 (1 HSPs)
scaffold0179 (69-236)||(5711-5882)
[»] scaffold0607 (2 HSPs)
scaffold0607 (69-236)||(2110-2282)
scaffold0607 (250-306)||(2048-2104)
[»] scaffold0174 (1 HSPs)
scaffold0174 (78-236)||(29789-29950)
[»] scaffold0025 (4 HSPs)
scaffold0025 (63-236)||(19355-19531)
scaffold0025 (69-236)||(61885-62059)
scaffold0025 (250-306)||(19529-19585)
scaffold0025 (253-306)||(62069-62122)
[»] scaffold0267 (1 HSPs)
scaffold0267 (69-236)||(3629-3799)
[»] scaffold0001 (1 HSPs)
scaffold0001 (69-236)||(142008-142179)
[»] scaffold0087 (1 HSPs)
scaffold0087 (69-237)||(25025-25198)
[»] scaffold0171 (2 HSPs)
scaffold0171 (69-177)||(9163-9276)
scaffold0171 (253-293)||(9101-9141)
[»] scaffold0150 (2 HSPs)
scaffold0150 (63-224)||(5916-6080)
scaffold0150 (250-306)||(6078-6134)
[»] scaffold0406 (1 HSPs)
scaffold0406 (61-220)||(2080-2242)
[»] scaffold0024 (1 HSPs)
scaffold0024 (109-236)||(43928-44055)
[»] scaffold0419 (2 HSPs)
scaffold0419 (63-224)||(3015-3179)
scaffold0419 (250-308)||(2959-3017)
[»] scaffold0060 (1 HSPs)
scaffold0060 (69-224)||(66259-66417)
[»] scaffold1202 (1 HSPs)
scaffold1202 (132-236)||(1902-2007)
[»] scaffold1875 (2 HSPs)
scaffold1875 (69-236)||(817-989)
scaffold1875 (250-306)||(756-812)
[»] scaffold0003 (2 HSPs)
scaffold0003 (254-306)||(39344-39396)
scaffold0003 (250-306)||(49478-49534)
[»] scaffold0320 (1 HSPs)
scaffold0320 (248-306)||(19488-19546)
[»] scaffold0302 (1 HSPs)
scaffold0302 (248-306)||(17470-17528)
[»] scaffold0690 (1 HSPs)
scaffold0690 (250-286)||(4302-4338)
[»] scaffold0227 (1 HSPs)
scaffold0227 (252-308)||(166-222)
[»] scaffold0007 (2 HSPs)
scaffold0007 (69-190)||(250579-250703)
scaffold0007 (250-308)||(250516-250574)
[»] scaffold0683 (1 HSPs)
scaffold0683 (69-134)||(5182-5250)
[»] scaffold0064 (1 HSPs)
scaffold0064 (120-186)||(54492-54558)
[»] scaffold2034 (1 HSPs)
scaffold2034 (250-307)||(232-289)
[»] scaffold0586 (1 HSPs)
scaffold0586 (250-303)||(6346-6399)
[»] scaffold0005 (1 HSPs)
scaffold0005 (195-236)||(35263-35304)


Alignment Details
Target: chr5 (Bit Score: 239; Significance: 1e-132; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 373
Target Start/End: Original strand, 41663513 - 41663893
Alignment:
Q  1 caaataaa-aaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactct--atttaaaaaattacaattttggcccctttcttc 97  Q
    |||||||| |||||||||||||| ||||||| | ||||||||||||||||||| ||||| ||||   ||| ||||||||||||||||| ||| |||| ||    
T  41663513 caaataaagaaggttaaactacatttttcgacccctaaattttaaaatattgcaattttgactcctcattaaaaaaattacaattttgacccatttcgtc 41663612  T
Q  98 ccaaaattgctaagacga---cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgtta 193  Q
    ||||||||||||||| ||   ||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  41663613 ccaaaattgctaagaagatgccacgtgtcccaaaaaaggggccataatcgcaattttttgagaaaataaagagtcaaaaaatcatatttcccttatgtta 41663712  T
Q  194 tggggttaaaagagcatatttccctaaacatggggtcacttttataa-nnnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaa 292  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||||||||||||||| ||||||||    
T  41663713 tggggtcaaaagagcatatttccctaaacatggggtcacttttgtaattttttttcttagggggccaaaatcgcaactttttaaaacttaaagggtgaaa 41663812  T
Q  293 aatgcactttagccaataaagaaactttggaaggaaccaacttgtgttatacatttgtgttgcaccatttgccacaggttc 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41663813 aatgcactttagccaataaagaaactttggaaggaaccaacttgtgttatacatttgtgttgcaccatttgccacgggttc 41663893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 63 - 306
Target Start/End: Original strand, 38476524 - 38476781
Alignment:
Q  63 ctatttaa-aaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaag 158  Q
    |||||||| ||||| ||||||||||||| |||| |||||||||||||   |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  38476524 ctatttaataaaatgacaattttggcccatttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaagggtcataatcgcaactttttgagaag 38476623  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttta--------taannnnnnnc 248  Q
    |||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||         |         |    
T  38476624 ataaggggtcaaaagatcatatttcccttatgttatggggtcaaaagagcatatttccctaaatatagggggtcactttttgtctttttttttttttttc 38476723  T
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
     ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  38476724 atagggggtcaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 38476781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 23039949 - 23040181
Alignment:
Q  9 aaggttaaactacacttttcgatctctaaattttaaaatattgcgatttt--aactctatt--taaaaaattacaattttggcccctttcttcccaaaat 104  Q
    ||||||||||| |||||||||| || ||| ||||||||| || |||||||    |||||||   |||||||||||||||||| | | ||| |||||||||    
T  23039949 aaggttaaactgcacttttcgacctataagttttaaaatgttacgattttggtcctctattaaaaaaaaattacaattttgg-ctcattcgtcccaaaat 23040047  T
Q  105 tgctaagacgacacg-tgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatgg--ggtta 201  Q
    |||| ||| | |||| | ||| ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||  ||| |    
T  23040048 tgctgagaagccacgttttccaaaaaaagggtcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttaggggaggtca 23040147  T
Q  202 aaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||||||||||||||||||||| |||||||||||    
T  23040148 aaagagcatatttccctaaacat-gggtcactttt 23040181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 70 - 301
Target Start/End: Original strand, 17825559 - 17825793
Alignment:
Q  70 aaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaaga 165  Q
    ||||||||||||||||||||||||| || |||||||  |   |||||| ||||||||||||||||||| | |||||||||| ||||||| |||||||||     
T  17825559 aaaaattacaattttggcccctttcatctcaaaattttttagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgacaagataaagg 17825658  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaat 263  Q
    ||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||  || ||||| ||| | |       |  || ||||||||||    
T  17825659 gtcaaaagaacatatttctcttatgtta-ggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtcatttttttc--agagggccaaaat 17825755  T
Q  264 cgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    ||||||||||||||||||| ||| |||||| |||||||    
T  17825756 cgcaactttttaaaacttatgggatgaaaagtgcactt 17825793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 77 - 304
Target Start/End: Complemental strand, 2373380 - 2373149
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgctaagacgac---acgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaa 172  Q
    ||||||||||||||| || ||||||||||||||||| |||   ||||||||| |||||||| |||||||||||| |||||||||| |||| | |||| ||    
T  2373380 acaattttggcccctgtcgtcccaaaattgctaagaagacgccacgtgtccccaaaaaggggtcataatcgcaaatttttgagaaaataaggggtcataa 2373281  T
Q  173 gatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaact 270  Q
     ||||||||||||||||||||| |||| |||||||||||||| | |||||||  |||||||| ||| |         | || ||||| ||||||||||||    
T  2373280 tatcatatttcccttatgttat-gggtcaaaagagcatattttcttaaacatagggggtcacgtttgt-ctttttttcatatggggctaaaatcgcaact 2373183  T
Q  271 ttttaaaacttaaggggtgaaaaatgcactttag 304  Q
    ||||||||||||||||||||||| ||||||||||    
T  2373182 ttttaaaacttaaggggtgaaaagtgcactttag 2373149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 31055369 - 31055547
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||||||||||  |||    
T  31055369 ctattaaaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaattttttgtaaag 31055468  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  31055469 ataaggggtcaaaaaa-catatttcccttatgttaaggggtcaaaagagcatatttccctaaacatagggggtcactttt 31055547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 18695252 - 18695075
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| || ||||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  |||    
T  18695252 ctattaaaaaaatggcaattttggcccctttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaag 18695153  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  18695152 ataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 18695075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 25556945 - 25557108
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||||||| |||||||||||||   |||||| ||||||||||||||||||| | ||||| |||| ||||||  ||||||| | |||||||     
T  25556945 caattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaaa 25557044  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    | |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  25557045 a-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25557108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 16901058 - 16901229
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||| |||| |||||||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  16901058 aaaaaatggcaattttggcccatttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 16901157  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  16901158 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 16901229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 40428700 - 40428857
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| ||||||||||||||||||| |||||||||||||||||||  ||||||| |    
T  40428700 aaaaaatggcaattttggcccccttcgtcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaattttttgtaaagataagg 40428799  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca 223  Q
     ||||||| | |||||||||||||||||| | ||| |||||| ||||||||||||||||    
T  40428800 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagaacatatttccctaaaca 40428857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 245837 - 245666
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  245837 aaaaaatggcaattttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 245738  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  245737 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 245666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 77 - 238
Target Start/End: Complemental strand, 34125295 - 34125128
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaa 172  Q
    |||||||||||||| ||| |||||||||| || |||   || ||||||| |||||| | ||||||||||||||| |||||||||||||||   ||||||     
T  34125295 acaattttggcccccttcatcccaaaattactgagaatacgccacgtgttccaaaacatgggtcataatcgcaactttttgagaagataagaggtcaaat 34125196  T
Q  173 gatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcacttttat 238  Q
    |||||||||| |||||||||| ||| | |||||||||||||||||||||||||  |||||||||||||    
T  34125195 gatcatattttccttatgttaggggatcaaaagagcatatttccctaaacatgaagggtcacttttat 34125128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 228
Target Start/End: Original strand, 37961309 - 37961472
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||||||||| |||| ||||||| ||||||||||||| ||| |||||   |||||||  ||||||| | ||||| |||| ||||||||||| ||| |    
T  37961309 aaaaaattacaatcttggtccctttcatcccaaaattgctgagaagacaccacgtgtcccttaaaaggggccataattgcaactttttgagaagttaagg 37961408  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
     ||||||||||||| |||||||||||||| | ||| |||||||| |||||||||||||||||||    
T  37961409 ggtcaaaagatcatttttcccttatgttaggcggtcaaaagagcgtatttccctaaacatgggg 37961472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 26639098 - 26639270
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| ||||||||||| |   |||||| ||||||||||||||||| || |||||| |||| ||||||  ||||||| |    
T  26639098 aaaaaatggcaattttggcccccttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaagataagg 26639197  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 236  Q
     |||||||   |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  26639198 ggtcaaaacg-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcactttt 26639270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 16307531 - 16307710
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||  |||||||||   |||||| ||| ||||| ||||||||| ||||||| |||| ||||||  |||    
T  16307531 ctattaaaaaaatggcaattttggcccctttcatcttaaaattgctgagaagacgccacatgtccaaaaaaaggggtcataattgcaactttttgtaaag 16307630  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggtt-aaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| ||||||||| | ||||||| |||||||||| |||| | ||||||||||||||||||||||||  ||||||||||||    
T  16307631 ataaggagtcaaaaaa-catattttccttatgttaggggggtcaaaagagcatatttccctaaacatagggggtcactttt 16307710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 224
Target Start/End: Complemental strand, 36641376 - 36641228
Alignment:
Q  79 aattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    |||||||||||||||| ||  |||||||||   |||||| || |||||||||||||||| |||||||||||| |||||   ||||||| | ||||||| |    
T  36641376 aattttggcccctttcatcaaaaaattgctgagaagacgccatgtgtcccaaaaaagggatcataatcgcaactttttataaagataacgggtcaaaa-a 36641278  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  36641277 gcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 36641228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 38408877 - 38408700
Alignment:
Q  63 ctatttaaaaaatta-caattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaa 157  Q
    ||||| ||||||||| |||||||||||| |||| ||||||||||||| ||| ||   ||||||||||| |||| |||||||||| |||| ||||||  ||    
T  38408877 ctattaaaaaaattagcaattttggccc-tttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatagcaactttttgtaaa 38408779  T
Q  158 gataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||| ||||||||  ||||||||||||    
T  38408778 gataaggggtcaaaaaa-catatttcccttatgtta-gtggtcaaaagagcatatttctctaaacatagggggtcactttt 38408700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 126 - 306
Target Start/End: Complemental strand, 20654002 - 20653820
Alignment:
Q  126 aaaaaagggtcataatcgcaattttttgagaagataaagag-tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    ||||||||| | || |||||| ||||||||||||||| ||| | ||||| ||||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  20654002 aaaaaagggccctattcgcaactttttgagaagataa-gagataaaaagttcatatttcacttatgtta-ggggtcaaaagagcatatttccctaaacat 20653905  T
Q  225 g--gggtcacttttat-aannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |   |||||||||| | |        | || |||| ||||||||||||||||||||||||||| | |||||| ||||||||||||    
T  20653904 gaaaggtcacttttgtcattttttttcataaggggtcaaaatcgcaactttttaaaacttaagagatgaaaagtgcactttagcc 20653820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 166 - 306
Target Start/End: Original strand, 23040200 - 23040340
Alignment:
Q  166 gtcaaaagatcatatttcccttatgttatggggtt-aaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatc 264  Q
    |||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||| |           || |||| |||||||    
T  23040200 gtcaaaaggtcatatttcccttatgttaggggggtcaaaagagcatatttccctaaatatggggtcacttttgtctttttttttata-ggggtcaaaatc 23040298  T
Q  265 gcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||||| |||||| || |||||||||    
T  23040299 gcaactttttaaaacttaagggatgaaaagtgtactttagcc 23040340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 110 - 308
Target Start/End: Original strand, 35302019 - 35302219
Alignment:
Q  110 agacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaa-gatcatatttcccttatgttatggggttaaaagag 207  Q
    ||||| ||||||||||| || |||| | |||||||||  ||||| ||||||||| | ||||||| |||||||||| | |||||||| ||||| |||||||    
T  35302019 agacgccacgtgtcccagaacaggggccataatcgcagcttttttagaagataagg-gtcaaaaagatcatatttacattatgttagggggtcaaaagag 35302117  T
Q  208 catatttccctaaacat-ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| || ||||||||||||   |         ||| ||| |||||||||||| |||| |||||||||||| |||||||||| |||||||    
T  35302118 catatttccctaaatatgggggtcacttttgccatttttataatagagggtcaaaatcgcaacattttgaaacttaaggggagaaaaatgcagtttagcc 35302217  T
Q  307 aa 308  Q
    ||    
T  35302218 aa 35302219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 7187388 - 7187262
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagc 208  Q
    |||||| ||| ||||||||||||||||||||||||||| ||||||  || ||||   |||| || | ||||||||||||||||||  |||| ||||||      
T  7187388 aagacgccacatgtcccaaaaaagggtcataatcgcaactttttgtaaaaataattggtcataaaa-catatttcccttatgttagagggtcaaaagaat 7187290  T
Q  209 atatttccctaaacatggggtcactttt 236  Q
    ||||||||||||||||||||||| ||||    
T  7187289 atatttccctaaacatggggtcaatttt 7187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 64 - 224
Target Start/End: Complemental strand, 10379529 - 10379367
Alignment:
Q  64 tatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaaga 159  Q
    |||| |||||||  ||||||||| ||||||| |||||||||| || ||| ||   ||| |||| || ||||||| |||||||||||| ||||||  ||||    
T  10379529 tattaaaaaaatagcaattttggtccctttcatcccaaaatttctcagaagatgccacttgtctcagaaaaggggtcataatcgcaactttttgtaaaga 10379430  T
Q  160 taaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    ||| | ||||||| | |||||||||||||||||| ||||| |||||||||||||| |||||||||    
T  10379429 taaggggtcaaaaaa-catatttcccttatgtta-ggggtcaaaagagcatattttcctaaacat 10379367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 23765496 - 23765624
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagc 208  Q
    |||||| ||||||||| |||||||   ||||||||||| ||||||  ||||||||   |||||| | |||||||||||||||||| | ||| ||||||||    
T  23765496 aagacgccacgtgtccaaaaaaagac-cataatcgcaactttttgtaaagataaatgatcaaaa-agcatatttcccttatgttaggaggtcaaaagagc 23765593  T
Q  209 atatttccctaaacat-ggggtcacttttat 238  Q
    |||||||||||||||| ||||||||||||||    
T  23765594 atatttccctaaacataggggtcacttttat 23765624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 23815344 - 23815472
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagc 208  Q
    |||||| ||||||||| |||||||   ||||||||||| ||||||  ||||||||   |||||| | |||||||||||||||||| | ||| ||||||||    
T  23815344 aagacgccacgtgtccaaaaaaagac-cataatcgcaactttttgtaaagataaatgatcaaaa-agcatatttcccttatgttaggaggtcaaaagagc 23815441  T
Q  209 atatttccctaaacat-ggggtcacttttat 238  Q
    |||||||||||||||| ||||||||||||||    
T  23815442 atatttccctaaacataggggtcacttttat 23815472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 224
Target Start/End: Original strand, 10293191 - 10293306
Alignment:
Q  109 aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| ||| ||||  ||||||| |||||||||||||| ||||||  ||||||| ||||||||| | |||||||||||||||||| | ||| |||||||    
T  10293191 aagacgccacatgtcttaaaaaagaggtcataatcgcaactttttggaaagataaggagtcaaaaaa-catatttcccttatgttaggaggtcaaaagag 10293289  T
Q  208 catatttccctaaacat 224  Q
    |||||||||| ||||||    
T  10293290 catatttcccaaaacat 10293306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 31576607 - 31576663
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31576607 tagggggacaaaatcgcaactttttaaaacttaaggggtgaaaagtgcactttagcc 31576663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 19169586 - 19169428
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||  ||| |||||||||   |||||| ||||||| | |||||| ||| |||||| |||| ||||||  ||||||| |    
T  19169586 aaaaaatggcaattttggcccccttgatcctaaaattgctgagaagacgccacgtgttcaaaaaaatgggccataattgcaactttttgtaaagataagg 19169487  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||| |||||||||| |||||||||    
T  19169486 ggtcaaaa-agcatatttcccttatgttaagaggtcaaatgagcatattttcctaaacat 19169428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 8645932 - 8645882
Alignment:
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8645932 atcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 8645882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 227
Target Start/End: Original strand, 17704704 - 17704808
Alignment:
Q  122 tcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 220  Q
    ||||||||||||| | |||||  ||| ||||||  ||||||||| |||||||  | ||||||||||||||||||||| | |||||||||||||| |||||    
T  17704704 tcccaaaaaaggggccataatttcaactttttgtaaagataaagggtcaaaaagt-atatttcccttatgttatggg-tcaaaagagcatattttcctaa 17704801  T
Q  221 acatggg 227  Q
    |||||||    
T  17704802 acatggg 17704808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 462966 - 462850
Alignment:
Q  109 aagacgacacgtgtcccaaaaa-agggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| ||||||||  ||||| | |||||||||||||| ||||||  ||||||| | ||||||||| |||||||| ||||| ||||  ||| ||||  |    
T  462966 aagacgccacgtgtctaaaaaagaaggtcataatcgcaactttttgtaaagataaggggtcaaaagaacatatttctcttatattat-aggtcaaaaagg 462868  T
Q  208 catatttccctaaacatg 225  Q
    ||||||||||||||||||    
T  462867 catatttccctaaacatg 462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 308
Target Start/End: Original strand, 22940665 - 22940725
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||||    
T  22940665 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaa 22940725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 7835891 - 7835795
Alignment:
Q  126 aaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    ||||||||| ||||||| ||  | ||||  ||||||| | ||||||| | ||||||| |||||||||||||| | ||||||||||||||||||||||||    
T  7835891 aaaaaagggccataatcccacctctttgtaaagataaggggtcaaaaaa-catattttccttatgttatggg-tcaaaagagcatatttccctaaacat 7835795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 15885178 - 15885132
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 304  Q
    ||||||||||||||||| |||||||||||||||||| |||| |||||    
T  15885178 caaaatcgcaactttttgaaacttaaggggtgaaaagtgcaatttag 15885132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 38834135 - 38834085
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||||||||||||||||| ||||||||  |||||||||||||| ||||    
T  38834135 caaaatcgcaactttttaaaagttaaggggaaaaaaatgcactttaaccaa 38834085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 2373393 - 2373449
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||| |||||||||||||||||||| ||||||| ||| |||||| |||| |||||||    
T  2373393 taggaggccaaaatcgcaactttttgaaacttaggggttgaaaagtgcagtttagcc 2373449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 8646002 - 8646050
Alignment:
Q  255 ggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    ||||||||||||||| ||||||||| ||||||| ||||| |||||||||    
T  8646002 ggccaaaatcgcaacattttaaaacataaggggcgaaaagtgcacttta 8646050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 10452756 - 10452709
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||| ||||    
T  10452756 agggggccaaaatcgtaacttttcaaaacataaggggtgaaaagtgca 10452709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 10453121 - 10453168
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    ||||||||||||||| ||||||||||||| ||| || |||||||||||    
T  10453121 agggggccaaaatcgtaactttttaaaacataaaggatgaaaaatgca 10453168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 4800981 - 4800935
Alignment:
Q  259 aaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagc 305  Q
    ||||||||||| |||||||||||| |||| |||||||||| ||||||    
T  4800981 aaaatcgcaacattttaaaacttagggggcgaaaaatgcagtttagc 4800935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 16650898 - 16650956
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||| |||||| |||| ||||||||| |||||||  ||||| ||||||||||||    
T  16650898 cttagggggtcaaaattgcaagtttttaaaagttaagggtggaaaagtgcactttagcc 16650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 18486945 - 18487003
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||| ||||| ||| |||||||| | ||| ||||||||||||    
T  18486945 cttagggggccaaaattgcaagtttttgaaagttaagggggggaaagtgcactttagcc 18487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 25523127 - 25523069
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||| ||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  25523127 cttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 25523069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 33160329 - 33160387
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||| ||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  33160329 cttagggggctaaaattgcaagtttttgaaaattaaggggggaaaagtgcactttagcc 33160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 40255716 - 40255773
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| |||||| |||| ||||||||| ||||| || ||||| ||||||||||||    
T  40255716 ttagggggtcaaaattgcaagtttttaaaaattaagaggggaaaagtgcactttagcc 40255773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 42195188 - 42195137
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||| |||||||||    
T  42195188 tagggggccaaaatcgcaacttttt-aaagttaagggg-gaaaagtgcacttta 42195137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 224
Target Start/End: Original strand, 15885335 - 15885383
Alignment:
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    |||||||||||||||||| | ||| ||||||| |||||||| |||||||    
T  15885335 catatttcccttatgttaagaggtcaaaagagaatatttccataaacat 15885383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 18695250 - 18695306
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||  |||| |||| || |||| ||||| ||||||||||||    
T  18695250 tagggggccaaaatcgcaatattttgaaacatagggggcgaaaagtgcactttagcc 18695306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 18739909 - 18739837
Alignment:
Q  116 cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaa-gataaagagtcaaaagatcatatttccct 186  Q
    ||||||||||||||||||| ||| ||||| || ||||||| || ||||||| | ||||||| |||||||||||    
T  18739909 cacgtgtcccaaaaaaggggtcaaaatcgtaactttttgataaagataaagggccaaaagagcatatttccct 18739837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 24025077 - 24025021
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||  |||| ||||||| |||| ||| | ||||||||||||    
T  24025077 tagggggccaaaatcgcaatattttgaaacttagggggcgaatagtgcactttagcc 24025021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 312
Target Start/End: Original strand, 3403051 - 3403360
Alignment:
Q  10 aggttaaactacacttttcgatctc-taaattttaaaatattgcgattttaactctat-ttaaaaaattacaattttggcccctttcttcccaaaattgc 107  Q
    |||||||||| |||||||||| | | | | ||||||||| |||||||||| || |  | |||||||||||||||||||||||||||| |||||||||| |    
T  3403051 aggttaaactgcacttttcgaccccctgagttttaaaatgttgcgattttgaccccctattaaaaaattacaattttggcccctttcgtcccaaaattcc 3403150  T
Q  108 taag---acgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaa 203  Q
    | ||   ||| ||| ||||||||||||| |||||||||||||| |||||||||| |||| |  ||||||||||||||||||||||||||| ||||| |||    
T  3403151 tgaggagacgccacatgtcccaaaaaagtggtcataatcgcaagtttttgagaacataagggatcaaaagatcatatttcccttatgttagggggtcaaa 3403250  T
Q  204 agagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    ||||||||||| |||| ||||  |||||||||||| | |         ||||||| |||||||||||| |||||||||||||| |||||||| ||| |||    
T  3403251 agagcatattttcctatacatgaggggtcacttttgtcattttttttatagggggtcaaaatcgcaac-ttttaaaacttaagaggtgaaaattgccctt 3403349  T
Q  302 tagccaataaa 312  Q
    |||||||||||    
T  3403350 tagccaataaa 3403360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 39182242 - 39182008
Alignment:
Q  6 aaaaaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaa 103  Q
    ||||||| |||||| |||||||||  | |||| ||| ||||| |||| ||||| || |  |||| ||||||| |||||||||||||||||  ||||||||    
T  39182242 aaaaaggctaaactgcacttttcgccccctaagtttaaaaatgttgcaattttgaccccctattaaaaaaatgacaattttggccccttttgtcccaaaa 39182143  T
Q  104 ttgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggt 199  Q
    |||||   || ||  |||||||||||||| || || ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||  |||    
T  39182142 ttgctgagaaaacaccacgtgtcccaaaacagaggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttat--ggt 39182045  T
Q  200 taaaagagcatatttccctaaacatggggtcactttt 236  Q
     ||||||||||||||||||||||||||||||| ||||    
T  39182044 caaaagagcatatttccctaaacatggggtcattttt 39182008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 33237437 - 33237645
Alignment:
Q  32 ctctaaattttaaaatattgcgattttaa-ctctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaa 127  Q
    |||||||||||||||| ||||||||||   ||||||| |||||||| |||||||||||| |||| |||||||||||||   |||||| ||||||||||||    
T  33237437 ctctaaattttaaaatgttgcgattttggtctctattaaaaaaattgcaattttggccc-tttcatcccaaaattgctgagaagacgccacgtgtcccaa 33237535  T
Q  128 aaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg 226  Q
    || || |||||||||| ||| ||||| ||||| ||| | ||||||| |||||||| ||||||| ||| ||||| ||||||||||||| ||||||||||||    
T  33237536 aacagtggtcataatcacaacttttttagaaggtaaggggtcaaaatatcatattacccttattttagggggtgaaaagagcatattgccctaaacatgg 33237635  T
Q  227 ggtcactttt 236  Q
    ||| ||||||    
T  33237636 ggtgactttt 33237645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 25002952 - 25002780
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataa 162  Q
    ||||||||| |||||||||||||||||  ||||||| ||||||||| ||| |   ||||||||||| | ||||||||||||||| ||| |||||||||||    
T  25002952 ttaaaaaatgacaattttggccccttttatcccaaagttgctaagaggacgccatgtgtcccaaaacacgggtcataatcgcaaatttatgagaagataa 25002853  T
Q  163 agagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     | ||||||||||||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||| ||||    
T  25002852 ggggtcaaaagatcatatttcctttatgtta-ggggtcaaaagagcatgtttccctaaacatggggtcattttt 25002780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 9822159 - 9822294
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaa 163  Q
    |||||||||||||||||| ||||||||| |||||||||||||   |||||| || |||||||||||| ||||||||||||||| |||||||||||||||     
T  9822159 ttaaaaaattacaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaaaggggtcataatcgcaactttttgagaagataag 9822258  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggt 199  Q
    | ||||||||||| |||||||||||||||| |||||    
T  9822259 gggtcaaaagatcgtatttcccttatgttagggggt 9822294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 199
Target Start/End: Original strand, 10724084 - 10724219
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaa 163  Q
    |||||||||||||||||| ||||||||| |||||||||||||   |||||| || |||||||||||| ||||||||||||||| |||||||||||||||     
T  10724084 ttaaaaaattacaattttagcccctttcgtcccaaaattgctgagaagacgccatgtgtcccaaaaaggggtcataatcgcaactttttgagaagataag 10724183  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggt 199  Q
    | ||||||||||| |||||||||||||||| |||||    
T  10724184 gggtcaaaagatcgtatttcccttatgttagggggt 10724219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 236
Target Start/End: Complemental strand, 19493629 - 19493392
Alignment:
Q  2 aaataaaaaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactctat-ttaaaaaattacaattttggcccctttcttccca 100  Q
    ||||||| |||||||||| || ||||||  || ||| ||||||||| |||||||||| || |  | |||||||||  ||||||||||||||||| |||||    
T  19493629 aaataaataggttaaactgcatttttcgccctttaagttttaaaatgttgcgattttgaccccctattaaaaaatagcaattttggcccctttcatccca 19493530  T
Q  101 aaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatgg 196  Q
    |||| |||   |||||| ||||||||| |||| |||| | |||||| || ||||| |||||||||||| ||||||| ||||||||| ||||||||| |||    
T  19493529 aaatggctgagaagacgccacgtgtcctaaaacaggggccataatcacacttttt-gagaagataaagggtcaaaaaatcatattttccttatgtt-tgg 19493432  T
Q  197 ggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||| |||| ||||||||||| |||||||||||||||||||    
T  19493431 ggtcaaaatagcatatttccataaacatggggtcactttt 19493392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 126 - 306
Target Start/End: Complemental strand, 5111621 - 5111442
Alignment:
Q  126 aaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg 225  Q
    ||||| ||| ||||||||||| ||||||||||||||| | ||||||| |||||||||||||||||||| ||||| |||||| ||||||| ||||||||||    
T  5111621 aaaaaggggccataatcgcaactttttgagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaagaacatattttcctaaacatg 5111523  T
Q  226 gggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||         |  ||| |||||||||| ||| ||||| |||||||||||||||||| ||||||||||||    
T  5111522 gggtcacttttatcctttttttcacaggaggccaaaatcacaagtttttgaaacttaaggggtgaaaagtgcactttagcc 5111442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 4571478 - 4571575
Alignment:
Q  139 aatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  4571478 aatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttatggggtaaaaagagcatatttccctaaacattgggtcactttt 4571575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 41452310 - 41452482
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||| ||||||||||||||||| ||| |||||||||   |||||||||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  41452310 aaaaaattgcaattttggcccctttcatccaaaaattgctgagaagacgacacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 41452409  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| | ||||| ||||||||||||||||  ||||||||||||    
T  41452410 ggtcaaaa-agcatatttcccttatgttaggaggtcagaagagtatatttccctaaacataaggggtcactttt 41452482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 69 - 218
Target Start/End: Complemental strand, 15681873 - 15681720
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||||||||||||||||||||| ||||||||||  |   |||||| ||||||||||||||||| || ||||||||||| ||||||| ||||||| |    
T  15681873 aaaaaattacaattttggcccctttcgtcccaaaatttatgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgacaagataagg 15681774  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccct 218  Q
     |||||||||||||| ||||||||||||| ||||| |||||| |||| ||||||    
T  15681773 ggtcaaaagatcatagttcccttatgttagggggtcaaaagatcatagttccct 15681720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 39 - 233
Target Start/End: Complemental strand, 24464851 - 24464651
Alignment:
Q  39 ttttaaaatattgcgattttaactct--atttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaa-aag 132  Q
    ||||||||| ||  |||||| |||||  ||| ||||||| ||||||||| |||| ||| | | |||||||||   |||||| ||| |||| ||||| ||     
T  24464851 ttttaaaatgttctgattttgactctcaattaaaaaaatgacaattttgtcccccttcattctaaaattgctgagaagacgccacatgtcacaaaacaat 24464752  T
Q  133 ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcac 232  Q
    |  |||||||||||  |||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  24464751 gaccataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatggggtcac 24464652  T
Q  233 t 233  Q
    |    
T  24464651 t 24464651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 21224407 - 21224585
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||| |||||||||   |||||| |||||||| ||||||| ||| ||||||||||| ||||||  |||    
T  21224407 ctattaaaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtctcaaaaaaagggccataatcgcaactttttgtaaag 21224506  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  21224507 ataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 21224585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 27869250 - 27869428
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| ||||||| |||||||||||| | ||| |||||||||||||   |||||| || |||||||||||||||| | |||||||||| ||||||  |||    
T  27869250 ctattaaaaaaatgacaattttggcctccttcatcccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaag 27869349  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  27869350 ataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 27869428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 36746564 - 36746722
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||||||| ||||||||||| |   |||||| ||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  36746564 aaaaaatgacaattttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 36746663  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     || |||||  |||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  36746664 ggttaaaagg-catatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 36746722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 48176024 - 48176181
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtccca-aaaaagggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| |||||||||||||   |||| | ||||||||||| |||| ||||||||||||||| ||||||  ||||||| |    
T  48176024 aaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagg 48176123  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  48176124 ggtcaaaa-aacatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 48176181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 20636861 - 20636690
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||| | ||||||||||||| |||   || ||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  20636861 aaaaaatggcaattttggcccctt-catcccaaaattgctgagaaaacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 20636763  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  20636762 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 20636690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 70 - 236
Target Start/End: Complemental strand, 26385503 - 26385332
Alignment:
Q  70 aaaaattacaattttggcccctttcttcccaaaattgctaa---gacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||| |||||||||||||||||  ||| |||||||||||   |||| ||| |||||||||| | ||| ||||||||||| |||||||||||||||       
T  26385503 aaaaatgacaattttggccccttttgtcctaaaattgctaataagacgccacatgtcccaaaacatgggccataatcgcaactttttgagaagataagag 26385404  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcactttt 236  Q
    ||||||| |||||||||| ||||||||| ||||| |||| ||||||||||||||||||||  |||||||||||    
T  26385403 gtcaaaatatcatatttctcttatgtta-ggggtcaaaatagcatatttccctaaacatgatgggtcactttt 26385332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 61 - 194
Target Start/End: Complemental strand, 42303398 - 42303261
Alignment:
Q  61 ctctatttaaaaaatt-acaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaagggtcataatcgcaattttttgaga 156  Q
    |||||||||||||| | |||||||||||||||||  || |||||||||| ||| |||||   |||||||||||| ||||||| ||||||| |||||||||    
T  42303398 ctctatttaaaaaaatgacaattttggccccttttgtctcaaaattgctgagaagacaccacgtgtcccaaaaaggggtcatgatcgcaagtttttgaga 42303299  T
Q  157 agataaagagtcaaaagatcatatttcccttatgttat 194  Q
    |||||| | |||||||||||||||||||||||| ||||    
T  42303298 agataaggggtcaaaagatcatatttcccttatattat 42303261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 26126445 - 26126336
Alignment:
Q  118 cgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttcc 216  Q
    |||||||||||| |||| | |||||||||| ||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||| |||||||||||    
T  26126445 cgtgtcccaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaaaagcatatttcc 26126347  T
Q  217 ctaaacatggg 227  Q
    |||||||||||    
T  26126346 ctaaacatggg 26126336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 31494153 - 31493982
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||| ||||||||||| | |||||||||| ||||||  ||||||| |    
T  31494153 aaaaaatggcaattttggcccctttcatcctaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataagg 31494054  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | ||||||| ||||||||||  |||| |||||||||||||||||||||||| ||||||||||||    
T  31494053 ggtcaaaa-agcatattttccttatgttagagggtcaaaagagcatatttccctaaacataggggtcactttt 31493982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 35337577 - 35337755
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||  ||||||  |   |||||| ||||||||||||||||||| |||||||||||| ||||||  |||    
T  35337577 ctattaaaaaaatagcaattttggcccctttcatcaaaaaattattgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaag 35337676  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  35337677 ataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 35337755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 315
Target Start/End: Complemental strand, 42271575 - 42271324
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||| ||| ||| |||||||||   |||||| ||||||| |||||||| ||| ||||||||||| ||||||  || |||| |    
T  42271575 aaaaaatgacaattttggcccccttcatccgaaaattgctgagaagacgccacgtgttccaaaaaaagggccataatcgcaactttttgtaaacataagg 42271476  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaa 262  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||   |         |||| ||||||||    
T  42271475 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcacttttgccatttttttaataggaggccaaaa 42271377  T
Q  263 tcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaa 315  Q
    ||||||| |||| |||||||  ||| |||||||| | ||||||||| ||||||    
T  42271376 tcgcaacattttgaaacttagagggcgaaaaatgaaatttagccaaaaaagaa 42271324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 235
Target Start/End: Complemental strand, 43251509 - 43251338
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacgac----acgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaa 163  Q
    |||||||||||||||||||  ||||| ||| |||| || | ||| |||    |||||||| |||||| ||||| |||||| || ||||||||||||||||    
T  43251509 aaaaaattacaattttggcttctttcatcctaaaaatgttgagaagacgcccacgtgtccaaaaaaaagggtcttaatcgtaactttttgagaagataaa 43251410  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttt 235  Q
    ||||||||||||||||||||||||||||||  |||| ||||||| | |||| |||||||||| | |||||||    
T  43251409 gagtcaaaagatcatatttcccttatgttagagggtcaaaagagtacattttcctaaacatgagatcacttt 43251338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 4193783 - 4193637
Alignment:
Q  79 aattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    |||||||||||||||| | |||||||||||   |||||| |||||||| |||||||||| | ||||| |||| ||||||| ||||||| | |||||||||    
T  4193783 aattttggcccctttccttccaaaattgctgaaaagacgtcacgtgtctcaaaaaaggggccataattgcaactttttgaaaagataaggggtcaaaaga 4193684  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaac 222  Q
    ||||||||| |||||||||  |||| ||||||||||||||||||||||    
T  4193683 tcatatttctcttatgtta-agggtcaaaagagcatatttccctaaac 4193637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 13577841 - 13578017
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| |||||||||||||   |||||| ||||||| |||||||| ||| ||||||  ||| ||||||   ||    
T  13577841 ctattaaaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataatttcaactttttgtatag 13577940  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||||| ||||||| | |||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||||||||||    
T  13577941 ataaagggtcaaaa-agcatatttcccttatgtta-ggggtcaaaagagcatatttccttaaacataggggtcactttt 13578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 2331243 - 2331084
Alignment:
Q  82 tttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatca 177  Q
    ||||||||||||| ||| |||||||||   |||||| ||| ||||||||||||  || ||||||||||| ||||||  ||||||| ||||||||| | ||    
T  2331243 tttggcccctttcatccaaaaattgctgagaagacgccacttgtcccaaaaaataggccataatcgcaactttttgtaaagataaggagtcaaaa-agca 2331145  T
Q  178 tatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  2331144 tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 2331084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 224
Target Start/End: Original strand, 10023785 - 10024003
Alignment:
Q  10 aggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgc 107  Q
    |||||||||| |||||||||  | ||| |||||||||| |||||| ||| || |  |||| |||||||  ||||||||||||||||  || |||||||||    
T  10023785 aggttaaactgcacttttcgccccctatattttaaaatgttgcgagtttgaccccctattaaaaaaatgtcaattttggccccttttgtctcaaaattgc 10023884  T
Q  108 taagacgacac---gtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaa 204  Q
    | ||| |||||   |||||||||||| ||| |||| |||||| ||||||  ||||||| | ||||||| |  |||||| |||||||| | ||||| ||||    
T  10023885 tgagaagacaccacgtgtcccaaaaaggggccatattcgcaactttttgtaaagataaggggtcaaaaaaa-atattttccttatgtaagggggtcaaaa 10023983  T
Q  205 gagcatatttccctaaacat 224  Q
    ||||||||||||||||||||    
T  10023984 gagcatatttccctaaacat 10024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 3562503 - 3562665
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||| ||| ||| ||| |||||   |||||| ||||||||| ||||||||| | |||||||||| ||||||  ||||||| | |||||||     
T  3562503 caattttggcccccttcatcctaaacttgctgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaa- 3562601  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  3562602 agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 3562665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 17306008 - 17305836
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg--tcataatcgcaattttttgagaagataaa 163  Q
    ||||||| |||||||||| ||||||| ||||||||||| |   |||||| ||| |||||||||||||||  |||||||| ||| ||||||  || ||||     
T  17306008 aaaaaatgacaattttgggccctttcatcccaaaattgatgagaagacgccacatgtcccaaaaaagggggtcataatcacaactttttgtaaaaataag 17305909  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    | ||||||| | |||||||||||||||||| | ||| |||||||||||||| ||||||||| ||||||||||||    
T  17305908 gggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacataggggtcactttt 17305836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 69 - 186
Target Start/End: Complemental strand, 5087239 - 5087118
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||||||| ||||||||||| |   |||||| |||||||||||||| |||| |||||||||||| ||||||| ||||||| |    
T  5087239 aaaaaatgacaattttggcccctttcgtcccaaaattgatgagaagacgccacgtgtcccaaaatagggatcataatcgcaactttttgaaaagataagg 5087140  T
Q  165 agtcaaaagatcatatttccct 186  Q
     ||||||| |||||||||||||    
T  5087139 ggtcaaaaaatcatatttccct 5087118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 7365468 - 7365292
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtca-taatcgcaattttttgagaagataa 162  Q
    |||||||||  |||||||||||| |||| ||||||||||||| ||| ||   |||||||||||||| || | || ||||||||| |||||||||||||||    
T  7365468 ttaaaaaatggcaattttggcccttttcgtcccaaaattgctgagaagatgtcacgtgtcccaaaacagaggcaataatcgcaactttttgagaagataa 7365369  T
Q  163 agagtcaaaagatcatatttcccttatg--ttat-ggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     ||||||||| |||||||||||||||||  |  | ||||| || ||||||||||| || |||||| |||||||||||    
T  7365368 ggagtcaaaatatcatatttcccttatgcatggtaggggtcaatagagcatatttgccaaaacattgggtcactttt 7365292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 10655572 - 10655415
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| |||| ||||||||||||||| ||||||  ||||||| |    
T  10655572 aaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaagataagg 10655473  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     || |||| |  ||||||| ||||| ||| ||| ||||||||||||||||||||||||||    
T  10655472 ggttaaaaaa--atatttctcttatattaggggattaaaagagcatatttccctaaacat 10655415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 19195268 - 19195446
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||| ||||||| |   |||||| ||| ||||||||||||||| | |||||| ||| ||||||  |||    
T  19195268 ctattaaaaaaatagcaattttggcccctttcatccaaaaattgttgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaag 19195367  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| |||||||| |||||||||||||||  ||||||||||||    
T  19195368 ataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcgtatttccctaaacatagggggtcactttt 19195446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 18754327 - 18754485
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagg-gtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||| |||||||| ||||||||||| | ||| ||   ||||||||||| |||| | |||||||||||||  |||||  ||||||| |    
T  18754327 aaaaaatagcaattttgacccctttcatcccaaaattgatcagaagataccacgtgtcccagaaaatgtgtcataatcgcaacattttgtaaagataagg 18754426  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18754427 ggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 18754485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 9157183 - 9157281
Alignment:
Q  137 ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||||||||| |||||||||||||||   |||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||  ||||||||||    
T  9157183 ataatcgcaactttttgagaagataagtggtcaaaagatcatatttcacttatgtta-ggggtcaaaagagcatattttcctaaacatttggtcactttt 9157281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 24597571 - 24597734
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||| | |||||||||||||   |||||| |||||||| |||| ||||| | |||||||||| ||||||  |||    
T  24597571 ctattaaaaaaatggcaattttggcccctt-catcccaaaattgctgagaagacgccacgtgtctcaaacaaggggccataatcgcaactttttgtaaag 24597669  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    | || | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  24597670 agaaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 24597734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 14 - 225
Target Start/End: Original strand, 44077876 - 44078091
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaact--ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaag 111  Q
    ||||||| | |||||| ||||||| ||||||||| ||||||||||  ||  ||||| |||||| |  | |||||| ||||||| ||||||||||||||||    
T  44077876 taaactatatttttcgctctctaa-ttttaaaatgttgcgatttttgcttcctattaaaaaaaattga-ttttggtccctttcgtcccaaaattgctaag 44077973  T
Q  112 acgacac---gtgtcccaaaaaagg-gtcataatcgcaa-ttttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaaga 206  Q
    | ||| |   |||||||||||| |  ||||||||||||| |||||||  ||||||| | ||||||| | |||||||| ||||||||| | ||| ||||||    
T  44077974 aagacgccatgtgtcccaaaaaggatgtcataatcgcaacttttttgtaaagataaggggtcaaaaaa-catatttctcttatgttaggaggtcaaaaga 44078072  T
Q  207 gcatatttccctaaacatg 225  Q
    |||||||||||||||||||    
T  44078073 gcatatttccctaaacatg 44078091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 19919603 - 19919834
Alignment:
Q  10 aggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgc 107  Q
    |||||||| | |||||||||  | ||| |||||||||| ||||||||||  | |  |||| |||||||  |||||||||| || ||| ||||||||||||    
T  19919603 aggttaaagtgcacttttcgccccctatattttaaaatgttgcgattttggccccttattaaaaaaatggcaattttggcacccttcatcccaaaattgc 19919702  T
Q  108 taagacgac---acgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaa 203  Q
    | |||  ||   |||||||||||||||||| | |||||| ||| ||||||  ||||||| | ||||||| | ||||||| |||||||||| | ||| |||    
T  19919703 tgagaaaacgctacgtgtcccaaaaaaggggctataatcacaactttttgtaaagataaggggtcaaaaaa-catattttccttatgttaggaggtcaaa 19919801  T
Q  204 agagcatatttccctaaacat-ggggtcactttt 236  Q
    ||||||||||| ||||||||| ||||||||||||    
T  19919802 agagcatattt-cctaaacatgggggtcactttt 19919834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 109 - 228
Target Start/End: Complemental strand, 3148123 - 3148004
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagc 208  Q
    |||||| | |||||||||||||||||  ||||| |||||||||||  ||| ||||| |||||| || ||||||||| |||| ||| ||| | ||||||||    
T  3148123 aagacgcctcgtgtcccaaaaaagggctataattgcaattttttgtaaagttaaagggtcaaaggagcatatttccattattttaggggatcaaaagagc 3148024  T
Q  209 atatttccctaaacatgggg 228  Q
    |||| |||||||||||||||    
T  3148023 atatatccctaaacatgggg 3148004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 236
Target Start/End: Complemental strand, 14624899 - 14624676
Alignment:
Q  16 aactacacttttcgatctctaaattttaaaatattgcgattttaactctatttaaaaaat-tacaattttggcccctttcttcccaaaattgctaagacg 114  Q
    |||| |||||||||  |||||| ||| ||||| ||||||||||| | ||||| ||||||  |  || |||| ||| |||  ||||||||||||| |||      
T  14624899 aactgcacttttcgtcctctaagtttcaaaattttgcgattttagccctattgaaaaaaaatgaaaatttgacccattttgtcccaaaattgctgagaac 14624800  T
Q  115 a---cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcat 210  Q
    |   ||||||||||||||||||| | ||||| |||| ||||||  ||||||||| |||||||  | ||||||||||||||||||||| | ||||||||||    
T  14624799 atgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataaagggtcaaaaagt-atatttcccttatgttatggg-tcaaaagagcat 14624702  T
Q  211 atttccctaaacatggggtcactttt 236  Q
    |||| ||||||||| |||| ||||||    
T  14624701 attttcctaaacattgggttactttt 14624676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 306
Target Start/End: Complemental strand, 15681740 - 15681595
Alignment:
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnnct---tagggggccaa 260  Q
    |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||  || ||||| ||| |         ||   |||||| ||||    
T  15681740 gtcaaaagatcatagttcccttatgttagggggtcaaaagagcatatttccctaaacatgaggtgtcacatttgtcttttttttcttcataggggaccaa 15681641  T
Q  261 aatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||||||||| ||||||||| | ||||||||||    
T  15681640 aatcgcaactttttaaaacttaatgggtgaaaagttcactttagcc 15681595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 11843239 - 11843396
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| |||||||||||||   |||||| ||||| | | |||||| ||| |||||| |||| ||||||  | ||||| |    
T  11843239 aaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtattcaaaaaaaggggccataattgcaactttttgtaaggataagg 11843338  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | ||||||| |||||||||| ||||| ||||||||||||||||||||||||    
T  11843339 ggtcaaaa-agcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacat 11843396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 80 - 224
Target Start/End: Original strand, 21225621 - 21225766
Alignment:
Q  80 attttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatc 176  Q
    ||||||| ||||||| ||| ||||||| |   |||||| ||||||| |||||||| |||||||||||||| ||||||  ||||  | | ||||||  | |    
T  21225621 attttggtccctttcgtcctaaaattgttgagaagacgtcacgtgttccaaaaaatggtcataatcgcaactttttgtaaagacgaggggtcaaat-agc 21225719  T
Q  177 atatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  21225720 atatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 21225766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 20638663 - 20638562
Alignment:
Q  136 cataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcact 233  Q
    ||||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  |||||||||    
T  20638663 cataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcact 20638565  T
Q  234 ttt 236  Q
    |||    
T  20638564 ttt 20638562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 212
Target Start/End: Original strand, 39440248 - 39440328
Alignment:
Q  132 gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatat 212  Q
    ||||||||||||||| ||||||| ||||||| |  ||||||||||||||||||||||||||| | ||| |||||| |||||    
T  39440248 gggtcataatcgcaactttttgaaaagataagggatcaaaagatcatatttcccttatgttaggaggtcaaaagatcatat 39440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 186
Target Start/End: Complemental strand, 6650745 - 6650632
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaa 172  Q
    |||||||| ||||||||| ||||||||||| |   |||||| ||| |||| ||||| |||| | |||||||||| ||||||||||||||| | |||||||    
T  6650745 acaattttagcccctttcgtcccaaaattgatgagaagacgccacatgtctcaaaacaggggccataatcgcaactttttgagaagataaggggtcaaaa 6650646  T
Q  173 gatcatatttccct 186  Q
    || |||||||||||    
T  6650645 gagcatatttccct 6650632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 23439787 - 23439674
Alignment:
Q  116 cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    |||||||||||||| |||| |||||||||||| ||||| | ||||||| |  |||||||| ||||||||||||| ||||  | || |||| | |||||||    
T  23439787 cacgtgtcccaaaacaggggtcataatcgcaacttttttaaaagataagggatcaaaagagcatatttcccttaagttagagagtcaaaatatcatattt 23439688  T
Q  215 ccctaaacatgggg 228  Q
    || |||||||||||    
T  23439687 ccttaaacatgggg 23439674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 23461132 - 23461245
Alignment:
Q  116 cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    |||||||||||||| |||| |||||||||||| ||||||| | |||||||  ||||||||  ||||||| |||| ||||  |||| |||| | |||||||    
T  23461132 cacgtgtcccaaaacaggggtcataatcgcaactttttgaaatgataaaggatcaaaagagaatatttctcttaagttagagggtcaaaataacatattt 23461231  T
Q  215 ccctaaacatgggg 228  Q
    || |||||||||||    
T  23461232 ccttaaacatgggg 23461245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 80 - 217
Target Start/End: Original strand, 24448114 - 24448256
Alignment:
Q  80 attttggcccctttcttcccaaaattgct---aagacgacacgtgtccc--aaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    ||||||| ||||||| | |||||||||||   |||||| | ||||||||  ||||| ||| ||||||| || |||||||  ||||||| | |||| || |    
T  24448114 attttggtccctttcgttccaaaattgctgagaagacgtcgcgtgtcccttaaaaaggggccataatcacatttttttgtaaagataaggggtcataaaa 24448213  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccc 217  Q
     |||||||||||||||||| ||||| |||| ||||||||||||    
T  24448214 acatatttcccttatgttagggggtcaaaaaagcatatttccc 24448256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 9822314 - 9822370
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  9822314 tagggtgctaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 9822370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 10724239 - 10724295
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||| || |||||| |||||||||||||||||||||||||||| ||||||||||||    
T  10724239 tagggtgctaaaatcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 10724295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 47113373 - 47113425
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    |||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  47113373 ttagggggccaaaatcgcaactttttaaaagttaaggggtcacaaatgcactt 47113425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 6798083 - 6798134
Alignment:
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg 225  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  6798083 atcatatttcccttatgttagagggtcaaaagagcatatttccctaaacatg 6798134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 226
Target Start/End: Original strand, 15093813 - 15093970
Alignment:
Q  70 aaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaaga 165  Q
    |||||| |||||||||| ||||||| | |||||||||||   |||||| |||||| | ||||| | || | |||||||||| |||||||  | |||  ||    
T  15093813 aaaaatgacaattttggtccctttcgttccaaaattgctgagaagacgtcacgtgcctcaaaacatgggctataatcgcaactttttga--atatag-ga 15093909  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg 226  Q
      ||||||||  |||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  15093910 cgcaaaagattttatttcccttttgttagggggttaaaagagcttatttccctaaacatgg 15093970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 67 - 182
Target Start/End: Complemental strand, 5348273 - 5348153
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagg-gtcataatcgcaa-ttttttgagaagata 161  Q
    ||||||||| ||||||||| || ||||| |||||||||||||   |||||| ||| | |||||||| ||| | ||||||||||| |||||| ||||||||    
T  5348273 ttaaaaaatgacaattttgacctctttcgtcccaaaattgctgagaagacgtcacatatcccaaaacaggagccataatcgcaactttttttagaagata 5348174  T
Q  162 aagagtcaaaagatcatattt 182  Q
    | | ||||||||| |||||||    
T  5348173 aggggtcaaaagagcatattt 5348153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 6798014 - 6798095
Alignment:
Q  136 cataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccct 218  Q
    ||||||||||| ||||| ||||||||| | ||||||||||||||||| ||||||||||  |||| |||| | |||||||||||    
T  6798014 cataatcgcaacttttttagaagataaggggtcaaaagatcatattttccttatgttagagggtcaaaa-atcatatttccct 6798095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 29051789 - 29051693
Alignment:
Q  137 ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttt 235  Q
    |||||||||| ||||||||||||||| | ||||||| ||||| |||| ||||| |||| |||| ||| ||||||||||  ||||||||||| |||||||    
T  29051789 ataatcgcaactttttgagaagataaggggtcaaaa-atcatttttctcttatattat-gggtcaaaggagcatatttttctaaacatgggatcacttt 29051693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 8527044 - 8526881
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||  ||| ||||||||||||| ||| ||   |||||||| |||||||||| | ||||| |||| ||||||  ||     
T  8527044 ctattaaaaaaatggcaattttggccctcttcatcccaaaattgctgagaagatgccacgtgtctcaaaaaaggggccataattgcaactttttgtaaaa 8526945  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    |||  | ||||||| | |||||||||||||||||| | ||| ||| |||||||||| |||||||||    
T  8526944 ataggg-gtcaaaa-agcatatttcccttatgttaggaggtcaaatgagcatattttcctaaacat 8526881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 5111720 - 5111619
Alignment:
Q  5 taaaaaggttaaactacacttttcgatctctaaattttaaaatattgcgatttt--aactctatt-taaaaaattacaattttggcccctttcttcccaa 101  Q
    |||||||| |||||||||||||| || | |||| ||||||||  ||||||||||    |||||||  |||||||||||||||||||||||||| || |||    
T  5111720 taaaaaggctaaactacactttttgacccctaagttttaaaaagttgcgatttttgccctctattaaaaaaaattacaattttggcccctttcgtcacaa 5111621  T
Q  102 aa 103  Q
    ||    
T  5111620 aa 5111619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 293
Target Start/End: Complemental strand, 5490559 - 5490517
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    |||||||||||||||||||||||| |||| |||||||||||||    
T  5490559 agggggccaaaatcgcaactttttgaaacataaggggtgaaaa 5490517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 23658771 - 23658821
Alignment:
Q  8 aaaggttaaactacacttttcgatctctaaattttaaaatattgcgatttt 58  Q
    |||||||||||| |||||||||||| |||| ||||||||| ||||||||||    
T  23658771 aaaggttaaactgcacttttcgatccctaagttttaaaatgttgcgatttt 23658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 19493564 - 19493617
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    ||||||| |||||||||||| ||||||||||||| ||| |||||||||| ||||    
T  19493564 tagggggtcaaaatcgcaacattttaaaacttaaagggcgaaaaatgcagttta 19493617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 116 - 228
Target Start/End: Complemental strand, 23473183 - 23473070
Alignment:
Q  116 cacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    |||||||||||||| || |||||||||| ||| ||||||| |||||||     ||||||| ||||||||||||| ||||  |||| |||| | || ||||    
T  23473183 cacgtgtcccaaaacagaggtcataatcacaactttttgaaaagataagataccaaaagagcatatttcccttaagttagagggtcaaaataacacattt 23473084  T
Q  215 ccctaaacatgggg 228  Q
    || |||||||||||    
T  23473083 ccttaaacatgggg 23473070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 46265923 - 46265878
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    ||||||||||||||||| |||||| |||||||||||||||| ||||    
T  46265923 cttagggggccaaaatcccaacttcttaaaacttaaggggttaaaa 46265878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 221
Target Start/End: Complemental strand, 47113315 - 47113202
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| |||||||||||||| |||| | | |||||||| |||||   ||||||||| | ||||||||| ||||||||| | | ||  |||  |||||||    
T  47113315 aagacgccacgtgtcccaaaacaggggccaaaatcgcaactttttataaagataaagggccaaaagatcttatttccctaaagatagagggccaaaagag 47113216  T
Q  208 catatttccctaaa 221  Q
    ||||||||||||||    
T  47113215 catatttccctaaa 47113202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 1921039 - 1921004
Alignment:
Q  201 aaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||||||||||||||||||||||||| |||||||||    
T  1921039 aaaagagcatatttccctaaacatggagtcactttt 1921004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 303
Target Start/End: Complemental strand, 4193603 - 4193556
Alignment:
Q  256 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    ||||||||||||||||||||||| |||||| ||| ||| |||||||||    
T  4193603 gccaaaatcgcaactttttaaaatttaaggagtgtaaagtgcacttta 4193556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 317
Target Start/End: Original strand, 31494158 - 31494225
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaaac 317  Q
    |||||||||||||||||||| |||| |||| ||  | | |||||||||| ||||||||||||| ||||    
T  31494158 tagggggccaaaatcgcaacattttgaaacatagagtgcgaaaaatgcagtttagccaataaataaac 31494225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 3227637 - 3227695
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||| ||||| ||| ||| |||| ||||| ||||||||||||    
T  3227637 cttagggggccaaaattgcaagtttttgaaagttagggggggaaaagtgcactttagcc 3227695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 293
Target Start/End: Original strand, 4436132 - 4436170
Alignment:
Q  255 ggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    |||||||||||| ||||||||||||||||||||| ||||    
T  4436132 ggccaaaatcgctactttttaaaacttaaggggtaaaaa 4436170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 279
Target Start/End: Original strand, 9477447 - 9477477
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaac 279  Q
    |||||||||||||||||||||||||||||||    
T  9477447 ttagggggccaaaatcgcaactttttaaaac 9477477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 3769593 - 3769486
Alignment:
Q  120 tgtcccaaaaaagggtcataatcgcaa-ttttttgagaagataaagag-tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccc 217  Q
    |||||| |||| || |||||||||||| |||||||  ||||||| ||| |||||| | |||||||| | ||||||| ||||| |||| |||||||||| |    
T  3769593 tgtcccgaaaagggatcataatcgcaacttttttgtaaagataa-gagatcaaaa-agcatatttctcatatgttaaggggtcaaaaaagcatatttctc 3769496  T
Q  218 taaacatggg 227  Q
    ||||||||||    
T  3769495 taaacatggg 3769486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 6650655 - 6650614
Alignment:
Q  195 ggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||| ||||||||||||||||||||| |||||||| |||||    
T  6650655 ggggtcaaaagagcatatttccctaaatatggggtccctttt 6650614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 296
Target Start/End: Complemental strand, 7313126 - 7313081
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatg 296  Q
    ||||||||||||| |||||||||  ||||||||||||| |||||||    
T  7313126 agggggccaaaattgcaacttttgcaaacttaaggggtaaaaaatg 7313081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Original strand, 23373669 - 23373722
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||||||  ||||||||||| |||||||||||| |||| ||||||| |||||||    
T  23373669 tagggggttaaaatcgcaacattttaaaacttagggggcgaaaaatacacttta 23373722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Complemental strand, 29051675 - 29051634
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcac 299  Q
    ||||||| ||||||||||||||||||||| |||||| |||||    
T  29051675 caaaatcacaactttttaaaacttaagggttgaaaagtgcac 29051634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 8527042 - 8527098
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| |||  || |||| ||||| ||||||||||||    
T  8527042 tagggggccaaaatcgcaacattttgaaatatagggggcgaaaagtgcactttagcc 8527098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 20636675 - 20636643
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaactta 282  Q
    |||||||||||||||||||| ||||||||||||    
T  20636675 tagggggccaaaatcgcaacattttaaaactta 20636643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 20636866 - 20636922
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  20636866 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 20636922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 20638547 - 20638515
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaactta 282  Q
    |||||||||||||||||||| ||||||||||||    
T  20638547 tagggggccaaaatcgcaacattttaaaactta 20638515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 27869252 - 27869196
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  27869252 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 27869196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 42271580 - 42271636
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| ||||| ||||| ||||||||| || |||| ||||| ||||||||||||    
T  42271580 tagggggcaaaaattgcaacattttaaaacatagggggcgaaaagtgcactttagcc 42271636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 6e-50; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 75 - 311
Target Start/End: Complemental strand, 21185440 - 21185203
Alignment:
Q  75 ttacaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaa 171  Q
    |||||||||||||||||||   | |||||||||| |||   || | ||||| ||||||||||||||||||||||| ||||||||||||||  | ||||||    
T  21185440 ttacaattttggccccttttggctcaaaattgctgagaagccgcctcgtgttccaaaaaagggtcataatcgcaactttttgagaagatagggggtcaaa 21185341  T
Q  172 agatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatcgcaactt 271  Q
    |||||||||||  |||||||||  |||| |||||| ||||||||||||||||||||||||||||||| |       | |||| |||||||| ||||||||    
T  21185340 agatcatattt-tcttatgtta-agggtcaaaagaacatatttccctaaacatggggtcacttttatcatttttttcataggaggccaaaagcgcaactt 21185243  T
Q  272 tttaaaacttaaggggtgaaaaatgcactttagccaataa 311  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  21185242 tttaaaacttaagggatgaaaaatgcactttagcctataa 21185203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 226
Target Start/End: Complemental strand, 16972151 - 16971933
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgctaag 111  Q
    |||||| |||||||||  | |||| ||||||||| ||||||||||| | |  |||| ||||||| ||||||||||||| |||| | ||||||||||||||    
T  16972151 taaactgcacttttcgccccctaagttttaaaatgttgcgattttagccccctattaaaaaaatgacaattttggcccatttcgttccaaaattgctaag 16972052  T
Q  112 a---cgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |   || || ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||  ||||||    
T  16972051 aaaacgccatgtgtcccaaaataggggtcataatcgcaatattttgagaagataaagagtcaaaaggtcatatttcccttatgttagggggtctaaagag 16971952  T
Q  208 catatttccctaaacatgg 226  Q
    ||||| |||||||||||||    
T  16971951 catatatccctaaacatgg 16971933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 290
Target Start/End: Original strand, 4455043 - 4455332
Alignment:
Q  12 gttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaa-ttacaattttggcccctttcttcccaaaattgct 108  Q
    |||||||| |||||||||| | |||| ||||||||| ||||||||||| |||  |||| |||||| |||||||||||| |  |||| |||||||||||||    
T  4455043 gttaaactgcacttttcgacccctaagttttaaaatgttgcgattttagctccttattaaaaaaaattacaattttggtctttttcgtcccaaaattgct 4455142  T
Q  109 aagacga---cacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaa 204  Q
     ||| ||   ||| ||||||||||||  || ||||||||||| |||||||||||||||   ||||||| |||||||||||||||||||| ||||| ||||    
T  4455143 gagaagatgccacatgtcccaaaaaaatggccataatcgcaactttttgagaagataagtggtcaaaaaatcatatttcccttatgttacggggtcaaaa 4455242  T
Q  205 gagcatatttccctaaacat--ggggtcacttttat--aannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtga 290  Q
    |||||||||| |||||||||  ||| |||||||| |  |        | ||| |||||||||||||||||||||||||||||||||||||    
T  4455243 gagcatattttcctaaacattggggatcacttttgtcaattttttttcatagagggccaaaatcgcaactttttaaaacttaaggggtga 4455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 63 - 308
Target Start/End: Original strand, 29182055 - 29182304
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgac---acgtgtcccaaaaaa-gggtcataatcgcaattttttgagaag 158  Q
    |||||||||||||||| ||||||||| ||||| || |||||||||| ||| |||   ||||||| ||||||| ||| ||||||||||| ||| |||||||    
T  29182055 ctatttaaaaaattactattttggcctctttcgtctcaaaattgctgagaagacgcaacgtgtctcaaaaaatgggccataatcgcaactttatgagaag 29182154  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttaggggg 256  Q
    |||| | |||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||  |||||||||||| | |       | | ||||     
T  29182155 ataaggggtcaaaagatcatatttcccttatgtta-ggggtcaaaagagcatatttctctaaacataaggggtcacttttgtcatttttttcat-gggga 29182252  T
Q  257 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||||| |||||||||||| ||||| |||||||| ||||||||| ||||    
T  29182253 ccaaaatcgtaactttttaaaatttaagaggtgaaaagtgcactttatccaa 29182304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 305
Target Start/End: Original strand, 2260439 - 2260677
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||||||||||||| || |||| | | |||||| ||   |||||| ||||| ||||||||||||| ||| |||||||| ||||||||||||||| |    
T  2260439 aaaaaattacaattttggtccatttcgttctaaaattactgagaagacgccacgtatcccaaaaaaggggtcagaatcgcaactttttgagaagataagg 2260538  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatc 264  Q
     || |||| |||||||||||||||| ||||||||| |||| |||||||||| |||||||||||||||||||| | |       | || |||  |||||||    
T  2260539 ggttaaaatatcatatttcccttatattatggggtcaaaaaagcatatttcactaaacatggggtcacttttgtca-ttttttcata-gggatcaaaatc 2260636  T
Q  265 gcaactttttaaaacttaaggggtgaaaaatgcactttagc 305  Q
    |||||||||||||||||||||| |||||| |||||||||||    
T  2260637 gcaactttttaaaacttaagggatgaaaagtgcactttagc 2260677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 16551714 - 16551877
Alignment:
Q  79 aattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaa-aagggtcataatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    ||||||||| |||||| |||||||||||||   |||||| |||||||||||||| ||||| ||||||||||| ||||||||||||||| | |||||||||    
T  16551714 aattttggcacctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacaagggccataatcgcaactttttgagaagataaggggtcaaaaga 16551813  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||||||||  || |||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  16551814 tcatatttgtctgatgttagggggtcaaaagagcatatttccctaaacattgggggtcactttt 16551877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 18606688 - 18606917
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaa--ctctatttaaaaaattacaattttggcccctttcttcccaaaattgctaag 111  Q
    |||||| |||||||||  || ||||||||||||| ||| |||||  |  | ||||| ||||||| |||||||||||||||||| |||| || ||||| ||    
T  18606688 taaactgcacttttcgccctttaaattttaaaatgttgtgatttcgatcccctattaaaaaaatgacaattttggcccctttcgtcccgaa-ttgctgag 18606786  T
Q  112 acgac---acgtgtcccaaaa-aagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
      |||   ||||||||||||| |||||| |||||| ||| ||||||||||||||| | ||||||||||| ||||| |||||||||||||||| |||||||    
T  18606787 cagacgctacgtgtcccaaaacaagggtgataatcacaactttttgagaagataaggggtcaaaagatcgtattttccttatgttatggggtcaaaagag 18606886  T
Q  208 catatttccctaaacat--ggggtcactttt 236  Q
    |||||||||||||||||  ||||||||||||    
T  18606887 catatttccctaaacatgaggggtcactttt 18606917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 19077980 - 19078157
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| |||||||||||| ||||||  |||    
T  19077980 ctattaaaaaaatggcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaag 19078079  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  19078080 ataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 19078157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 19125870 - 19126047
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| |||||||||||| ||||||  |||    
T  19125870 ctattaaaaaaatggcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaag 19125969  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  19125970 ataaggggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 19126047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 69 - 308
Target Start/End: Original strand, 46432277 - 46432522
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| |||||||||||||   |||| | ||||||||||| ||||||| |||||||||||| ||||||  ||||||| |    
T  46432277 aaaaaatagcaattttggcccctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagg 46432376  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt-ataannnnnnncttagggggccaaa 261  Q
     ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||   |          ||||||||||||    
T  46432377 ggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgccattttttttaatagggggccaaa 46432475  T
Q  262 atcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||| |||| |||||||||||| ||||| || |||||||||||    
T  46432476 atcgcaacattttgaaacttaaggggcgaaaagtggactttagccaa 46432522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 4059583 - 4059741
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||| ||||||||||||||||| |||||||||||||   |||||| |||||||||||||||| || | |||||||||| ||||||  ||||||| |    
T  4059583 aaaaaattgcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaatggaccataatcgcaactttttgtaaagataagg 4059682  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | ||||||| |||||||||| | ||| ||||||||||||||||||||||||    
T  4059683 ggtcaaaaaa-catattttccttatgttaggaggtcaaaagagcatatttccctaaacat 4059741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 228
Target Start/End: Complemental strand, 9387893 - 9387773
Alignment:
Q  110 agacgacacgtgtcccaaaaaagg-gtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgtta-tggggttaaaagag 207  Q
    ||||| ||| |||||||||| ||| ||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||  ||||| |||||||    
T  9387893 agacgccacatgtcccaaaacaggtgtcataatcgcaaatttttgagaagataaagggtcaaaagattatatttcccttatgttaggggggtcaaaagag 9387794  T
Q  208 catatttccctaaacatgggg 228  Q
    ||||||||| |||||||||||    
T  9387793 catatttccttaaacatgggg 9387773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 43706715 - 43706886
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtccc-aaaaaagggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| |||||||||||||   |||| | ||||||||||  |||| ||||||||||||||| ||||||  ||||||| |    
T  43706715 aaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccggaaaaggggtcataatcgcaactttttgtaaagataagg 43706814  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||||||||||    
T  43706815 ggtcaaaa-aacatatttcccttatgttat-gggtcaaaagagcatatttccctaaacatagggggtcactttt 43706886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 24750032 - 24749869
Alignment:
Q  78 caattttggcccctttcttcccaaaattgctaagacgac---acgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||||||| ||  ||||||||||||| |||   |||||| |||||||| ||| ||||||||||| ||||||  ||||||| | |||||||     
T  24750032 caattttggcccctttcatctaaaaattgctaagaagacgccacgtgttccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa- 24749934  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    | |||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  24749933 agcatatttcccttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttt 24749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 48471924 - 48472082
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  48471924 aaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataagg 48472023  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||| ||||||||| | ||| ||||||||||||||||||||||||    
T  48472024 ggtcaaaa-agcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacat 48472082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 24196504 - 24196332
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | ||| |||||| ||||||  ||||||| |    
T  24196504 aaaaaatggcaattttggcccctttcgtccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccatattcgcaactttttgtaaagataagg 24196405  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||| ||||||  ||||||||||||||    
T  24196404 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttctctaaacatatggggtcactttt 24196332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 24962196 - 24962024
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||| ||||||| ||  |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  24962196 aaaaaatagcaattttggtccctttcatcaaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 24962097  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  24962096 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 24962024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 166 - 303
Target Start/End: Complemental strand, 21148121 - 21147980
Alignment:
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataa--nnnnnnncttagggggccaaa 261  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||| | |          | |||||||||||    
T  21148121 gtcaaaagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcacttttgtcattttttttcataagggggccaaa 21148022  T
Q  262 atcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||||||||||| ||||||||||||||||| | |||||||||    
T  21148021 atcgcaacttttaaaaacttaaggggtgaatactgcacttta 21147980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 2425473 - 2425296
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  |||||||||||| |||| ||||||||||||| ||| ||   ||||||||||| |||| ||||||||||||||| ||||||  |||    
T  2425473 ctattaaaaaaatagcaattttggcccatttcatcccaaaattgctcagaagatgccacgtgtcccagaaaatgggtcataatcgcaactttttgtaaag 2425374  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| |  | |||| | ||||||||||||||||||  |||| ||||||||||| |||||||||||| ||||||||||||    
T  2425373 ataagggttaaaaaaaacatatttcccttatgttagagggtcaaaagagcata-ttccctaaacataggggtcactttt 2425296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 224
Target Start/End: Original strand, 2657518 - 2657731
Alignment:
Q  16 aactacacttttcgatctctaaattttaaaatattgcgatttta--actctatt-taaaaaattacaattttggcccctttcttcccaaaattgctaag- 111  Q
    |||| |||||||||  || ||| ||||||||| |||||||||||   | |||||  |||||||| ||||||||||||||||  ||||||||||| | ||     
T  2657518 aacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctattaaaaaaaattgcaattttggccccttttgtcccaaaattgttgaga 2657617  T
Q  112 -acgacacgtgtcc-caaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagca 209  Q
     ||| |||||||||  ||||||||||||||||| ||| ||||| | ||||||| | ||||||||| ||||||| |||||||||| | ||| || ||||||    
T  2657618 aacgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatattt-ccttatgttaggcggtcaatagagca 2657716  T
Q  210 tatttccctaaacat 224  Q
    |||||||||||||||    
T  2657717 tatttccctaaacat 2657731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 224
Target Start/End: Complemental strand, 3617033 - 3616884
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||||||  ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| | |||||||     
T  3617033 caattttggccccttttatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaa 3616934  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    | |||||||||||||||| | | ||| ||||||||||||||||||||||||    
T  3616933 a-catatttcccttatgtgaagaggtcaaaagagcatatttccctaaacat 3616884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 232
Target Start/End: Complemental strand, 47685401 - 47685178
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgctaag 111  Q
    ||||||||||| || | ||  ||| ||||||||| |||| ||||| ||||  |||| |||||| | ||||||| |||||||||  |||||||||||||||    
T  47685401 taaactacactatttgctccataacttttaaaatgttgcaatttttactccctattaaaaaaaatgcaatttttgcccctttcggcccaaaattgctaag 47685302  T
Q  112 acgac---acgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    | |||   |||||||| ||||||| |||||| ||||||| ||||||  ||| ||| | ||||||| | ||||||| |||||||||| ||| | |||| ||    
T  47685301 aagacgccacgtgtcctaaaaaagaggtcattatcgcaactttttgtaaaggtaaggggtcaaaaaa-catattttccttatgttaggggatcaaaatag 47685203  T
Q  208 catatttccctaaacatggggtcac 232  Q
    ||||||||| |||||||||||||||    
T  47685202 catatttccttaaacatggggtcac 47685178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 228
Target Start/End: Complemental strand, 22786260 - 22786111
Alignment:
Q  79 aattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagat 175  Q
    ||||||||||| |||| || ||||||||||   |||||| || ||||||||||| |||| |   ||| ||| ||||||||||||||| | ||||||||||    
T  22786260 aattttggcccatttcgtctcaaaattgctgagaagacgccaagtgtcccaaaacaggggcc--atcacaactttttgagaagataaggggtcaaaagat 22786163  T
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
    |||||||| ||||||||| |  || ||||||||||||||||||||||||||||    
T  22786162 catatttcacttatgtta-gatgtcaaaagagcatatttccctaaacatgggg 22786111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 137 - 308
Target Start/End: Complemental strand, 10684965 - 10684792
Alignment:
Q  137 ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgtta-tggggttaaaagagcatatttccctaaac-atggggtcactt 234  Q
    |||||||||| ||||||||||||||| | |||||||||||||||||  |||||||||  ||||| || |||| |||||||||||||| ||||||||||||    
T  10684965 ataatcgcaactttttgagaagataaggggtcaaaagatcatatttttcttatgttaggggggtcaatagagtatatttccctaaacaatggggtcactt 10684866  T
Q  235 ttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||   |         |||||| | ||||| ||||| ||||||||||||||||| ||||||| || |||||||||    
T  10684865 ttgccatttttttaataggggactaaaattgcaacattttaaaacttaaggggcgaaaaatacagtttagccaa 10684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 223
Target Start/End: Original strand, 27092913 - 27093070
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||| |||| |||||||||||||   |||||| ||||||| ||||||||||| | ||||| |||| ||||||  ||||||| |    
T  27092913 aaaaaatggcaattttggcccatttcatcccaaaattgctgagaagacgccacgtgttccaaaaaaggggccataattgcaactttttgtaaagataagg 27093012  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca 223  Q
     ||||||| | |||||||| | ||| ||| ||||| |||||||||||||||||||||||    
T  27093013 ggtcaaaaaa-catatttcacatatattagggggtcaaaagagcatatttccctaaaca 27093070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 51719177 - 51719354
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtccca-aaaaagggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||| ||||||| | |||||||||||   |||| | ||||| || || |||| ||||||||||||||| ||||||  |||    
T  51719177 ctattaaaaaaatagcaattttggtccctttcattccaaaattgctcagaagatgccacgtatctcagaaaaggggtcataatcgcaactttttgtaaag 51719276  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||  ||| | ||||||| |||||||||| ||| | ||||||||||||||||||||||||  ||||||||||||    
T  51719277 ataaggggt--aaaaaacatattttccttatgttaggggatcaaaagagcatatttccctaaacataaggggtcactttt 51719354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 29676322 - 29676164
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||||||| ||  ||||||| | |||   || ||||||||||||||||||| | |||||||||| |||||   ||||||| |    
T  29676322 aaaaaataacaattttggcccctttcatcaaaaaattgttgagaaggcgccacgtgtcccaaaaaaggggccataatcgcaactttttataaagataagg 29676223  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||| ||||||||| | | | | ||||||||||||||||||||||    
T  29676222 ggtcaaaa-agcatatttcacttatgttaggagatcacaagagcatatttccctaaacat 29676164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 21148255 - 21148122
Alignment:
Q  7 aaaaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaa-ttacaattttggcccctttcttcccaaaa 103  Q
    |||||| |||||| |||||||||| | |||||||||||||| ||||||||||  | |  |||| |||||| |||||||| ||||||||||| ||||||||    
T  21148255 aaaaggataaactgcacttttcgacccctaaattttaaaatgttgcgattttggccccctattaaaaaaaattacaattatggcccctttcgtcccaaaa 21148156  T
Q  104 ttgct---aagacgacacgtgtcccaaaaaaggg 134  Q
     ||||   || ||| |||||||||||||||||||    
T  21148155 ctgctgagaaaacgccacgtgtcccaaaaaaggg 21148122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 35067047 - 35067103
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  35067047 tagggggccaaaatcgcaactttttgaaacttaaggggggaaaagtgcactttagcc 35067103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 51684422 - 51684365
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    |||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||    
T  51684422 tagggggccaaaattgcaactttttaaaagttaaggggggaaaagtgcactttagcca 51684365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 11190434 - 11190385
Alignment:
Q  257 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||||||    
T  11190434 ccaaaattgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 11190385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 14601740 - 14601796
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||| ||| |||||||    
T  14601740 tagggggtcaaaatcgcaacattttaaaacttagggggtgaaaaacgcagtttagcc 14601796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 307
Target Start/End: Complemental strand, 28637162 - 28637106
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    |||| |||||||||||||||||||||||| ||||||||||||| |||| || |||||    
T  28637162 agggagccaaaatcgcaactttttaaaacataaggggtgaaaagtgcatttaagcca 28637106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 315
Target Start/End: Original strand, 36613947 - 36614014
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaa 315  Q
    ||||||||||||||||  ||| ||||||||| ||| |||  |||||||||||||||||||||| ||||    
T  36613947 cttagggggccaaaattacaagtttttaaaagttaggggaggaaaaatgcactttagccaatatagaa 36614014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Complemental strand, 2260427 - 2260377
Alignment:
Q  257 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    ||||||||||||| ||||||||||||||||  ||||| |||||||||||||    
T  2260427 ccaaaatcgcaacattttaaaacttaagggtcgaaaagtgcactttagcca 2260377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 28552361 - 28552299
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 312  Q
    |||||| ||||||||||||| |||| ||||||| |||| ||||| |||||||||| |||||||    
T  28552361 taggggaccaaaatcgcaacattttgaaacttagggggcgaaaagtgcactttagtcaataaa 28552299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 29182057 - 29181999
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||||||||||  ||||||||| |||||||| ||||||||| | ||||||||||||    
T  29182057 tagggggccaaaattacaactttttgaaacttaaagggtgaaaagtacactttagccaa 29181999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 28920727 - 28920884
Alignment:
Q  79 aattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggt--cataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||| |||||||| ||| |||||||||   |||||| ||| |||||||||||||||   ||||||||| | ||||||  ||||||| | |||||||     
T  28920727 aattttgacccctttcatccaaaaattgctgagaagacgccacatgtcccaaaaaagggggccataatcgccactttttgtaaagataaggggtcaaaa- 28920825  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    | ||||||      |||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  28920826 agcatatt------atgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 28920884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 34500462 - 34500409
Alignment:
Q  167 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 220  Q
    ||||||||||||||||| || | ||||  |||||||||||||||||||||||||    
T  34500462 tcaaaagatcatatttcactaaagttagagggttaaaagagcatatttccctaa 34500409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 4059578 - 4059522
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  4059578 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 4059522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 12390034 - 12390082
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||| ||| |||||| | ||||||||||||||||||    
T  12390034 caaaatcgcaactttttgaaagttaaggagggaaaaatgcactttagcc 12390082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 16972098 - 16972154
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| ||||||||||| |||||||||||| |||| ||||| |||| |||||||    
T  16972098 tagggggctaaaatcgcaacattttaaaacttagggggcgaaaagtgcagtttagcc 16972154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 21946642 - 21946700
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaa-tgcactttagccaa 308  Q
    |||||| |||||||||||||||||| |||||||| |||||||||| ||| ||||||||||    
T  21946642 taggggaccaaaatcgcaacttttttaaacttaa-gggtgaaaaattgctctttagccaa 21946700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 31426161 - 31426208
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    ||||||| ||||||||||||||||||||| |||| |||||||| ||||    
T  31426161 agggggctaaaatcgcaactttttaaaacataagaggtgaaaagtgca 31426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 2940313 - 2940264
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  2940313 caaaatcacaacattttaaaacttaagggg-gaaaaatacactttagccaa 2940264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 39698621 - 39698563
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| | || ||||||||| |||||||| | ||| ||||||||||||    
T  39698621 cttagggggccaaaattgaaagtttttaaaagttaaggggggtaaagtgcactttagcc 39698563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 36612902 - 36612853
Alignment:
Q  257 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||| ||||| ||| |||||||| ||||||||||||||||||    
T  36612902 ccaaaattgcaaatttttgaaagttaaggggggaaaaatgcactttagcc 36612853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 39151987 - 39151934
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    ||||||||||||||  ||| ||||| ||||||||||||  ||||||||||||||    
T  39151987 tagggggccaaaattacaagtttttgaaacttaagggggaaaaaatgcacttta 39151934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 287
Target Start/End: Complemental strand, 51945578 - 51945541
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaagggg 287  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  51945578 tagggggccaaaatcccaactttttcaaacttaagggg 51945541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 6606956 - 6607000
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    ||||||||||||||||||||||||| ||||  |||||||| ||||    
T  6606956 ttagggggccaaaatcgcaacttttgaaaaaataaggggtcaaaa 6607000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 18106819 - 18106891
Alignment:
Q  116 cacgtgtcccaaaaaa-gggtcataatcgcaa-ttttttgagaagataaagagtcaaaagatcatatttccct 186  Q
    |||||||||||||||| ||| ||||||||||| |||||||  ||||||| |  |||||||| |||||||||||    
T  18106819 cacgtgtcccaaaaaaggggccataatcgcaatttttttgcaaagataagggatcaaaagagcatatttccct 18106891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 21945763 - 21945708
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||| ||||||||| ||||||||||||||||||| ||| ||||| | ||||||||||    
T  21945763 taggaggccaaaattgcaactttttaaaacttaaaggg-gaaaagtacactttagcc 21945708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 24196509 - 24196565
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||||||||| || | || ||||| |||| |||||||    
T  24196509 tagggggccaaaatcgcaacattttaaaacataggaggcgaaaagtgcagtttagcc 24196565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 28920899 - 28920955
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| ||||||| |||| ||||| || | |||||||    
T  28920899 tagggggccaaaatcgcaacattttgaaacttagggggcgaaaagtgaagtttagcc 28920955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 308
Target Start/End: Complemental strand, 45148639 - 45148579
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||| |||| ||||| ||| ||||| ||  |||| ||||||||||||||    
T  45148639 cttagggggccaaaattgcaagtttttgaaagttaagcgggaaaaagtgcactttagccaa 45148579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 46432272 - 46432216
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| || | |||| || |||| ||||| ||||||||||||    
T  46432272 tagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 46432216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 312
Target Start/End: Original strand, 50681655 - 50681711
Alignment:
Q  256 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 312  Q
    |||||||| |||| ||||| ||| ||||| || ||||| ||||||||||||||||||    
T  50681655 gccaaaattgcaagtttttgaaaattaagaggggaaaagtgcactttagccaataaa 50681711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 51685814 - 51685866
Alignment:
Q  254 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||||||| ||| |||  ||| ||||| ||||||||||||    
T  51685814 gggccaaaatcgcaactttttgaaagttagagggggaaaagtgcactttagcc 51685866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 14 - 306
Target Start/End: Complemental strand, 4098957 - 4098657
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaac--tctatttaaaaaattacaattttggcccctttcttcccaaaattgct--- 108  Q
    |||||| ||||||| || |||||| ||||||||| ||||||||||  |  |||||| ||||| ||| |||| ||||||||||| |||||||||||         
T  4098957 taaactgcactttttgacctctaagttttaaaatgttgcgattttggccctctattaaaaaatttataattatggcccctttcgtcccaaaattgacgag 4098858  T
Q  109 aagacgacacgtgtcccaaaaaagggtcat-aatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| ||||||||||||||||||| | | ||| |||| ||||||||||||||| | |||||||||||||||||||||||||||| ||||| |||||||    
T  4098857 aagacgccacgtgtcccaaaaaaggggccttaattgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgttagggggtcaaaagag 4098758  T
Q  208 catatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagc 305  Q
    |||||||||| ||||||  |||||||||||| |           ||||||| ||||||| ||| ||||||||||||||| |||||||| |||||||||||    
T  4098757 catatttcccaaaacatagggggtcacttttgtcgtttttttaatagggggtcaaaatcacaattttttaaaacttaagaggtgaaaagtgcactttagc 4098658  T
Q  306 c 306  Q
    |    
T  4098657 c 4098657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 9 - 222
Target Start/End: Original strand, 24626220 - 24626438
Alignment:
Q  9 aaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc-tatttaaaaaattacaattttggcccctttcttcccaaaattgc 107  Q
    |||| |||||| |||||||||  |||||| ||||||||| |||||||||| || | |||| ||||||| ||| |||||||||| ||| |||||||||||     
T  24626220 aaggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttgacccctattaaaaaaatgacatttttggccccattcgtcccaaaattgt 24626319  T
Q  108 taagacgacacg---tgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaa 203  Q
    ||||| |||||    |||||||||| | ||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||| | || |||    
T  24626320 taagaagacaccacatgtcccaaaacatgggtcataatcacaactttttgagaagataaggagtcaaaagatcatatttcccttatgttattgagtcaaa 24626419  T
Q  204 agagcatatttccctaaac 222  Q
    |||||||||||||||||||    
T  24626420 agagcatatttccctaaac 24626438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 307
Target Start/End: Original strand, 51291230 - 51291473
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||||| |||||| |||| |||| || |||||||| |   |||||| ||| ||||||||||||||| | |||||| ||| ||||||||||||||| |    
T  51291230 aaaaaattataatttttgcccatttcgtcacaaaattggtgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgagaagataagg 51291329  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttat-aannnnnnncttagggggccaaaat 263  Q
     |||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||| |||||||||| | |        | |  |||||||||||    
T  51291330 ggtcaaaagatcatatttcccttatgttagggggtcaaaagaacatatttccctaaacatgaggtcacttttgtcattttctttcattaggggccaaaat 51291429  T
Q  264 cgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
     ||||||||||||||||||||||||||||| || ||||||||||    
T  51291430 tgcaactttttaaaacttaaggggtgaaaattggactttagcca 51291473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 14 - 306
Target Start/End: Original strand, 20919338 - 20919632
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaa--ctctatttaaaaaattacaattttggcccctttcttcccaaaattgct--- 108  Q
    |||||| |||||||||| | |||| ||| ||||| ||||||||||    ||||||| |||||||||||||||||||   |||| |||||||||||||       
T  20919338 taaactgcacttttcgacccctaagtttcaaaatgttgcgattttggttctctattaaaaaaattacaattttggctagtttcgtcccaaaattgctgag 20919437  T
Q  109 aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| ||| |||||||||| |||| |||||||| ||| |||| |||||||||| | |||  |||||||||||| ||| || |||| |||| |||||||    
T  20919438 aagacgtcacatgtcccaaaagagggatcataatcacaactttt-gagaagataaggggtcctaagatcatattttcct-at-ttatagggtcaaaagag 20919534  T
Q  208 catatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||| || |||||||| | |       | || || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20919535 catatttccctaaacattggatcacttttgtcatttttttcata-ggagtcaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 20919632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 35475532 - 35475362
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||| ||||||||||||| |||| ||| |||||||||   |||||| ||||||||||||||||||| |||||||||| | ||||||  ||||||| |    
T  35475532 aaaaaatgacaattttggcccatttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgctactttttgtaaagataagg 35475433  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||    
T  35475432 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggtcactttt 35475362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 13826474 - 13826651
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| |||||||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  |||    
T  13826474 ctattaaaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaag 13826573  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||| |||||| ||||||||||||    
T  13826574 ataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacataggggtcactttt 13826651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 82 - 236
Target Start/End: Original strand, 15058892 - 15059051
Alignment:
Q  82 tttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatca 177  Q
    ||||||||||||| |||||||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| | ||||||| | ||    
T  15058892 tttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaaagataaggggtcaaaa-agca 15058990  T
Q  178 tatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  15058991 tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 15059051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 236
Target Start/End: Original strand, 13397703 - 13397908
Alignment:
Q  39 ttttaaaatattgcgattttaactc--tatttaaaaaatta-caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag 132  Q
    ||||||||| ||||||||||| | |  |||| |||||| || ||||||||||||| ||| ||| |||||||||   |||||| |||||||||||||||||    
T  13397703 ttttaaaatgttgcgattttagccccctattaaaaaaaatagcaattttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaag 13397802  T
Q  133 ggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggt 229  Q
    || | |||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  |||||    
T  13397803 gggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggt 13397901  T
Q  230 cactttt 236  Q
    |||||||    
T  13397902 cactttt 13397908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 5304408 - 5304579
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| || ||||||||||   |||||| |||||||||||||||| ||| ||||||||||| ||||||  ||||||| |    
T  5304408 aaaaaatggcaattttggcccccttcatcgcaaaattgctgagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataagg 5304507  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | ||||||| |||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  5304508 ggtcaaaa-agcatattttccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 5304579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 25011984 - 25011806
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| | ||||||||||| ||| ||   ||||||||||||||||||| |||||||| ||| ||||||  |||    
T  25011984 ctattaaaaaaatagcaattttggcccctttcattccaaaattgctcagaagatgccacgtgtcccaaaaaagggatcataatcccaactttttgtaaag 25011885  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||  ||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  25011884 ataaggggtcaaaaaa-catatcccccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 25011806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 39 - 224
Target Start/End: Original strand, 1588443 - 1588631
Alignment:
Q  39 ttttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgac---acgtgtcccaaaaaagg 133  Q
    ||||||||||||||||||||  | |  |||| |||||||  |||||||||||| |||||| |||||| |||||||| |||   ||||||||||||||  |    
T  1588443 ttttaaaatattgcgattttgcccccttattaaaaaaatggcaattttggcccttttctttccaaaactgctaagaagacgtcacgtgtcccaaaaagag 1588542  T
Q  134 gtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    |  |||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1588543 gctataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgtta-ggggtcaaaagagcatatttccctaaacat 1588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 19232404 - 19232563
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  ||||||| |    
T  19232404 aaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagg 19232503  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     || |||| | ||||||| |||||||||| || || ||||||||||||||||||||||||    
T  19232504 ggtaaaaaaaacatattttccttatgttagggagtcaaaagagcatatttccctaaacat 19232563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 43793692 - 43793864
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||| |||| |||||||||||||   |||||| ||| ||||||||||||||| ||||| |||||| ||||||  || |||| |    
T  43793692 aaaaaatggcaattttggcccatttcgtcccaaaattgctgagaagacgccacatgtcccaaaaaaggggtcatattcgcaactttttgtaaatataagg 43793791  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  43793792 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcactttt 43793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 27018457 - 27018286
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||| |||| |||||||||||||   |||||| ||||||||||||||||||| | ||||| |||| ||||||  | ||||| |    
T  27018457 aaaaaatggcaattttggcccatttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaggataagg 27018358  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||| ||||| ||||| ||||||||||||||||||||||||  |||||||||||    
T  27018357 ggtcaaaaaa-catatttcccttttgttagggggtcaaaagagcatatttccctaaacatatgggtcactttt 27018286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 36729143 - 36729270
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaag 158  Q
    ||||| ||||||||| |||||||||||||||| |||||||||| ||   |||||| ||| ||||||||||||  ||||||||||| || |||||||||||    
T  36729143 ctattaaaaaaattataattttggcccctttcatcccaaaattactgagaagacgccacatgtcccaaaaaaaaggtcataatcgaaactttttgagaag 36729242  T
Q  159 ataaagagtcaaaagatcatatttccct 186  Q
    |||| | |||||||||||||||||||||    
T  36729243 ataaggggtcaaaagatcatatttccct 36729270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 224
Target Start/End: Complemental strand, 45633735 - 45633522
Alignment:
Q  16 aactacacttttcgatctctaaattttaaaatattgcgatttta--actctatt-taaaaaattacaattttggcccctttcttcccaaaattgctaag- 111  Q
    |||| |||||||||  || ||| ||||||||| |||||||||||   | |||||  |||||||| ||||||||||||||||  ||||||||||| | ||     
T  45633735 aacttcacttttcgccctttaagttttaaaatgttgcgattttagccccctattaaaaaaaattgcaattttggccccttttgtcccaaaattgttgaga 45633636  T
Q  112 -acgacacgtgtcc-caaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagca 209  Q
     ||| |||||||||  ||||||||||||||||| ||| ||||| | ||||||| | ||||||||| ||||||| |||||||||| | ||| || ||||||    
T  45633635 aacgccacgtgtcctaaaaaaagggtcataatcacaacttttttaaaagataaggggtcaaaagagcatattt-ccttatgttaggcggtcaatagagca 45633537  T
Q  210 tatttccctaaacat 224  Q
    |||||||||||||||    
T  45633536 tatttccctaaacat 45633522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 75 - 236
Target Start/End: Original strand, 6209306 - 6209474
Alignment:
Q  75 ttacaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaagggt---cataatcgcaattttttgagaagataaagagtc 168  Q
    |||||||||||||||||||| | ||||||||||| ||| |||||   ||||||||||||| |||   |||| | |||| ||||||||||||||| | |||    
T  6209306 ttacaattttggcccctttcgttccaaaattgctgagaagacaccacgtgtcccaaaaaaaggtggccatagttgcaactttttgagaagataaggggtc 6209405  T
Q  169 aaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca--tggggtcactttt 236  Q
    | |||||||| |||||||||||||| ||||| ||||  ||||| |||||||||||  |||||||||||||    
T  6209406 ataagatcatttttcccttatgtta-ggggtcaaaaatgcataattccctaaacatgtggggtcactttt 6209474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 6789019 - 6789191
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtccc-aaaaaagggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| |||||||||| ||||||||| ||||||||||||||||||  ||||||| |    
T  6789019 aaaaaatggcaattttggcccccttcatcccaaaattgctaagaagacgccacgtgtcccaaaaaaaggggcataatcgcaattttttgtaaagataacg 6789118  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | ||| |||| || |||||| | |||  ||| |||||||||||||||||||  ||||||||||||    
T  6789119 ggtcaaaa-aacatttttctctcatgttaggaggtcgaaacagcatatttccctaaacatagggggtcactttt 6789191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 41877099 - 41877259
Alignment:
Q  79 aattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    |||||||||||||||| ||  |||||||||   |||||| ||||||||| ||||||||| |||||||||||| ||| | |  |||||| | ||||||| |    
T  41877099 aattttggcccctttcatcaaaaaattgctgaaaagacgccacgtgtcctaaaaaaggggtcataatcgcaactttgtaa--agataaggggtcaaaa-a 41877195  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  41877196 gcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 41877259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 4357545 - 4357340
Alignment:
Q  21 cacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacga 115  Q
    |||||||||  | ||| |||| ||||| |||||||||| || |  |||| |||||||  ||||||||||||| ||| | | |||||||||   ||||||     
T  4357545 cacttttcgccccctatatttcaaaatgttgcgattttgaccccctattaaaaaaatggcaattttggcccccttcattctaaaattgctgagaagacgc 4357446  T
Q  116 cacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    || ||||||||||||| ||| ||||||||||| ||||||  ||||||| | ||||||| | ||||||||||||||||||   ||| ||||||||||||||    
T  4357445 caggtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagaaggtcaaaagagcatattt 4357347  T
Q  215 ccctaaa 221  Q
    |||||||    
T  4357346 ccctaaa 4357340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 195 - 304
Target Start/End: Original strand, 36729247 - 36729357
Alignment:
Q  195 ggggttaaaagagcatatttccctaaacatg-gggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    ||||| |||||| |||||||||||||||||| ||||||||||| | |       | ||||| | ||||||||||||||||||||||||||||||||||||    
T  36729247 ggggtcaaaagatcatatttccctaaacatgagggtcacttttgtcaattttttcatagggagtcaaaatcgcaactttttaaaacttaaggggtgaaaa 36729346  T
Q  294 atgcactttag 304  Q
    |||||||||||    
T  36729347 atgcactttag 36729357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 236
Target Start/End: Original strand, 9195787 - 9195896
Alignment:
Q  127 aaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-- 224  Q
    |||| ||||||||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||||      
T  9195787 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttatggg-tcaaaagagcatatttccctaaacatag 9195884  T
Q  225 ggggtcactttt 236  Q
    ||||||||||||    
T  9195885 ggggtcactttt 9195896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 236
Target Start/End: Original strand, 4433253 - 4433416
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    |||||||| ||  |||| |||||||||||||   |||| | ||||||||| | ||||||| |||||||| ||| ||||||  ||||||| | |||||||     
T  4433253 caattttgacctatttcatcccaaaattgctcataagatgccacgtgtcctagaaaaggggtcataatcacaactttttgtaaagataaggggtcaaaaa 4433352  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    | ||||||| |||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  4433353 a-catattttccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 4433416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 227
Target Start/End: Complemental strand, 9397421 - 9397273
Alignment:
Q  82 tttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcat 178  Q
    ||||||||||||  ||||||||||| | |||   || ||||||||| |||||| |||||||||  ||| ||||||  ||||||||| || |||| | |||    
T  9397421 tttggcccctttagtcccaaaattgttgagaacacggcacgtgtccgaaaaaaaggtcataatgacaactttttgtaaagataaagggttaaaaaaacat 9397322  T
Q  179 atttcccttatgttatggggttaaaagagcatatttccctaaacatggg 227  Q
    |||||| ||||||||  |||| ||||||||||||||||||| |||||||    
T  9397321 atttcctttatgttagagggtcaaaagagcatatttccctatacatggg 9397273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 2931490 - 2931391
Alignment:
Q  139 aatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||||||||||||||  ||||||| | ||||||| | ||||||||| |||||||||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  2931490 aatcgcaattttttgtaaagataaggggtcaaaa-agcatatttcctttatgttatgaggtcaaaagagcatatttccctaaacatagggggtcactttt 2931392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 23362621 - 23362504
Alignment:
Q  119 gtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccc 217  Q
    |||||||||||||||| |||||||||||| ||||||  ||||||| ||| | ||| | ||||||| ||||||||||  |||| |||||| ||||||||||    
T  23362621 gtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataa-gagactaaaaagcatattttccttatgttaaagggtcaaaagaacatatttccc 23362523  T
Q  218 taaacatggggtcactttt 236  Q
    |||| |||||||| |||||    
T  23362522 taaatatggggtcgctttt 23362504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 25618689 - 25618809
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||||  ||||||||| ||||||| ||| |||||||||   |||||| ||||||||||||||| ||| ||||||||| | ||||||  ||||||| |     
T  25618689 aaaaaatagcaattttggtccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaggggccataatcgccactttttgtaaagataaggg 25618788  T
Q  166 gtcaaaagatcatatttccct 186  Q
    ||||||||| |||||||||||    
T  25618789 gtcaaaagagcatatttccct 25618809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 306
Target Start/End: Complemental strand, 55780567 - 55780387
Alignment:
Q  127 aaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-- 224  Q
    |||| ||||||||||||||| ||||||  ||||||| | ||||||| | ||||||| ||||| |||| ||||| ||||||||||||||||||||||||      
T  55780567 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttaggtta-ggggtcaaaagagcatatttccctaaacatag 55780470  T
Q  225 ggggtcactttt-ataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||   |          |||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||    
T  55780469 ggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55780387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 306
Target Start/End: Complemental strand, 55844747 - 55844567
Alignment:
Q  127 aaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-- 224  Q
    |||| ||||||||||||||| ||||||  ||||||| | ||||||| | ||||||| ||||| |||| ||||| ||||||||||||||||||||||||      
T  55844747 aaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttaggtta-ggggtcaaaagagcatatttccctaaacatag 55844650  T
Q  225 ggggtcactttt-ataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||   |          |||||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||    
T  55844649 ggggtcacttttgccattttttttaatagggggccaaaatcgcaacatttgaaaacttaaggggcgaaaaatgaagtttagcc 55844567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 219
Target Start/End: Original strand, 2715821 - 2715930
Alignment:
Q  109 aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| |||||||||||||||| ||| ||||||||||| ||||||  ||||||| | ||||||| | |||||||||| ||||||| ||||| ||||||     
T  2715821 aagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccatatgtta-ggggtcaaaagat 2715918  T
Q  208 catatttcccta 219  Q
    ||||||||||||    
T  2715919 catatttcccta 2715930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 109 - 216
Target Start/End: Complemental strand, 52838427 - 52838321
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    ||||||||||||||| |||||||||| | |||||||||| ||||||  ||||||| | ||||||| | |||||||||| ||||||| | ||| |||||||    
T  52838427 aagacgacacgtgtctcaaaaaagggaccataatcgcaactttttgtaaagataagg-gtcaaaa-agcatatttcccgtatgttaggaggtcaaaagag 52838330  T
Q  208 catatttcc 216  Q
    |||||||||    
T  52838329 catatttcc 52838321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 41034836 - 41034707
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| ||||||| ||||||||||| | |||||||||| ||||||  || |||| | ||||||| | |||||||||||||||||| | ||| ||||||     
T  41034836 aagacgccacgtgttccaaaaaagggactataatcgcaactttttgtaaaaataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagat 41034738  T
Q  208 catatttccctaaacat--ggggtcactttt 236  Q
    ||||||||||| | |||  ||||||||||||    
T  41034737 catatttccctgagcatagggggtcactttt 41034707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 9397437 - 9397495
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||||||||||| |||| |||||||||||| |||||||||| |||| |||||||||    
T  9397437 tagggggccaaaatcccaacattttaaaacttagggggtgaaaagtgcagtttagccaa 9397495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 47869903 - 47869811
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaatttttt 152  Q
    ||||| |||||||  ||||| ||||| | ||| |||||||||||||   |||||| ||||||| ||||||||||||||||||||||| |||||    
T  47869903 ctattaaaaaaatggcaattctggcctccttcatcccaaaattgctgagaagacgccacgtgttccaaaaaagggtcataatcgcaacttttt 47869811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 248 - 309
Target Start/End: Original strand, 10471431 - 10471492
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 309  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| |||||||||||||||    
T  10471431 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagccaat 10471492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 214
Target Start/End: Complemental strand, 15795562 - 15795412
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataa 162  Q
    |||||||| | | ||||| ||| ||||| ||||||||||| |   |||||| ||| ||||| |||||| ||||||||||| ||| ||||||| |||||||    
T  15795562 ttaaaaaaatgcgattttagcctctttcgtcccaaaattgatgagaagacgccacatgtcctaaaaaatgggtcataatcccaactttttgaaaagataa 15795463  T
Q  163 agagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    |  ||||||| | | |||||||||||||||| | | | ||||||||||||||    
T  15795462 aaggtcaaaa-agcctatttcccttatgttaggagttcaaaagagcatattt 15795412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 7540200 - 7540272
Alignment:
Q  116 cacgtgtcccaaaaaaggg-tcataatcgcaattttt-tgagaagataaagagtcaaaagatcatatttccct 186  Q
    ||||||||||||||||||| ||||||||| ||||||| ||  ||||||||| ||||||||| |||||||||||    
T  7540200 cacgtgtcccaaaaaaggggtcataatcggaatttttatgcaaagataaagggtcaaaagagcatatttccct 7540272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 48158734 - 48158678
Alignment:
Q  171 aagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggg 227  Q
    |||| ||||||||||||||||||  |||| |||||| ||||||||||||||||||||    
T  48158734 aagagcatatttcccttatgttagagggtcaaaagatcatatttccctaaacatggg 48158678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 308
Target Start/End: Original strand, 1964486 - 1964544
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||| | |||||||||||| |||||||  ||||| ||||||||||||||    
T  1964486 tagggggccaaaattgtaactttttaaaagttaagggtggaaaagtgcactttagccaa 1964544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 312
Target Start/End: Original strand, 2715963 - 2716025
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 312  Q
    |||||| ||||||||||||| |||||||| ||||| | |||||| |||| |||||||||||||    
T  2715963 taggggaccaaaatcgcaacattttaaaatttaagagatgaaaagtgcagtttagccaataaa 2716025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 287
Target Start/End: Original strand, 10758741 - 10758779
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaagggg 287  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10758741 ttagggggccaaaatcgcaactttttaaaagttaagggg 10758779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 13394592 - 13394534
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||| ||||||||||| ||||||||| || |||| ||||| ||||||||||||||    
T  13394592 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13394534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 13394597 - 13394665
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg 134  Q
    ||||||| |||||||||||||| ||| ||| |||||||||   |||||| |||||||||||||||||||    
T  13394597 aaaaaatgacaattttggcccccttcatccgaaaattgctgagaagacgccacgtgtcccaaaaaaggg 13394665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 13397731 - 13397673
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||| ||||||||||| ||||||||| || |||| ||||| ||||||||||||||    
T  13397731 tagggggctaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 13397673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 1961172 - 1961228
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||||||||  ||||||| ||||| |||| ||||||||||||    
T  1961172 tagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcc 1961228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 1963252 - 1963196
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||| ||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  1963252 taggaggccaaaattgcaactttttgaaagttaaggggggaaaagtgcactttagcc 1963196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 3928903 - 3928959
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  3928903 tagggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 3928959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 43793687 - 43793631
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||||||||| || |||| ||||| |||| |||||||    
T  43793687 tagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 43793631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 6209270 - 6209227
Alignment:
Q  263 tcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||    
T  6209270 tcgcaactttttaaaacttatgggatgaaaaatacactttagcc 6209227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 287
Target Start/End: Complemental strand, 37831650 - 37831611
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaagggg 287  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  37831650 cttagggggccaaaatcgcaacttcttaaaacttaggggg 37831611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 3927720 - 3927666
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||| |||||||| |||  ||| ||||| ||||||||||||    
T  3927720 gggggccaaaatcgcaacattttaaaagttagagggggaaaagtgcactttagcc 3927666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 13826280 - 13826314
Alignment:
Q  259 aaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    |||||||||||||||||||||||||||||| ||||    
T  13826280 aaaatcgcaactttttaaaacttaaggggttaaaa 13826314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 24175986 - 24175936
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||| ||||| ||||||||||| ||||||| ||||| ||||||||||||||    
T  24175986 gggggcaaaaccgcaacttttttaaacttagggggtaaaaaatgcacttta 24175936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 48780306 - 48780248
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||| |||||| |||| ||||||||| ||| |||| ||||| ||||||||||||    
T  48780306 cttagggggtcaaaattgcaagtttttaaaagttagggggggaaaagtgcactttagcc 48780248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 50909726 - 50909776
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||||||||||||||||||||| || |  |||| ||||||||||||||    
T  50909726 caaaatcgcaactttttaaaacttagggtggaaaaagtgcactttagccaa 50909776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 14804464 - 14804423
Alignment:
Q  195 ggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||    
T  14804464 ggggtcaaaagagtatatttccctaaacatgggatcactttt 14804423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 58
Target Start/End: Complemental strand, 4099090 - 4099046
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgatttt 58  Q
    |||||| ||||||| || |||||||||||||||| ||||||||||    
T  4099090 taaactgcactttttgacctctaaattttaaaatgttgcgatttt 4099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 309
Target Start/End: Original strand, 4433433 - 4433488
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 309  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| || | ||||||||||    
T  4433433 ggggccaaaatcgcaacattttaaaactt-aggggcgaaaagtgaagtttagccaat 4433488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 13826476 - 13826420
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  13826476 tagggggtcaaaatcgcaacatttttaaacatagggggcgaaaagtgcactttagcc 13826420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 19750618 - 19750673
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 304  Q
    |||||||||||||||| |||| ||||||||| || ||||| ||||| ||||||||||    
T  19750618 cttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 19789188 - 19789133
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 304  Q
    |||||||||||||||| |||| ||||||||| || ||||| ||||| ||||||||||    
T  19789188 cttagggggccaaaattgcaagtttttaaaagtt-aggggggaaaagtgcactttag 19789133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 35475347 - 35475291
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||| |||||||||||||| ||||||||||||  ||| |||||||| | |||||||    
T  35475347 tagggagccaaaatcgcaacattttaaaacttagagggcgaaaaatgaagtttagcc 35475291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 48158800 - 48158852
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    ||||||||||||||||| |||||||||||| |||| | ||  |||||||||||    
T  48158800 ttagggggccaaaatcgtaactttttaaaagttaatgtgtctaaaatgcactt 48158852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 5e-47; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 21 - 293
Target Start/End: Complemental strand, 23320654 - 23320380
Alignment:
Q  21 cacttttcgatctctaaattttaaaatattgcgattttaa--ctctatttaaaaaa-ttacaattttggcccctttcttcccaaaattgct---aagacg 114  Q
    |||||||||| | |||| ||||||||| |||||||||| |  | ||||| |||||| |||||||||||||||||||| |||||||||||||   ||||||    
T  23320654 cacttttcgaccactaagttttaaaatgttgcgattttgatcccctattaaaaaaaattacaattttggcccctttcgtcccaaaattgctgaaaagacg 23320555  T
Q  115 acacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
     ||| ||||||||||| ||| |||||| |||| |||||||||||||||  |||||| | |||| | ||| ||||||||| ||||| ||||||||||||||    
T  23320554 ccacatgtcccaaaaaggggccataatagcaactttttgagaagataagaagtcaatatatcagacttctcttatgtta-ggggtcaaaagagcatattt 23320456  T
Q  215 ccctaaacatggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    ||||||||||||| |||||||| | |       | || |||| ||||||||||||||||||||||||||||||||||||    
T  23320455 ccctaaacatgggatcacttttgtca--tttttcata-ggggtcaaaatcgcaactttttaaaacttaaggggtgaaaa 23320380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 63 - 293
Target Start/End: Complemental strand, 10743657 - 10743422
Alignment:
Q  63 ctatttaaaaaatta-caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaa 157  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||   |||| | |||||| |||| ||||||| |||||||||||| ||||||  ||    
T  10743657 ctattaaaaaaattagcaattttggcccctttcatcccaaaattgctcaaaagatgccacgtgacccagaaaaggggtcataatcgcaactttttgtaaa 10743558  T
Q  158 gataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggg 255  Q
    ||||| | ||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||  || ||||||||| | |         ||||||    
T  10743557 gataaggggtcaaaaaa-catatttcccttatgtta-ggggttaaaagagcatatttccctaaacatagggagtcacttttgtcatttttttaatagggg 10743460  T
Q  256 gccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    |||||||||||||| |||||||||||| |||| |||||    
T  10743459 gccaaaatcgcaacattttaaaacttagggggcgaaaa 10743422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 26628086 - 26628258
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| |||||||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  26628086 aaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 26628185  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  26628186 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 26628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 14 - 306
Target Start/End: Original strand, 40836183 - 40836482
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaa--ctctatttaaaaaattacaattttggcccctttcttcccaaaattgctaag 111  Q
    ||||||||||||||||  | |||| ||||||||| ||||||||||    ||||||| |||||||  | ||||||||||||||| | ||||||||||| ||    
T  40836183 taaactacacttttcgtcccctaagttttaaaatgttgcgattttggtcctctattaaaaaaatg-cgattttggcccctttcgttccaaaattgctgag 40836281  T
Q  112 a---cgacacgtgtcccaaaaaagggtc-ataatcgcaa--ttttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaag 205  Q
    |   || ||||||||||||||||||| | ||||||||||  ||||||||||  |||| | ||||||| | |||||||||||||| ||| ||||| |||||    
T  40836282 aagccgccacgtgtcccaaaaaaggggccataatcgcaactttttttgagat-ataaggggtcaaaaaa-catatttcccttatattagggggtcaaaag 40836379  T
Q  206 agcatatttccctaaacatggggtcacttttataannnnnnnct--tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    | |||||||||||||||||||||||||||||   |        |  ||||||| |||||||||||| |||||||||||| |||| |||||||||| ||||    
T  40836380 aacatatttccctaaacatggggtcacttttgccatttttttttaatagggggtcaaaatcgcaacattttaaaacttagggggcgaaaaatgcagttta 40836479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 80 - 236
Target Start/End: Original strand, 23428691 - 23428852
Alignment:
Q  80 attttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagat 175  Q
    ||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  ||||||| | ||||||| |     
T  23428691 attttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaa- 23428789  T
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  23428790 catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 23428852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 4522197 - 4522025
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtca-taatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| || ||||||||| ||||||  ||||||| |    
T  4522197 aaaaaatggcaattttggcccctttcatcctaaaattgctgagaagacgccacgtgtcccaaaaaaggggcaataatcgcaactttttgtaaagataagg 4522098  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||    
T  4522097 ggtcaaaa-agcatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatatggggtcactttt 4522025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 25022724 - 25022896
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  ||||||| |    
T  25022724 aaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataagg 25022823  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
      |||||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  25022824 gttcaaaaaa-catatatcccttatgttatggggtcaaaagagcatatttccctaaacatagggggtcactttt 25022896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 28173799 - 28173948
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||||||| |||||||||||||   |||| | ||||||||||| ||||||| |||||||||||| ||||||  ||||||| | |||||||     
T  28173799 caattttggcccctttcatcccaaaattgctcggaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaa 28173898  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  28173899 a-catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 28173948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 48907353 - 48907525
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| |||||||||||||   |||||| ||||||||||||||||||| | |||||||||| |||||   ||||||| |    
T  48907353 aaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttttaaagataagg 48907452  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  48907453 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 48907525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 116 - 236
Target Start/End: Complemental strand, 3781071 - 3780952
Alignment:
Q  116 cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    ||||||||||||||||||| ||||| |||||| ||||||  ||||||||| ||||||| | |||||||||||||||||| ||||| ||||||||||||||    
T  3781071 cacgtgtcccaaaaaaggggtcatattcgcaactttttgtaaagataaagggtcaaaa-agcatatttcccttatgtta-ggggtcaaaagagcatattt 3780974  T
Q  215 ccctaaacatggggtcactttt 236  Q
    ||||||||||||||||||||||    
T  3780973 ccctaaacatggggtcactttt 3780952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 27852807 - 27852984
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaaga 159  Q
    ||||| |||||||  ||||||||||||| |||  |||||||||| |   |||||| ||||||||||||||| ||| ||||||||||| ||||||  ||||    
T  27852807 ctattaaaaaaatggcaattttggcccccttcagcccaaaattgttgagaagacgccacgtgtcccaaaaaggggccataatcgcaactttttgtaaaga 27852906  T
Q  160 taaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  27852907 taaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 27852984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 36311394 - 36311223
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||||||||||| | ||| ||   |||||||||||||| | ||| | ||||||||| | ||||||||||||| |    
T  36311394 aaaaaatggcaattttggcccctttcgtcccaaaattgttgagaagaagccacgtgtcccaaaatatgggccgtaatcgcaactatttgagaagataagg 36311295  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     || ||||  ||||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||||||||    
T  36311294 ggttaaaatgtcatatttcccttatgttatggggtcaaaagagtatattttcctaaatatggggtcactttt 36311223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 3328874 - 3329046
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  3328874 aaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 3328973  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 236  Q
     ||||||||  |||||||||||||||||| | ||| ||||||||||||||||||||||  | ||||||||||||    
T  3328974 ggtcaaaagg-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacttagggggtcactttt 3329046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 28154943 - 28155101
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| |||||||||||||||| ||| ||||||||||| ||||||  |||||||      
T  28154943 aaaaaatggcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaagggccataatcgcaactttttgtaaagataaga 28155042  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  28155043 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 28155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 30155206 - 30155364
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||||||| ||  |||||||||   |||||| || |||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  30155206 aaaaaataacaattttggcccctttcatcaaaaaattgctgcgaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 30155305  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  30155306 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 30155364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 13081137 - 13080965
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacgac---acgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| ||||||||||||| ||| |||   || ||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  13081137 aaaaaatggcaattttggcccccttcatcccaaaattgctgagaagactccacatgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 13081038  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| ||  ||||||||||||    
T  13081037 ggtcaaaa-agcatatttcccttatgttatgaggtcaaaagagcatatttccctaaatatagggggtcactttt 13080965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 78 - 307
Target Start/End: Original strand, 46673117 - 46673351
Alignment:
Q  78 caattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaa-ttttttgagaagataaagagtcaaaa 172  Q
    ||||||||||||||||| ||||||||||||| ||| ||   ||||||||| | ||||||| |||||||||||| |||||||  ||||||| | |||||||    
T  46673117 caattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcctagaaaaggggtcataatcgcaacttttttgtaaagataaggggtcaaaa 46673216  T
Q  173 gatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaact 270  Q
       |||||||||||||||||| || || ||||||||||||||||||||||||  ||| ||||||||   |         ||||||| ||||||||||||     
T  46673217 a--catatttcccttatgttagggagtcaaaagagcatatttccctaaacataggggatcacttttgccatttttttaatagggggtcaaaatcgcaaca 46673314  T
Q  271 ttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    ||| ||||||||||||| ||||| || ||||||||||    
T  46673315 tttgaaaacttaaggggcgaaaagtggactttagcca 46673351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 20001958 - 20001780
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  |||||||| ||| |||| ||||||||||| |   |||||| ||||||| |||||| |||| | ||| |||||| ||||||||||     
T  20001958 ctattaaaaaaatagcaattttgccccttttcatcccaaaattgttgagaagacgccacgtgttccaaaacaggggccatagtcgcaactttttgagaat 20001859  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | | ||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  20001858 ataagggg-caagagatcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 20001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 22416577 - 22416403
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||| ||| ||||||||||| |   |||||| ||||||||||||| ||||| ||||||| |||| ||||||  ||||||| |    
T  22416577 aaaaaatgacaattttggcccccttcgtcccaaaattgttgagaagacgccacgtgtcccaaataaggggtcataattgcaactttttgtaaagataatg 22416478  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat---ggggtcactttt 236  Q
     ||||||||| ||||||| ||||||||||   ||| |||||||||||| |||||||||||   ||||||||||||    
T  22416477 ggtcaaaagagcatatttaccttatgttagaaggtcaaaagagcatatatccctaaacattggggggtcactttt 22416403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 8339001 - 8339173
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| ||||||||||||||||| || ||||||||||| ||||||  ||||||| |    
T  8339001 aaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagaggccataatcgcaactttttgtaaagataagg 8339100  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | ||||||||  |||||||| | ||| |||| |||||||||||||||||||  ||||||||||||    
T  8339101 ggtcaaaa-agcatatttctattatgttaggaggtcaaaaaagcatatttccctaaacataaggggtcactttt 8339173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 8542844 - 8542681
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    |||||||||| || ||| |||||||||||||   |||||| |||||||| |||||||||| | ||||| |||| ||||||  ||||||| | |||||||     
T  8542844 caattttggctcccttcatcccaaaattgctgagaagacgccacgtgtcacaaaaaaggggccataattgcaactttttgtaaagataaggggtcaaaa- 8542746  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  8542745 agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 8542681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 64 - 236
Target Start/End: Complemental strand, 25179824 - 25179649
Alignment:
Q  64 tatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgacac-gtgtcccaaaaaagggtc-ataatcgcaattttttgagaagata 161  Q
    |||| |||||||  ||||| ||||||| ||| ||||||||||||| ||| ||| | |||||||||||||||| | |||||||||| ||||||  ||||||    
T  25179824 tattaaaaaaatggcaattatggcccccttcatcccaaaattgctgagaagacgccgtgtcccaaaaaaggggccataatcgcaactttttgtaaagata 25179725  T
Q  162 aagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    | | ||||||| | |||||||| |||| |||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  25179724 aggggtcaaaaaa-catatttctcttacgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 25179649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 236
Target Start/End: Complemental strand, 32315218 - 32314992
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaa-ctctatttaaaaaattacaattttggcccctttcttcccaaaattgct---a 109  Q
    |||||| |||||||||  |  ||| ||||||||| ||||||||||   | ||||| ||||||| ||||||||||  |||||| ||||||||||| |   |    
T  32315218 taaactgcacttttcgtcccttaagttttaaaatgttgcgattttcgtccctattaaaaaaatgacaattttgggtcctttcgtcccaaaattgttgaga 32315119  T
Q  110 agacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagc 208  Q
    ||||| ||| ||||| |||| | ||| |||| |||||  |||||||| |||||| | ||||||| || |||||||||| |||||| ||||| |||||| |    
T  32315118 agacgccacatgtcctaaaacatgggccata-tcgcagctttttgaggagataaggggtcaaaatataatatttccctcatgttagggggtcaaaagaac 32315020  T
Q  209 atatttccctaaacatggggtcactttt 236  Q
    |||||||||||||||||| |||||||||    
T  32315019 atatttccctaaacatggagtcactttt 32314992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 137 - 310
Target Start/End: Complemental strand, 25336527 - 25336354
Alignment:
Q  137 ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||||||||| ||||||||||| ||||  |||||||| ||||||||||||||||||| ||||| ||||||||||| ||||||||| || || ||||||||    
T  25336527 ataatcgcaactttttgagaagttaaaaggtcaaaaggtcatatttcccttatgttagggggtcaaaagagcataattccctaaatataggttcactttt 25336428  T
Q  237 ataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaata 310  Q
     | |         || | ||||||||| ||||| |||| ||| |||||||| ||||| |||| |||||||||||    
T  25336427 gtcatttttttaataagaggccaaaattgcaacattttgaaatttaaggggcgaaaagtgcagtttagccaata 25336354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 9 - 223
Target Start/End: Original strand, 33279584 - 33279803
Alignment:
Q  9 aaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaa--ctctatttaaaaaattacaattttggcccctttcttcccaaaattg 106  Q
    |||| |||||| |||||||||  || ||| |||| |||| |||||||||||   | ||||| |||||||  |||||||| |||||||  ||| |||||||    
T  33279584 aaggctaaactgcacttttcgccctttaagttttgaaatgttgcgattttagacccctattaaaaaaatggcaattttgacccctttggtccaaaaattg 33279683  T
Q  107 ct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaa 202  Q
    ||   |||||| |||||||| ||||||| |||||||||||| || ||||  | || |||| |  |||||||| |||||||||||||||||| ||||| ||    
T  33279684 ctgagaagacgccacgtgtctcaaaaaaagggtcataatcgtaacttttgta-aatataagggatcaaaagagcatatttcccttatgttagggggtcaa 33279782  T
Q  203 aagagcatatttccctaaaca 223  Q
    |||||||||||| ||||||||    
T  33279783 aagagcatattttcctaaaca 33279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 68 - 224
Target Start/End: Original strand, 31039037 - 31039196
Alignment:
Q  68 taaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaa 163  Q
    |||||||||| |||||||||| ||||| ||| |||||||||   |||||| ||| ||| | ||||||||| | |||||||||| ||||| ||||||||||    
T  31039037 taaaaaattataattttggcctctttcgtccaaaaattgctgagaagacgccacatgttctaaaaaaggggctataatcgcaactttttaagaagataaa 31039136  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    | ||||  |||||||||||||| ||||||| ||||| |||||||||| ||| ||| |||||    
T  31039137 gggtcattagatcatatttcccatatgtta-ggggtcaaaagagcatgttttccttaacat 31039196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 26177017 - 26177187
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||  |||| ||||||||||||| ||| ||   |||  |||||||||||| || ||||||||||| ||||||  ||||||| |    
T  26177017 aaaaaatagcaattttggcctatttcgtcccaaaattgctgagaagaagccacaagtcccaaaaaagaggccataatcgcaactttttgtaaagataatg 26177116  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    || ||||| | |||||||||| |||||||  |||| |||| ||||||||||||| |||||||||||||||||    
T  26177117 agccaaaa-agcatatttcccctatgttagagggtcaaaatagcatatttccctgaacatggggtcactttt 26177187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 14 - 224
Target Start/End: Complemental strand, 1743550 - 1743334
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaa--ctctatt-taaaaaattacaattttggcccctttcttcccaaaattgct-- 108  Q
    |||||| ||||||||| || |||| ||||||||| ||||||||||    | ||||| ||||||||  ||||||| | ||||||  || ||||||||||      
T  1743550 taaactgcacttttcgctccctaagttttaaaatgttgcgattttggtcccctattataaaaaatagcaattttagtcccttttgtcacaaaattgctga 1743451  T
Q  109 -aagacgacacgtgtcccaaaa-aagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaaga 206  Q
     |||||| ||| |||||||||| || || | | ||||||| ||||||||||||||| | |||||||||||| |||| |||||||||| ||||| ||||||    
T  1743450 gaagacgccacatgtcccaaaacaatggcccttatcgcaactttttgagaagataaggggtcaaaagatcacattt-ccttatgttagggggtcaaaaga 1743352  T
Q  207 gcatatttccctaaacat 224  Q
    | |||||| |||||||||    
T  1743351 gtatattttcctaaacat 1743334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 122 - 236
Target Start/End: Complemental strand, 4776038 - 4775922
Alignment:
Q  122 tcccaaaa-aagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 220  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||| |  ||||| ||||||||||||| ||||| | ||||| |||| |||||||||||||||    
T  4776038 tcccaaaacaagggccataatcgcaactttttaagaagataagggatcaaaggatcatatttcccgtatgtgagggggtcaaaatagcatatttccctaa 4775939  T
Q  221 acat-ggggtcactttt 236  Q
    |||| ||||||||||||    
T  4775938 acatgggggtcactttt 4775922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 26633359 - 26633589
Alignment:
Q  9 aaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattg 106  Q
    |||| |||||| |||||||||  | |||| ||||||||| |||||||||| || |  |||| |||||| | | | ||||||||||||| ||| |||||||    
T  26633359 aaggctaaactgcacttttcgccc-ctaagttttaaaatgttgcgattttgaccccctattaaaaaaaatgcgactttggcccctttcgtccaaaaattg 26633457  T
Q  107 ctaagacga---cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaa 202  Q
    |  ||| |    |||||| |||||||||||| | |||||||||| ||||||  ||||||| | ||||||| | |||||||| ||||||||| ||||| ||    
T  26633458 ccgagaaggtgccacgtgccccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttctcttatgtta-ggggtcaa 26633555  T
Q  203 aagagcatatttccctaaacatggggtcactttt 236  Q
    ||||||||||||||||||| ||||||||| ||||    
T  26633556 aagagcatatttccctaaagatggggtcattttt 26633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 22500650 - 22500828
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||| ||||||||| ||| |||||| ||   |||||| ||||||||| ||||||||| | |||||||||| ||||||  ||     
T  22500650 ctattaaaaaaatatcaattttagcccctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaagggaccataatcgcaactttttgtaaat 22500749  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| |  |||||| | |||||||||||||||||| | ||| |||||||||||||| |||||||||  ||||||||||||    
T  22500750 ataagggatcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcactttt 22500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 312
Target Start/End: Complemental strand, 46719997 - 46719935
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 312  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  46719997 tagggggccaaaatcgcaactttttaaaagttaaggggggaaaaatgcactttagccattaaa 46719935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 32960698 - 32960823
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaaga 159  Q
    ||||| |||||||  ||||||||||||||||| |||||||||| ||   |||||| |||||||||||||||| || ||||||||||| ||||||  ||||    
T  32960698 ctattaaaaaaatggcaattttggcccctttcatcccaaaattactgagaagacgccacgtgtcccaaaaaaaggccataatcgcaactttttgtaaaga 32960797  T
Q  160 taaagagtcaaaagatcatatttccct 186  Q
    ||| | ||||||| | |||||||||||    
T  32960798 taaggggtcaaaa-agcatatttccct 32960823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 222
Target Start/End: Original strand, 34878590 - 34878746
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagg-gtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||| ||| |||| || ||||||||||   |||||| |||||||||||||||||| | |||||| | || ||||||  ||||||| |    
T  34878590 aaaaaatggcaattttgacccatttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggtgccataattgaaactttttgtaaagataagg 34878689  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac 222  Q
      |||||| | |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  34878690 gatcaaaa-agcatatttcccttatattagggggtcaaaagagcatatttccctaaac 34878746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 49657942 - 49658011
Alignment:
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| || |||||||||||    
T  49657942 gtcaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaatattgggtcactttt 49658011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 6927719 - 6927593
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||| ||||||||| |||||||||||||   |||| | |||||||||||||||| ||||||||||||||| ||||||  |||    
T  6927719 ctattaaaaaaatagcaattttagcccctttcatcccaaaattgctcagaagatgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaag 6927620  T
Q  159 ataaagagtcaaaagatcatatttccct 186  Q
    |||| | ||||||| | |||||||||||    
T  6927619 ataaggggtcaaaa-aacatatttccct 6927593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 32 - 225
Target Start/End: Original strand, 35201017 - 35201214
Alignment:
Q  32 ctctaaattttaaaatattgcgattttaac--tctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtccca 126  Q
    |||||| |||||||||||||  ||||| |   |||||| ||||||| |||||||||   |||||| ||||||||||| | ||| ||   ||| ||||| |    
T  35201017 ctctaagttttaaaatattgtaattttgataatctattaaaaaaatgacaattttgttacctttcatcccaaaattgttgagaagatgccacatgtccta 35201116  T
Q  127 aaaaagg-gtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg 225  Q
    ||| ||| | ||| |||| || ||||||||||||||| | ||||||| ||||||||||| ||||||||  |||| |||||||||| |||||| |||||||    
T  35201117 aaacaggagccatgatcgtaactttttgagaagataaggggtcaaaatatcatatttcctttatgtta--gggtcaaaagagcatgtttcccaaaacatg 35201214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 26126967 - 26127137
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||   ||| || ||||||||||   |||||| |||  |||| ||||||| || ||||||||||| ||||||  ||||||| |    
T  26126967 aaaaaatagcaattttggcctacttcgtcgcaaaattgctgagaagacgccacaagtccaaaaaaagaggccataatcgcaactttttgtaaagataagg 26127066  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     | ||||| | |||||||||| |||||||  |||| |||| | |||||||||||||||||||||||||||||    
T  26127067 ggccaaaa-agcatatttcccctatgttagagggtcaaaataacatatttccctaaacatggggtcactttt 26127137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 9496388 - 9496448
Alignment:
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||||||| ||||||||  |||| ||||||||||||||||||||||||| ||||||||||    
T  9496388 catatttcctttatgttagagggtcaaaagagcatatttccctaaacatgtggtcactttt 9496448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 22447801 - 22447963
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||| ||||||| ||| |||||| ||   |||||| ||||| ||| ||||||||| | |||||||||| ||||||  |||||| |     
T  22447801 aaaaaatagcaattttggaccctttcatccaaaaatttctgagaagacgccacgtatccaaaaaaaggggccataatcgcaactttttgtaaagatatat 22447900  T
Q  165 a----gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    |    ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  22447901 aaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 22447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 31039241 - 31039293
Alignment:
Q  254 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| || |||||||||||||||||||||||||||| ||||||||||||    
T  31039241 gggccaaagtcacaactttttaaaacttaaggggtgaaaagtgcactttagcc 31039293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 3821071 - 3821004
Alignment:
Q  120 tgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttccct 186  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||||| ||||||||| |||||||||||    
T  3821071 tgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaagggtcaaaagagcatatttccct 3821004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 63 - 228
Target Start/End: Complemental strand, 33105190 - 33105022
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  |||||||||||  |||| ||||||||||| |   |||||| |||||||||||||| | |||  ||||||| || |||||| ||||    
T  33105190 ctattaaaaaaatagcaattttggcctatttcatcccaaaattgatgagaagacgccacgtgtcccaaaacatgggaaataatcgaaactttttgggaag 33105091  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
    | || |  |||||| | |||||||| |||||| || | | | ||||||||||||||||||||||||||||    
T  33105090 aaaagggatcaaaataacatatttctcttatgata-gagatcaaaagagcatatttccctaaacatgggg 33105022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 238
Target Start/End: Complemental strand, 48860888 - 48860771
Alignment:
Q  123 cccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaa 221  Q
    |||| ||||||| |||||||||||| ||||||  ||||||| | ||||||| | ||||||||||||||||||   ||| |||| ||||||||||||||||    
T  48860888 cccagaaaagggatcataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagaaggtcaaaatagcatatttccctaaa 48860790  T
Q  222 cat--ggggtcacttttat 238  Q
    |||  ||||||| ||||||    
T  48860789 cataaggggtcatttttat 48860771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 3821026 - 3820986
Alignment:
Q  196 gggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  3821026 gggtcaaaagagcatatttccctaaacatggggtcactttt 3820986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 28263158 - 28263212
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||| |||||||| ||| |||| ||||| ||||||||||||    
T  28263158 gggggccaaaatcgcaacgttttaaaagttagggggggaaaagtgcactttagcc 28263212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 46387744 - 46387806
Alignment:
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    ||||||||||||||||||| ||| | |||||||||| ||||| ||||||| ||||||||||||    
T  46387744 tcatatttcccttatgttaggggatcaaaagagcatgtttccttaaacatgggggtcactttt 46387806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 47615591 - 47615649
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  47615591 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 47615649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 34296531 - 34296596
Alignment:
Q  156 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaa 221  Q
    ||||||||| ||||||||| ||||||||| | | ||||  |||| |||||||||||||||||||||    
T  34296531 aagataaagggtcaaaagagcatatttccataaagttagagggtcaaaagagcatatttccctaaa 34296596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 8542858 - 8542914
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||| |||| ||||||||| || || ||||||| ||||||||||||    
T  8542858 tagggggccaaaatcacaacattttaaaacatagggagtgaaaagtgcactttagcc 8542914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 19984905 - 19984849
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||| ||||| ||||||| |||| ||||| ||||||||||||    
T  19984905 tagggggccaaaattgcaagtttttgaaacttagggggggaaaagtgcactttagcc 19984849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 40630627 - 40630683
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||||||||  ||||||| ||||| |||| ||||||||||||    
T  40630627 tagggggccaaaattgcaacttttgcaaacttagggggtaaaaagtgcactttagcc 40630683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 46721265 - 46721321
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||  |||||||||||||||||||| ||| |||| ||||| ||||||||||||    
T  46721265 tagggggttaaaatcgcaactttttaaaagttagggggagaaaagtgcactttagcc 46721321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 51038835 - 51038891
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||| |||||||||||||| |||||||  ||||| ||||||||||||    
T  51038835 tagggggtcaaaattgcaactttttaaaagttaagggtggaaaagtgcactttagcc 51038891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 8338996 - 8338937
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 309  Q
    ||||||| |||||||||||| |||| |||| || |||| ||||| |||||||||||||||    
T  8338996 tagggggtcaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaat 8338937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 298
Target Start/End: Original strand, 44457445 - 44457492
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    |||||||||||||||||||||||| |||| || | |||||||||||||    
T  44457445 agggggccaaaatcgcaactttttgaaacataggaggtgaaaaatgca 44457492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 313
Target Start/End: Complemental strand, 50296262 - 50296199
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaag 313  Q
    |||||||||||||| |||||||||  ||||||||||||  |||| |||| ||||||| ||||||    
T  50296262 tagggggccaaaattgcaacttttgcaaacttaaggggcaaaaagtgcattttagcctataaag 50296199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 18388866 - 18388932
Alignment:
Q  171 aagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| |||||||  |||||| || ||||| |||||||||||||||||| ||||| ||||||||||||    
T  18388866 aagaacatatttatcttatggtagggggtcaaaagagcatatttcccttaacatgggggtcactttt 18388932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 306
Target Start/End: Complemental strand, 34319384 - 34319346
Alignment:
Q  268 actttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  34319384 acttttcaaaacttaaggggtgaaaaatacactttagcc 34319346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 43668565 - 43668511
Alignment:
Q  183 cccttatgttatggggttaaaagagcatatttccctaa-acatggggtcactttt 236  Q
    ||||||| |||  |||| |||||||||||||||||||| ||||||||||||||||    
T  43668565 cccttattttagagggtcaaaagagcatatttccctaacacatggggtcactttt 43668511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 310
Target Start/End: Complemental strand, 51470030 - 51469968
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaata 310  Q
    |||||||||||||||| |||| ||||| ||| ||| || | ||||| ||||||||||||||||    
T  51470030 cttagggggccaaaattgcaagtttttgaaaattagggagggaaaagtgcactttagccaata 51469968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 307
Target Start/End: Original strand, 784995 - 785040
Alignment:
Q  262 atcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    ||||||||||||||||||||||||||  | || |||||||||||||    
T  784995 atcgcaactttttaaaacttaagggggaacaagtgcactttagcca 785040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 318
Target Start/End: Original strand, 4776069 - 4776134
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaagaaact 318  Q
    ||||||||||||||||| ||||||| ||||  ||| ||||||| || ||||||||| ||| |||||    
T  4776069 ggggccaaaatcgcaacattttaaatcttagagggcgaaaaatccagtttagccaagaaaaaaact 4776134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 303
Target Start/End: Original strand, 8313882 - 8313931
Alignment:
Q  254 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||| ||| |||||||||| |||||| ||||||||||||| |||||||||    
T  8313882 gggctaaagtcgcaactttctaaaacataaggggtgaaaagtgcacttta 8313931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 8875959 - 8875906
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||| ||||| ||| ||||||  ||||||||||||||||| ||||||||||||    
T  8875959 ggggctaaaattgcagctttttcgaacttaaggggtgaaaagtgcactttagcc 8875906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 19986120 - 19986173
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||| |||| ||||| ||||||||| || ||||| ||||||||||||    
T  19986120 ggggccaaaattgcaagtttttgaaacttaagaggggaaaagtgcactttagcc 19986173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 25310322 - 25310355
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaa 283  Q
    |||||| |||||||||||||||||||||||||||    
T  25310322 taggggaccaaaatcgcaactttttaaaacttaa 25310355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 36311205 - 36311152
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||| |||||||||||| |||  ||||| |||| |||||||    
T  36311205 ggggccaaaatcgcaacattttaaaacttaggggacgaaaagtgcagtttagcc 36311152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 1743497 - 1743553
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||| ||||||||||||| |||||||||||| || | ||||| |||| |||||||    
T  1743497 taggggaccaaaatcgcaacattttaaaacttagggagcgaaaagtgcagtttagcc 1743553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 4522010 - 4521978
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaactta 282  Q
    |||||||||||||||||||| ||||||||||||    
T  4522010 tagggggccaaaatcgcaacattttaaaactta 4521978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 20001956 - 20002011
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| |||||| ||||| ||||| |||| |||||||    
T  20001956 tagggggccaaaatcgcaacattttgaaactt-aggggagaaaagtgcagtttagcc 20002011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 21698443 - 21698495
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    |||||||||| |||||||||| |||||||  ||||| ||| ||||||||||||    
T  21698443 ttagggggccgaaatcgcaacattttaaatgttaagaggtcaaaaatgcactt 21698495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 25179634 - 25179602
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaactta 282  Q
    |||||||||||||||||||| ||||||||||||    
T  25179634 tagggggccaaaatcgcaacattttaaaactta 25179602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 285
Target Start/End: Complemental strand, 26126958 - 26126926
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaagg 285  Q
    |||||||||||||||||||||||||| ||||||    
T  26126958 ggggccaaaatcgcaactttttaaaagttaagg 26126926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 26628273 - 26628329
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| |||||||  ||| |||||||| | |||||||    
T  26628273 tagggggccaaaatcgcaacattttgaaacttagagggcgaaaaatgaagtttagcc 26628329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 26633416 - 26633361
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||| ||||||||||| ||||| ||||| |||| |||||||    
T  26633416 tagggggtcaaaatcgcaacattttaaaactt-aggggcgaaaagtgcagtttagcc 26633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 28173785 - 28173729
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| || | |||| || |||| ||||| ||||||||||||    
T  28173785 tagggggccaaaatcgcaacattatgaaacatagggggcgaaaagtgcactttagcc 28173729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Original strand, 28173977 - 28174013
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggg 286  Q
    |||||||||||||||||||| |||| |||||||||||    
T  28173977 tagggggccaaaatcgcaacattttgaaacttaaggg 28174013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 455264 - 455107
Alignment:
Q  75 ttacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaa 170  Q
    ||||||||| |||||||||| |||||||||||||   |||||| ||| |||||||||||| ||||||||||||||| |||| |||||||||| | |||||    
T  455264 ttacaatttcggcccctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaatgggtcataatcgcaacttttagagaagataaggggtcaa 455165  T
Q  171 aagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
    ||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||    
T  455164 aagatcatatttcccttatgttagggggttaaaagaacatattttcctaaacatgggg 455107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 132 - 306
Target Start/End: Complemental strand, 455107 - 454929
Alignment:
Q  132 gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggt 229  Q
    |||||||||||  || |||| |||||||||| | ||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||  |||||    
T  455107 gggtcataatcaaaacttttagagaagataaggggtcaaaagatcgtatttcctttatgttagggggttaaaagagcatatttccctaaacatggggggt 455008  T
Q  230 cacttttataa--nnnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| | |         | ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||    
T  455007 cacttttgtcattttttttccatagggggccaaaatcacaactttttaaaacttaatgggtgaaaagtgcactttagcc 454929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 36464576 - 36464345
Alignment:
Q  10 aggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgc 107  Q
    |||||||||| |||||||||    |||| ||| ||||| |||||||||| |  |  |||| ||||||| |||||||||| || |||| ||||||||||||    
T  36464576 aggttaaactgcacttttcgcctcctaagtttcaaaatgttgcgattttgatcccttattaaaaaaatgacaattttggtccatttcgtcccaaaattgc 36464477  T
Q  108 taagacga---cacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaa 204  Q
    | ||| ||   |||||||| |||||||||| |   ||||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||    
T  36464476 tgagaagatgtcacgtgtctcaaaaaaggggccatatcgcaactttttgagaagataaggagtcaaaagattatatttcccttatgttagggggtcaaaa 36464377  T
Q  205 gagcatatttccctaaacatggggtcactttt 236  Q
    || |||||||||||||||||||||||||||||    
T  36464376 gatcatatttccctaaacatggggtcactttt 36464345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 69 - 306
Target Start/End: Original strand, 26829150 - 26829389
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacgac---acgtgtcccaaaaaagggt--cataatcgcaattttttgagaagataaa 163  Q
    ||||||||| |||||||||||||||| || |||||||| | ||| |||   |||| |||||||||||||   ||||||| ||| ||||||||| |||||     
T  26829150 aaaaaattataattttggcccctttcgtctcaaaattgttgagaagacgctacgt-tcccaaaaaagggggccataatcacaactttttgagatgataag 26829248  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaat 263  Q
    | |||||||||||||||||||||||||||| |||||  ||||||||||||||| |||||||| |||||||||| | |       | ||||||||||||||    
T  26829249 gggtcaaaagatcatatttcccttatgtta-ggggtccaaagagcatatttccttaaacatgaggtcacttttgtca-ttttttcatagggggccaaaat 26829346  T
Q  264 cgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||| |||||||||||||||| |||||| ||||||||||||    
T  26829347 cgcaacattttaaaacttaagggatgaaaagtgcactttagcc 26829389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 78 - 306
Target Start/End: Complemental strand, 28365744 - 28365512
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    |||||||| |||||||| |||||||||||||   |||||| || | ||||||||||| ||||||||||||||| ||||||||||||||| | || |||||    
T  28365744 caattttgccccctttcgtcccaaaattgctgagaagacgccatgcgtcccaaaaaaagggtcataatcgcaactttttgagaagataaggggttaaaag 28365645  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttat-aannnnnnncttagggggccaaaatcgcaactt 271  Q
    ||||||||||||| |||||| ||||| ||| ||||||||||||||||| || |||||||||||| | |        | || |||| ||||||||||||||    
T  28365644 atcatatttccctcatgtta-ggggtcaaacgagcatatttccctaaatataggggtcacttttgtcattttttttcata-ggggtcaaaatcgcaactt 28365547  T
Q  272 tttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||||| |||| |||||||    
T  28365546 tttaaaatttaaggggtgaaaagtgcattttagcc 28365512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 15700996 - 15700820
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  |||    
T  15700996 ctatttaaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaag 15700897  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactt 234  Q
    |||| | ||||||| | |||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||    
T  15700896 ataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 15700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 22191279 - 22191117
Alignment:
Q  78 caattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    ||||||||||||||||| ||||||||||||| |||   || |||||||||||||||||||||||||||| || ||||||  ||||||| | ||||||||     
T  22191279 caattttggcccctttcatcccaaaattgctgagaaggcgccacgtgtcccaaaaaagggtcataatcgtaactttttgtaaagataaggggtcaaaag- 22191181  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     |||||||||||||||||| |  || ||||||||||||||||||||||||  ||||||||||||    
T  22191180 gcatatttcccttatgttaggaagtcaaaagagcatatttccctaaacatagggggtcactttt 22191117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 306
Target Start/End: Complemental strand, 38716436 - 38716194
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  38716436 aaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 38716337  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcacttttataannnnnnncttagggggccaaaa 262  Q
     ||||||| | |||||||| ||||||||| | ||| ||||||||||||||||||||||  ||||||||||||||   |         ||||||| |||||    
T  38716336 ggtcaaaa-agcatatttctcttatgttaggaggtcaaaagagcatatttccctaaacatatggggtcacttttgccatttttttaatagggggtcaaaa 38716238  T
Q  263 tcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| ||||||||||||  ||||||||| || | |||||||    
T  38716237 tcgcaacattttaaaacttagagggtgaaaagtgaagtttagcc 38716194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 15735307 - 15735135
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||||||||||| |   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  15735307 aaaaaatggcaattttggcccctttcatcccaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 15735208  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||| ||||||  ||||||||||||    
T  15735207 ggtcaaaata-catatttcccttatgttacgaggtcaaaagagcatatttcccaaaacatagggggtcactttt 15735135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 9787804 - 9787644
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataa 162  Q
    ||||||||| |||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | ||||||| || ||||||  |||||||    
T  9787804 ttaaaaaatgacaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgtaactttttgtaaagataa 9787705  T
Q  163 agagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     | ||||||| | ||||||||||||||||||   ||| ||||||||||||||||||||||||    
T  9787704 ggggtcaaaa-agcatatttcccttatgttagcaggtcaaaagagcatatttccctaaacat 9787644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 18537883 - 18538061
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | ||||| |||| ||||||  |||    
T  18537883 ctattaaaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaag 18537982  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | ||||||||||| |||||||| ||| |||| |||||||||||||||||||  ||||||||||||    
T  18537983 ataaggggtcaaaa-agcatatttccctaatgttatgaggtcaaaaaagcatatttccctaaacatagggggtcactttt 18538061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 30714329 - 30714507
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| |||||||||||||   |||||| ||| ||||||||||||||| | |||||| ||| ||||||  |||    
T  30714329 ctattaaaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacgccacatgtcccaaaaaaggggccataatcacaactttttgtaaag 30714428  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||| ||||||  ||||||||||||    
T  30714429 ataacgggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttcccgaaacatagggggtcactttt 30714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 2986929 - 2986757
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| || |||||| ||||||||| | |||||||||| ||||||  ||||||| |    
T  2986929 aaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataagg 2986830  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  2986829 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 2986757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 9051089 - 9051246
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||||  ||||||||||||| ||| || ||||||||||   |||||| | ||||||||||||||||| ||||||||||| ||||||  |||||||       
T  9051089 aaaaaatggcaattttggcccccttcatctcaaaattgctgagaagacgccccgtgtcccaaaaaagggccataatcgcaactttttgtaaagataagag 9051188  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  9051189 gtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 9051246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 11176150 - 11175978
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||  ||||||| |||||||||||||   |||||| ||||||||||||||||||| | |||||| ||| ||||||  ||||||| |    
T  11176150 aaaaaatggcaattttgatccctttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaactttttgtaaagataagg 11176051  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  11176050 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 11175978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 25298862 - 25299034
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||| ||||||||||||| ||| ||||||||||| | ||| ||   ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  25298862 aaaaaattgcaattttggcccccttcatcccaaaattgttgagaagatgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 25298961  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
      |||||| | ||||||||| |||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  25298962 gatcaaaaaa-catatttcctttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcactttt 25299034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 25884248 - 25884410
Alignment:
Q  79 aattttggcccctttcttcccaaaattgctaagacgacacgt---gtcccaaaaaagggtca-taatcgcaattttttgagaagataaagagtcaaaaga 174  Q
    ||||||||||| |||| ||||||||||||| |||  ||||     ||||||||| |||| || ||||||||| ||||||||||||||| | || |||| |    
T  25884248 aattttggcccttttcgtcccaaaattgctgagaaaacactacacgtcccaaaacaggggcaataatcgcaactttttgagaagataaggggttaaaata 25884347  T
Q  175 tcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    ||||||||||||||||||| ||| |||||| | |||||||| |||||||| ||||||||||||    
T  25884348 tcatatttcccttatgttaggggattaaaataacatatttctctaaacatgggggtcactttt 25884410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 4588042 - 4587932
Alignment:
Q  127 aaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-- 224  Q
    |||| ||||||||||||||| ||||||  ||||||| | || |||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||      
T  4588042 aaaaggggtcataatcgcaactttttgtaaagataaggggttaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatag 4587944  T
Q  225 ggggtcactttt 236  Q
    ||||||||||||    
T  4587943 ggggtcactttt 4587932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 6763778 - 6763950
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtca-taatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||| || |||  |||||||||||||   |||||| ||||||||||||||||||| |  ||||||| | ||||||  ||||||| |    
T  6763778 aaaaaatggcaattttggtccattttatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccgtaatcgctactttttgtaaagataagg 6763877  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | ||||||| |||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  6763878 ggtcaaaa-agcatattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 6763950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 331889 - 331783
Alignment:
Q  132 gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg--ggt 229  Q
    ||||||||||||||| ||||||  ||||||| |  |||||| | ||||||||||||| ||||  |||| ||||||||||||||||||||||||||  |||    
T  331889 gggtcataatcgcaactttttgcaaagataatggatcaaaaaagcatatttcccttaagttagagggtcaaaagagcatatttccctaaacatggaaggt 331790  T
Q  230 cactttt 236  Q
    |||||||    
T  331789 cactttt 331783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 4104893 - 4105045
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaa 172  Q
    ||||||||| ||| |||| |||||||||||||   |||||| ||||||| || |||||||| |||||||||||| ||||||  || |||| | |||||||    
T  4104893 acaattttgacccatttcgtcccaaaattgctgagaagacgccacgtgttcctaaaaaggggtcataatcgcaactttttgtaaatataaggtgtcaaaa 4104992  T
Q  173 gatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgg 226  Q
    || |||||| ||||||||||| | ||| ||||||  ||||||||||||| ||||    
T  4104993 gagcatattccccttatgtta-gaggtcaaaagaatatatttccctaaatatgg 4105045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 12350304 - 12350101
Alignment:
Q  21 cacttttcgatctctaaattttaaaatattgcgattttaact--ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacga 115  Q
    |||||||||| |  ||||||||||||| ||||||||||  |   ||||| ||||||||||||| ||  |||||||| || ||||||| ||   ||||||     
T  12350304 cacttttcgacccgtaaattttaaaatgttgcgattttggcctcctattaaaaaaattacaatctttacccctttcgtctcaaaattactgacaagacgc 12350205  T
Q  116 cacgtgtcccaaaaaaggg-tcat--aatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatat 212  Q
    ||| ||| ||||||||| | ||||  |||||||| |||||||||||||||    |||||| |||||||||||||||  ||| ||||| ||||||||||||    
T  12350204 cacatgttccaaaaaagagatcatttaatcgcaactttttgagaagataa----tcaaaatatcatatttcccttacctta-ggggtcaaaagagcatat 12350110  T
Q  213 ttccctaaa 221  Q
    |||||||||    
T  12350109 ttccctaaa 12350101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 211
Target Start/End: Complemental strand, 17368465 - 17368314
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| ||| |||| || |   |||||| ||||||||||||||||||| | ||||| |||| ||||||  |||    
T  17368465 ctattaaaaaaatagcaattttggcccctttcatccaaaaaatgttgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaag 17368366  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcata 211  Q
    |||| | ||||||| | |||||||||||||||||| | ||| |||||||||||    
T  17368365 ataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcata 17368314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 2190722 - 2190606
Alignment:
Q  120 tgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccct 218  Q
    |||||||||| | ||||||||| ||||| ||||||  ||||||| | | |||| || ||||||| ||||| ||||  |||| ||||||||||||||||||    
T  2190722 tgtcccaaaatatgggtcataaccgcaactttttgtaaagataaggggccaaacgagcatattttccttaagttagagggtcaaaagagcatatttccct 2190623  T
Q  219 aaacatggggtcactttt 236  Q
    |||||| |||||||||||    
T  2190622 aaacat-gggtcactttt 2190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 15700803 - 15700747
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  15700803 taggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 15700747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 30714331 - 30714275
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||||||||| || |||| ||||| ||||||||||||    
T  30714331 tagggggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttagcc 30714275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 167 - 236
Target Start/End: Complemental strand, 43301796 - 43301726
Alignment:
Q  167 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaac--atggggtcactttt 236  Q
    |||||||||||||||||||||| |||| ||||| |||||| |||| ||||||||||  ||||||||||||||    
T  43301796 tcaaaagatcatatttcccttaagtta-ggggtcaaaagaacatacttccctaaacatatggggtcactttt 43301726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 225
Target Start/End: Original strand, 22387141 - 22387288
Alignment:
Q  82 tttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggt--cataatcgcaattttttgagaagataaagagtcaaaagatc 176  Q
    |||| |||||||| || ||||||||||   |||||| ||| |||||||||||||||   ||||||| ||| | ||||   |||||| | ||||||| | |    
T  22387141 tttgacccctttcgtctcaaaattgctgagaagacgccacttgtcccaaaaaagggggccataatcacaactctttgtatagataaggggtcaaaaaa-c 22387239  T
Q  177 atatttcccttatgttatggggttaaaagagcatatttccctaaacatg 225  Q
    ||||||| | ||||||| ||||| ||||||||||||||| |||||||||    
T  22387240 atatttctcatatgttagggggtcaaaagagcatatttcactaaacatg 22387288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 32677866 - 32677816
Alignment:
Q  256 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||||||||||| | || ||||||||||||||||||    
T  32677866 gccaaaatcgcaacattttaaaacttaggaggcgaaaaatgcactttagcc 32677816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 36449836 - 36449778
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  36449836 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 36449778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 23048347 - 23048290
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||||||||| ||||||  |||||||  ||||||||| |||||||    
T  23048347 ttagggggccaaaatcgcaacttcttaaaatataaggggccaaaaatgcaatttagcc 23048290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 25884234 - 25884178
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||||||||||| |||| ||||  |||| |||||||    
T  25884234 tagggggccaaaatcgcaacattttaaaacttagggggcgaaatgtgcagtttagcc 25884178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 292
Target Start/End: Original strand, 5819761 - 5819800
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaa 292  Q
    |||||||||||||||||||||| |||||||||||| ||||    
T  5819761 ggggccaaaatcgcaactttttgaaacttaaggggggaaa 5819800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 15147906 - 15147835
Alignment:
Q  116 cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttccct 186  Q
    ||||||||||||||||||| | |||||||||| ||||||  ||||||| |  |||||||| |||||||||||    
T  15147906 cacgtgtcccaaaaaaggggctataatcgcaactttttgttaagataatggatcaaaagagcatatttccct 15147835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 25298857 - 25298798
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 309  Q
    |||| ||||||||||||||| ||||||||| || |||| ||||| ||||||||| |||||    
T  25298857 taggaggccaaaatcgcaacattttaaaacatagggggcgaaaagtgcactttaaccaat 25298798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 369
Target Start/End: Complemental strand, 28543227 - 28543164
Alignment:
Q  307 aataaagaaactttggaaggaaccaacttgtgttatacatttg-tgttgcaccatttgccacag 369  Q
    |||||||||||||||||||||| |||||||||  ||||||| | |||||| |||||||| ||||    
T  28543227 aataaagaaactttggaaggaatcaacttgtgccatacattagttgttgcgccatttgcaacag 28543164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 221
Target Start/End: Complemental strand, 1020559 - 1020478
Alignment:
Q  139 aatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaa 221  Q
    |||| ||| ||||||| ||||||||| | ||||| |||||||||| |||||||||  |||| |||| ||||||||||| ||||    
T  1020559 aatcacaactttttgaaaagataaagggacaaaa-atcatatttctcttatgttagagggtcaaaatagcatatttccataaa 1020478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 7899925 - 7899983
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| ||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  7899925 cttaggggaccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 9051076 - 9051026
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||| ||||||||| || | || ||||||||||||||||||||    
T  9051076 caaaatcgcaacattttaaaacataggaggcgaaaaatgcactttagccaa 9051026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 257 - 303
Target Start/End: Complemental strand, 12350072 - 12350026
Alignment:
Q  257 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||||||| |||| |||||||||||||||| |||||| |||||||||    
T  12350072 ccaaaatcacaacattttaaaacttaagggttgaaaagtgcacttta 12350026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 13830322 - 13830265
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||| ||||||||||||||||| |||||| ||||| ||||| ||||||||| ||||    
T  13830322 tagggggtcaaaatcgcaactttttcaaactt-aggggggaaaagtgcactttaaccaa 13830265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 304
Target Start/End: Complemental strand, 36464324 - 36464278
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 304  Q
    |||||||||||| ||||||||||||||||| ||||||| || |||||    
T  36464324 caaaatcgcaacattttaaaacttaaggggcgaaaaatacagtttag 36464278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 38840536 - 38840594
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||| ||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  38840536 cttagggggctaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 38840594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 2190782 - 2190835
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| ||||||||||||||||| ||||||  | |||||||||||| ||||    
T  2190782 ggggccaatatcgcaactttttaaaagttaaggtataaaaaatgcacttaagcc 2190835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 21773564 - 21773511
Alignment:
Q  10 aggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc 63  Q
    |||||||||| ||||||||  || |||||||||||||| |||||||||| ||||    
T  21773564 aggttaaactgcacttttcactccctaaattttaaaatgttgcgattttgactc 21773511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 261 - 298
Target Start/End: Complemental strand, 34257154 - 34257117
Alignment:
Q  261 aatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  34257154 aatcgcaactttttaaaagttaaggggttaaaaatgca 34257117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 306
Target Start/End: Complemental strand, 38839299 - 38839242
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||| ||||| |||| ||||| ||| ||||||||  |||||||||||||||||    
T  38839299 ttagggggctaaaattgcaagtttttgaaaattaagggggaaaaaatgcactttagcc 38839242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 1034514 - 1034570
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||  ||||| ||| |||||||| ||||| ||||||||||||    
T  1034514 tagggggccaaaattgcatgtttttgaaagttaaggggggaaaagtgcactttagcc 1034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 2986934 - 2986990
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||| |||| ||  | ||||||| ||||||||||||    
T  2986934 tagggggccaaaatcgcaacattttgaaacatagagagtgaaaagtgcactttagcc 2986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 15147852 - 15147816
Alignment:
Q  201 aaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||||||||||||||||||||||| ||||||||||||    
T  15147852 aaaagagcatatttccctaaacatgggggtcactttt 15147816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Complemental strand, 30793901 - 30793869
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaactta 282  Q
    ||||||||||||||||| |||||||||||||||    
T  30793901 tagggggccaaaatcgctactttttaaaactta 30793869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 215
Target Start/End: Complemental strand, 33199654 - 33199546
Alignment:
Q  109 aagacgacacgtgtcccaaaa-aagggtcataatcgcaat-tttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaaga 206  Q
    |||||| ||| ||||| |||| |||||||| ||||||||| ||||||  ||||||||  | ||||||| ||||||||||| | ||||   ||| ||||||    
T  33199654 aagacgtcacatgtcctaaaacaagggtcaaaatcgcaatatttttgtaaagataaaaggccaaaagagcatatttccctaaagttagaaggtcaaaaga 33199555  T
Q  207 gcatatttc 215  Q
    |||||||||    
T  33199554 gcatatttc 33199546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 14 - 306
Target Start/End: Complemental strand, 3208280 - 3207983
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaact--ctatttaaaaaatta-caattttggcccctttcttcccaaaattgct-- 108  Q
    |||||| |||||||||| | |||| ||||||||  ||||||||||| |   |||||||||||| || |||||||||| | |||| |||||||||| ||      
T  3208280 taaactgcacttttcgacccctaagttttaaaaagttgcgattttagcctcctatttaaaaaaataacaattttggctc-tttcgtcccaaaattactga 3208182  T
Q  109 -aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaaga 206  Q
     |||||| |||||||||||||||| ||||||||||||||| ||||| ||||||||| | ||||||| |||||||||||||||||||| ||||| ||||||    
T  3208181 gaagacgccacgtgtcccaaaaaatgggtcataatcgcaactttttaagaagataaggggtcaaaatatcatatttcccttatgtta-ggggtcaaaaga 3208083  T
Q  207 gcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 304  Q
     |||||||||||||||||   || |||||||| | |       | || | |||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  3208082 acatatttccctaaacatagaggttcacttttgtca-ctttttcata-gaggccaaaatcacaactttttaaaacttaagaggtgaaaaatgcactttag 3207985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 1824849 - 1824678
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaa 163  Q
    ||||||||  |||||||||||||||||| || |||||||| |   |||||| |||||||||||||| | || |||| |||||| |||||||||||||||     
T  1824849 ttaaaaaaagacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaaggccatactcgcaactttttgagaagataag 1824750  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     ||| |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1824749 aagttaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacatggggtcactttt 1824678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 1859294 - 1859123
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaa 163  Q
    ||||||||  |||||||||||||||||| || |||||||| |   |||||| |||||||||||||| | || |||| |||||| |||||||||||||||     
T  1859294 ttaaaaaaagacaattttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaacaaggccatactcgcaactttttgagaagataag 1859195  T
Q  164 gagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     ||| |||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  1859194 aagttaaaagatcatattttccttatgtta-ggggtcaaaagagcatatttccctaaacatggggtcactttt 1859123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 18252960 - 18253118
Alignment:
Q  82 tttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatca 177  Q
    ||||||||||||| |||||||||||||   |||||| |||||||||||||| || || ||||||| ||| ||||||||||||||| | ||||||| ||||    
T  18252960 tttggcccctttcgtcccaaaattgctgagaagacgccacgtgtcccaaaacagtggccataatcacaactttttgagaagataaggggtcaaaaaatca 18253059  T
Q  178 tatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttta 237  Q
    ||||||||||||||||| |||| |||| | ||||||||||||||||||||||||||||||    
T  18253060 tatttcccttatgttat-gggtcaaaaaaacatatttccctaaacatggggtcactttta 18253118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 308
Target Start/End: Original strand, 4423099 - 4423336
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    |||||||||| ||| ||| ||||||||||||| ||| ||   ||| |||   ||||||||||||||||||||||||||||| ||||||| | ||||||||    
T  4423099 acaattttggtccccttcgtcccaaaattgctgagaagatgccacatgttaaaaaaaagggtcataatcgcaattttttgaaaagataaggggtcaaaag 4423198  T
Q  174 atcatatttcccttatgttatgg-ggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaact 270  Q
    ||||||||||||||||||||||| |||||||||| ||||||||| |||||||  |||||||||| | | |       | ||| | ||||||||||||| |    
T  4423199 atcatatttcccttatgttatggaggttaaaagaacatatttccataaacatggggggtcacttctgtcatttttttcatagagagccaaaatcgcaaat 4423298  T
Q  271 ttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||| || ||||||| || |||| ||||||||||||||    
T  4423299 ttttgaagcttaaggagtaaaaattgcactttagccaa 4423336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 19391448 - 19391620
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  19391448 aaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagg 19391547  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  19391548 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 19391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 30784326 - 30784497
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||||  ||||||||||||| ||| ||| ||||||||| ||| ||   ||||||||||||||||||| ||||||||||| ||||||  ||||||| |     
T  30784326 aaaaaatggcaattttggccccattcatccaaaaattgctgagaagaagtcacgtgtcccaaaaaagggccataatcgcaactttttgtaaagataaggg 30784425  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  30784426 gtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatacggggtcactttt 30784497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 38630298 - 38630140
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| || ||||||||||   |||||| ||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  38630298 aaaaaatggcaattttggcccccttcatctcaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 38630199  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  38630198 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 38630140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 4518879 - 4519100
Alignment:
Q  21 cacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacga 115  Q
    |||||||||  | ||| |||||||||||||||||||||  | |  |||| |||||||  ||||||||||||||| | || |||||||| |   ||||||     
T  4518879 cacttttcgccccctatattttaaaatattgcgattttggccccctattaaaaaaatggcaattttggcccctt-catctcaaaattgttgagaagacgc 4518977  T
Q  116 cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    ||||||||||||||||||| | |||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| | | | ||||||||||||||    
T  4518978 cacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttaggagatcaaaagagcatattt 4519076  T
Q  215 ccctaaacat--ggggtcactttt 236  Q
    ||||||||||  ||||||||||||    
T  4519077 ccctaaacatagggggtcactttt 4519100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 7117175 - 7117346
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||||||| ||| |||| ||||   |||||| ||| |||||||||||| ||| |||||| |||| ||||||  ||||||| |    
T  7117175 aaaaaataacaattttggcccctttcgtcctaaaactgctgagaagacgccacatgtcccaaaaaaagggccataattgcaactttttgtaaagataagg 7117274  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     || |||||| || ||| ||||| |||||  |||| ||||||||||||||| ||||||||||||||||||||    
T  7117275 ggttaaaagaacacattccccttctgttagtgggtcaaaagagcatatttctctaaacatggggtcactttt 7117346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 78 - 224
Target Start/End: Original strand, 5192341 - 5192490
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||||||  ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  |||||||   |||||||     
T  5192341 caattttggccccttttatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataagaggtcaaaaa 5192440  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  5192441 a-catatttcccttatgttaagaggtcaaaagagcatatttccctaaacat 5192490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 19924508 - 19924336
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||||  |||||||||||||||  ||  |||||||||   |||||| ||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  19924508 aaaaaattgtaattttggccccttttatcaaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 19924409  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| | ||||| ||||||||||||||||  ||||||||||||    
T  19924408 ggtcaaaa-agcatatttcccttatgttaggaggtcagaagagtatatttccctaaacatagggggtcactttt 19924336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 33895616 - 33895459
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||||  ||||||||||||||||| ||| |||||| ||   |||||| ||||||||| ||||||||| |||||| |||| ||||||  ||||||| |     
T  33895616 aaaaaatagcaattttggcccctttcatccaaaaatttctgagaagacgccacgtgtccaaaaaaagggccataattgcaactttttgtaaagataaggg 33895517  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    || |||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  33895516 gttaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 33895459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 15869332 - 15869569
Alignment:
Q  6 aaaaaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaa--ctctatttaa-aaaattacaattttggcccc-tttcttcccaa 101  Q
    |||| ||||| ||| |||||||||  |||||||||||||||| ||||||||||    | ||||| || ||||| | |||||||||||| |||| | | ||    
T  15869332 aaaatggttagactgcacttttcgccctctaaattttaaaatgttgcgattttggtcccctattaaacaaaatgataattttggccccctttcattctaa 15869431  T
Q  102 aattgctaaga---cgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggg 197  Q
    ||||||| |||   || |||||||||||||| |||| |||||||||||| |||||||||||| | |  |||||||||||||||||| |||| |||| | |    
T  15869432 aattgctgagaagtcgccacgtgtcccaaaacaggggtcataatcgcaactttttgagaagacagatggtcaaaagatcatatttctctta-gtta-gag 15869529  T
Q  198 gttaaaagagcatatttccctaaacatggggtcactttta 237  Q
    || ||||||||||||||| ||||||||  |||||||||||    
T  15869530 gtcaaaagagcatatttctctaaacataaggtcactttta 15869569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 12723322 - 12723480
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| | | |||||||||   |||||| || |||||||||||||||| | |||||||||| ||||||  ||||||| |    
T  12723322 aaaaaatagcaattttggcccctttcatgcaaaaattgctgagaagacgccatgtgtcccaaaaaagggaccataatcgcaactttttgtaaagataacg 12723421  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||| ||||||||    
T  12723422 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttctctaaacat 12723480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 17648473 - 17648314
Alignment:
Q  82 tttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatca 177  Q
    ||||||||||||| ||| ||||||||| ||| ||   ||||||||| ||||| ||| | |||||||||| ||||||  ||||||| | ||||||| | ||    
T  17648473 tttggcccctttcatccaaaaattgctgagaagaggccacgtgtcctaaaaagggggccataatcgcaactttttgtaaagataaggggtcaaaa-agca 17648375  T
Q  178 tatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  17648374 tatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 17648314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 236
Target Start/End: Original strand, 18881558 - 18881734
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||| ||| ||||||||||| | ||| |||||   |||||||||| ||||| ||||||| |||| ||||||  |||    
T  18881558 ctattaaaaaaatggcaattttggcccccttcgtcccaaaattgttgagaagacaccaagtgtcccaaataaggggtcataattgcaactttttgtaaag 18881657  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||| | ||||||||| | ||||||||||||||||   | | |||| ||||||||||||||||||| |||||||||||    
T  18881658 ataaggggtcaaaagagcgtatttcccttatgttagaagctcaaaatagcatatttccctaaacat-gggtcactttt 18881734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 31268514 - 31268360
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgctaagacgacacg---tgtcccaaaaaaggg--tcataatcgcaattttttgagaagataaagagtcaaa 171  Q
    |||||||||||||||||| ||| ||||||||||||| ||| |    |||||||||||||||  |||||||| ||| |||||   ||||||||| ||| ||    
T  31268514 acaattttggcccctttcgtcctaaaattgctaagaagacgccgcatgtcccaaaaaaggggatcataatcacaactttttataaagataaagggtctaa 31268415  T
Q  172 agatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
    ||| |||||| ||||||||||||||||  ||||||||||||||||||||||| ||||    
T  31268414 agagcatatt-cccttatgttatggggc-aaaagagcatatttccctaaacacgggg 31268360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 227
Target Start/End: Original strand, 41688222 - 41688333
Alignment:
Q  117 acgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttc 215  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||| | ||||||| |||| ||||  ||||||||| ||||| |||||| ||||||||    
T  41688222 acgtgtcccaaaacatgggtcataatcgcaactttttgagaagataaggggtcaaaatatcagatttttcttatgttaaggggtcaaaagaacatatttc 41688321  T
Q  216 cctaaacatggg 227  Q
     |||||||||||    
T  41688322 tctaaacatggg 41688333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 221
Target Start/End: Original strand, 22452171 - 22452389
Alignment:
Q  9 aaggttaaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattac-aattttggcccctttcttcccaaaatt 105  Q
    ||||||||||| |||||||||  | ||| |||||||||| |||| |||||| | |  |||| |||||| |   ||||||||||| |||| ||||||||||    
T  22452171 aaggttaaactgcacttttcgccccctatattttaaaatgttgcaattttagccccctattaaaaaaaatggtaattttggcccatttcgtcccaaaatt 22452270  T
Q  106 gct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggtta 201  Q
    |||   |||||| |||||||||||||||| || | ||| |||||| ||||||  |||||||   ||||||| | |||||||||||||||||| | ||| |    
T  22452271 gctgagaagacgccacgtgtcccaaaaaaagggctatattcgcaactttttgtaaagataagaggtcaaaa-agcatatttcccttatgttaggaggtca 22452369  T
Q  202 aaagagcatatttccctaaa 221  Q
    ||||||||||||||||||||    
T  22452370 aaagagcatatttccctaaa 22452389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 44147213 - 44147043
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||| | ||  |||||||||||||   |||||| || || ||||||||||||| |||||||||||| ||||  | ||||||| |    
T  44147213 aaaaaatgacaattttggcctcctttatcccaaaattgctgagaagacgccatgtatcccaaaaaaggggtcataatcgcaacttttgta-aagataagg 44147115  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| |||| ||||||||||||||||||| ||||||||||||    
T  44147114 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaatagcatatttccctaaacataggggtcactttt 44147043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 8802461 - 8802618
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| ||| ||| ||||||||||| | |||||||||| ||||||  ||||||| |    
T  8802461 aaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccacatgttccaaaaaaggggccataatcgcaactttttgtaaagataagg 8802560  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | | |||||||||||||||| | ||| ||||||||||||||||||||||||    
T  8802561 ggtcaaaa-agc-tatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 8802618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 228
Target Start/End: Original strand, 21666335 - 21666497
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| || ||||||||||   |||||| || |||||||||||||||| | ||||| |||| ||| |   ||||||| |    
T  21666335 aaaaaatggcaattttggcccccttcgtctcaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataattgcaactttatctaaagataagg 21666434  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
     ||||||| | |||||||||||||||||| ||||| || |||||||||||||||||||||||||    
T  21666435 ggtcaaaaaa-catatttcccttatgttagggggtcaagagagcatatttccctaaacatgggg 21666497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 32400327 - 32400555
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgctaag 111  Q
    |||||| ||||| |||  |||||  ||||||||| |||||||||| | ||  |||| |||||||  ||| ||| |||| |||| | ||||||||||| ||    
T  32400327 taaactgcacttctcgccctctatgttttaaaatgttgcgattttgattccctattaaaaaaatggcaactttagccc-tttcataccaaaattgctgag 32400425  T
Q  112 acgacac---gtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    | |||||   |||| ||||||||||| ||||||| |||| ||||||  ||||||||  ||||||||  |||||||||||||||||| ||||| ||||| |    
T  32400426 aagacaccacgtgttccaaaaaaggggtcataattgcaactttttgtaaagataaatggtcaaaagg-catatttcccttatgttagggggtcaaaagcg 32400524  T
Q  208 catatttccctaaacat--ggggtcactttt 236  Q
    |||||||| ||||||||  ||||||||||||    
T  32400525 catatttcactaaacatagggggtcactttt 32400555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 4807661 - 4807834
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||| | |||| ||| |||||| ||   |||||| ||||||| ||||||||||| | |||||||||| ||||||  ||||||| |    
T  4807661 aaaaaatagcaattttggcacatttcatccaaaaattactgagaagacgccacgtgttccaaaaaaggggccataatcgcaactttttgtaaagataagg 4807760  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat---ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| |||||| ||||||||| |||||||   ||||||||||||    
T  4807761 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagaacatatttccttaaacatagaggggtcactttt 4807834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 21929974 - 21930035
Alignment:
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  21929974 catatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 21930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 36249608 - 36249551
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    |||| ||||||||| |||||||||| |||||||||||| ||||| |||||||||||||    
T  36249608 taggaggccaaaattgcaactttttgaaacttaaggggggaaaagtgcactttagcca 36249551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 176 - 306
Target Start/End: Complemental strand, 3380331 - 3380199
Alignment:
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaaatcgcaactttt 273  Q
    ||||||||||||||| ||  |||  |||||||||||||| |||||||||  ||||||||| || | |         ||||| |||||||||||||| |||    
T  3380331 catatttcccttatgctagagggacaaaagagcatatttacctaaacatggggggtcactattttcatttttttaatagggagccaaaatcgcaacattt 3380232  T
Q  274 taaaacttaaggggtgaaaaatgcactttagcc 306  Q
    | |||||||| |||||||||||||| |||||||    
T  3380231 tgaaacttaaagggtgaaaaatgcagtttagcc 3380199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 10007806 - 10007870
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaataaa 312  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| |||||||||||| |||||    
T  10007806 cttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcctataaa 10007870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Original strand, 19499432 - 19499480
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgc 297  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  19499432 ttagggggccaaaatcgcaactttttaaaagttacggggttaaaaatgc 19499480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 308
Target Start/End: Complemental strand, 3819541 - 3819487
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||||||| ||||| |||| |||||||||||| ||||||||||||||||||||    
T  3819541 ggggccaaaattgcaacattttgaaacttaagggg-gaaaaatgcactttagccaa 3819487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 41385601 - 41385700
Alignment:
Q  116 cacgtgtcccaaaaaagg-gtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    |||||||||||| | ||| | ||||||| ||| ||||||||| ||||| | ||||||| ||||||||||||||||||||  | || ||||||| ||||||    
T  41385601 cacgtgtcccaagacaggtgccataatcacaactttttgagatgataaggggtcaaaaaatcatatttcccttatgttagagagtcaaaagagtatattt 41385700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 21929908 - 21929972
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaa 130  Q
    |||||||| ||||||||||||| ||| |||||||||||||   |||||| |||||||||||||||    
T  21929908 aaaaaattgcaattttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaa 21929972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 309
Target Start/End: Complemental strand, 34602069 - 34602011
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 309  Q
    |||||||||||||||||||||||| |||| || |||||||||| |||| || |||||||    
T  34602069 agggggccaaaatcgcaactttttgaaacatagggggtgaaaagtgcatttaagccaat 34602011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 11282064 - 11282011
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||||||||||||| |||||||||||||| ||||||||  |||| |||||||||    
T  11282064 tagggggccaaaattgcaactttttaaaagttaagggggaaaaagtgcacttta 11282011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 182
Target Start/End: Original strand, 17857061 - 17857110
Alignment:
Q  133 ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatattt 182  Q
    |||||||||| ||| ||||||||||||||| | |||||||||||||||||    
T  17857061 ggtcataatcacaactttttgagaagataaggggtcaaaagatcatattt 17857110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 39910233 - 39910286
Alignment:
Q  167 tcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 220  Q
    ||||||||||||||||| || | ||||  |||||||||||||||||||||||||    
T  39910233 tcaaaagatcatatttcactaaagttagagggttaaaagagcatatttccctaa 39910286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 8802456 - 8802400
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||||||||| || |||  ||||| ||||||||||||    
T  8802456 tagggggccaaaatcgcaacattttaaaacatacgggacgaaaagtgcactttagcc 8802400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 21929903 - 21929847
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||| |||||||||||||| |||| |||| || |||| ||||||||||||||||||    
T  21929903 tagggagccaaaatcgcaacgttttgaaacatagggggcgaaaaatgcactttagcc 21929847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 38974849 - 38974793
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||    
T  38974849 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 38974793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 308
Target Start/End: Complemental strand, 39005947 - 39005891
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||    
T  39005947 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 39005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 298
Target Start/End: Complemental strand, 27453181 - 27453134
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    ||||||||||| |||||||||||| |||| || |||||||||||||||    
T  27453181 agggggccaaattcgcaactttttgaaacatagggggtgaaaaatgca 27453134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 29968380 - 29968434
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||||||||||||||| |||| ||||||||| |||||||| ||||| |||||||||    
T  29968380 cttagggggccaaaattgcaagtttttaaaagttaagggg-gaaaagtgcacttta 29968434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 30927676 - 30927727
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttag 304  Q
    ||||| |||||||||||||||| |||||||| ||| ||||||| ||||||||    
T  30927676 ggggctaaaatcgcaacttttttaaacttaaagggggaaaaatacactttag 30927727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 42982703 - 42982758
Alignment:
Q  251 agggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||  |||||||||||||||||| ||  ||||| ||||||||||||    
T  42982703 agggggccaaaattacaactttttaaaacttaaaggtggaaaagtgcactttagcc 42982758  T

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Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 287
Target Start/End: Complemental strand, 2373324 - 2373286
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaagggg 287  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  2373324 ttagggggccaaaatcacaactttttaaaagttaagggg 2373286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 5192578 - 5192528
Alignment:
Q  8 aaaggttaaactacacttttcgatctctaaattttaaaatattgcgatttt 58  Q
    |||||||||||| |||||||||  |||||| ||||||||| ||||||||||    
T  5192578 aaaggttaaacttcacttttcgccctctaagttttaaaatgttgcgatttt 5192528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 12351979 - 12351921
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||| |||||| |||| ||||| ||| |||||||| | ||||||||||||||||    
T  12351979 cttagggggtcaaaattgcaaatttttgaaagttaagggggggaaaatgcactttagcc 12351921  T

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Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Original strand, 12353403 - 12353460
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  12353403 cttagggggccaaaattgcaagtttttgaaagttaagggg-gaaaagtgcactttagcc 12353460  T

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Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 249 - 283
Target Start/End: Original strand, 16233714 - 16233748
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaa 283  Q
    |||||||||||||||||||||||||||||| ||||    
T  16233714 ttagggggccaaaatcgcaactttttaaaagttaa 16233748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 30335689 - 30335639
Alignment:
Q  256 gccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| |||| ||||||||| |||||||  ||||||||||||||||||    
T  30335689 gccaaaattgcaagtttttaaaagttaagggtggaaaaatgcactttagcc 30335639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Complemental strand, 32968510 - 32968456
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  32968510 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 32968456  T

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Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 38980091 - 38980145
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  38980091 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 38980145  T

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Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 306
Target Start/End: Original strand, 39011188 - 39011242
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||    
T  39011188 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagcc 39011242  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 309
Target Start/End: Complemental strand, 10006402 - 10006341
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaat 309  Q
    |||||||||||||||| |||| ||||| ||| |||  ||| ||||| |||||||||||||||    
T  10006402 cttagggggccaaaattgcaagtttttgaaagttagagggggaaaagtgcactttagccaat 10006341  T

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Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 14170479 - 14170430
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    ||||||||||||||||||||||| ||||||| || ||||| |||| ||||    
T  14170479 ttagggggccaaaatcgcaacttcttaaaacatagggggtcaaaactgca 14170430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 23565332 - 23565225
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtg-tcccaaaaaagggtcataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||||||| ||| |||||||||   |||||| ||| || |   ||||||||| ||||||||||| ||||||  ||||||| |    
T  23565332 aaaaaatgacaattttggcccctttcatccaaaaattgctgagaagacgccacatgtttaaaaaaaagggccataatcgcaactttttgtaaagataagg 23565233  T
Q  165 agtcaaaa 172  Q
     |||||||    
T  23565232 ggtcaaaa 23565225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 29435137 - 29435088
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    ||||||||  ||||||||||| ||||||||| |||| |||||||||||||    
T  29435137 ttagggggttaaaatcgcaacattttaaaacataagaggtgaaaaatgca 29435088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 4518925 - 4518869
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||  ||||||||  || |||| ||||| ||||||||||||    
T  4518925 tagggggccaaaatcgcaatattttaaaatatagggggcgaaaagtgcactttagcc 4518869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 7117361 - 7117417
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||| || ||||||||||||||||| ||||||||| ||||| || |||| |||||||    
T  7117361 taggtggtcaaaatcgcaactttttgaaacttaagtggtgataagtgcagtttagcc 7117417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 11283254 - 11283310
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| |||||  ||||||||| ||| |||||||| | ||||||||||||||||    
T  11283254 tagggggctaaaattacaactttttgaaagttaagggggggaaaatgcactttagcc 11283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 11456694 - 11456638
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||| ||||| ||| ||| |||| ||||| ||||||||||||    
T  11456694 tagggggccaaaattgcaaatttttgaaaattagggggagaaaagtgcactttagcc 11456638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 18881560 - 18881524
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggg 286  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  18881560 tagggggccaaaatcgcaacatttcaaaacttaaggg 18881524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 32973983 - 32974039
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||||| |||| ||| ||| ||||  |||| ||||||||||||||    
T  32973983 gggggccaaaatcgcaacgttttgaaagttaggggggaaaaagtgcactttagccaa 32974039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 44147218 - 44147274
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||  |||| |||| || |||| ||||| ||||||||||||    
T  44147218 tagggggccaaaatcgcaatattttgaaacatatggggcgaaaagtgcactttagcc 44147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 1e-41; HSPs: 58)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 63 - 306
Target Start/End: Original strand, 16415387 - 16415634
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgac-acgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagat 160  Q
    ||||||||||||| | |||||||| ||||||| ||||||||||||| ||| ||| || ||| | |||||| |||| |||||||||| ||||| |||||||    
T  16415387 ctatttaaaaaatgataattttggtccctttcgtcccaaaattgctgagaagacgacatgttctaaaaaatgggttataatcgcaacttttttagaagat 16415486  T
Q  161 aaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcacttttat-aannnnnnncttagggggcc 258  Q
    ||   ||||||| |||||||||||||||||||| | ||| ||||||  |||||||||||||||| |||||||||||| | ||       | || |||| |    
T  16415487 aagcggtcaaaatatcatatttcccttatgttaggcggtcaaaagaatatatttccctaaacataggggtcacttttgtaaaaaaaaatcataaggggtc 16415586  T
Q  259 aaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||    
T  16415587 aaaatcgcaactttttaaaatttaaggggtgaaaagtgcactttagcc 16415634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 22968217 - 22968387
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| ||   |||||||| || ||||||||||||||||||| ||||||  ||||||| |     
T  22968217 aaaaaataacaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtcataatcgcaactttttgtaaagataagg- 22968315  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  22968316 gtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 22968387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 23820176 - 23820006
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    ||||||| |||||||||||||||||| ||||||||||||| ||| ||   |||||||| || ||||||||||||||||||| ||||||  ||||||| |     
T  23820176 aaaaaataacaattttggcccctttcatcccaaaattgctcagaagatgtcacgtgtctcagaaaagggtcataatcgcaactttttgtaaagataagg- 23820078  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  23820077 gtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 23820006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 306
Target Start/End: Complemental strand, 26240200 - 26239957
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||| ||||||||||||||| |||| | |||||| |||    |||||| ||||||||| | ||||||| ||||||| |||| ||||| ||||||||| |    
T  26240200 aaaaatttacaattttggcccatttcgttccaaaactgccgagaagacgccacgtgtcctataaaaggggtcataattgcaacttttttagaagataagg 26240101  T
Q  165 agtcaaaagatcatatttcccttatgtt-atggggttaaaagagcatatttccctaaacat--ggggtcacttttataannnnnnncttagggggccaaa 261  Q
     ||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||||||  |||||||||||| | |       | ||| ||| ||||    
T  26240100 ggtcaaaagatcatatttcccttatgttaagggggtcaaaagagcatatttccgtaaacatgaggggtcacttttgtca-ttttttcatagcgggacaaa 26240002  T
Q  262 atcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||| |||||||||||||||||||||||||||| ||| ||||||||    
T  26240001 atcacaactttttaaaacttaaggggtgaaaagtgctctttagcc 26239957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 67 - 224
Target Start/End: Complemental strand, 3118924 - 3118764
Alignment:
Q  67 ttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataa 162  Q
    |||||||||||||||||||||||||||| ||||||||||| | ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  |||||||    
T  3118924 ttaaaaaattacaattttggcccctttcatcccaaaattgatcagaagatgtcacgtgtcccagaaaaggggtcataatcgcaaatttttgtaaagataa 3118825  T
Q  163 agagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
       ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  3118824 gaggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttccctaaacat 3118764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 236
Target Start/End: Complemental strand, 34834200 - 34833996
Alignment:
Q  39 ttttaaaatattgcgattttaact--ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagg 133  Q
    |||||||||||||||||||| ||   ||||| |||||||  ||||||||||||  ||| |||||||||||||   |||||| ||||||||||||||||||    
T  34834200 ttttaaaatattgcgattttgacctcctattaaaaaaatggcaattttggcccacttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaagg 34834101  T
Q  134 gtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtc 230  Q
    | | ||||| | || ||||||  ||||||| | ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||    
T  34834100 ggccataattgtaactttttgtaaagataacgggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtc 34834002  T
Q  231 actttt 236  Q
    ||||||    
T  34834001 actttt 34833996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 43 - 236
Target Start/End: Complemental strand, 31211063 - 31210865
Alignment:
Q  43 aaaatattgcgattttaa-ctctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaagggtc-a 137  Q
    |||||||||||||||| | | ||||| |||||||  ||||||||||||||||| ||||||||||||| ||| |||||   |||||||||||||||  | |    
T  31211063 aaaatattgcgattttgatccctatt-aaaaaatggcaattttggcccctttcatcccaaaattgctgagaagacaccacgtgtcccaaaaaaggtgcta 31210965  T
Q  138 taatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcacttt 235  Q
    ||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| | ||| |||||||||||||| |||||||||  |||||||||||    
T  31210964 taatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatattttcctaaacatagggggtcacttt 31210866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 136 - 236
Target Start/End: Original strand, 4013798 - 4013899
Alignment:
Q  136 cataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactt 234  Q
    |||||||||||  |||||||||||||| | |||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||||    
T  4013798 cataatcgcaacattttgagaagataaggggtcaaaagatcatatttcccttatattagggggtcaaaagagcatatttccctaaacatgggggtcactt 4013897  T
Q  235 tt 236  Q
    ||    
T  4013898 tt 4013899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 35102552 - 35102710
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| |||||||||||||   |||||| ||||||||||||||||||| | ||||| |||| ||||||  ||||||| |    
T  35102552 aaaaaatggcaattttggcccccttcatcccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataattgcaactttttgtaaagataagg 35102651  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  35102652 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 35102710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 18791600 - 18791428
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| ||||||||||| |   |||||| ||||||||| ||||||||| | |||||||||| ||||||  ||||| | |    
T  18791600 aaaaaatggcaattttggcccccttcatcccaaaattgttgagaagacgccacgtgtcctaaaaaaggggccataatcgcaactttttgtaaagatgagg 18791501  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||    
T  18791500 ggtcaaaa-agcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttt 18791428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 24603604 - 24603432
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||| ||||||||| ||| |||||||||||||   |||||| || |||||| ||||||||| | |||||||||| ||||||  ||||||| |    
T  24603604 aaaaaatgacaactttggcccccttcatcccaaaattgctgagaagacgccatgtgtccaaaaaaaggggccataatcgcaactttttgtaaagataagg 24603505  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  24603504 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 24603432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 25819927 - 25819756
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    ||||||||  |||||||||||||||  ||  |||||||||   |||||| ||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  25819927 aaaaaattgtaattttggccccttttatcaaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 25819828  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| | ||||| |||||||||||||||| ||||||||||||    
T  25819827 ggtcaaaa-agcatatttcccttatgttaggaggtcagaagagtatatttccctaaacataggggtcactttt 25819756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 24051251 - 24051079
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  |||||||||||| |||| ||||||||||| |   |||||| ||||||||||||||||| |||||||||||||| ||||||  || |||| |    
T  24051251 aaaaaatggcaattttggcccatttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggtcataatcgcaactttttgtaaatataagg 24051152  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     |||||||  | ||||||| ||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  24051151 ggtcaaaaagt-atatttctcttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 24051079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 34 - 220
Target Start/End: Complemental strand, 9241931 - 9241742
Alignment:
Q  34 ctaaattttaaaatattgcgattttaactctat-ttaaaaaattacaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaa 129  Q
    |||| ||||||||| |||||||||| || |  | ||||||||| | || |||| |||||||| | |||||||| || |||   || || |||||||||||    
T  9241931 ctaagttttaaaatgttgcgattttgaccccttattaaaaaatgataaatttgacccctttcattccaaaattactgagaaggcgccatgtgtcccaaaa 9241832  T
Q  130 aag-ggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 220  Q
     || || ||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||||| |||||||||||||    
T  9241831 cagagggcataatcgcaactttttgagaagataaggggtcaaaagatcatatttcccttatgtta--gggtcaaaagaacatatttccctaa 9241742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 12291478 - 12291618
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagg-gtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||| || |||| || |||||||| |   |||||| || ||||||||||| ||  ||||||||||||| |||||||||||||||||    
T  12291478 aaaaaatggcaattttggtccatttcgtcacaaaattgttgagaagacgccatgtgtcccaaaacagatgtcataatcgcaactttttgagaagataaag 12291577  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaag 205  Q
     |||||||||||||||||||||||||||| ||||| |||||    
T  12291578 ggtcaaaagatcatatttcccttatgttagggggtcaaaag 12291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 14572239 - 14572410
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| ||||||||| ||| ||   ||| |||||||||||| ||| ||||||||||| |||||   ||||||| |    
T  14572239 aaaaaatagcaattttggcccctttcatccaaaaattgctgagaagatgccacatgtcccaaaaaaagggccataatcgcaactttttataaagataagg 14572338  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| |  || |||||||||||||||||||||||| ||||||||||||    
T  14572339 ggtcaaaa-agcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacataggggtcactttt 14572410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 69 - 224
Target Start/End: Original strand, 4597466 - 4597624
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||||||||| |||  ||||||||| ||   |||||| ||| ||||||||||||||| | ||||| |||| ||||||  ||||||| |    
T  4597466 aaaaaatgacaattttggcccccttcaacccaaaattactgaaaagacgccacatgtcccaaaaaaggggccataattgcaactttttgtaaagataagg 4597565  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  4597566 ggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 4597624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 116 - 224
Target Start/End: Complemental strand, 8412951 - 8412843
Alignment:
Q  116 cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    ||||||||||||||||||| |||||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| ||||| ||||||||||||||    
T  8412951 cacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatattt 8412853  T
Q  215 ccctaaacat 224  Q
    | ||||||||    
T  8412852 ctctaaacat 8412843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 34528397 - 34528258
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacgaca---cgtgtcccaaaaaagg-gtcataatcgcaattttttgagaag 158  Q
    ||||| ||||||| |||||||||||||||||| ||||||||||||| ||| ||||   | |||||||||| ||  | ||||||||||| |||||||||||    
T  34528397 ctattaaaaaaatgacaattttggcccctttcgtcccaaaattgctgagaagacatcacatgtcccaaaacagtcgccataatcgcaactttttgagaag 34528298  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatgggg 198  Q
    |||| | ||||||||||||||||||  |||||||| ||||    
T  34528297 ataaggggtcaaaagatcatatttcatttatgttaggggg 34528258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 32451961 - 32451797
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaagagtcaaaa 172  Q
    |||||||||||||||||| ||| ||||||| |   |||||| ||| |||| |||||||||| |||||||||||| ||||||  ||||||| | |||||||    
T  32451961 acaattttggcccctttcatccaaaaattgttgagaagacgccacatgtctcaaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaa 32451862  T
Q  173 gatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     | |||||||||||||||||| | ||| |||||||||||||||  |||||||  ||||||||||||    
T  32451861 -agcatatttcccttatgttaggaggtcaaaagagcatatttctataaacatagggggtcactttt 32451797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 77 - 228
Target Start/End: Complemental strand, 12427468 - 12427312
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaa-gggtcataatcgcaa-ttttttgagaagataaagagtcaaa 171  Q
    |||||||||||| ||||| || |||||||||| ||| ||   ||||||||||||| || |||||| |||||||| |||||||  ||||||||| || |||    
T  12427468 acaattttggcctctttcgtcgcaaaattgctgagaagatggcacgtgtcccaaagaatgggtcaaaatcgcaacttttttgtaaagataaagggtaaaa 12427369  T
Q  172 agatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatgggg 228  Q
    | | ||||||||| ||||||||  || | ||||||||||||||||||||||||||||    
T  12427368 aaaacatatttcctttatgttaatggttcaaaagagcatatttccctaaacatgggg 12427312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 15298727 - 15298556
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||||  |||||||||| || ||  || ||||||||||   |||||| ||| ||||||||||||||  ||||||||||| ||||||  ||||||| |     
T  15298727 aaaaaatggcaattttggctccctttatctcaaaattgctgagaagacgccacttgtcccaaaaaaggaccataatcgcaactttttgtaaagataaggg 15298628  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     |||||| | ||||||| |||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  15298627 atcaaaaaa-catattttccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 15298556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 22269636 - 22269479
Alignment:
Q  82 tttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaagagtcaaaagatca 177  Q
    ||||||||||||| || |||||||| |   |||||| |||||||||||||||| ||| ||||| | ||| ||||||  ||||||| | ||||||| | ||    
T  22269636 tttggcccctttcgtctcaaaattgttgagaagacgccacgtgtcccaaaaaaggggccataaacacaactttttgtaaagataaggggtcaaaa-aaca 22269538  T
Q  178 tatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    ||||||||||||||||  |||| |||||| ||||||||||||||||| ||||||||||||    
T  22269537 tatttcccttatgtta-agggtcaaaagaacatatttccctaaacataggggtcactttt 22269479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 116 - 224
Target Start/End: Original strand, 26710418 - 26710526
Alignment:
Q  116 cacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatattt 214  Q
    ||||||||||||||||||| | |||||||||| ||||||  ||||||| | ||||||| | ||||||| |||||||||| | ||| ||||||||||||||    
T  26710418 cacgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaaaa-catattttccttatgttaggaggtcaaaagagcatattt 26710516  T
Q  215 ccctaaacat 224  Q
    ||||||||||    
T  26710517 ccctaaacat 26710526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 39 - 236
Target Start/End: Original strand, 24615723 - 24615924
Alignment:
Q  39 ttttaaaatattgcgattttaac--tctatttaaaaaattacaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaa--a 131  Q
    ||||||||| ||| |||||| ||  |||||| ||||||| | |||||||||| ||||| ||| ||||||||| |||   || ||| |||||||||||  |    
T  24615723 ttttaaaatgttgagattttgaccctctattaaaaaaatga-aattttggcctctttcgtccaaaaattgctgagaaaacgccacatgtcccaaaaataa 24615821  T
Q  132 gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtca 231  Q
    ||||||||||||||| |||| |  |||| || | ||||||| | |||||||| | ||||||| ||||| |||||||||||||||||||| | ||||||||    
T  24615822 gggtcataatcgcaacttttagtaaagagaatgggtcaaaa-agcatatttctcatatgtta-ggggtcaaaagagcatatttccctaatcgtggggtca 24615919  T
Q  232 ctttt 236  Q
    |||||    
T  24615920 ctttt 24615924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 4371127 - 4370969
Alignment:
Q  77 acaattttggcccctttcttcccaaaattgctaaga---cgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    |||||||||||||||||| || |||||||||| |||   || ||  ||||||||||||     | | |||||| ||||||  ||||||| | |||||| |    
T  4371127 acaattttggcccctttcatctcaaaattgctgagaaaacgccatatgtcccaaaaaa-----aaagtcgcaactttttgtaaagataaggggtcaaagg 4371033  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcactttt 236  Q
    | |||||||||||||||||| ||||| |||||||||||||||||||||||||  |||||||||||    
T  4371032 agcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacatggagggtcactttt 4370969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 63 - 218
Target Start/End: Original strand, 18749151 - 18749309
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggt-cataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||||||| | | ||||||| ||||| ||   ||| |||||||||||||||  ||||||| ||| ||||||  |||    
T  18749151 ctattaaaaaaatagcaattttggcccctttcatacaaaaattgataagaagaagccacatgtcccaaaaaaggggacataatcacaactttttgtaaag 18749250  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccct 218  Q
    |||| | ||||||| | |||||||||||||||||||| ||| ||| || |||||||||||    
T  18749251 ataaggggtcaaaa-agcatatttcccttatgttatgaggtcaaatgaacatatttccct 18749309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 166 - 236
Target Start/End: Original strand, 18749289 - 18749361
Alignment:
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    |||||| || |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  18749289 gtcaaatgaacatatttcccttatgttaagaggtcaaaagagcatatttccctaaacatagggggtcactttt 18749361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 236
Target Start/End: Original strand, 32682449 - 32682510
Alignment:
Q  176 catatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    ||||||||| |||||||||| ||| |||||||||||||||||||||||| ||||||||||||    
T  32682449 catatttcctttatgttatgaggtcaaaagagcatatttccctaaacataggggtcactttt 32682510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 19282331 - 19282444
Alignment:
Q  124 ccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca 223  Q
    ||||||| ||||||||||||||| ||||||| ||||||| | |||||||   |||||||||||||||||| | | | |||| ||||||||| | ||||||    
T  19282331 ccaaaaaggggtcataatcgcaactttttgaaaagataaggggtcaaaa-tgcatatttcccttatgttaggagttcaaaatagcatatttacttaaaca 19282429  T
Q  224 t--ggggtcactttt 236  Q
    |  ||||||||||||    
T  19282430 taaggggtcactttt 19282444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 2058991 - 2059055
Alignment:
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg--gggtcactttt 236  Q
    |||||||||||||||||||| || || |||| ||||||||||||||||||||  |||||||||||    
T  2058991 atcatatttcccttatgttagggtgtcaaaatagcatatttccctaaacatgaagggtcactttt 2059055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 8149061 - 8149140
Alignment:
Q  156 aagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||||| |||||||||||||||||||||| |||||||  |||| ||||||  |||||||| |||| || |||||||||||    
T  8149061 aagataaggagtcaaaagatcatatttcccctatgttaaagggtcaaaagattatatttccttaaatat-gggtcactttt 8149140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 27437884 - 27437828
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  27437884 tagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 27437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 27447962 - 27448014
Alignment:
Q  254 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  27447962 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 27448014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 20863784 - 20863734
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcac 299  Q
    |||||||||||||| ||||||||||||||| |||||| || ||||||||||    
T  20863784 ttagggggccaaaaccgcaactttttaaaagttaaggtgtcaaaaatgcac 20863734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 306
Target Start/End: Original strand, 23124879 - 23124990
Alignment:
Q  195 ggggttaaaagagcatatttccctaaacatggggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaa 294  Q
    ||||| |||||||||||||| |||||||||||||||||| || | |         |||||| ||||||||||||| |||||||| ||| | ||||||||     
T  23124879 ggggtcaaaagagcatattttcctaaacatggggtcactattttcatttttataataggggaccaaaatcgcaacattttaaaatttaggaggtgaaaag 23124978  T
Q  295 tgcactttagcc 306  Q
    |||| |||||||    
T  23124979 tgcaatttagcc 23124990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 306
Target Start/End: Original strand, 7316338 - 7316395
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||| |||| ||||| ||| |||||||| ||||| ||||||||||||    
T  7316338 ttagggggccaaaattgcaagtttttgaaagttaaggggggaaaagtgcactttagcc 7316395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 22968404 - 22968457
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||| |||| |||||||||||| ||||| || |||||||||    
T  22968404 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 22968457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 23819989 - 23819936
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||||||||| |||| |||||||||||| ||||| || |||||||||    
T  23819989 ggggccaaaatcgcaacattttgaaacttaaggggcgaaaagtgaactttagcc 23819936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 303
Target Start/End: Complemental strand, 5658795 - 5658759
Alignment:
Q  267 aactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5658795 aactttttaaaacttaaggggggaaaaatgcacttta 5658759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 6842328 - 6842384
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||||||||| |||||||  ||| ||||| ||||||||||||    
T  6842328 tagggggccaaaattgcaactttttgaaacttagagggggaaaagtgcactttagcc 6842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 301
Target Start/End: Original strand, 14195805 - 14195857
Alignment:
Q  249 ttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    |||||||||| ||||||||||||||||||| |||| | || ||||||||||||    
T  14195805 ttagggggccgaaatcgcaactttttaaaagttaatgtgtcaaaaatgcactt 14195857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 18749153 - 18749097
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| ||||| ||||||||| ||||||| ||||| |||| |||||||    
T  18749153 tagggggccaaaattgcaacattttaaaacataaggggcgaaaagtgcagtttagcc 18749097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 301
Target Start/End: Complemental strand, 29473126 - 29473082
Alignment:
Q  257 ccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactt 301  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||    
T  29473126 ccaaaattgcaactttttaaaacttaaggggggaaaagtgcactt 29473082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 254 - 298
Target Start/End: Complemental strand, 31329890 - 31329846
Alignment:
Q  254 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgca 298  Q
    |||||||||||||||||||||||||| || |||||||||| ||||    
T  31329890 gggccaaaatcgcaactttttaaaacatatggggtgaaaagtgca 31329846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 259 - 306
Target Start/End: Original strand, 3333581 - 3333628
Alignment:
Q  259 aaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||||||| |||  |||||||||||||||||    
T  3333581 aaaatcgcaactttttcaaacttaaagggataaaaatgcactttagcc 3333628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 19176570 - 19176499
Alignment:
Q  116 cacgtgtcccaaaaaagggtcataatcgcaa-ttttttgagaagataaagagtcaaaagatcatatttccct 186  Q
    ||||||||||||||| |||||||| |||||| |||||||  ||||||| | ||||||| | |||||||||||    
T  19176570 cacgtgtcccaaaaatgggtcatagtcgcaacttttttgtaaagataatgtgtcaaaatagcatatttccct 19176499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 78 - 179
Target Start/End: Original strand, 20863798 - 20863903
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    |||||| ||||| |||| | |||||||||||   |||||| || |||||||||||||||| | |||||||||| ||||||  ||||||| | ||||||||    
T  20863798 caatttcggcccttttcgttccaaaattgctgagaagacgccatgtgtcccaaaaaaggggccataatcgcaactttttgtaaagataaggggtcaaaag 20863897  T
Q  174 atcata 179  Q
    | ||||    
T  20863898 agcata 20863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 253 - 287
Target Start/End: Complemental strand, 6840245 - 6840211
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaagggg 287  Q
    |||||||||||||||||||||| ||||||||||||    
T  6840245 ggggccaaaatcgcaactttttgaaacttaagggg 6840211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 14822418 - 14822360
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||| ||||||||||| |||| ||||| ||| |||||||||||||| |||||| |||||    
T  14822418 cttatggggccaaaattgcaagtttttgaaaattaaggggtgaaaagtgcactctagcc 14822360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 182
Target Start/End: Original strand, 23124824 - 23124898
Alignment:
Q  109 aagacgacacgtgtcc-caaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatattt 182  Q
    |||||| ||| ||||| |||||| ||||||||||||||| ||||||  ||||||| | ||||||||| |||||||    
T  23124824 aagacgccacatgtcctcaaaaaggggtcataatcgcaactttttgtaaagataaggggtcaaaagagcatattt 23124898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 14195732 - 14195631
Alignment:
Q  136 cataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggt-taaaagagcatatttccctaaacatggggtcactt 234  Q
    ||||||||||| ||||||  || |||| | |  |||||| ||||||||||| ||||||  | ||  |||||| ||||||||||| |||||||||||||||    
T  14195732 cataatcgcaactttttgtaaaaataaggggctaaaagaccatatttccctcatgttagagagtcaaaaagaacatatttcccttaacatggggtcactt 14195633  T
Q  235 tt 236  Q
    ||    
T  14195632 tt 14195631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 18791605 - 18791662
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaagggg-tgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||||||||| || ||||  ||||| ||||||||||||    
T  18791605 tagggggccaaaatcgcaacattttaaaacatagggggacgaaaagtgcactttagcc 18791662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 2059068 - 2059124
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||| |||||||||||| |||||||| ||| || | |||||||||| |||||||    
T  2059068 tagggggtcaaaatcgcaacattttaaaatttagggagcgaaaaatgcaatttagcc 2059124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 3333071 - 3333103
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaactta 282  Q
    ||||||||||||||||||||||||| |||||||    
T  3333071 tagggggccaaaatcgcaactttttcaaactta 3333103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 8412814 - 8412758
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||| |||||||||||||| |||| |||||||||||| | ||| || |||||||||    
T  8412814 tagggagccaaaatcgcaacattttgaaacttaaggggcggaaagtggactttagcc 8412758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Original strand, 34834180 - 34834228
Alignment:
Q  258 caaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||  ||||||||| ||||||| ||||| ||||||||||||    
T  34834180 caaaatcgcaatattttaaaacataaggggcgaaaagtgcactttagcc 34834228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 35102547 - 35102491
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||| ||||||||||| |||| |||| || |||| ||||| ||||||||||||    
T  35102547 tagggggctaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagcc 35102491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 69 - 306
Target Start/End: Complemental strand, 10164 - 9923
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtca-taatcgcaattttttgagaagataaag 164  Q
    |||||| ||||||||||| ||||||| ||||||||||| |   |||||| ||| |||| ||||||||||  | ||||||||| ||||||||||||||| |    
T  10164 aaaaaaatacaattttggtccctttcgtcccaaaattgttgagaagacgccacatgtcacaaaaaaggggaaataatcgcaactttttgagaagataagg 10065  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatg-gggtcacttttat-aannnnnnncttagggggccaaaa 262  Q
     ||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| ||||||||||| | |        | || ||||||||||    
T  10064 ggtctaaagatcatattttccttatgttat-gggtcaaaagagcatatttccctaaacatgagggtcacttttgtcattttttttcata-ggggccaaaa 9967  T
Q  263 tcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    || ||||| ||||||||||||||||| |||||||||||||||||    
T  9966 tcacaactatttaaaacttaaggggtaaaaaatgcactttagcc 9923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 14 - 293
Target Start/End: Complemental strand, 112427 - 112140
Alignment:
Q  14 taaactacacttttcgatctctaaattttaaaatattgcgattttaactc--tatttaaaaaattacaattttggcccctttcttcccaaaattgct--- 108  Q
    ||||||||||||||||  | | || ||||||||| |||| |||||  |||  |||| ||||||||||||||||||||  |||| ||| ||||||||        
T  112427 taaactacacttttcgtccccaaagttttaaaatgttgcaattttggctccttattaaaaaaattacaattttggcctttttcgtcctaaaattgcagag 112328  T
Q  109 aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| ||| |||||||||||| || | |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||||  |    
T  112327 aagacgccacatgtcccaaaaaatggaccataaccgcaactttttgagaagataaggagtcaaaagatcatatttcccttatgttaggaggtcaaaaagg 112228  T
Q  208 catatttccctaaacatgg--ggtcacttttataannnnnnncttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    ||||||||||||||  |||  || ||||||| |||         |||||| |||||||||||||||||||||||||| | ||||||||    
T  112227 catatttccctaaatctgggaggacacttttgtaattttttttataggggaccaaaatcgcaactttttaaaacttatgaggtgaaaa 112140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 77; Significance: 1e-35; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 49908 - 49732
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  |||    
T  49908 ctatttaaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaag 49809  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactt 234  Q
    |||| | ||||||| | |||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||    
T  49808 ataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 49732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 234
Target Start/End: Complemental strand, 62447 - 62271
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaag 158  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||| ||| ||   ||||||||||| ||||||| |||||||||||| ||||||  |||    
T  62447 ctatttaaaaaatagcaattttggcccctttcatcccaaaattgctcagaagatgccacgtgtcccagaaaaggggtcataatcgcaactttttgtaaag 62348  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactt 234  Q
    |||| | ||||||| | |||||||||||||||||| ||||| ||||||||||||||||| ||||||  ||||||||||    
T  62347 ataaggggtcaaaaaa-catatttcccttatgttagggggtcaaaagagcatatttcccgaaacatagggggtcactt 62271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 49715 - 49659
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  49715 taggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 49659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 62254 - 62198
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| || |||||||||    
T  62254 taggggtccaaaatcgcaacattttaaaacttaaggggcgaaaagtggactttagcc 62198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 5711 - 5882
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtcataatcgcaattttttgagaagataaaga 165  Q
    |||||||  ||||||||| ||||||  |||||||||||||   |||||| ||||||||||||||||||| ||||||||||| ||||||  ||||||| |     
T  5711 aaaaaatggcaattttggtcccttttatcccaaaattgctgcgaagacgccacgtgtcccaaaaaagggccataatcgcaactttttgtaaagataaggg 5810  T
Q  166 gtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
    ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  5811 gtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 5882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 73; Significance: 3e-33; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 2110 - 2282
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| |||||||||||| ||||||  ||||||| |    
T  2110 aaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggtcataatcgcaactttttgtaaagataagg 2209  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     ||||||| | |||||| ||||||||||| | ||| ||||||||||||||||||||||||  ||||||||||||    
T  2210 ggtcaaaa-agcatattgcccttatgttaggaggtcaaaagagcatatttccctaaacatagggggtcactttt 2282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 2104 - 2048
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| ||||| ||||||||| || |||| ||||| |||| |||||||    
T  2104 tagggggccaaaattgcaacattttaaaacatagggggcgaaaagtgcagtttagcc 2048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 78 - 236
Target Start/End: Complemental strand, 29950 - 29789
Alignment:
Q  78 caattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaagataaagagtcaaaag 173  Q
    ||||||||||||||||| |||||||||||||   |||||| |||  || |||||  || || |||||| |||| ||||||||||||||| | ||||||||    
T  29950 caattttggcccctttcgtcccaaaattgctgagaagacgccacaggttccaaatcagaggccataattgcaactttttgagaagataaggggtcaaaag 29851  T
Q  174 atcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    |||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||    
T  29850 atcatatttcccttatgtta-ggggtccaaagagcatatttccccaaacatggggtcactttt 29789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 19531 - 19355
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaag 158  Q
    ||||| |||||||  |||||||||||| |||| ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  |||    
T  19531 ctattaaaaaaatggcaattttggcccatttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcgcaactttttgtaaag 19432  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
    |||| | ||||||| | |||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  19431 ataaggggtcaaaa-agcatatttcccttatgtta-ggggtcaaaagagcatatttccctaaacataggggtcactttt 19355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 62059 - 61885
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa---gggtcataatcgcaattttttgagaagataa 162  Q
    |||||||  ||||||||||||||||| ||| ||||||| |   |||||| ||||||||||||||||   ||| |||||| |||| ||||||  |||||||    
T  62059 aaaaaatagcaattttggcccctttcatccaaaaattgttgagaagacgccacgtgtcccaaaaaaaaggggccataattgcaactttttgtaaagataa 61960  T
Q  163 agagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttt 236  Q
     | ||||||| | |||||||||||||||||| |  || ||||||||||||||||||||||||  ||||||||||||    
T  61959 ggggtcaaaa-agcatatttcccttatgttaggatgtcaaaagagcatatttccctaaacatagggggtcactttt 61885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 19529 - 19585
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||  ||| |||||||||||| |||||||||| |||||||    
T  19529 tagggggccaaaatcgaaacagtttgaaacttaaggggcgaaaaatgcagtttagcc 19585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 62069 - 62122
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    ||||||||||| ||||| |||| |||| || ||||||||||||||| |||||||    
T  62069 ggggccaaaattgcaacattttgaaacatagggggtgaaaaatgcagtttagcc 62122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 3629 - 3799
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgctaagacgacac---gtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    ||||||| |||||||  ||  ||||| ||||||||||||| ||| |||||   |||||||||||||||| | ||||||| || ||||||  ||||||| |    
T  3629 aaaaaatgacaatttcagcatctttcatcccaaaattgctgagaagacacctcgtgtcccaaaaaaggggctataatcgaaactttttgtaaagataagg 3728  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  3729 ggtcaaaa-agcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatggggtcactttt 3799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 142008 - 142179
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||  |||||||||   |||||| |||||||||||||||| ||| ||||||||||| ||||||  |||||||      
T  142008 aaaaaatagcaattttggcccctttcatctaaaaattgcttagaagacgccacgtgtcccaaaaaatgggccataatcgcaactttttgtaaagataaga 142107  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat-ggggtcactttt 236  Q
     ||||||| | |||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||||||    
T  142108 ggtcaaaa-agcatatttcccttatgttaggaggtcaaaagagcatatttccctaaacataggggtcactttt 142179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 69 - 237
Target Start/End: Original strand, 25025 - 25198
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| | |||||||||||   |||||| ||||||||||||||||||| | |||||| ||| ||||    ||||||| |    
T  25025 aaaaaatggcaattttggcccctttcataccaaaattgctgagaagacgccacgtgtcccaaaaaaggggccataatcacaacttttgttaaagataagg 25124  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggtcactttta 237  Q
     ||||||| | |||||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||||||||    
T  25125 ggtcaaaa-agcatatttcccttatgttagggggtcaaaagagcatatttccctaaacatagggggtcactttta 25198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 69 - 177
Target Start/End: Complemental strand, 9276 - 9163
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa--gggtcataatcgcaattttttgagaagataaa 163  Q
    |||||||||||||||||||||||||| |||||||||||||   |||||| ||||||||||||||||  ||||||||||||||| ||||||| |||||||     
T  9276 aaaaaattacaattttggcccctttcgtcccaaaattgcttagaagacgtcacgtgtcccaaaaaagggggtcataatcgcaactttttgaaaagataat 9177  T
Q  164 gagtcaaaagatca 177  Q
    | ||||||||||||    
T  9176 gggtcaaaagatca 9163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 253 - 293
Target Start/End: Complemental strand, 9141 - 9101
Alignment:
Q  253 ggggccaaaatcgcaactttttaaaacttaaggggtgaaaa 293  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  9141 ggggtcaaaatcgcaactttttaaaacttaagaggtgaaaa 9101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 64; Significance: 7e-28; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 6080 - 5916
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgctaagacga---cacgtgtcccaaaaaagggtcataatcgcaattttttgagaaga 159  Q
    ||||| |||||||  ||||||||||||| ||| ||||||||||||| ||| ||   |||||||||||||||| |||||||||||||| |||||   ||||    
T  6080 ctattaaaaaaatggcaattttggcccccttcatcccaaaattgctgagaagatgccacgtgtcccaaaaaaaggtcataatcgcaactttttataaaga 5981  T
Q  160 taaagagtcaaaagatcatatttcccttatgtta-tggggttaaaagagcatatttccctaaacat 224  Q
    ||| | ||||||| | ||||||||||||||||||  ||||| |||| |||||||||||||||||||    
T  5980 taaggggtcaaaa-agcatatttcccttatgttaggggggtcaaaatagcatatttccctaaacat 5916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 6078 - 6134
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| ||| ||||| || |||| ||||| | ||||||||||    
T  6078 tagggggccaaaatcgcaacatttaaaaacatagggggcgaaaagtacactttagcc 6134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 2242 - 2080
Alignment:
Q  61 ctctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgaga 156  Q
    ||||||| |||||||  ||||||||||||||||| ||| |||||||||   |||||| ||||||||||||||||||| | |||||||||| ||||||  |    
T  2242 ctctattaaaaaaatagcaattttggcccctttcatccaaaaattgctgagaagacgccacgtgtcccaaaaaaggggctataatcgcaactttttgtaa 2143  T
Q  157 agataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaa 220  Q
    |||||  | ||||||| | ||| |||||||||||||| | ||| ||||||||||||||||||||    
T  2142 agatatggggtcaaaa-agcatgtttcccttatgttaggaggtcaaaagagcatatttccctaa 2080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 43928 - 44055
Alignment:
Q  109 aagacgacacgtgtcccaaaaaagggtc-ataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagag 207  Q
    |||||| |||||||||||||| |||| | ||| |||||| ||||||||||||||||  ||||||||||||||||||||||  |||| ||||| |||| ||    
T  43928 aagacgccacgtgtcccaaaacagggaccatagtcgcaactttttgagaagataaaaggtcaaaagatcatatttccctttcgtta-ggggtcaaaaaag 44026  T
Q  208 catatttccctaaacatggggtcactttt 236  Q
    ||||||| ||||||||||||| |||||||    
T  44027 catattttcctaaacatgggggcactttt 44055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 63 - 224
Target Start/End: Original strand, 3015 - 3179
Alignment:
Q  63 ctatttaaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaag-ggtcataatcgcaattttttgagaag 158  Q
    ||||| |||||||  ||||||||||||| ||| ||||||||||| |   |||||| ||||||||||||||||| || |||||| |||| ||||||  |||    
T  3015 ctattaaaaaaatggcaattttggcccccttcatcccaaaattgatgagaagacgccacgtgtcccaaaaaagaggccataattgcaactttttgtaaag 3114  T
Q  159 ataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
    ||||   ||||||| | |||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  3115 ataagaggtcaaaaaa-catatttcccttatgttaggaggtcaaaagagcatatttccctaaacat 3179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 3017 - 2959
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||||||| |||| |||| || |||| ||||| ||||||||||||||    
T  3017 tagggggccaaaatcgcaacattttgaaacatagggggcgaaaagtgcactttagccaa 2959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 69 - 224
Target Start/End: Complemental strand, 66417 - 66259
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||||||| ||| |||||| ||   |||||| ||||||| | ||||||||| |||||||||||| ||||||  ||||||| |    
T  66417 aaaaaatagcaattttggcccctttcatccaaaaatttctgagaagacgccacgtgttcaaaaaaaggggtcataatcgcaactttttgtaaagataagg 66318  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat 224  Q
     ||||||| | |||| ||||||||||||| | ||| |||| |||||||||||||||||||    
T  66317 ggtcaaaa-agcatagttcccttatgttaggaggtcaaaatagcatatttccctaaacat 66259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1202 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 1902 - 2007
Alignment:
Q  132 gggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaacat--ggggt 229  Q
    ||||||||||||||| ||||||  ||||||| | ||||||| | |||||||||||||||||| ||||| |||| |||||||||||||||||||  |||||    
T  1902 gggtcataatcgcaactttttgtaaagataaggggtcaaaa-agcatatttcccttatgttagggggtcaaaatagcatatttccctaaacatagggggt 2000  T
Q  230 cactttt 236  Q
    |||||||    
T  2001 cactttt 2007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 817 - 989
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg-tcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| ||||||||||| |   |||||| ||  ||||||||| ||||| ||||||| |||| ||||||  ||||||| |    
T  817 aaaaaatggcaattttggcccccttcgtcccaaaattgttgagaagacgccagatgtcccaaataaggggtcataattgcaactttttgtaaagataagg 916  T
Q  165 agtcaaaagatcatatttcccttatgttatggggttaaaagagcatatttccctaaaca-tggggtcactttt 236  Q
     ||||||||| ||||||| ||||||||||   ||| |||| ||||||| |||||||||| |||||||||||||    
T  917 ggtcaaaagagcatatttaccttatgttagaaggtcaaaatagcatatatccctaaacattggggtcactttt 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1875; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 812 - 756
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||||||| |||  |||||||||||||||||| |||| |||||||    
T  812 tagggggccaaaatcgcaacatttcgaaacttaaggggtgaaaagtgcagtttagcc 756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 39396 - 39344
Alignment:
Q  254 gggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  39396 gggccaaaattgtaactttttaaaacttaaggggggaaaagtgcactttagcc 39344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 250 - 306
Target Start/End: Original strand, 49478 - 49534
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||| |||||||||| ||| |||||||| ||||| ||||||||||||    
T  49478 tagggggccaaaattgcaacttttttaaagttaaggggagaaaagtgcactttagcc 49534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 19546 - 19488
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| ||||  |||| ||| |||||||| ||||||||||||||||||    
T  19546 cttagggggccaaaattgcaaggttttgaaaattaaggggggaaaaatgcactttagcc 19488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 17528 - 17470
Alignment:
Q  248 cttagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcc 306  Q
    |||||||||||||||| |||| ||||||||| ||||||||  |||| ||||||||||||    
T  17528 cttagggggccaaaattgcaagtttttaaaagttaagggggaaaaagtgcactttagcc 17470  T

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Target: scaffold0690 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 286
Target Start/End: Complemental strand, 4338 - 4302
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggg 286  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4338 tagggggccaaaatcgcaactttttgaaacttaaggg 4302  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 308
Target Start/End: Original strand, 166 - 222
Alignment:
Q  252 gggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    |||||||||||||||||| |||| ||| ||| |||| ||||| ||||||||||||||    
T  166 gggggccaaaatcgcaacgttttgaaagttagggggggaaaagtgcactttagccaa 222  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 250579 - 250703
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaa-gggtcataatcgcaattttttgagaagataaag 164  Q
    |||||||  ||||||||||||| ||| ||  |||||||||   |||||| |||||| ||||||||| ||| ||||||| ||| ||||||  ||||||| |    
T  250579 aaaaaatggcaattttggcccccttcatctgaaaattgctgagaagacgccacgtgccccaaaaaaggggccataatcacaactttttgtaaagataagg 250678  T
Q  165 agtcaaaagatcatatttcccttatg 190  Q
     ||||||| | |||||||||||||||    
T  250679 ggtcaaaa-aacatatttcccttatg 250703  T

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Target: scaffold0007; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 250574 - 250516
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagccaa 308  Q
    ||||||| |||| ||||||| ||||||||| || |||| ||||| ||||||||||||||    
T  250574 tagggggtcaaagtcgcaacattttaaaacatagggggcgaaaagtgcactttagccaa 250516  T

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Target: scaffold0683 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0683
Description:

Target: scaffold0683; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 69 - 134
Target Start/End: Original strand, 5182 - 5250
Alignment:
Q  69 aaaaaattacaattttggcccctttcttcccaaaattgct---aagacgacacgtgtcccaaaaaaggg 134  Q
    |||||||  ||||||||||||||||| ||| |||||||||   |||||| || ||||||||||||||||    
T  5182 aaaaaatggcaattttggcccctttcatccaaaaattgctgagaagacgtcatgtgtcccaaaaaaggg 5250  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 120 - 186
Target Start/End: Complemental strand, 54558 - 54492
Alignment:
Q  120 tgtcccaaaaaagggtcataatcgcaattttttgagaagataaagagtcaaaagatcatatttccct 186  Q
    ||||||||||| ||| ||||||||||| ||||||  ||||||| | | ||||||| |||||||||||    
T  54558 tgtcccaaaaaggggccataatcgcaactttttgtaaagataaggggccaaaagagcatatttccct 54492  T

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Target: scaffold2034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 307
Target Start/End: Complemental strand, 289 - 232
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcactttagcca 307  Q
    |||||| ||||||| |||||||||| ||| |||||||| | ||| |||||||||||||    
T  289 taggggaccaaaattgcaactttttgaaagttaagggggggaaagtgcactttagcca 232  T

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Target: scaffold0586 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 250 - 303
Target Start/End: Complemental strand, 6399 - 6346
Alignment:
Q  250 tagggggccaaaatcgcaactttttaaaacttaaggggtgaaaaatgcacttta 303  Q
    |||||||| ||||||| |||||||| |||||||||||  ||||| |||||||||    
T  6399 tagggggctaaaatcgtaactttttgaaacttaagggcggaaaagtgcacttta 6346  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 35263 - 35304
Alignment:
Q  195 ggggttaaaagagcatatttccctaaacatggggtcactttt 236  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||    
T  35263 ggggtcaaaagagtatatttccctaaacatgggatcactttt 35304  T

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