View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11069_low_25 (Length: 263)
Name: NF11069_low_25
Description: NF11069
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11069_low_25 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 37792141 - 37792389
Alignment:
| Q |
1 |
ccgtgaggggttaatgactggttagctattggcgacggcgatataccagacaaaggttgaggcgttgaagagactgatgtctggagttgtccagttggtg |
100 |
Q |
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| T |
37792141 |
ccgtgaggggttaatggctggttagctattggtgacggcgatataccagacaaaggttgaggcgttgaagagactgatgtctggagttgtccagttggtg |
37792240 |
T |
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| Q |
101 |
ttggttggcttaaagaaactggaaatgaaagtgaagcatttgttggtgctgacaaattctgtgcacgtattacagaaggatttcttggtggcccaacttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37792241 |
ttggttggcttaaagaaactggaaatgaaagtgaagcatttgttggtgctgacaaattctgtgcacgtattacagaaggatttcttggtggcccaacttg |
37792340 |
T |
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| Q |
201 |
accaaaaggacttgtttgaggccattgtgagtgctgtaagatttgtgtc |
249 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
37792341 |
accaaaaggatttgtttgaggccattgtgagtgctgtaagatttgtgtc |
37792389 |
T |
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