View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11069_low_1 (Length: 793)

Name: NF11069_low_1
Description: NF11069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11069_low_1
NF11069_low_1
[»] chr4 (36 HSPs)
chr4 (375-718)||(26665126-26665469)
chr4 (11-317)||(26664762-26665068)
chr4 (82-190)||(26658669-26658777)
chr4 (719-775)||(8392982-8393038)
chr4 (719-775)||(8395191-8395247)
chr4 (718-775)||(5135648-5135705)
chr4 (719-775)||(5137875-5137931)
chr4 (719-775)||(7122267-7122323)
chr4 (719-775)||(7124489-7124545)
chr4 (716-775)||(3814549-3814608)
chr4 (719-773)||(31495847-31495902)
chr4 (718-775)||(18860465-18860522)
chr4 (719-775)||(9223899-9223955)
chr4 (719-775)||(9228686-9228742)
chr4 (719-775)||(18856253-18856309)
chr4 (719-775)||(24742521-24742577)
chr4 (715-775)||(29761183-29761243)
chr4 (719-775)||(51520994-51521050)
chr4 (719-775)||(56141511-56141567)
chr4 (137-193)||(26643999-26644055)
chr4 (719-773)||(13992824-13992879)
chr4 (717-775)||(5733191-5733249)
chr4 (726-775)||(3778116-3778165)
chr4 (726-775)||(5143810-5143859)
chr4 (726-775)||(8689044-8689093)
chr4 (726-775)||(16628353-16628402)
chr4 (726-775)||(38151918-38151967)
chr4 (726-775)||(45347324-45347373)
chr4 (719-773)||(28467977-28468032)
chr4 (726-775)||(5148245-5148294)
chr4 (726-775)||(5268699-5268748)
chr4 (726-775)||(6742896-6742945)
chr4 (726-775)||(10047933-10047982)
chr4 (726-775)||(16622774-16622823)
chr4 (718-773)||(31985126-31985182)
chr4 (726-775)||(54867746-54867795)
[»] chr7 (28 HSPs)
chr7 (716-775)||(1562531-1562590)
chr7 (718-775)||(32060832-32060889)
chr7 (719-775)||(6592865-6592921)
chr7 (718-775)||(6595081-6595138)
chr7 (719-776)||(20343500-20343557)
chr7 (719-775)||(18392724-18392780)
chr7 (719-773)||(24789426-24789481)
chr7 (718-775)||(12406801-12406858)
chr7 (719-776)||(18390505-18390562)
chr7 (719-775)||(2058548-2058604)
chr7 (719-775)||(4873665-4873721)
chr7 (719-775)||(20357028-20357084)
chr7 (719-775)||(21640367-21640423)
chr7 (731-773)||(43504666-43504708)
chr7 (731-776)||(24023831-24023876)
chr7 (719-775)||(12397436-12397492)
chr7 (719-775)||(31109070-31109126)
chr7 (719-773)||(39730933-39730988)
chr7 (731-773)||(1532897-1532939)
chr7 (726-775)||(21983810-21983859)
chr7 (718-773)||(48408397-48408453)
chr7 (719-773)||(18414220-18414275)
chr7 (726-775)||(79956-80005)
chr7 (731-771)||(21646590-21646630)
chr7 (731-775)||(21811751-21811795)
chr7 (731-775)||(21989474-21989518)
chr7 (731-775)||(47264210-47264254)
chr7 (719-773)||(18409344-18409399)
[»] chr5 (40 HSPs)
chr5 (718-776)||(22536795-22536853)
chr5 (719-775)||(10592844-10592900)
chr5 (717-775)||(40379676-40379734)
chr5 (719-775)||(25077706-25077762)
chr5 (719-775)||(25135675-25135731)
chr5 (719-775)||(16543994-16544050)
chr5 (719-775)||(16546216-16546272)
chr5 (715-775)||(29402546-29402606)
chr5 (719-775)||(40381889-40381945)
chr5 (719-773)||(9789754-9789809)
chr5 (719-773)||(18442178-18442233)
chr5 (719-773)||(29719965-29720020)
chr5 (719-773)||(29722152-29722207)
chr5 (719-773)||(29752335-29752390)
chr5 (718-775)||(27450353-27450410)
chr5 (719-775)||(1456638-1456694)
chr5 (719-770)||(29751672-29751724)
chr5 (719-775)||(30631892-30631948)
chr5 (719-775)||(31180774-31180830)
chr5 (719-775)||(43592798-43592854)
chr5 (719-775)||(43599262-43599318)
chr5 (719-775)||(43604754-43604810)
chr5 (719-775)||(43610246-43610302)
chr5 (719-773)||(26177466-26177521)
chr5 (719-775)||(27445510-27445566)
chr5 (719-773)||(16407641-16407696)
chr5 (726-775)||(14520797-14520846)
chr5 (718-775)||(15045223-15045280)
chr5 (718-775)||(37556124-37556181)
chr5 (731-775)||(37560959-37561003)
chr5 (719-773)||(15465070-15465125)
chr5 (719-773)||(16409077-16409132)
chr5 (731-773)||(26170370-26170412)
chr5 (719-768)||(35388196-35388246)
chr5 (731-773)||(36931856-36931898)
chr5 (732-773)||(24136429-24136470)
chr5 (719-762)||(43625605-43625648)
chr5 (719-776)||(9352807-9352865)
chr5 (726-775)||(12083658-12083707)
chr5 (726-775)||(28807083-28807132)
[»] chr3 (54 HSPs)
chr3 (717-775)||(45282583-45282641)
chr3 (719-775)||(3617034-3617090)
chr3 (719-775)||(6718288-6718344)
chr3 (719-775)||(54634710-54634766)
chr3 (718-776)||(25637012-25637070)
chr3 (718-775)||(6716084-6716141)
chr3 (719-775)||(4599051-4599107)
chr3 (719-775)||(4601272-4601328)
chr3 (719-775)||(10055805-10055861)
chr3 (719-775)||(10058027-10058083)
chr3 (719-775)||(10060249-10060305)
chr3 (719-775)||(10062471-10062527)
chr3 (719-775)||(10064693-10064749)
chr3 (719-775)||(10066915-10066971)
chr3 (719-775)||(10208778-10208834)
chr3 (719-775)||(10210978-10211034)
chr3 (714-775)||(7167826-7167887)
chr3 (718-775)||(40372255-40372312)
chr3 (719-775)||(22172662-22172718)
chr3 (719-773)||(800685-800740)
chr3 (717-775)||(28501150-28501208)
chr3 (717-773)||(26928078-26928135)
chr3 (719-775)||(8477946-8478002)
chr3 (719-775)||(8738542-8738598)
chr3 (719-775)||(9090780-9090836)
chr3 (719-775)||(28503319-28503375)
chr3 (719-773)||(7782657-7782712)
chr3 (719-773)||(23198475-23198530)
chr3 (719-773)||(23200674-23200729)
chr3 (728-775)||(40734084-40734131)
chr3 (717-775)||(18656973-18657031)
chr3 (726-775)||(16264897-16264946)
chr3 (726-775)||(21711769-21711818)
chr3 (726-775)||(30709266-30709315)
chr3 (719-775)||(32143871-32143928)
chr3 (726-775)||(36029660-36029709)
chr3 (731-775)||(27027274-27027318)
chr3 (731-775)||(27974446-27974490)
chr3 (718-773)||(37726244-37726300)
chr3 (719-776)||(37408036-37408094)
chr3 (726-775)||(39032025-39032074)
chr3 (719-770)||(1306552-1306604)
chr3 (731-775)||(2672431-2672475)
chr3 (731-775)||(2676587-2676631)
chr3 (726-769)||(1730916-1730959)
chr3 (732-775)||(27985971-27986014)
chr3 (719-773)||(33386137-33386192)
chr3 (728-775)||(40735015-40735062)
chr3 (726-775)||(27038609-27038658)
chr3 (718-775)||(27352080-27352137)
chr3 (726-775)||(35926058-35926106)
chr3 (726-775)||(40592252-40592301)
chr3 (719-775)||(40845222-40845279)
chr3 (726-775)||(48438783-48438832)
[»] chr6 (33 HSPs)
chr6 (718-775)||(16579045-16579102)
chr6 (718-775)||(16616278-16616335)
chr6 (717-775)||(6136491-6136549)
chr6 (719-775)||(16554454-16554510)
chr6 (719-775)||(16631010-16631066)
chr6 (719-775)||(16652716-16652772)
chr6 (719-771)||(25420797-25420849)
chr6 (709-775)||(34151818-34151884)
chr6 (709-775)||(34164434-34164500)
chr6 (719-776)||(6026834-6026891)
chr6 (727-776)||(27647476-27647525)
chr6 (714-775)||(30125013-30125074)
chr6 (719-775)||(33342632-33342688)
chr6 (719-775)||(34166666-34166722)
chr6 (717-773)||(411683-411740)
chr6 (719-775)||(5266597-5266653)
chr6 (719-775)||(11857511-11857567)
chr6 (719-775)||(14737085-14737141)
chr6 (719-775)||(14741926-14741982)
chr6 (719-775)||(22010189-22010245)
chr6 (719-773)||(3073288-3073343)
chr6 (717-773)||(6097931-6097988)
chr6 (718-775)||(13150848-13150905)
chr6 (719-773)||(26253589-26253644)
chr6 (718-775)||(6439027-6439084)
chr6 (726-774)||(28155097-28155145)
chr6 (731-770)||(5674242-5674281)
chr6 (719-773)||(22709590-22709645)
chr6 (726-775)||(5016976-5017025)
chr6 (726-775)||(31085953-31086002)
chr6 (732-770)||(2172052-2172090)
chr6 (726-775)||(5344008-5344057)
chr6 (726-771)||(21272469-21272514)
[»] chr2 (23 HSPs)
chr2 (718-775)||(12647911-12647968)
chr2 (716-775)||(32247296-32247355)
chr2 (717-775)||(9295860-9295918)
chr2 (718-775)||(11098386-11098443)
chr2 (718-775)||(39811476-39811533)
chr2 (719-775)||(14292069-14292125)
chr2 (719-775)||(44310471-44310527)
chr2 (719-773)||(6266274-6266329)
chr2 (718-773)||(4484868-4484924)
chr2 (719-773)||(32289148-32289203)
chr2 (731-773)||(25410211-25410253)
chr2 (726-775)||(8389631-8389680)
chr2 (719-770)||(30832921-30832973)
chr2 (719-773)||(40739402-40739457)
chr2 (726-775)||(10706733-10706782)
chr2 (726-775)||(21630512-21630561)
chr2 (726-771)||(33528105-33528150)
chr2 (726-775)||(36757425-36757474)
chr2 (726-775)||(39483444-39483493)
chr2 (718-773)||(3492322-3492378)
chr2 (726-770)||(20522794-20522838)
chr2 (731-775)||(28258682-28258726)
chr2 (726-775)||(23077952-23078001)
[»] chr1 (22 HSPs)
chr1 (718-775)||(44203217-44203274)
chr1 (719-775)||(9036003-9036059)
chr1 (719-773)||(21053540-21053594)
chr1 (719-773)||(9986785-9986840)
chr1 (719-773)||(20622766-20622821)
chr1 (717-775)||(39446026-39446084)
chr1 (719-775)||(24793666-24793722)
chr1 (719-775)||(44023377-44023433)
chr1 (719-773)||(40281958-40282013)
chr1 (719-776)||(13604095-13604153)
chr1 (719-775)||(1054514-1054570)
chr1 (731-775)||(41391129-41391173)
chr1 (719-773)||(24202251-24202306)
chr1 (726-775)||(13598968-13599017)
chr1 (726-775)||(25439406-25439455)
chr1 (726-775)||(25444599-25444648)
chr1 (717-773)||(51764988-51765045)
chr1 (731-775)||(21536125-21536169)
chr1 (731-775)||(41398765-41398809)
chr1 (719-773)||(19360912-19360967)
chr1 (719-773)||(19365768-19365823)
chr1 (732-775)||(37070335-37070378)
[»] scaffold0565 (1 HSPs)
scaffold0565 (719-775)||(3129-3185)
[»] chr8 (25 HSPs)
chr8 (716-775)||(25689558-25689617)
chr8 (719-775)||(15290143-15290199)
chr8 (719-775)||(15470512-15470568)
chr8 (719-775)||(42575853-42575909)
chr8 (719-776)||(3439088-3439145)
chr8 (717-775)||(4759532-4759590)
chr8 (718-775)||(25327663-25327720)
chr8 (719-775)||(10683739-10683795)
chr8 (719-775)||(10688618-10688674)
chr8 (719-775)||(18870021-18870077)
chr8 (719-775)||(30656226-30656282)
chr8 (719-775)||(33037287-33037343)
chr8 (719-775)||(36979958-36980014)
chr8 (719-775)||(39784325-39784381)
chr8 (719-773)||(2627318-2627373)
chr8 (715-773)||(26288462-26288521)
chr8 (715-773)||(26301719-26301778)
chr8 (715-773)||(26313713-26313772)
chr8 (719-775)||(7289427-7289483)
chr8 (719-775)||(18852627-18852683)
chr8 (726-775)||(5701959-5702008)
chr8 (726-775)||(6311879-6311928)
chr8 (731-775)||(7412895-7412939)
chr8 (719-773)||(31042908-31042963)
chr8 (731-775)||(4456576-4456620)
[»] scaffold0674 (1 HSPs)
scaffold0674 (719-775)||(4254-4310)
[»] scaffold0137 (1 HSPs)
scaffold0137 (719-775)||(5859-5915)
[»] scaffold1455 (1 HSPs)
scaffold1455 (719-775)||(1709-1765)
[»] scaffold0665 (1 HSPs)
scaffold0665 (719-775)||(8217-8273)
[»] scaffold0135 (1 HSPs)
scaffold0135 (719-775)||(34554-34610)
[»] scaffold0006 (3 HSPs)
scaffold0006 (719-776)||(132752-132810)
scaffold0006 (726-775)||(6253-6302)
scaffold0006 (726-775)||(3061-3110)
[»] scaffold0464 (1 HSPs)
scaffold0464 (718-775)||(889-946)
[»] scaffold0355 (1 HSPs)
scaffold0355 (718-775)||(3336-3393)
[»] scaffold0188 (1 HSPs)
scaffold0188 (718-773)||(17430-17486)
[»] scaffold0491 (2 HSPs)
scaffold0491 (719-773)||(9253-9308)
scaffold0491 (716-773)||(11698-11756)
[»] scaffold0140 (1 HSPs)
scaffold0140 (719-773)||(7911-7966)
[»] scaffold0098 (1 HSPs)
scaffold0098 (718-771)||(45751-45805)
[»] scaffold0286 (1 HSPs)
scaffold0286 (732-770)||(21953-21991)
[»] scaffold0087 (2 HSPs)
scaffold0087 (726-775)||(36332-36381)
scaffold0087 (731-776)||(43447-43492)


Alignment Details
Target: chr4 (Bit Score: 296; Significance: 1e-166; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 375 - 718
Target Start/End: Original strand, 26665126 - 26665469
Alignment:
Q  375 tacgtaacatttcggaagaatgaatgaataatatgcaacgatgaccaatgtaagagcaaaatgcagaaagaatggcatgtctggtacctgaagaagaaaa 474  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  26665126 tacgtaacatttcggaagaatgaatgaataatatgcaaccatgaacaatgtaagagcaaaatgcagaaagaatggcacgtctggtacctgaagaagaaaa 26665225  T
Q  475 tgttacagaatcacgagattgtaatggatcttccatttcaacgacactgttctgnnnnnnnnctttcactttcacacaaacactagtctgttttgttata 574  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||| ||||||||||||||||||||||||    
T  26665226 tgttacagaatcacgagattgtaatggatcttccatttcaacgacactgttctgttctttttctttcactttcacgcaaacactagtctgttttgttata 26665325  T
Q  575 acatgttactcttcactctccaccgcacgtctcatgttttttatttccatcaatattacccatagaattagtttacgcctatatatattgcaaactagcc 674  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26665326 acatgttactcttcactctccaccgcacgtctcatgttttttatttccatcaatattacccatagaattagtttacgcctatatatattgcaaactagcc 26665425  T
Q  675 agatgtctccttgtcaagtgtgagttaagtcatataaaagatat 718  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  26665426 agatgtctctttgtcaagtgtgaattaagtcatataaaagatat 26665469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 11 - 317
Target Start/End: Original strand, 26664762 - 26665068
Alignment:
Q  11 cacagaaaatagtggtttatttaaattccgctataatgcagtgttataacatcgctggagccgctattcaataacacggtcaatatagggcaccttaaca 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26664762 cacagaaaatagtggtttatttaaattccgctataatgcagtgttataacatcgctggagccgctattcaataacacggtcaatatagggcaccttaaca 26664861  T
Q  111 tcatgtgataatcatcgtgcttctgaggaagcaattcatccatgatcaacgatttccgaaacgcatcaacaacagcaggaacaacatcaacagcctgtaa 210  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26664862 tcatgtgataatcatcgtgcttctgaggaagcaattcatccatgatcaacaatttccgaaacgcatcaacaacagcaggaacaacattaacagcctgtaa 26664961  T
Q  211 ctcatcaacacgctttttcttgaaagaatgcttaaactttgaaaatgcattgagcagtttcttcttaaaatcagatctcctttctcttctattctcatcc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  26664962 ctcatcaacacgctttttcttgaaagaatgcttaaactttgaaaatgcattgagcagtttcttcttaaaatcagatctcctttcttttctattctcatca 26665061  T
Q  311 ctgcctg 317  Q
    |||||||    
T  26665062 ctgcctg 26665068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 26658669 - 26658777
Alignment:
Q  82 taacacggtcaatatagggcaccttaacatcatgtgataatcatcgtgcttctgaggaagcaattcatccatgatcaacgatttccgaaacgcatcaaca 181  Q
    |||||||  ||||||| |||||||||||||| | |||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||    
T  26658669 taacacgaccaatatacggcaccttaacatcttatgataatcatcgtgcttctcgggaagcaattcatccatgatcaacgatttccgaaaggcatcaaca 26658768  T
Q  182 acagcagga 190  Q
    |||||||||    
T  26658769 acagcagga 26658777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 8392982 - 8393038
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8392982 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 8393038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 8395191 - 8395247
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8395191 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 8395247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 5135648 - 5135705
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5135648 ttgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 5135705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 5137875 - 5137931
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  5137875 tgttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 5137931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 7122267 - 7122323
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7122267 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgatt 7122323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 7124489 - 7124545
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  7124489 tgttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgatt 7124545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 716 - 775
Target Start/End: Complemental strand, 3814608 - 3814549
Alignment:
Q  716 tattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  3814608 tattgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 3814549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 31495902 - 31495847
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31495902 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 31495847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 18860522 - 18860465
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18860522 ttgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 18860465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 9223899 - 9223955
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9223899 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 9223955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 9228686 - 9228742
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9228686 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 9228742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 18856309 - 18856253
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18856309 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 18856253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 24742577 - 24742521
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24742577 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 24742521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 715 - 775
Target Start/End: Complemental strand, 29761243 - 29761183
Alignment:
Q  715 atattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||| |||  ||||||||||||||||||||||||||| |||||||||||||||||    
T  29761243 atattgttgatatttgcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 29761183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 51521050 - 51520994
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  51521050 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 51520994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 56141511 - 56141567
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  56141511 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 56141567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 26643999 - 26644055
Alignment:
Q  137 ggaagcaattcatccatgatcaacgatttccgaaacgcatcaacaacagcaggaaca 193  Q
    |||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||    
T  26643999 ggaagcaattcatcgatgatcaacgattgccgaaaagcatcaacagcagcaggaaca 26644055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 13992879 - 13992824
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  13992879 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 13992824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 775
Target Start/End: Complemental strand, 5733249 - 5733191
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||| |||| |||||||||||||||||| |||||||| |||||| ||||||||||    
T  5733249 attgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgatt 5733191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 3778165 - 3778116
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  3778165 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 5143859 - 5143810
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  5143859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 5143810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 8689044 - 8689093
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  8689044 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 8689093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 16628353 - 16628402
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  16628353 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 16628402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 38151918 - 38151967
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  38151918 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 38151967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 45347324 - 45347373
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgatt 45347373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 28467977 - 28468032
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||    
T  28467977 tgttgagatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacga 28468032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 5148294 - 5148245
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| |||||||| || |||||||||||||||||    
T  5148294 attggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgatt 5148245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 5268699 - 5268748
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  5268699 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatt 5268748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 6742896 - 6742945
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| |||||||||| |||| ||||||||||| |||||||||||||||||    
T  6742896 attggcttcaaatttatggtttggaagaacagagaaatcgtgacacgatt 6742945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 10047982 - 10047933
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  10047982 attggcttcaaatttgtggtttggaagaacagataaatcgtgacacgatt 10047933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 16622774 - 16622823
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||| ||||||||||| ||||||||||| |||||||||||||||||    
T  16622774 attggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgatt 16622823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 718 - 773
Target Start/End: Original strand, 31985126 - 31985182
Alignment:
Q  718 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||| | ||||||||||||| |||| |||||||| |||||||||||||||    
T  31985126 ttgttgagatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacga 31985182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 54867795 - 54867746
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| |||||||| || ||| |||||||||||||    
T  54867795 attggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgatt 54867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 4e-25; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 716 - 775
Target Start/End: Complemental strand, 1562590 - 1562531
Alignment:
Q  716 tattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562590 tattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 1562531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 32060889 - 32060832
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060889 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 32060832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 6592921 - 6592865
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592921 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 6592865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 6595138 - 6595081
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6595138 ttgttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgatt 6595081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 20343500 - 20343557
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  20343500 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattg 20343557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 18392780 - 18392724
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  18392780 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgatt 18392724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 24789426 - 24789481
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24789426 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 24789481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 12406858 - 12406801
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  12406858 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 12406801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 719 - 776
Target Start/End: Complemental strand, 18390562 - 18390505
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||    
T  18390562 tgttgagattgtcttcaaatttgtggtttagaagaacagggaaatcgtgccacgattg 18390505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 2058604 - 2058548
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  2058604 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 2058548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 4873721 - 4873665
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  4873721 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 4873665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 20357028 - 20357084
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  20357028 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 20357084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 21640423 - 21640367
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  21640423 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 21640367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 731 - 773
Target Start/End: Complemental strand, 43504708 - 43504666
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 43504666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 731 - 776
Target Start/End: Original strand, 24023831 - 24023876
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattg 24023876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 12397492 - 12397436
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  12397492 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgatt 12397436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 31109070 - 31109126
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  31109070 tgttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 31109126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 39730933 - 39730988
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  39730933 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 39730988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 731 - 773
Target Start/End: Original strand, 1532897 - 1532939
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1532897 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 1532939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 21983859 - 21983810
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  21983859 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 21983810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 718 - 773
Target Start/End: Original strand, 48408397 - 48408453
Alignment:
Q  718 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||| | |||||||||||||||||| |||||||| |||||||||||||||    
T  48408397 ttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 48408453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 18414275 - 18414220
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||| |||||||||||||||| |||||||||||||||    
T  18414275 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacga 18414220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 80005 - 79956
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||| | ||||||||||| |||||||||||||||||    
T  80005 attggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgatt 79956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 771
Target Start/End: Complemental strand, 21646630 - 21646590
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacac 771  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacac 21646590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 21811751 - 21811795
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||    
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgatt 21811795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 21989518 - 21989474
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  21989518 cttcaaatttgtggtttggaagaacagagaaatcgtgacaagatt 21989474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 47264254 - 47264210
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| |||||||| || |||||||||||||||||    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgatt 47264210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 18409399 - 18409344
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||| ||||||||||||| |||||||| ||||||    
T  18409399 tgttgagatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacga 18409344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 718 - 776
Target Start/End: Complemental strand, 22536853 - 22536795
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22536853 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 22536795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10592844 - 10592900
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10592844 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 10592900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 40379676 - 40379734
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40379676 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgatt 40379734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 25077706 - 25077762
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25077706 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 25077762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 25135675 - 25135731
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135675 tgttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 25135731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 16543994 - 16544050
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  16543994 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgatt 16544050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 16546216 - 16546272
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  16546216 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgatt 16546272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 715 - 775
Target Start/End: Original strand, 29402546 - 29402606
Alignment:
Q  715 atattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  29402546 atattgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 29402606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 40381889 - 40381945
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  40381889 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgatt 40381945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 9789809 - 9789754
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9789809 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 9789754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 18442233 - 18442178
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18442233 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 18442178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 29719965 - 29720020
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29719965 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 29720020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 29722152 - 29722207
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29722152 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 29722207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 29752390 - 29752335
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  29752390 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 29752335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 27450410 - 27450353
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  27450410 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 27450353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 1456638 - 1456694
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  1456638 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 1456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 770
Target Start/End: Complemental strand, 29751724 - 29751672
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29751724 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 29751672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 30631948 - 30631892
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  30631948 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 30631892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 31180830 - 31180774
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  31180830 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 31180774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 43592854 - 43592798
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43592854 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 43592798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 43599318 - 43599262
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43599318 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 43599262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 43604810 - 43604754
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43604810 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 43604754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 43610302 - 43610246
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  43610302 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 43610246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 26177466 - 26177521
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  26177466 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 26177521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 27445566 - 27445510
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||| ||||||||| |||||||||||||||||    
T  27445566 tgttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgatt 27445510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 16407641 - 16407696
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  16407641 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 16407696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 14520846 - 14520797
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  14520846 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 14520797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 15045280 - 15045223
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  15045280 ttgttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgatt 15045223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 37556124 - 37556181
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||  ||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  37556124 ttgttgaatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatt 37556181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 37560959 - 37561003
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| | |||||||||||||||    
T  37560959 cttcaaatttgtggtctggaagaacagagtaatcgtgacacgatt 37561003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 15465125 - 15465070
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||    
T  15465125 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 15465070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 16409077 - 16409132
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||    
T  16409077 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 16409132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 731 - 773
Target Start/End: Original strand, 26170370 - 26170412
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||| |||||||||||||||||||||||||||    
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacga 26170412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 768
Target Start/End: Complemental strand, 35388246 - 35388196
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtga 768  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  35388246 tgttgagatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 731 - 773
Target Start/End: Original strand, 36931856 - 36931898
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  36931856 cttcaaatttgtggtttggaagaacagagaaatcgtgacacga 36931898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 773
Target Start/End: Complemental strand, 24136470 - 24136429
Alignment:
Q  732 ttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||||||||||||||||  |||||||||||||||    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacga 24136429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 719 - 762
Target Start/End: Complemental strand, 43625648 - 43625605
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaa 762  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||    
T  43625648 tgttgatattggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 9352807 - 9352865
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||| | ||||||||||||||| || |||||||| ||||||||||| ||||||    
T  9352807 tgttgagatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattg 9352865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 12083658 - 12083707
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||| |||||| |||| ||||||||||| |||||||||||||||||    
T  12083658 attggctttaaatttatggtttggaagaacagagaaatcgtgacacgatt 12083707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 28807083 - 28807132
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| |||||||||| |||||||||||||||| | ||||||| |||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgatt 28807132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 45282583 - 45282641
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45282583 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 45282641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 3617034 - 3617090
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617034 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 3617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 6718288 - 6718344
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6718288 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 6718344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 54634710 - 54634766
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54634710 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 54634766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 718 - 776
Target Start/End: Original strand, 25637012 - 25637070
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25637012 ttgttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattg 25637070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 6716084 - 6716141
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6716084 ttgttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgatt 6716141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 4599107 - 4599051
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4599107 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 4599051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 4601328 - 4601272
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4601328 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 4601272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10055805 - 10055861
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10055805 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10055861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10058027 - 10058083
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10058027 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10058083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10060249 - 10060305
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10060249 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10060305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10062471 - 10062527
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10062471 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10062527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10064693 - 10064749
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10064693 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10066915 - 10066971
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10066915 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10066971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10208778 - 10208834
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  10208778 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgatt 10208834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10210978 - 10211034
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  10210978 tgttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgatt 10211034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 714 - 775
Target Start/End: Complemental strand, 7167887 - 7167826
Alignment:
Q  714 gatattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||    
T  7167887 gatattgttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgatt 7167826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 40372255 - 40372312
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  40372255 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 40372312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 22172662 - 22172718
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  22172662 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 22172718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 800685 - 800740
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  800685 tgttgagatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacga 800740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 28501150 - 28501208
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  28501150 attgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgatt 28501208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 26928078 - 26928135
Alignment:
Q  717 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  26928078 attgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 26928135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 8478002 - 8477946
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  8478002 tgttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgatt 8477946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 8738542 - 8738598
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  8738542 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgatt 8738598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 9090780 - 9090836
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||    
T  9090780 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgatt 9090836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 28503319 - 28503375
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  28503319 tgttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgatt 28503375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 7782712 - 7782657
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  7782712 tgttgagatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacga 7782657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 23198530 - 23198475
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  23198530 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 23198475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 23200729 - 23200674
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  23200729 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 23200674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 728 - 775
Target Start/End: Original strand, 40734084 - 40734131
Alignment:
Q  728 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  40734084 tgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 40734131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 717 - 775
Target Start/End: Complemental strand, 18657031 - 18656973
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||| |||| |||||||||||||||||| |||||||| |||||| ||||||||||    
T  18657031 attgttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgatt 18656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 16264946 - 16264897
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  16264946 attggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgatt 16264897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 21711818 - 21711769
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  21711818 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 21711769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 30709266 - 30709315
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  30709266 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 30709315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 32143928 - 32143871
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||||    
T  32143928 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgatt 32143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 36029709 - 36029660
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  36029709 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 36029660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 27027318 - 27027274
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 27027274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 27974446 - 27974490
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  27974446 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 27974490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 718 - 773
Target Start/End: Complemental strand, 37726300 - 37726244
Alignment:
Q  718 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||    
T  37726300 ttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacga 37726244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 37408036 - 37408094
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||||    
T  37408036 tgttgagatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattg 37408094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 39032025 - 39032074
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  39032025 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgatt 39032074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 719 - 770
Target Start/End: Complemental strand, 1306604 - 1306552
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||||||||    
T  1306604 tgttgagatttggcttcaaatttatggtctggaagaacagagaaatcgtgaca 1306552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 2672431 - 2672475
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgatt 2672475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 2676587 - 2676631
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||    
T  2676587 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgatt 2676631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 726 - 769
Target Start/End: Original strand, 1730916 - 1730959
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgac 769  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||    
T  1730916 attggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 775
Target Start/End: Original strand, 27985971 - 27986014
Alignment:
Q  732 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgatt 27986014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 33386137 - 33386192
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||| | |||||||| |||||||||||||||    
T  33386137 tgttgagatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacga 33386192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 728 - 775
Target Start/End: Original strand, 40735015 - 40735062
Alignment:
Q  728 tgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||| |||| ||||||  ||||||||||||||||    
T  40735015 tgtcttcaaatttgtggtttggatgaacagataaatcgtgacacgatt 40735062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 27038658 - 27038609
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| |||||| |||||||| ||||| ||||| |||||||||||||||||    
T  27038658 attggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgatt 27038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 27352080 - 27352137
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||  ||| ||||||||||||| |||||||||  ||||||||||||||||    
T  27352080 ttgttgatattagctttaaatttgtggtctcgaagaacagaaaaatcgtgacacgatt 27352137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 35926106 - 35926058
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||| ||| ||||||||||| |||||||||||||||||    
T  35926106 attggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgatt 35926058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 40592252 - 40592301
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||| | |||||||||||| ||||    
T  40592252 attggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgatt 40592301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 40845279 - 40845222
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||| |||||||||||| || | ||| ||||||| |||||||||||||||||    
T  40845279 tgttgagatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatt 40845222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 48438832 - 48438783
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||| ||||||||||| || |||||||| |||||||||||||||||    
T  48438832 attggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgatt 48438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 6e-24; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 16579102 - 16579045
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16579102 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 16579045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 16616278 - 16616335
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616278 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 16616335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 717 - 775
Target Start/End: Complemental strand, 6136549 - 6136491
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6136549 attgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 6136491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 16554454 - 16554510
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16554454 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgatt 16554510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 16631010 - 16631066
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16631010 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgatt 16631066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 16652716 - 16652772
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16652716 tgttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgatt 16652772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 771
Target Start/End: Original strand, 25420797 - 25420849
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 771  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25420797 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 25420849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 709 - 775
Target Start/End: Original strand, 34151818 - 34151884
Alignment:
Q  709 taaaagatattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34151818 taaaagttattgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 34151884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 709 - 775
Target Start/End: Original strand, 34164434 - 34164500
Alignment:
Q  709 taaaagatattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  34164434 taaaagttattgttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 34164500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 6026834 - 6026891
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  6026834 tgttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattg 6026891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 727 - 776
Target Start/End: Original strand, 27647476 - 27647525
Alignment:
Q  727 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 27647525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 714 - 775
Target Start/End: Original strand, 30125013 - 30125074
Alignment:
Q  714 gatattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  30125013 gatattgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 30125074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 33342688 - 33342632
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  33342688 tgttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgatt 33342632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 34166666 - 34166722
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34166666 tgttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 34166722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 411683 - 411740
Alignment:
Q  717 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  411683 attgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacga 411740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 5266653 - 5266597
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  5266653 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 5266597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 11857567 - 11857511
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  11857567 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 11857511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 14737085 - 14737141
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  14737085 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 14737141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 14741926 - 14741982
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  14741926 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 14741982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 22010189 - 22010245
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  22010189 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 22010245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 3073343 - 3073288
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  3073343 tgttgagatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacga 3073288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 717 - 773
Target Start/End: Complemental strand, 6097988 - 6097931
Alignment:
Q  717 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  6097988 attgttgagatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacga 6097931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 13150848 - 13150905
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||| || ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  13150848 ttgtttagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgatt 13150905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 26253589 - 26253644
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  26253589 tgttgagatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 26253644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 6439084 - 6439027
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| |||||||||| |||||||||||||||  |||||||||||||||||    
T  6439084 ttgttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgatt 6439027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 726 - 774
Target Start/End: Original strand, 28155097 - 28155145
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgat 774  Q
    |||| ||||||||||||||||||||||||||| | ||||||||||||||    
T  28155097 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 731 - 770
Target Start/End: Original strand, 5674242 - 5674281
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgaca 5674281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 22709645 - 22709590
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||| ||||||||    
T  22709645 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacga 22709590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 5016976 - 5017025
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  5016976 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgatt 5017025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 31085953 - 31086002
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| | ||||||||| |||||||||||||||||    
T  31085953 attggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgatt 31086002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 732 - 770
Target Start/End: Complemental strand, 2172090 - 2172052
Alignment:
Q  732 ttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggaca 2172052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 5344057 - 5344008
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||| ||||||| ||||||||| |||||||    
T  5344057 attggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatt 5344008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 771
Target Start/End: Original strand, 21272469 - 21272514
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 771  Q
    |||| ||||||||||||| | |||| ||||||||||||||||||||    
T  21272469 attggcttcaaatttgtgttttggaggaacagggaaatcgtgacac 21272514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 6e-24; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 12647968 - 12647911
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647968 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 12647911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 716 - 775
Target Start/End: Complemental strand, 32247355 - 32247296
Alignment:
Q  716 tattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  32247355 tattgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 32247296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 9295860 - 9295918
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9295860 attgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 9295918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 11098386 - 11098443
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  11098386 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 11098443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 39811476 - 39811533
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  39811476 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 39811533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 14292125 - 14292069
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  14292125 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 14292069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 44310471 - 44310527
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  44310471 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 44310527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 6266274 - 6266329
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  6266274 tgttgagatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacga 6266329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 718 - 773
Target Start/End: Complemental strand, 4484924 - 4484868
Alignment:
Q  718 ttgttgagattgt-cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  4484924 ttgttgagattttacttcaaatttgtggtctggaagaacagagaaatcgtgacacga 4484868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 32289148 - 32289203
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  32289148 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 32289203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 731 - 773
Target Start/End: Complemental strand, 25410253 - 25410211
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacga 25410211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 8389631 - 8389680
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  8389631 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 8389680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 719 - 770
Target Start/End: Original strand, 30832921 - 30832973
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    |||||||||| | ||||||||||||||||||||||||||| ||||||||||||    
T  30832921 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgaca 30832973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 40739457 - 40739402
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||||||||||||  ||||||||||||||    
T  40739457 tgttgagatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacga 40739402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 10706733 - 10706782
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  10706733 attggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgatt 10706782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 21630561 - 21630512
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| |||||||||||| || ||||||||||| |||||||||||||||||    
T  21630561 attggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgatt 21630512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 771
Target Start/End: Original strand, 33528105 - 33528150
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 771  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||    
T  33528105 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacac 33528150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 36757425 - 36757474
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| |||||||||||  ||||||||||||||||    
T  36757425 attggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgatt 36757474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 39483493 - 39483444
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| ||||| |||||||||||    
T  39483493 attggcttcaaatttgtggtttggaagaacagagaaattgtgacacgatt 39483444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 718 - 773
Target Start/End: Complemental strand, 3492378 - 3492322
Alignment:
Q  718 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||| | |||||||||||||||||| |||||||| ||||| |||||||||    
T  3492378 ttgttgagatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacga 3492322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 726 - 770
Target Start/End: Complemental strand, 20522838 - 20522794
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    |||| ||||||||||||||| ||||||||||| ||||||||||||    
T  20522838 attggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 28258682 - 28258726
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||| ||||| |||||||||||||||||    
T  28258682 cttcaaatttgtggtttggaaaaacagagaaatcgtgacacgatt 28258726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 23077952 - 23078001
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||| || |||| ||||||||||| |||||||||||||||||    
T  23077952 attggcttcaaaattttggtttggaagaacagagaaatcgtgacacgatt 23078001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 6e-24; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 44203217 - 44203274
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203217 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 44203274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 9036003 - 9036059
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036003 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 9036059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 21053540 - 21053594
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21053540 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 21053594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 9986785 - 9986840
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9986785 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 9986840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 20622821 - 20622766
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20622821 tgttgagatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 20622766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 775
Target Start/End: Complemental strand, 39446084 - 39446026
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  39446084 attgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 39446026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 24793666 - 24793722
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24793666 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 24793722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 44023377 - 44023433
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  44023377 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 44023433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 40281958 - 40282013
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  40281958 tgttgagatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacga 40282013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 13604095 - 13604153
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  13604095 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattg 13604153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 1054514 - 1054570
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||    
T  1054514 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgatt 1054570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 41391173 - 41391129
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  41391173 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 41391129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 24202251 - 24202306
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  24202251 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 24202306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 13599017 - 13598968
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  13599017 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 13598968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 25439406 - 25439455
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatt 25439455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 25444599 - 25444648
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||||||||||||||| | |||||||||||||||    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatt 25444648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 717 - 773
Target Start/End: Original strand, 51764988 - 51765045
Alignment:
Q  717 attgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||    
T  51764988 attgttgagatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacga 51765045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 775
Target Start/End: Original strand, 21536125 - 21536169
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  21536125 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 21536169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 41398809 - 41398765
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||| |||||||| |||||||||||||||||    
T  41398809 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgatt 41398765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 19360912 - 19360967
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||    
T  19360912 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 19360967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 19365768 - 19365823
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||    
T  19365768 tgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 19365823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 732 - 775
Target Start/End: Complemental strand, 37070378 - 37070335
Alignment:
Q  732 ttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  37070378 ttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 37070335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 3185 - 3129
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3185 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 3129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 9e-23; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 716 - 775
Target Start/End: Original strand, 25689558 - 25689617
Alignment:
Q  716 tattgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25689558 tattgttgagattgtcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 25689617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 15290143 - 15290199
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15290143 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 15290199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 15470512 - 15470568
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  15470512 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 15470568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 42575909 - 42575853
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42575909 tgttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgatt 42575853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 3439088 - 3439145
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  3439088 tgttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattg 3439145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 717 - 775
Target Start/End: Original strand, 4759532 - 4759590
Alignment:
Q  717 attgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  4759532 attgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 4759590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 25327663 - 25327720
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  25327663 ttgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 25327720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10683739 - 10683795
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  10683739 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 10683795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 10688618 - 10688674
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  10688618 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 10688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 18870021 - 18870077
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  18870021 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 18870077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 30656282 - 30656226
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  30656282 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 30656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 33037287 - 33037343
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  33037287 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 33037343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 36980014 - 36979958
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  36980014 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 36979958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 39784325 - 39784381
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  39784325 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 39784381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 2627318 - 2627373
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  2627318 tgttgagatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 2627373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 773
Target Start/End: Complemental strand, 26288521 - 26288462
Alignment:
Q  715 atattgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26288521 atattgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacga 26288462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 773
Target Start/End: Complemental strand, 26301778 - 26301719
Alignment:
Q  715 atattgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26301778 atattgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacga 26301719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 715 - 773
Target Start/End: Complemental strand, 26313772 - 26313713
Alignment:
Q  715 atattgttgaga-ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  26313772 atattgttgagacttgacttcaaatttgtggtctggaagaacagagaaatcgtgacacga 26313713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 7289427 - 7289483
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||| |||||||||||    
T  7289427 tgttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgatt 7289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 18852627 - 18852683
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  18852627 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgatt 18852683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 5701959 - 5702008
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  5701959 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 5702008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 6311928 - 6311879
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgatt 6311879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 7412939 - 7412895
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||    
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 7412895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 31042908 - 31042963
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||||||||| || |||||||||||||||    
T  31042908 tgttgagatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacga 31042963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 731 - 775
Target Start/End: Complemental strand, 4456620 - 4456576
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||    
T  4456620 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgatt 4456576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 4310 - 4254
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4310 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgatt 4254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 5859 - 5915
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5859 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgatt 5915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 1709 - 1765
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  1709 tgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 1765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Complemental strand, 8273 - 8217
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  8273 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 8217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 719 - 775
Target Start/End: Original strand, 34554 - 34610
Alignment:
Q  719 tgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  34554 tgttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgatt 34610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 719 - 776
Target Start/End: Original strand, 132752 - 132810
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  132752 tgttgagatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattg 132810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 6302 - 6253
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  6302 attggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 6253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 726 - 775
Target Start/End: Complemental strand, 3110 - 3061
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  3110 attggcttcaaatttgtggtttggaagaacagagaaatcatgacacgatt 3061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 718 - 775
Target Start/End: Complemental strand, 946 - 889
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||    
T  946 ttgttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgatt 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 718 - 775
Target Start/End: Original strand, 3336 - 3393
Alignment:
Q  718 ttgttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    ||||||| |||| |||||||||||||||||||||||| || |||||||||||||||||    
T  3336 ttgttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgatt 3393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 718 - 773
Target Start/End: Original strand, 17430 - 17486
Alignment:
Q  718 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  17430 ttgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 17486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 719 - 773
Target Start/End: Complemental strand, 9308 - 9253
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  9308 tgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacga 9253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 716 - 773
Target Start/End: Complemental strand, 11756 - 11698
Alignment:
Q  716 tattgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    ||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||    
T  11756 tattgttgagatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacga 11698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 719 - 773
Target Start/End: Original strand, 7911 - 7966
Alignment:
Q  719 tgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacacga 773  Q
    |||||||||| | |||||||||||||||||| |||||||| |||||||||||||||    
T  7911 tgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacga 7966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 718 - 771
Target Start/End: Complemental strand, 45805 - 45751
Alignment:
Q  718 ttgttgagatt-gtcttcaaatttgtggtctggaagaacagggaaatcgtgacac 771  Q
    ||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||    
T  45805 ttgttgagatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacac 45751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 732 - 770
Target Start/End: Original strand, 21953 - 21991
Alignment:
Q  732 ttcaaatttgtggtctggaagaacagggaaatcgtgaca 770  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggaca 21991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 726 - 775
Target Start/End: Original strand, 36332 - 36381
Alignment:
Q  726 attgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgatt 775  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  36332 attggcttcaaatttgtggtttggaagaacagagaaatcatgatacgatt 36381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 776
Target Start/End: Original strand, 43447 - 43492
Alignment:
Q  731 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattg 776  Q
    |||||||||| |||| |||||||| || ||||||||||||||||||    
T  43447 cttcaaatttatggtttggaagaatagagaaatcgtgacacgattg 43492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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