View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1106_low_9 (Length: 260)

Name: NF1106_low_9
Description: NF1106
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1106_low_9
NF1106_low_9
[»] chr4 (38 HSPs)
chr4 (26-125)||(22636913-22637012)
chr4 (32-125)||(44053314-44053407)
chr4 (32-127)||(12903230-12903325)
chr4 (32-127)||(16239533-16239628)
chr4 (32-115)||(3097117-3097200)
chr4 (32-127)||(7089351-7089446)
chr4 (26-117)||(20156841-20156932)
chr4 (32-115)||(15552298-15552382)
chr4 (26-125)||(3332297-3332396)
chr4 (26-125)||(24029220-24029319)
chr4 (33-113)||(14052869-14052949)
chr4 (26-117)||(15091376-15091467)
chr4 (32-115)||(17053516-17053599)
chr4 (26-125)||(22633756-22633855)
chr4 (44-117)||(12774495-12774569)
chr4 (44-117)||(44102706-44102780)
chr4 (32-117)||(16377073-16377158)
chr4 (33-117)||(44928474-44928558)
chr4 (44-117)||(6190930-6191004)
chr4 (33-127)||(16597131-16597225)
chr4 (44-117)||(21815182-21815256)
chr4 (43-117)||(39705839-39705913)
chr4 (44-117)||(43198139-43198212)
chr4 (81-125)||(7799210-7799254)
chr4 (32-95)||(14039134-14039197)
chr4 (84-127)||(23374074-23374117)
chr4 (44-117)||(21818275-21818349)
chr4 (44-115)||(44676126-44676198)
chr4 (76-115)||(10314244-10314283)
chr4 (26-71)||(7799176-7799222)
chr4 (85-115)||(13570048-13570078)
chr4 (85-115)||(23844015-23844045)
chr4 (26-115)||(46639925-46640014)
chr4 (82-115)||(8846889-8846922)
chr4 (44-117)||(13845036-13845109)
chr4 (74-115)||(53081652-53081693)
chr4 (75-115)||(12287686-12287726)
chr4 (79-115)||(15121356-15121392)
[»] chr1 (28 HSPs)
chr1 (26-125)||(50209757-50209856)
chr1 (32-127)||(22355726-22355821)
chr1 (26-117)||(22354123-22354214)
chr1 (32-127)||(27250281-27250376)
chr1 (26-125)||(21301081-21301180)
chr1 (33-116)||(433493-433576)
chr1 (29-127)||(21027151-21027249)
chr1 (26-117)||(22532748-22532839)
chr1 (26-117)||(34510259-34510350)
chr1 (29-127)||(20846771-20846869)
chr1 (29-125)||(20135669-20135766)
chr1 (32-115)||(38800955-38801038)
chr1 (31-121)||(20919085-20919175)
chr1 (44-125)||(20228364-20228445)
chr1 (32-95)||(22357444-22357507)
chr1 (32-116)||(20091026-20091110)
chr1 (44-117)||(22921418-22921491)
chr1 (44-115)||(33681506-33681578)
chr1 (81-115)||(21754577-21754611)
chr1 (32-121)||(22468243-22468333)
chr1 (44-125)||(33798003-33798084)
chr1 (44-117)||(43697857-43697930)
chr1 (44-114)||(20248774-20248845)
chr1 (78-117)||(35260629-35260668)
chr1 (43-117)||(20637347-20637421)
chr1 (75-116)||(26065520-26065561)
chr1 (86-115)||(42864764-42864793)
chr1 (47-95)||(35981260-35981308)
[»] chr8 (37 HSPs)
chr8 (32-125)||(18817953-18818046)
chr8 (26-125)||(18878780-18878879)
chr8 (26-125)||(20536687-20536786)
chr8 (26-125)||(19800970-19801069)
chr8 (26-125)||(23406860-23406959)
chr8 (26-117)||(21923479-21923570)
chr8 (32-115)||(5865830-5865913)
chr8 (26-121)||(16091888-16091983)
chr8 (32-115)||(21249866-21249949)
chr8 (26-117)||(28648595-28648686)
chr8 (32-115)||(45130584-45130667)
chr8 (29-111)||(17141395-17141477)
chr8 (32-115)||(21255704-21255787)
chr8 (26-117)||(22875544-22875635)
chr8 (32-115)||(31971729-31971812)
chr8 (44-115)||(41598681-41598752)
chr8 (44-125)||(7373246-7373328)
chr8 (32-106)||(16199220-16199294)
chr8 (44-117)||(21860063-21860136)
chr8 (26-117)||(6759736-6759827)
chr8 (32-115)||(21918563-21918646)
chr8 (26-117)||(22627214-22627305)
chr8 (32-125)||(23649038-23649131)
chr8 (32-115)||(21389005-21389089)
chr8 (44-117)||(21286718-21286791)
chr8 (29-104)||(21491474-21491549)
chr8 (32-115)||(21395529-21395613)
chr8 (32-115)||(21790022-21790106)
chr8 (44-115)||(23760392-23760464)
chr8 (43-121)||(6520864-6520942)
chr8 (74-115)||(22526099-22526140)
chr8 (44-115)||(26355250-26355322)
chr8 (42-115)||(37115978-37116051)
chr8 (74-115)||(17438982-17439023)
chr8 (74-115)||(22365266-22365307)
chr8 (47-95)||(5610211-5610259)
chr8 (44-115)||(21674202-21674274)
[»] chr3 (54 HSPs)
chr3 (26-127)||(13442731-13442832)
chr3 (26-125)||(184318-184417)
chr3 (32-125)||(17499824-17499917)
chr3 (29-122)||(20697993-20698086)
chr3 (26-117)||(26687366-26687457)
chr3 (27-125)||(17488337-17488435)
chr3 (26-125)||(11424306-11424405)
chr3 (26-117)||(17247837-17247928)
chr3 (32-125)||(43842663-43842756)
chr3 (32-127)||(13209869-13209964)
chr3 (32-115)||(14179807-14179890)
chr3 (26-117)||(14666084-14666175)
chr3 (26-117)||(14735597-14735688)
chr3 (26-117)||(25475936-25476027)
chr3 (26-117)||(53070249-53070341)
chr3 (26-117)||(18439013-18439104)
chr3 (26-117)||(23082912-23083003)
chr3 (26-124)||(12851908-12852006)
chr3 (26-117)||(14973333-14973424)
chr3 (32-125)||(30030313-30030406)
chr3 (32-115)||(16809870-16809953)
chr3 (44-121)||(12933856-12933934)
chr3 (44-115)||(9513407-9513479)
chr3 (44-115)||(9521382-9521454)
chr3 (53-117)||(17247084-17247148)
chr3 (26-114)||(40213275-40213363)
chr3 (44-115)||(4588368-4588439)
chr3 (44-115)||(42386908-42386979)
chr3 (44-115)||(1644235-1644307)
chr3 (29-125)||(12399677-12399772)
chr3 (44-117)||(16104277-16104351)
chr3 (26-115)||(14576386-14576475)
chr3 (26-91)||(14669239-14669304)
chr3 (45-121)||(14234988-14235064)
chr3 (57-117)||(14669367-14669427)
chr3 (32-115)||(15877381-15877465)
chr3 (28-115)||(14573069-14573156)
chr3 (45-120)||(15471422-15471497)
chr3 (35-121)||(23408916-23409003)
chr3 (44-114)||(49389197-49389268)
chr3 (44-115)||(49667636-49667708)
chr3 (26-115)||(12340231-12340321)
chr3 (26-115)||(21837987-21838076)
chr3 (42-114)||(22109830-22109903)
chr3 (44-117)||(52523279-52523351)
chr3 (44-115)||(12171669-12171741)
chr3 (44-115)||(16097827-16097899)
chr3 (44-115)||(17524727-17524799)
chr3 (64-115)||(32308186-32308237)
chr3 (26-115)||(43927667-43927756)
chr3 (86-115)||(321567-321596)
chr3 (163-211)||(379353-379404)
chr3 (44-117)||(2050753-2050825)
chr3 (47-95)||(22791798-22791846)
[»] chr7 (33 HSPs)
chr7 (26-125)||(12699311-12699410)
chr7 (32-125)||(9509674-9509767)
chr7 (26-117)||(38227959-38228050)
chr7 (26-125)||(39267189-39267288)
chr7 (26-125)||(9751093-9751192)
chr7 (163-249)||(10866051-10866135)
chr7 (32-117)||(3563915-3564000)
chr7 (29-124)||(26212467-26212562)
chr7 (32-115)||(27847397-27847480)
chr7 (32-127)||(11995599-11995694)
chr7 (32-127)||(15754428-15754523)
chr7 (32-115)||(34201268-34201351)
chr7 (32-125)||(18302663-18302756)
chr7 (32-127)||(40443862-40443957)
chr7 (44-116)||(12756268-12756341)
chr7 (45-114)||(15143590-15143659)
chr7 (44-115)||(810681-810753)
chr7 (44-117)||(16219267-16219340)
chr7 (32-115)||(19649037-19649121)
chr7 (44-115)||(44117001-44117073)
chr7 (26-112)||(21064717-21064804)
chr7 (43-117)||(47832304-47832378)
chr7 (29-114)||(16385812-16385897)
chr7 (76-115)||(9703772-9703811)
chr7 (29-72)||(28504897-28504940)
chr7 (76-117)||(9389267-9389308)
chr7 (44-115)||(68243-68315)
chr7 (44-115)||(11880747-11880819)
chr7 (26-69)||(2831905-2831948)
chr7 (29-115)||(24054948-24055035)
chr7 (76-117)||(17061532-17061573)
chr7 (44-115)||(18006138-18006210)
chr7 (44-115)||(44014671-44014743)
[»] chr6 (31 HSPs)
chr6 (26-125)||(22779770-22779869)
chr6 (26-125)||(17287339-17287438)
chr6 (26-125)||(27415497-27415596)
chr6 (32-127)||(20637835-20637930)
chr6 (26-117)||(28496024-28496115)
chr6 (26-117)||(29808434-29808525)
chr6 (32-127)||(1561788-1561883)
chr6 (32-115)||(16920197-16920280)
chr6 (26-125)||(21939862-21939961)
chr6 (44-125)||(1645175-1645256)
chr6 (26-117)||(18409378-18409469)
chr6 (44-117)||(18457211-18457285)
chr6 (26-117)||(19303092-19303183)
chr6 (29-115)||(22439281-22439368)
chr6 (44-117)||(22080287-22080361)
chr6 (44-117)||(25628906-25628979)
chr6 (32-115)||(19863462-19863546)
chr6 (32-115)||(22831976-22832060)
chr6 (26-120)||(25602932-25603027)
chr6 (32-117)||(15893981-15894066)
chr6 (44-117)||(23019904-23019977)
chr6 (44-117)||(25956172-25956245)
chr6 (32-71)||(22334479-22334518)
chr6 (33-115)||(31154950-31155033)
chr6 (29-114)||(25641737-25641823)
chr6 (84-117)||(15539816-15539849)
chr6 (74-115)||(18230771-18230812)
chr6 (74-115)||(18231153-18231194)
chr6 (74-115)||(20224546-20224587)
chr6 (74-115)||(22118530-22118571)
chr6 (81-117)||(20594286-20594322)
[»] scaffold0193 (1 HSPs)
scaffold0193 (26-127)||(13679-13780)
[»] scaffold1842 (1 HSPs)
scaffold1842 (32-128)||(600-696)
[»] scaffold0011 (2 HSPs)
scaffold0011 (32-128)||(167530-167626)
scaffold0011 (26-125)||(52391-52490)
[»] scaffold0647 (1 HSPs)
scaffold0647 (32-127)||(5662-5757)
[»] scaffold0305 (1 HSPs)
scaffold0305 (26-125)||(20882-20981)
[»] scaffold0080 (1 HSPs)
scaffold0080 (26-117)||(40390-40481)
[»] scaffold0016 (1 HSPs)
scaffold0016 (26-125)||(2330-2429)
[»] scaffold0003 (2 HSPs)
scaffold0003 (26-121)||(339498-339593)
scaffold0003 (26-125)||(71765-71864)
[»] chr5 (30 HSPs)
chr5 (26-125)||(23390039-23390138)
chr5 (26-125)||(25422011-25422110)
chr5 (26-117)||(1096946-1097037)
chr5 (26-117)||(20910363-20910454)
chr5 (26-125)||(22119736-22119835)
chr5 (26-117)||(24494047-24494138)
chr5 (26-115)||(21985700-21985789)
chr5 (26-125)||(25431873-25431972)
chr5 (26-127)||(22075487-22075588)
chr5 (29-125)||(19660380-19660476)
chr5 (26-113)||(9078431-9078518)
chr5 (26-125)||(21871114-21871213)
chr5 (26-125)||(21875394-21875493)
chr5 (26-113)||(24529700-24529787)
chr5 (44-117)||(11580795-11580869)
chr5 (32-115)||(22106937-22107020)
chr5 (44-117)||(29916625-29916699)
chr5 (44-125)||(21498560-21498641)
chr5 (44-117)||(21329046-21329119)
chr5 (44-115)||(23201863-23201935)
chr5 (86-121)||(8286422-8286457)
chr5 (76-126)||(22144578-22144628)
chr5 (32-69)||(8286452-8286489)
chr5 (32-125)||(24766885-24766973)
chr5 (44-117)||(26011585-26011658)
chr5 (76-117)||(36154400-36154441)
chr5 (44-115)||(22959085-22959157)
chr5 (85-115)||(14079684-14079714)
chr5 (47-95)||(21741116-21741164)
chr5 (44-115)||(31342597-31342669)
[»] chr2 (27 HSPs)
chr2 (32-127)||(23653951-23654046)
chr2 (32-127)||(23286335-23286430)
chr2 (34-125)||(23060817-23060908)
chr2 (26-117)||(23660501-23660592)
chr2 (26-125)||(27754054-27754153)
chr2 (32-113)||(28291857-28291938)
chr2 (26-125)||(23076919-23077016)
chr2 (26-113)||(298369-298457)
chr2 (32-115)||(20309579-20309662)
chr2 (44-117)||(32451479-32451553)
chr2 (26-117)||(22337594-22337685)
chr2 (26-125)||(22730776-22730875)
chr2 (32-115)||(37680-37763)
chr2 (26-113)||(22737735-22737822)
chr2 (44-115)||(40621762-40621833)
chr2 (33-115)||(22740513-22740596)
chr2 (43-117)||(7679792-7679866)
chr2 (44-115)||(22133769-22133841)
chr2 (33-115)||(22758268-22758351)
chr2 (44-123)||(24658134-24658213)
chr2 (56-114)||(23038541-23038599)
chr2 (32-113)||(23100785-23100867)
chr2 (75-116)||(20519670-20519711)
chr2 (85-114)||(22798680-22798709)
chr2 (46-115)||(25176341-25176410)
chr2 (81-117)||(22412612-22412648)
chr2 (57-117)||(23705830-23705890)
[»] scaffold0056 (2 HSPs)
scaffold0056 (32-122)||(16761-16851)
scaffold0056 (29-125)||(78905-79001)
[»] scaffold0292 (3 HSPs)
scaffold0292 (44-125)||(839-920)
scaffold0292 (85-125)||(3987-4027)
scaffold0292 (26-62)||(3949-3985)
[»] scaffold0540 (1 HSPs)
scaffold0540 (26-125)||(556-655)
[»] scaffold0021 (3 HSPs)
scaffold0021 (26-125)||(125061-125160)
scaffold0021 (32-115)||(175249-175333)
scaffold0021 (44-115)||(63058-63130)
[»] scaffold0031 (2 HSPs)
scaffold0031 (27-125)||(19969-20067)
scaffold0031 (29-115)||(65346-65433)
[»] scaffold0352 (1 HSPs)
scaffold0352 (32-117)||(17559-17644)
[»] scaffold0122 (2 HSPs)
scaffold0122 (32-125)||(25608-25701)
scaffold0122 (26-114)||(33048-33136)
[»] scaffold0413 (1 HSPs)
scaffold0413 (34-122)||(15161-15249)
[»] scaffold0088 (1 HSPs)
scaffold0088 (29-121)||(21372-21464)
[»] scaffold2044 (1 HSPs)
scaffold2044 (26-125)||(999-1098)
[»] scaffold0839 (1 HSPs)
scaffold0839 (26-125)||(1621-1720)
[»] scaffold0266 (1 HSPs)
scaffold0266 (26-117)||(18509-18600)
[»] scaffold0175 (2 HSPs)
scaffold0175 (26-125)||(13571-13670)
scaffold0175 (32-115)||(34605-34688)
[»] scaffold0124 (1 HSPs)
scaffold0124 (26-125)||(24193-24292)
[»] scaffold0389 (1 HSPs)
scaffold0389 (32-126)||(13150-13244)
[»] scaffold0358 (2 HSPs)
scaffold0358 (32-114)||(410-492)
scaffold0358 (32-114)||(5186-5268)
[»] scaffold0718 (1 HSPs)
scaffold0718 (32-115)||(4695-4778)
[»] scaffold0627 (1 HSPs)
scaffold0627 (26-117)||(383-474)
[»] scaffold0351 (2 HSPs)
scaffold0351 (32-115)||(16753-16836)
scaffold0351 (85-115)||(16881-16911)
[»] scaffold0228 (3 HSPs)
scaffold0228 (26-121)||(4987-5082)
scaffold0228 (26-121)||(12569-12664)
scaffold0228 (26-121)||(22521-22616)
[»] scaffold0084 (1 HSPs)
scaffold0084 (26-121)||(10637-10732)
[»] scaffold0046 (1 HSPs)
scaffold0046 (29-127)||(14959-15057)
[»] scaffold0247 (1 HSPs)
scaffold0247 (32-125)||(6371-6464)
[»] scaffold0026 (2 HSPs)
scaffold0026 (32-125)||(39474-39567)
scaffold0026 (26-113)||(40335-40422)
[»] scaffold0151 (1 HSPs)
scaffold0151 (26-114)||(10623-10711)
[»] scaffold0042 (1 HSPs)
scaffold0042 (26-114)||(23856-23944)
[»] scaffold0490 (1 HSPs)
scaffold0490 (32-127)||(2426-2521)
[»] scaffold0456 (1 HSPs)
scaffold0456 (32-115)||(9990-10073)
[»] scaffold0395 (2 HSPs)
scaffold0395 (26-117)||(513-604)
scaffold0395 (26-115)||(8044-8134)
[»] scaffold0347 (1 HSPs)
scaffold0347 (26-125)||(506-605)
[»] scaffold0261 (1 HSPs)
scaffold0261 (29-127)||(16140-16238)
[»] scaffold0070 (1 HSPs)
scaffold0070 (27-117)||(5003-5093)
[»] scaffold1992 (1 HSPs)
scaffold1992 (44-127)||(289-373)
[»] scaffold0639 (1 HSPs)
scaffold0639 (26-94)||(8954-9022)
[»] scaffold0876 (1 HSPs)
scaffold0876 (26-117)||(2636-2727)
[»] scaffold0598 (1 HSPs)
scaffold0598 (32-115)||(616-699)
[»] scaffold0121 (1 HSPs)
scaffold0121 (26-125)||(8076-8175)
[»] scaffold0100 (1 HSPs)
scaffold0100 (26-117)||(20591-20682)
[»] scaffold0064 (1 HSPs)
scaffold0064 (32-115)||(47460-47543)
[»] scaffold0037 (1 HSPs)
scaffold0037 (26-113)||(79887-79974)
[»] scaffold0427 (1 HSPs)
scaffold0427 (32-114)||(13969-14051)
[»] scaffold0364 (1 HSPs)
scaffold0364 (44-117)||(17171-17244)
[»] scaffold0120 (3 HSPs)
scaffold0120 (26-122)||(46404-46500)
scaffold0120 (26-117)||(32510-32601)
scaffold0120 (32-117)||(16571-16656)
[»] scaffold0423 (1 HSPs)
scaffold0423 (32-115)||(10825-10908)
[»] scaffold0114 (2 HSPs)
scaffold0114 (32-115)||(15029-15112)
scaffold0114 (32-115)||(32829-32912)
[»] scaffold0107 (1 HSPs)
scaffold0107 (26-117)||(14981-15072)
[»] scaffold0161 (1 HSPs)
scaffold0161 (29-127)||(1986-2084)
[»] scaffold0142 (1 HSPs)
scaffold0142 (44-117)||(17277-17351)
[»] scaffold0346 (1 HSPs)
scaffold0346 (29-125)||(17267-17363)
[»] scaffold0221 (1 HSPs)
scaffold0221 (26-117)||(12360-12451)
[»] scaffold0192 (1 HSPs)
scaffold0192 (26-125)||(10389-10488)
[»] scaffold0113 (1 HSPs)
scaffold0113 (32-127)||(32538-32633)
[»] scaffold0628 (1 HSPs)
scaffold0628 (44-118)||(2353-2427)
[»] scaffold0403 (1 HSPs)
scaffold0403 (29-127)||(5319-5417)
[»] scaffold0218 (2 HSPs)
scaffold0218 (29-127)||(28821-28919)
scaffold0218 (48-117)||(7572-7641)
[»] scaffold0145 (1 HSPs)
scaffold0145 (32-128)||(39244-39330)
[»] scaffold0211 (1 HSPs)
scaffold0211 (44-115)||(28361-28433)
[»] scaffold0106 (3 HSPs)
scaffold0106 (32-115)||(1760-1844)
scaffold0106 (32-115)||(7737-7821)
scaffold0106 (32-112)||(16132-16213)
[»] scaffold1137 (1 HSPs)
scaffold1137 (44-115)||(1854-1925)
[»] scaffold0217 (1 HSPs)
scaffold0217 (26-117)||(16150-16241)
[»] scaffold0810 (1 HSPs)
scaffold0810 (44-117)||(3429-3503)
[»] scaffold0555 (2 HSPs)
scaffold0555 (32-114)||(1064-1146)
scaffold0555 (44-127)||(10108-10192)
[»] scaffold0503 (1 HSPs)
scaffold0503 (44-117)||(12425-12499)
[»] scaffold0059 (1 HSPs)
scaffold0059 (63-125)||(19308-19370)
[»] scaffold0309 (1 HSPs)
scaffold0309 (32-117)||(7084-7168)
[»] scaffold0207 (1 HSPs)
scaffold0207 (44-115)||(2196-2268)
[»] scaffold0621 (1 HSPs)
scaffold0621 (44-113)||(7033-7103)
[»] scaffold0167 (1 HSPs)
scaffold0167 (55-125)||(35935-36005)
[»] scaffold0034 (2 HSPs)
scaffold0034 (44-113)||(51438-51508)
scaffold0034 (44-117)||(33033-33105)
[»] scaffold0028 (1 HSPs)
scaffold0028 (61-115)||(1-55)
[»] scaffold0023 (1 HSPs)
scaffold0023 (44-117)||(101891-101965)
[»] scaffold1257 (1 HSPs)
scaffold1257 (44-117)||(1850-1923)
[»] scaffold0004 (1 HSPs)
scaffold0004 (31-115)||(70277-70362)
[»] scaffold0476 (1 HSPs)
scaffold0476 (43-115)||(8297-8369)
[»] scaffold0138 (1 HSPs)
scaffold0138 (57-117)||(13450-13510)
[»] scaffold0556 (2 HSPs)
scaffold0556 (44-113)||(7308-7378)
scaffold0556 (44-117)||(8513-8586)
[»] scaffold0507 (1 HSPs)
scaffold0507 (47-117)||(7608-7678)
[»] scaffold0102 (1 HSPs)
scaffold0102 (44-117)||(19763-19837)
[»] scaffold0078 (1 HSPs)
scaffold0078 (47-117)||(11028-11098)
[»] scaffold0001 (1 HSPs)
scaffold0001 (44-121)||(161182-161260)
[»] scaffold0166 (1 HSPs)
scaffold0166 (32-125)||(9382-9470)
[»] scaffold0022 (1 HSPs)
scaffold0022 (74-115)||(80863-80904)
[»] scaffold0017 (2 HSPs)
scaffold0017 (28-117)||(190833-190922)
scaffold0017 (28-117)||(192536-192625)
[»] scaffold0010 (1 HSPs)
scaffold0010 (44-108)||(130404-130469)
[»] scaffold0324 (1 HSPs)
scaffold0324 (44-115)||(15895-15967)
[»] scaffold0101 (1 HSPs)
scaffold0101 (44-115)||(8510-8582)
[»] scaffold0032 (1 HSPs)
scaffold0032 (48-115)||(52068-52136)
[»] scaffold0333 (2 HSPs)
scaffold0333 (43-114)||(7109-7180)
scaffold0333 (43-114)||(14489-14560)
[»] scaffold0273 (1 HSPs)
scaffold0273 (57-120)||(8986-9049)
[»] scaffold0130 (1 HSPs)
scaffold0130 (26-65)||(29015-29054)
[»] scaffold1984 (1 HSPs)
scaffold1984 (44-114)||(627-697)
[»] scaffold1895 (1 HSPs)
scaffold1895 (26-72)||(8-54)
[»] scaffold0210 (2 HSPs)
scaffold0210 (85-115)||(21359-21389)
scaffold0210 (85-115)||(29251-29281)
[»] scaffold0131 (1 HSPs)
scaffold0131 (85-115)||(36993-37023)
[»] scaffold0075 (1 HSPs)
scaffold0075 (26-72)||(7890-7936)
[»] scaffold0040 (1 HSPs)
scaffold0040 (75-117)||(103136-103178)
[»] scaffold0020 (2 HSPs)
scaffold0020 (43-109)||(15389-15455)
scaffold0020 (55-115)||(179157-179217)
[»] scaffold0530 (1 HSPs)
scaffold0530 (43-120)||(576-653)
[»] scaffold0357 (1 HSPs)
scaffold0357 (42-113)||(3264-3335)
[»] scaffold0216 (1 HSPs)
scaffold0216 (44-115)||(16674-16746)
[»] scaffold0174 (1 HSPs)
scaffold0174 (44-115)||(18006-18078)
[»] scaffold0149 (2 HSPs)
scaffold0149 (44-115)||(4213-4285)
scaffold0149 (44-115)||(8644-8716)


Alignment Details
Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 22636913 - 22637012
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  22636913 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggcggggaaaggtt 22637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 44053314 - 44053407
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  44053314 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 44053407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 12903230 - 12903325
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  12903230 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgatcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 12903325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 16239628 - 16239533
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||||||||||    
T  16239628 aaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 16239533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 3097117 - 3097200
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  3097117 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 3097200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 7089351 - 7089446
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  7089351 aaatcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcgaagcggggaaaagttac 7089446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 20156932 - 20156841
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||||||||||||||||||||||||||    
T  20156932 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 20156841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 15552298 - 15552382
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttc-ctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||||||||||||||||||||||  |||| | |||||||||||||||||||||||||||||||||||    
T  15552298 aaatcttgcatgctctctggtcaagctcgctaggcgagttcagtctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 15552382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 3332297 - 3332396
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||| |||||||||| ||||||||||  || || ||||||||||||||| ||||||||||||||||||| |||||||||    
T  3332297 atcacgaaatcttgcatgctctctgatcaagctcgcgaggcgagttcaactactcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 3332396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 24029220 - 24029319
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||| || ||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  24029220 atcacgaaatcttgcatgctctctgatcgagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 24029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 14052949 - 14052869
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    |||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||||    
T  14052949 aatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgcgagg 14052869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 15091376 - 15091467
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||   ||||| |||||||||||||    
T  15091376 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcacctcgcgaggcggg 15091467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 17053516 - 17053599
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||| ||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  17053516 aaatcttgcatgctctctagtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 17053599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 22633855 - 22633756
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||| |||||| ||||||||||  |||||  ||||||| |||||| ||||||||||||||||||| | |||||||    
T  22633855 atcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcactatggcaagctgcaacgtgcaactcgcgaggcgagaaaaggtt 22633756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 12774495 - 12774569
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||| | ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  12774495 ctctctggtcatgctcgcgatggcgagttcatctgtttgctatggcgagctgcgacgtgcaactcgcgaggcggg 12774569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 44102706 - 44102780
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||||| |||| ||||||||||||||||||||||||||||||||    
T  44102706 ctctctggtcatgctcgctatggcgagttcatctgctcgctacggcgagctgcgacgtgcaactcgcgaggcggg 44102780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 16377158 - 16377073
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||  || ||||||||||||||||||| |||||| |||||| ||||||||||||||| | || ||||||||||||||||    
T  16377158 aaatcttgcaagctatctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcggg 16377073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 44928558 - 44928474
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||  |||||| |||||||||||||||||||||| |||| |  |||||||||||||| ||||||||||||| |||||||    
T  44928558 aatcttgcaagctctctagtcaagctcgctaggcgagttcatctgttcactatggcgagctgcaacgtgcaactcgcaaggcggg 44928474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 6190930 - 6191004
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| || |||||| || ||| |||||| ||||||||||||||||||||||||||||||    
T  6190930 ctctctggtcatgctcgctatggtgagttcatcagctcgctatgacgagctgcgacgtgcaactcgcgaggcggg 6191004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 16597131 - 16597225
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||| |||||||||| ||||||||||||||||||   || | |   ||||||||||| ||||||||||||||||||||| || ||||||    
T  16597131 aatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgtcgtggcgagctgcaacgtgcaactcgcgaggcgggaaagggttac 16597225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21815256 - 21815182
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||| | ||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||    
T  21815256 ctctctggtcatgctcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtgaggcggg 21815182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Complemental strand, 39705913 - 39705839
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  39705913 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 39705839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 43198212 - 43198139
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  43198212 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 43198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 7799210 - 7799254
Alignment:
Q  81 gctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  7799210 gctatggcgagttgcgacgtgcaactcgcgaggcggggaaaggtt 7799254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 14039134 - 14039197
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 95  Q
    ||||||||||  |||||| |||||||||||||||||||||| |||||| |||||| ||||||||    
T  14039134 aaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatgccgagctgc 14039197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 23374117 - 23374074
Alignment:
Q  84 atggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  23374117 atggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 23374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21818349 - 21818275
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| | |||| | ||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||    
T  21818349 ctctctggtcatgatcgcgatggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtgaggcggg 21818275  T

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Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 44676126 - 44676198
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||  |  || | ||| |||||||||||||||||||||||||||||||    
T  44676126 ctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 44676198  T

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Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 10314244 - 10314283
Alignment:
Q  76 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  10314244 tgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 10314283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 7799176 - 7799222
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagtt 71  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||||||    
T  7799176 atcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtt 7799222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 13570048 - 13570078
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  13570048 tggcgagctgcgacgtgcaactcgcgaggcg 13570078  T

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Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 23844015 - 23844045
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  23844015 tggcgagctgcgacgtgcaactcgcgaggcg 23844045  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 46640014 - 46639925
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||  ||||| |||||||||||||| | ||||| ||  |||||| ||||||||||||||| | ||||||||| |||||||    
T  46640014 atcacaaaatcatgtttcctcactggtcaagctcgcgatggcga-ttgatctgctcgctatggcgagctgcaaggtgcaactcacgaggcg 46639925  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 82 - 115
Target Start/End: Original strand, 8846889 - 8846922
Alignment:
Q  82 ctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||| |||||||||||||||||    
T  8846889 ctatggcgagctgcgaggtgcaactcgcgaggcg 8846922  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 13845036 - 13845109
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| ||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||| ||||||||||||    
T  13845036 ctctttggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaattcgcgaggcggg 13845109  T

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Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 53081693 - 53081652
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  53081693 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 53081652  T

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Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 12287726 - 12287686
Alignment:
Q  75 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  12287726 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 12287686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 15121392 - 15121356
Alignment:
Q  79 ttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  15121392 ttgctgtggcgagctgcgacttgcaactcgcgaggcg 15121356  T

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Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 50209856 - 50209757
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  50209856 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgcgaggcggggaaaggtt 50209757  T

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Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 22355821 - 22355726
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22355821 aaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 22355726  T

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Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 22354214 - 22354123
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  22354214 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgtgacgtgcaactcgcgaggcggg 22354123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 27250376 - 27250281
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||| |||||    
T  27250376 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgagacggggaaaagttac 27250281  T

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Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 21301180 - 21301081
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  21301180 atcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcacgaggcggggaaaggtt 21301081  T

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Target: chr1; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 433493 - 433576
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 116  Q
    |||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  433493 aatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcgg 433576  T

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Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 21027151 - 21027249
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||||||||||||||||||||||    
T  21027151 acaaattcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 21027249  T

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Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 22532748 - 22532839
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||| | ||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  22532748 atcacgaaatcttgcatgctctctggtcaagctcgctcgacgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 22532839  T

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Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 34510259 - 34510350
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| ||| || | ||||||||||||| | |||||||||||||||||||    
T  34510259 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcaaggtgcaactcgcgaggcggg 34510350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 20846869 - 20846771
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||| ||| |||||||||||||||||||||||||| ||||    
T  20846869 acaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagttgcaacgtgcaactcgcgaggcggggaaagattac 20846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 20135669 - 20135766
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||| |||||| |||||||||||||||||||| ||||||||| |||||| |||||||| ||  || |||| ||||||||||||||||||||||||    
T  20135669 acaaaatattgcatgctctctggtcaagctcgctatggcgagttcatctgctcgctatggcaagtcgcaacgtacaactcgcgaggcggggaaaggtt 20135766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 38801038 - 38800955
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| ||||||||||| |||||| |||| | ||| |||||||||||||||||||||||| ||||||    
T  38801038 aaatcttgcatgctctctggtctagctcgctaggtgagttcatctgttcgctgtggcgagctgcgacgtgcaactcgtgaggcg 38800955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 121
Target Start/End: Original strand, 20919085 - 20919175
Alignment:
Q  31 aaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    |||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| |||||||||||| ||||||||||||    
T  20919085 aaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgtgaggcggggaaa 20919175  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 20228445 - 20228364
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||| ||||||||||| ||||||||||  ||||| ||||| ||||||||| ||||||||||||||||||| |||||||||    
T  20228445 ctctctagtcaagctcgcgaggcgagttcaactgctcgctatcgcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 20228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 95
Target Start/End: Complemental strand, 22357507 - 22357444
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 95  Q
    |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  22357507 aaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgc 22357444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 20091110 - 20091026
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 116  Q
    ||||||||||| ||||||||||||||||||||||||||||   ||||| ||  ||||||| ||| ||||| ||||||||||||||    
T  20091110 aaatcttgcatgctctctggtcaagctcgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgaaactcgcgaggcgg 20091026  T

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Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 22921491 - 22921418
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||| ||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  22921491 ctctctggtcacactcgctaggtgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 22921418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 33681506 - 33681578
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | | |||||||||||||||    
T  33681506 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggagcaactcgcgaggcg 33681578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 115
Target Start/End: Original strand, 21754577 - 21754611
Alignment:
Q  81 gctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||||||    
T  21754577 gctatggcgagctgcgacgtgcaactcgcgaggcg 21754611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 22468333 - 22468243
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||||| ||| ||||||| ||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||| ||||| |||||    
T  22468333 aaatcttacatgctctctgttcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcaaggcgaggaaa 22468243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 33798003 - 33798084
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||||||| |||||||      | || ||||||||||||||| |||||||||||||||| || |||||||||    
T  33798003 ctctctggtcaagctcgcgaggcgagggatattactcgctatggcgagctgcaacgtgcaactcgcgagacgaggaaaggtt 33798084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 43697857 - 43697930
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| |||||||||    
T  43697857 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcacgaggcggg 43697930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 20248774 - 20248845
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||| ||| |||| |||||||||  ||| | ||||||||||| ||||| ||||||||||||||||    
T  20248774 ctctctggtcatgcttgctatggcgagttcaactgttcgctatggcgagttgcgaggtgcaactcgcgaggc 20248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 117
Target Start/End: Complemental strand, 35260668 - 35260629
Alignment:
Q  78 cttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  35260668 cttgctatggcgagctgcaaggtgcaactcgcgaggcggg 35260629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 20637347 - 20637421
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||  |||| |||||||||   ||| || ||||||||||||||| | ||||||||| |||||||||    
T  20637347 cctctctggtcacactcggtaggcgagtgaatctactcgctatggcgagctgcaaggtgcaactctcgaggcggg 20637421  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 26065520 - 26065561
Alignment:
Q  75 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 116  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  26065520 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 26065561  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 115
Target Start/End: Complemental strand, 42864793 - 42864764
Alignment:
Q  86 ggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||||||||||||||||||||||    
T  42864793 ggcgagctgcgacgtgcaactcgcgaggcg 42864764  T

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Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 35981308 - 35981260
Alignment:
Q  47 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 95  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  35981308 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 35981260  T

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Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 18818046 - 18817953
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18818046 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 18817953  T

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Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 18878879 - 18878780
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  18878879 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgatgcggggaaaggtt 18878780  T

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Target: chr8; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 20536687 - 20536786
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||  ||||||||||||||||||||||||||||||    
T  20536687 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctatgacgtgcaactcgcgaggcggggaaaggtt 20536786  T

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Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 19801069 - 19800970
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||| |||||||||    
T  19801069 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcgaggaaaggtt 19800970  T

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Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 23406860 - 23406959
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  23406860 atcacgaaatcttgcatgctctctggtcaagctcgctaggccagttcatctgctcgttatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 23406959  T

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Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 21923570 - 21923479
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||  ||| ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||    
T  21923570 atcacaaaatctcacatgctctctggtcaagctcgctaggcgagtacgtctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 21923479  T

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Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 5865913 - 5865830
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  5865913 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 5865830  T

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Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 16091983 - 16091888
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||||| ||||||    
T  16091983 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagcttcgatgtgcaactcgcgaggctgggaaa 16091888  T

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Target: chr8; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 21249866 - 21249949
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  21249866 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 21249949  T

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Target: chr8; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 28648686 - 28648595
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  28648686 atcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 28648595  T

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Target: chr8; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 45130667 - 45130584
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||  |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  45130667 aaatcttgcatggtctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 45130584  T

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Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 17141395 - 17141477
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcga 111  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||| ||||||||||||    
T  17141395 acaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaactcgcga 17141477  T

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Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 21255704 - 21255787
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||| |||||||||||||||||    
T  21255704 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgatgtgcaactcgcgaggcg 21255787  T

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Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 22875544 - 22875635
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| |||||| | |||||||||||||||||||    
T  22875544 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcaaggtgcaactcgcgaggcggg 22875635  T

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Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 31971729 - 31971812
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  31971729 aaatcttgcatgctctctggtctagctagctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 31971812  T

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Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 41598681 - 41598752
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  41598681 ctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 41598752  T

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Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 7373246 - 7373328
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  7373246 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 7373328  T

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Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 16199294 - 16199220
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaact 106  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  16199294 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaact 16199220  T

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Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21860136 - 21860063
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||| |||||||||||||||||    
T  21860136 ctctctggtcaagctcgctaggcgagtacgtctgctcgctatggtgagctgcgacgagcaactcgcgaggcggg 21860063  T

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Target: chr8; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 6759736 - 6759827
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  |||||| |||||||| ||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  6759736 atcacgaaatcttgcaagctctctagtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcatggtgcaactcgcgaggcggg 6759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 21918646 - 21918563
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| || ||||||||| ||||||||||||||||   || | |||||||||||||||||||||||||||||||||||    
T  21918646 aaatcttgcatgctgtctggtcaatctcgctaggcgagttcaagtgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 21918563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 22627214 - 22627305
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| | |||| | |||||| ||||||   |||||||||||||||||||    
T  22627214 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatatgctcgatatggcaagctgcagggtgcaactcgcgaggcggg 22627305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 23649038 - 23649131
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||||| ||||||||||||||||||||||   |||| ||||||||||| ||| || || |||||| |||||| |||||||||    
T  23649038 aaatcttgcatgctctctagtcaagctcgctaggcgagttcagttgctcgctatggcgagttgcaacatgtaactcgggaggcgaggaaaggtt 23649131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 21389089 - 21389005
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  21389089 aaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 21389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 21286718 - 21286791
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21286718 ctctctggtcacactcgctaggcgagtggatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21286791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 21491474 - 21491549
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaa 104  Q
    |||||||||||||| |||||||||| ||||||||||||||||||   || | ||| ||||||||||| ||||||||    
T  21491474 acaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgctgtggcgagctgcaacgtgcaa 21491549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 21395613 - 21395529
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| |||||||||||||||||||||||||||    
T  21395613 aaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggcg 21395529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 21790106 - 21790022
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| |||| ||||||||||| |||||||| |||||||||   || | ||| ||| |||||||||||||||||||||||||||    
T  21790106 aaatctggcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggtgagctgcgacgtgcaactcgcgaggcg 21790022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 23760464 - 23760392
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||||| || |||| ||||||||| |||||||||| ||||||    
T  23760464 ctctctggtcatgctcgctatggcgagttcatctgctcgcgatggtgagctgcgaggtgcaactcgtgaggcg 23760392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 6520864 - 6520942
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||||| ||||  || |||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||||||    
T  6520864 cctctctagtcacacttgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcgcgaggcggggaaa 6520942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 22526099 - 22526140
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||| || ||||||||||||||||    
T  22526099 tctgcttgctatggcgagctgcaacatgcaactcgcgaggcg 22526140  T

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Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 26355322 - 26355250
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||| |||||| ||||| || ||||||||| |||| |||| |||||||||||||| ||||||||| |||||||    
T  26355322 ctctttggtcatgctcgttatggcgagttcatctgtttgccatggcgagctgcgaggtgcaactcacgaggcg 26355250  T

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Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 115
Target Start/End: Complemental strand, 37116051 - 37115978
Alignment:
Q  42 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||||    
T  37116051 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 37115978  T

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Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 17439023 - 17438982
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| || ||||||||||||||||    
T  17439023 tctgctcgctatggcgagctgcaacatgcaactcgcgaggcg 17438982  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 22365266 - 22365307
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22365266 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 22365307  T

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Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 5610259 - 5610211
Alignment:
Q  47 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 95  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  5610259 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 5610211  T

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Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 21674202 - 21674274
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| |  |  |||||||||||||  ||||||||||||||||    
T  21674202 ctctctggtcatgctcgctatggcgagttcatctgttcacgttggcgagctgcgagatgcaactcgcgaggcg 21674274  T

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Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 13442731 - 13442832
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||| |||||||||||||||    
T  13442731 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaactcgcaaggcggggaaaggtt 13442830  T
Q  126 ac 127  Q
    ||    
T  13442831 ac 13442832  T

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Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 184417 - 184318
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| |||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  184417 atcacgaaatcttgcatgttctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggtt 184318  T

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Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 17499824 - 17499917
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  17499824 aaatcttgcattctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggggaaaggtt 17499917  T

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Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 29 - 122
Target Start/End: Complemental strand, 20698086 - 20697993
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 122  Q
    |||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  20698086 acaaaatcttgcatgctctctggtcaagctcgctagacgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcgggaaaag 20697993  T

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Target: chr3; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 26687366 - 26687457
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  26687366 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgcgaggcggg 26687457  T

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Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 17488337 - 17488435
Alignment:
Q  27 tcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||| ||||||||||| |||||| |||||||| ||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  17488337 tcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 17488435  T

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Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 11424405 - 11424306
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||| ||||||||    
T  11424405 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggagaaaggtt 11424306  T

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Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 17247928 - 17247837
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  17247928 atcacgaaatcttgcaacctctctggtcaagctcgctaggagagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcggg 17247837  T

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Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 43842663 - 43842756
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||| | ||||||||||| |||||||||||||||||||    
T  43842663 aaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagttacgacgtgcaacccgcgaggcggggaaaggtt 43842756  T

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Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 13209964 - 13209869
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||||||||||||||||||||||||||   || | || |||||||||||||||||||||||||||||||||||||| |||||    
T  13209964 aaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 13209869  T

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Target: chr3; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 14179807 - 14179890
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  14179807 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 14179890  T

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Target: chr3; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 14666084 - 14666175
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  14666084 atcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgcgaggcggg 14666175  T

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Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 14735597 - 14735688
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||    
T  14735597 atcataaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtgacgtgcaactcgcgaggcggg 14735688  T

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Target: chr3; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 25476027 - 25475936
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||||| | || ||||||||||||||||    
T  25476027 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctgcaaggtacaactcgcgaggcggg 25475936  T

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Target: chr3; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 53070341 - 53070249
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  ||| |||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  53070341 atcacgaaatcttgcaagctccctggtcaagctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 53070249  T

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Target: chr3; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 18439013 - 18439104
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||   |||||||||||||||||||    
T  18439013 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctactcgctatggcgagctgctgggtgcaactcgcgaggcggg 18439104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 23083003 - 23082912
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||  ||| ||||||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||| |||||||    
T  23083003 atcacaaaatctgacatgctctctggtcaagctcgctgggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgcaaggcggg 23082912  T

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Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 12852006 - 12851908
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 124  Q
    ||||| ||||||||||| ||||| ||||||| |||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| ||||||||    
T  12852006 atcacgaaatcttgcatgctctcaggtcaagatcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggt 12851908  T

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Target: chr3; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 14973333 - 14973424
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  |||||||||||||||||||||| |||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  14973333 atcacgaaatcttgcaagctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 14973424  T

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Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 30030313 - 30030406
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||||||||||||||||||||||||||||  || || ||||||||||| ||| ||| |||||| |||||||||| |||||||    
T  30030313 aaatcttgcatgctctctggtcaagctcgctaggcgagttcagctactcgctatggcgagttgcaacgcgcaacttgcgaggcgggaaaaggtt 30030406  T

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Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 16809870 - 16809953
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| |||| |||||| ||| |||||||||||||||||| |||  | |||||||||||||||||||||||||||||||||||    
T  16809870 aaatctagcatgctctctagtctagctcgctaggcgagttcatctattcgctatggcgagctgcgacgtgcaactcgcgaggcg 16809953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 121
Target Start/End: Complemental strand, 12933934 - 12933856
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||| |||||    
T  12933934 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcgaggaaa 12933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 9513407 - 9513479
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9513407 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9513479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 9521382 - 9521454
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  9521382 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 9521454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 17247148 - 17247084
Alignment:
Q  53 caagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||||    
T  17247148 caagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcggg 17247084  T

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Target: chr3; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 40213363 - 40213275
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||| ||||||||||  |||||||||||||||| |||||||||||| |||||| ||||||||||||| | | ||| ||||||||||||    
T  40213363 atcacgaaatcttgcaagctctctggtcaagctcactaggcgagttcatctgctcgctatggcgagctacaaggtgtaactcgcgaggc 40213275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 4588439 - 4588368
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||| ||||||||||  ||||| |||||||||||||||  ||||||||||||||||||    
T  4588439 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcatcgtgcaactcgcgaggcg 4588368  T

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Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 42386908 - 42386979
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||  |||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||    
T  42386908 ctctctggtcacactcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 42386979  T

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Target: chr3; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 1644307 - 1644235
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||||  ||| | |||||||||||||||||||||||||||||||||||    
T  1644307 ctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 1644235  T

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Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 12399677 - 12399772
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||| |||| |||||||||| ||||||| ||||||||||   || || | |||||||||||||||||||||||||||| |||||||| ||||    
T  12399677 acaaaatctagcatgctctctggtctagctcgcgaggcgagttcaagtgttttccatggcgagctgcgacgtgcaactcgcga-gcggggaagggtt 12399772  T

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Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 16104277 - 16104351
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||| | || ||||||||| ||||||||||||||||||||||||    
T  16104277 ctctctggtcatgctcgctatggcgagttcatctgttcgcgatggcgagcggcgacgtgcaactcgcgaggcggg 16104351  T

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Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 14576475 - 14576386
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||     |||| ||| |||||||||||  ||||||||||| ||||||    
T  14576475 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtaggattgctcgctgtggcgagctgcatcgtgcaactcgggaggcg 14576386  T

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Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 14669239 - 14669304
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgag 91  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  14669239 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgag 14669304  T

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Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 14234988 - 14235064
Alignment:
Q  45 tctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||||||||  ||| ||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  14234988 tctctggtcacactcactaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 14235064  T

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Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 14669367 - 14669427
Alignment:
Q  57 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  || || |||||||||||||||||||||||||||||||||||||    
T  14669367 ctcgcgaggcgagttcaactactcgctatggcgagctgcgacgtgcaactcgcgaggcggg 14669427  T

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Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 15877465 - 15877381
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||| |||||||||||||||||||||||    
T  15877465 aaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagttgcgacgtgcaactcgcgaggcg 15877381  T

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Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 14573069 - 14573156
Alignment:
Q  28 cacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||||||| |||| ||||||||||||||||||||||     |||||| | |||||||||||  ||||||||| ||||||||    
T  14573069 cacaaaatcttgcatgctctttggtcaagctcgctaggcgagtaggattgcttgttgtggcgagctgcatcgtgcaacttgcgaggcg 14573156  T

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Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 15471422 - 15471497
Alignment:
Q  45 tctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 120  Q
    ||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||| ||||||||||||||||||    
T  15471422 tctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtggaactcgcgaggcggggaa 15471497  T

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Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 23408916 - 23409003
Alignment:
Q  35 tcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    |||||||| |||| |||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||||||||| |||||    
T  23408916 tcttgcatgctctttggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcgaggaaa 23409003  T

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Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Complemental strand, 49389268 - 49389197
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||||||||    
T  49389268 ctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgatgtgcaactcgcgaggc 49389197  T

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Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 49667708 - 49667636
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||| |||| |||||||||||| |||||    
T  49667708 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagttgcgtcgtgcaactcgcaaggcg 49667636  T

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Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 12340231 - 12340321
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||     |||| ||| ||||||||| |||| || |||||||||||||    
T  12340231 atcacgaaatcttgcatgctctctggtcaagctcgctatggcgagtagggttgctcgctgtggcgagctacgacatgtaactcgcgaggcg 12340321  T

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Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 21837987 - 21838076
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| | |||||||||||||||||    
T  21837987 atcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 21838076  T

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Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 22109903 - 22109830
Alignment:
Q  42 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||| ||||||| |||||||| ||||||||| |||||| ||||||||||||||| | |  |||||||||||||    
T  22109903 tcctcactggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcaaggaacaactcgcgaggc 22109830  T

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Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 52523351 - 52523279
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  52523351 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 52523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 12171741 - 12171669
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||| ||| |||||||||  ||| | || |||||||||||||| |||||||||||||||||    
T  12171741 ctctctggtcatgctcactatggcgagttcaactgttcgcaatggcgagctgcgaggtgcaactcgcgaggcg 12171669  T

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Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 16097827 - 16097899
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||| |||||| |||||||| ||||||||| || | | ||||||||||||||| | |||||||||||||||||    
T  16097827 ctctttggtcatgctcgctatggcgagttcatccgttcgctatggcgagctgcaaggtgcaactcgcgaggcg 16097899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 17524799 - 17524727
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| |||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  17524799 ctctctagtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 17524727  T

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Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 32308186 - 32308237
Alignment:
Q  64 ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  32308186 ggcgagttcatctattcgctatggcgagctgcgaggtgcaactcgcgaggcg 32308237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 43927667 - 43927756
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||  ||||| |||||||| ||||||| |||||||   |||||| |||| |||||||||| || ||||||||||||||||    
T  43927667 atcacaaaatcatgtttcctcactggtcaaactcgctatggcgagtga-tctgctcgctacggcgagctgcaacatgcaactcgcgaggcg 43927756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 86 - 115
Target Start/End: Complemental strand, 321596 - 321567
Alignment:
Q  86 ggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||||||||||||||||||||||    
T  321596 ggcgagctgcgacgtgcaactcgcgaggcg 321567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 379353 - 379404
Alignment:
Q  163 tagtgtggcttagcaagacgtttaat---aaaaagggcaagattgtcatttc 211  Q
    ||||||||||||||||||| ||||||   |||||||||||||| ||||||||    
T  379353 tagtgtggcttagcaagacttttaataaaaaaaagggcaagatggtcatttc 379404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 2050825 - 2050753
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||| ||||||||||    
T  2050825 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggg 2050753  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Original strand, 22791798 - 22791846
Alignment:
Q  47 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 95  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  22791798 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 22791846  T

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Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 12699311 - 12699410
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  12699311 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgacttcatctgcttgctatggcgagctgcgacgtgcaactcgcgaggtggggaaaggtt 12699410  T

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Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 9509674 - 9509767
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  9509674 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggcggggaaaggtt 9509767  T

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Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 38227959 - 38228050
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  38227959 atcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 38228050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 39267288 - 39267189
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  39267288 atcacaaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 39267189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 9751192 - 9751093
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||| ||||||||||||| |||||||||    
T  9751192 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgtaactcgcgaggcgaggaaaggtt 9751093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 10866135 - 10866051
Alignment:
Q  163 tagtgtggcttagcaagacgtttaataaaaagggcaagattgtcatttcctcctatatgggccacgtttcccccttttccccttcat 249  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||    
T  10866135 tagtgtggcttagcaagacttttaataaaaagggcaagattgtcattt-ttcctatatgggccacg-ttcccccttttccccttcat 10866051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 3564000 - 3563915
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  3564000 aaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 3563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 29 - 124
Target Start/End: Original strand, 26212467 - 26212562
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggt 124  Q
    |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||||||||||||||||||    
T  26212467 acaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaggt 26212562  T

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Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 27847480 - 27847397
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  27847480 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 27847397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 11995694 - 11995599
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||||||||||||||||||||||||||   || || | |||||||||||| || ||||||| ||||||||||||||||||||    
T  11995694 aaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttttccatggcgagctgcaacatgcaacttgcgaggcggggaaaggttac 11995599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 15754523 - 15754428
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| ||||||||||||||||||||||||||||| |||||    
T  15754523 aaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgcgaggcggggaaaagttac 15754428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 34201268 - 34201351
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||  | ||||||||||||||||| |||||||||||||||||    
T  34201268 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctattcgctatggcgagctgcgatgtgcaactcgcgaggcg 34201351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 18302663 - 18302756
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| ||||||||||| |||||| ||||||||||  ||||| | | ||||||||||| ||||||||||||||||||| |||||||||    
T  18302663 aaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactgctcgttgtggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 18302756  T

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Target: chr7; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 40443862 - 40443957
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| || ||||||| ||||||||||||||||||   || | ||  ||||||||||| |||||||||||||||||||||||||||||||    
T  40443862 aaatcttgcatgctttctggtctagctcgctaggcgagttcaagtgttcgccgtggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 40443957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 116
Target Start/End: Complemental strand, 12756341 - 12756268
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 116  Q
    |||||| |||| |||||||| ||||||||| |||||| || |||||||||||||||||||||||||||||||||    
T  12756341 ctctctagtcatgctcgctatggcgagttcatctgctcgcgatggcgagctgcgacgtgcaactcgcgaggcgg 12756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 15143659 - 15143590
Alignment:
Q  45 tctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||||||||| |||||||||| |||||| ||||||||||||||| | ||||| ||||||||||    
T  15143659 tctctggtcaagctcgcaaggcgagttcatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 15143590  T

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Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 810753 - 810681
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||||||||    
T  810753 ctctctggtcatgctcgctatggcgagttcatctgctcgctgtggcgagctgcgaggtgcaactcgcgaggcg 810681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 16219340 - 16219267
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  16219340 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 16219267  T

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Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 19649121 - 19649037
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||| ||||||||    
T  19649121 aaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaacttgcgaggcg 19649037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 44117001 - 44117073
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||| || ||||||||| |||||| ||||||| ||||||||| |||||||||||||||||    
T  44117001 ctctctggtcatgctcgttatggcgagttcatctgctcgctatggtgagctgcgatgtgcaactcgcgaggcg 44117073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 21064804 - 21064717
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 112  Q
    ||||||||||||||||  |||||||||||  ||||||| |||||||     |||||||||||||||||||||| ||||||||||||||    
T  21064804 atcacaaaatcttgcaagctctctggtcacactcgctacggcgagtaaacttgcttgctatggcgagctgcgaagtgcaactcgcgag 21064717  T

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Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 47832304 - 47832378
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| |  ||||||||||||||||||    
T  47832304 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaagatgcaactcgcgaggcggg 47832378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 16385897 - 16385812
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    |||||||||||||| ||||||| || ||||||||||||||||||   || | | | ||||||||||| ||||||||||||| ||||    
T  16385897 acaaaatcttgcatgctctctgatctagctcgctaggcgagttcaagtgttcgttgtggcgagctgcaacgtgcaactcgcaaggc 16385812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 9703772 - 9703811
Alignment:
Q  76 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  9703772 tgctcgctatggcgagctgcgacgtgcaactcgcgaggcg 9703811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Complemental strand, 28504940 - 28504897
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 72  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    
T  28504940 acaaaatcttgcatgctctctggtctagctcgctaggcgagttc 28504897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 9389308 - 9389267
Alignment:
Q  76 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  9389308 tgctcgctatggcgagctgcgaggtgcaactcgcgaggcggg 9389267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 68243 - 68315
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| |  |||||| ||||||||| ||||| |||||||||||    
T  68243 ctctctggtcatgctcgctatggcgagttcatctgatcactatggtgagctgcgaggtgcacctcgcgaggcg 68315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 11880747 - 11880819
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||  |  || | ||| |||||||||||||||||||||||||||||||    
T  11880747 ctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 11880819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 2831948 - 2831905
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgag 69  Q
    ||||| ||||||||||| |||||||||||||||||| |||||||    
T  2831948 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgag 2831905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 24054948 - 24055035
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||| | ||||||||| |||||||| |||| ||||    | | | | |||||||||||||||||||||||||||||||    
T  24054948 acaaaatcttgcatgcactctggtcatgctcgctatggcgtgttcagtcgttcgttgtggcgagctgcgacgtgcaactcgcgaggcg 24055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 17061573 - 17061532
Alignment:
Q  76 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||||||||||| |||||||| |||||||||    
T  17061573 tgctcgctatggcgagctgcgacatgcaactcacgaggcggg 17061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 18006138 - 18006210
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| || |||||| |||| | |||||| |||||| ||| |||||| ||||||||||    
T  18006138 ctctctggtcatgctcgctatggtgagttcatctgttcgctatgacgagcttcgaagtgcaattcgcgaggcg 18006210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 44014671 - 44014743
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||| | |  ||||| |||||||||||||||||    
T  44014671 ctctctggtcatgctcgctatggcgagttcatctgttcgctatgacaatttgcgaggtgcaactcgcgaggcg 44014743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 22779869 - 22779770
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  22779869 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 22779770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 17287438 - 17287339
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||    
T  17287438 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgtgaggcggggaaaggtt 17287339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 27415596 - 27415497
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  27415596 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 27415497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 20637930 - 20637835
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||| || |||| ||||||||||| |||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20637930 aaatcttggatgctctttggtcaagctcactaggcaagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 20637835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 28496115 - 28496024
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  28496115 atcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgcgaggcggg 28496024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 29808525 - 29808434
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||||||||||||||    
T  29808525 atcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgtgacgtgcaactcgcgaggcggg 29808434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 1561788 - 1561883
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||||||||||||||||||||||||||   || |  | |||||||| ||||||||||||||||||||||||||||| |||||    
T  1561788 aaatcttgcatgctctctggtcaagctcgctaggcgagttcaagtgttcaccatggcgagatgcgacgtgcaactcgcgaggcggggaaaagttac 1561883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 16920280 - 16920197
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||| ||| |||||||||||||||||| | || | |||||||||||||||||||||||||||||||||||    
T  16920280 aaatcttgcatgctctctagtctagctcgctaggcgagttcatttgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 16920197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 21939862 - 21939961
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| | ||||||||||||| ||| |||||||||    
T  21939862 atcacgaaatcttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaatgtgcaactcgcgaagcgaggaaaggtt 21939961  T

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Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 1645175 - 1645256
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||||||| ||||||||||  ||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  1645175 ctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgtaacgtgcaactcgcgaggcgaggaaaggtt 1645256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 18409469 - 18409378
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||||||| ||| || | |||||||||||||   |||||||||||||||||||    
T  18409469 atcacgaaatcctgcatgctctctggtcaagctcgctaggcgagttcatctactcgatatggcgagctgcagggtgcaactcgcgaggcggg 18409378  T

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Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 18457211 - 18457285
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  18457211 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgtcgtgcaactcgcgaggcggg 18457285  T

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Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 19303183 - 19303092
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  |||||||||||||||| | ||| |||||| |||||| ||||||||||||| | | ||||||||||| |||||||    
T  19303183 atcacgaaatcttgcaagctctctggtcaagctcacgaggtgagttcatctgctcgctatggcgagctccaaggtgcaactcgcaaggcggg 19303092  T

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Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 115
Target Start/End: Original strand, 22439281 - 22439368
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||| ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||| |||||||||||||    
T  22439281 acaaaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgtaactcgcgaggcg 22439368  T

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Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 22080361 - 22080287
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||||||||||| || |||||| |||| ||||||||||||||||| | |||||||||| ||||||||    
T  22080361 ctctctggtcaagctcgctatggtgagttcatctgtttgctatggcgagctgcaaggtgcaactcgtgaggcggg 22080287  T

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Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 25628979 - 25628906
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| ||||||| ||||||||| |||||| |||||| ||||||||||||||| | || ||||||||||||||||    
T  25628979 ctctttggtcaaactcgctaggtgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcggg 25628906  T

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Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 19863462 - 19863546
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  19863462 aaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 19863546  T

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Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 22831976 - 22832060
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||||| |||| ||| || ||||||   || | |||||||||||||||||||||||||||||||||||    
T  22831976 aaatcttgcatgctctctggtcatgctcactatggtgagttcagttgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 22832060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 120
Target Start/End: Complemental strand, 25603027 - 25602932
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 120  Q
    ||||| ||||||||||| |||||||||||||||||||| || |||||   |||||  || ||||||||||| || |||||||||||||||| ||||    
T  25603027 atcacgaaatcttgcatgctctctggtcaagctcgctatggtgagttaagctgctctctgtggcgagctgcaacatgcaactcgcgaggcgaggaa 25602932  T

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Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 15894066 - 15893981
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||| |||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||| |||||||||||||    
T  15894066 aaatcttgcatgctctctagtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcagctcgcgaggcggg 15893981  T

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Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 23019904 - 23019977
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||   ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  23019904 ctctctggtcgcactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23019977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 25956245 - 25956172
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||| |||||||||||||    
T  25956245 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcgaggcggg 25956172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 71
Target Start/End: Complemental strand, 22334518 - 22334479
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagtt 71  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  22334518 aaatcttgcatgctctctggtcaagctcgctaggcgagtt 22334479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 31155033 - 31154950
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||| |||||||||| ||||||||| |||||||   | |||| ||| |||||||||||  || |||||||||||||||    
T  31155033 aatcttgcatgctctctggtctagctcgctatggcgagtatgtttgctcgctgtggcgagctgcatcgcgcaactcgcgaggcg 31154950  T

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Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 25641823 - 25641737
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    |||||||||| ||| ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||| ||||||| |||||    
T  25641823 acaaaatcttacatgctctctggtcatgctcgttatggcgagttcagttgttcgctgtggcgagctgcgacgtccaactcgtgaggc 25641737  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 84 - 117
Target Start/End: Original strand, 15539816 - 15539849
Alignment:
Q  84 atggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||||| |||||||||||||||||||    
T  15539816 atggcgagctgcgaggtgcaactcgcgaggcggg 15539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 18230771 - 18230812
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18230771 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18230812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 18231153 - 18231194
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  18231153 tctgctcgctatggcgagctgcaaggtgcaactcgcgaggcg 18231194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 20224546 - 20224587
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  20224546 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 20224587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 22118530 - 22118571
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||||||||||||||| | |||||||||||||||||    
T  22118530 tctgctcgctatggcgagctgcaaagtgcaactcgcgaggcg 22118571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Original strand, 20594286 - 20594322
Alignment:
Q  81 gctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||| | |||||||||||||||||||    
T  20594286 gctatggcgagctgcaaggtgcaactcgcgaggcggg 20594322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 13679 - 13780
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| |||||||||||||    
T  13679 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcgacgtgcaactcgcgatgcggggaaaggtt 13778  T
Q  126 ac 127  Q
    ||    
T  13779 ac 13780  T

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Target: scaffold1842 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 696 - 600
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttacc 128  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  696 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcgaggcggggaaaagttacc 600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 167626 - 167530
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttacc 128  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  167626 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcgaggcggggaaaagttacc 167530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 52391 - 52490
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| || |||||||||||||||    
T  52391 atcaaaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacatgcaacttgcaaggcggggaaaggtt 52490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 5757 - 5662
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| ||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  5757 aaatcttgcatgctctctggtcaagcttgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaagtttac 5662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 20882 - 20981
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20882 atcacgaaatcttacatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaagcggggaaaggtt 20981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 40390 - 40481
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  40390 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 40481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 2330 - 2429
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| |||||||| || |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2330 atcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 2429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 339593 - 339498
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  339593 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 339498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 71765 - 71864
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  71765 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 71864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 3e-35; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 23390138 - 23390039
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| |||||||| || |||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23390138 atcacgaaatcttggatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 23390039  T

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Target: chr5; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 25422011 - 25422110
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| | ||| || ||||||||||||||||| |||||||||||||||||||||||||||    
T  25422011 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctactcgctatggcgagctgcgatgtgcaactcgcgaggcggggaaaggtt 25422110  T

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Target: chr5; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 1096946 - 1097037
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||||||    
T  1096946 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtttatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 1097037  T

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Target: chr5; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 20910454 - 20910363
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||    
T  20910454 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcggg 20910363  T

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Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 22119835 - 22119736
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||| |||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  22119835 atcacaaaattttgcatgctctctggtcaagcttgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 22119736  T

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Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 24494047 - 24494138
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||||||||| | |||||||||||||||||||    
T  24494047 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcagctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 24494138  T

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Target: chr5; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 21985789 - 21985700
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||| |||||||    
T  21985789 atcacgaaatcttgcatgctctctgttcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcagctctcgaggcg 21985700  T

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Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 25431873 - 25431972
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||| | ||| || ||||||| |||||||||||||||||||||||||| || |||||||    
T  25431873 atcacgaaatcttgcacgctctctggtcaagctcgctaggcgagtacatctactcgctatggagagctgcgacgtgcaactcgcgaggcaggaaaaggtt 25431972  T

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Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 22075487 - 22075588
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||   || | || |||||||||||| ||||||||||||| |||||||||||||||    
T  22075487 atcacgaaatcttgcatgctctctggtcaagctcactaggcgagttcaagtgttcgccatggcgagctgcaacgtgcaactcgcaaggcggggaaaggtt 22075586  T
Q  126 ac 127  Q
    ||    
T  22075587 ac 22075588  T

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Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 19660476 - 19660380
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||| |||||||||| ||||||||||||||||||   || | || ||||||||||||||||||||||||| ||||||||||| ||||    
T  19660476 acaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgttcgccatggcgagctgcgacgtgcaactcgtgaggcggggaagggtt 19660380  T

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Target: chr5; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 9078431 - 9078518
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||||||| | | |||||||||||||||    
T  9078431 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgttatggcgagctacaaggtgcaactcgcgagg 9078518  T

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Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 21871213 - 21871114
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||||||||| || ||||||    
T  21871213 atcacgaaatcttgcatgctctctagtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgcgaggcgaggtaaggtt 21871114  T

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Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 21875493 - 21875394
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||| ||||||||||| || ||||||    
T  21875493 atcacgaaatcttgcatgctctcttgtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcacctcgcgaggcgaggtaaggtt 21875394  T

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Target: chr5; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 24529700 - 24529787
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| | |||||| | |||||||||||||   |||||||||||||||    
T  24529700 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgttatggcgagctgcagggtgcaactcgcgagg 24529787  T

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Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 11580869 - 11580795
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||    
T  11580869 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggcggg 11580795  T

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Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 22107020 - 22106937
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||| |||||| |||||||||| |||||||||||||||||| |||| | | | ||||||||||||||||||| |||||||||||    
T  22107020 aaattttgcatgctctctggtctagctcgctaggcgagttcatctgttcgttgtggcgagctgcgacgtgcacctcgcgaggcg 22106937  T

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Target: chr5; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 29916625 - 29916699
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||| |||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  29916625 ctctatggtcatgctcgctatggcgagttcatttgctcgctatggcgagctgcgacgtgcaactcgcgaggcggg 29916699  T

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Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 21498641 - 21498560
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||| ||||  |||||||||||||||  |||||| ||||||||||||||| | |||||||||||||||| || |||||||    
T  21498641 ctctctagtcacactcgctaggcgagttaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcaggtaaaggtt 21498560  T

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Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 21329119 - 21329046
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| ||||||  ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  21329119 ctctatggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 21329046  T

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Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 23201863 - 23201935
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  23201863 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 23201935  T

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Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 86 - 121
Target Start/End: Complemental strand, 8286457 - 8286422
Alignment:
Q  86 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||||||||||||||||||||||||||||||||||    
T  8286457 ggcgagctgcgacgtgcaactcgcgaggcggggaaa 8286422  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 126
Target Start/End: Original strand, 22144578 - 22144628
Alignment:
Q  76 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 126  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||| ||||    
T  22144578 tgcttgctatggcgagctgcaaggtgcaactcgcgaggcgggtaaaagtta 22144628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 8286489 - 8286452
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgag 69  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  8286489 aaatcttgcatgctctctggtcaagctcgctaggcgag 8286452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 24766973 - 24766885
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| ||||||||||| |||||||||    
T  24766973 aaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcgcgaggcgaggaaaggtt 24766885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 26011658 - 26011585
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||| ||||||||    
T  26011658 ctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgtgaggcggg 26011585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 117
Target Start/End: Complemental strand, 36154441 - 36154400
Alignment:
Q  76 tgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||||||||||| ||||||||||||||||||    
T  36154441 tgctcgctatggcgagctgcgacatgcaactcgcgaggcggg 36154400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 22959157 - 22959085
Alignment:
Q  44 ctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| | |||||||  ||| | ||||||||||||||| | |||||||||||||||||    
T  22959157 ctctctggtcatgctcgctatgacgagttcaactgttcgctatggcgagctgcaatgtgcaactcgcgaggcg 22959085  T

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Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 14079684 - 14079714
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  14079684 tggcgagctgcgacgtgcaactcgcgaggcg 14079714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 21741164 - 21741116
Alignment:
Q  47 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgc 95  Q
    ||||||||  |||||||||||||||  |||||| |||||||||||||||    
T  21741164 tctggtcacactcgctaggcgagttaatctgctcgctatggcgagctgc 21741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 31342597 - 31342669
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| |||| |||||||| ||||||||   || || ||| ||||||||||| |||||||||||||||||||    
T  31342597 ctctctagtcatgctcgctatggcgagttaagctactcgctgtggcgagctgcaacgtgcaactcgcgaggcg 31342669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 3e-35; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 32 - 127
Target Start/End: Complemental strand, 23654046 - 23653951
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23654046 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 23653951  T

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Target: chr2; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 23286335 - 23286430
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||    
T  23286335 aaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaaagttac 23286430  T

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Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 34 - 125
Target Start/End: Original strand, 23060817 - 23060908
Alignment:
Q  34 atcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||||||    
T  23060817 atcttgcatgctctttggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaacccgcgaggtggggaaaggtt 23060908  T

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Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 23660501 - 23660592
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  23660501 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 23660592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 27754054 - 27754153
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| || ||||||||||||||||||  |||||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  27754054 atcacgaaatcttgcatgctatctggtcaagctcgctagcagagttcatctgctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaaggtt 27754153  T

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Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 28291938 - 28291857
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  28291938 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgagg 28291857  T

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Target: chr2; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 23076919 - 23077016
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||| |  ||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  23076919 atcacgaaatcttgcatgctctgt--tcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcatctcgcgaggcggggaaaggtt 23077016  T

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Target: chr2; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 298457 - 298369
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||||  ||||| ||||||||||| |||||||||||||||||||||    
T  298457 atcacgaaatcttgcatgctctctggtcaagctcgctatggcgagttcagctgctcgctatggcgagttgcgacgtgcaactcgcgagg 298369  T

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Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 20309579 - 20309662
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | | ||||||||||||||| |||||||||||||||||    
T  20309579 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgatatggcgagctgcgatgtgcaactcgcgaggcg 20309662  T

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Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 32451553 - 32451479
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  32451553 ctctctggtcatgctcgctatggcgagttcatctgcttgctatggcgagctgcgtcgtgcaactcgcgaggcggg 32451479  T

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Target: chr2; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 22337594 - 22337685
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| |||||||||||||||   ||||| ||| |||||||||    
T  22337594 atcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcatctcacgaggcggg 22337685  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 22730875 - 22730776
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| |||| |||||| |||||| ||| |||||||||||| ||||| |||||| ||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  22730875 atcacgaaatattgcatgctctctagtcgagctcgctaggccagttcatctgctcgctatggcgagctacgatgtgcaactcgcaaggcggggagaggtt 22730776  T

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Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 37763 - 37680
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||| |||||| || ||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||||| ||||||||    
T  37763 aaattttgcatgctttctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacatgcaacttgcgaggcg 37680  T

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Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 22737822 - 22737735
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| |||||||||||  ||||| ||||||||||||| |||||||| |||||| |||| |||||||| ||||||| |||||||||||    
T  22737822 atcacgaaatcttgcatgatctctagtcaagctcgctacgcgagttcatctgctcgctagggcgagcttcgacgtggaactcgcgagg 22737735  T

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Target: chr2; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 40621833 - 40621762
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||   || | | | |||||||||||||||||||||||||||||||    
T  40621833 ctctctggtcaagctcgctaggcgagttcagttgttcgttgtggcgagctgcgacgtgcaactcgcgaggcg 40621762  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 22740596 - 22740513
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  22740596 aatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 22740513  T

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Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 43 - 117
Target Start/End: Original strand, 7679792 - 7679866
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  7679792 cctctctggtcacactcgctaggcgagtgaatctgctcgatatggcgagctgcaaggtgcaactcgcgaggcggg 7679866  T

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Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 22133841 - 22133769
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | |||| | |||||||||||||||||||||| |||||    
T  22133841 ctctctggtcatgctcgctatggcgagttcatctgttcgctacgacgagctgcgacgtgcaactcgcaaggcg 22133769  T

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Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 22758351 - 22758268
Alignment:
Q  33 aatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||| ||| ||||||||||| |||||||| |||||||||   || | | | |||||||||||||||||||||||||||||||    
T  22758351 aatcttacatgctctctggtcatgctcgctatggcgagttcggttgttcgatgtggcgagctgcgacgtgcaactcgcgaggcg 22758268  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 24658134 - 24658213
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaagg 123  Q
    |||||| ||| ||||||||||||||||||  ||| | |   ||||||||||| |||||||||| ||||||||||||||||    
T  24658134 ctctctagtctagctcgctaggcgagttcaactgttcgtcgtggcgagctgcaacgtgcaacttgcgaggcggggaaagg 24658213  T

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Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 23038541 - 23038599
Alignment:
Q  56 gctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||||||| | |||||| | | ||||||||||| ||||||||||||||||||    
T  23038541 gctcgctaggcgagtacatctgctcgttgtggcgagctgcaacgtgcaactcgcgaggc 23038599  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 23100867 - 23100785
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||||||||| ||||||||||| ||| |||| |||||||||   || | ||| |||| ||||||||||||||||||||||||    
T  23100867 aaatcttgcatgctctctggtcatgcttgctatggcgagttcagttgttcgctgtggctagctgcgacgtgcaactcgcgagg 23100785  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 20519711 - 20519670
Alignment:
Q  75 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgg 116  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    
T  20519711 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcgg 20519670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 22798709 - 22798680
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||||||||||||||||||||||    
T  22798709 tggcgagctgcgacgtgcaactcgcgaggc 22798680  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 46 - 115
Target Start/End: Original strand, 25176341 - 25176410
Alignment:
Q  46 ctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||  ||||||||||||||   |||||| ||||||| ||||||| | ||||||||| |||||||    
T  25176341 ctctggtcacactcgctaggcgagtgaatctgctcgctatggtgagctgcaaggtgcaactcacgaggcg 25176410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 117
Target Start/End: Complemental strand, 22412648 - 22412612
Alignment:
Q  81 gctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||| | |||||||||||||||||||    
T  22412648 gctatggcgagctgcaaggtgcaactcgcgaggcggg 22412612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 23705890 - 23705830
Alignment:
Q  57 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||   |||||| | ||||||||||||| | |||||||||||||||||||    
T  23705890 ctcgataggcgagtgaatctgctcgttatggcgagctgcaaagtgcaactcgcgaggcggg 23705830  T

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Target: scaffold0056 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 16851 - 16761
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 122  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  16851 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgatgtgcaactcgcgaggcggggaaag 16761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 79001 - 78905
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||   || | || |||| ||||||| ||||||||||||||| |||||||||||||    
T  79001 acaaaatcttgcatgctctctggtctagctcgcgaggcgagttcaagtgttcgccatggggagctgcaacgtgcaactcgcgatgcggggaaaggtt 78905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 74; Significance: 5e-34; HSPs: 3)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 839 - 920
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  839 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 3987 - 4027
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  3987 tggcgagctgcgacgtgcaactcgcgaggcagggaaaggtt 4027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 3949 - 3985
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgct 62  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  3949 atcacgaaatcttgcatgctctctggtcaagctcgct 3985  T

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Target: scaffold0540 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 655 - 556
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| |||||||||||    
T  655 atcacaaaatcttacaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgcaaggtggggaaaggtt 556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 125061 - 125160
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||| | ||||||||||||||||    
T  125061 atcaccaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagttgcgacgtgcaacttgtgaggcggggaaaggtt 125160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 175249 - 175333
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  175249 aaatcttgcatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 175333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 63058 - 63130
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||||||||||||    
T  63058 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcg 63130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 71; Significance: 3e-32; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 20067 - 19969
Alignment:
Q  27 tcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||| ||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  20067 tcacgaaatcttgcatgctctctggtcaagctcgctaggtgagttcatctgctcgctatggcgagctgcgacatgcaactcgcgaggcgaggaaaggtt 19969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 115
Target Start/End: Complemental strand, 65433 - 65346
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||| ||| ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  65433 acaaaatcttacatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 65346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 17644 - 17559
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||    
T  17644 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctacgacgtgcaactcgcgaggcggg 17559  T

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Target: scaffold0122 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 25701 - 25608
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||  |||||| |||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  25701 aaatcttgcaagctctctagtcaagctcgctaggcgagttcatctactcgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 25608  T

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Target: scaffold0122; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 33136 - 33048
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  33136 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcaagctgcgacgtgcaactcgcgaggc 33048  T

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Target: scaffold0413 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 122
Target Start/End: Complemental strand, 15249 - 15161
Alignment:
Q  34 atcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 122  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  15249 atcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcgacgtacaactcgcgaggcgggtaaag 15161  T

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Target: scaffold0088 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 21372 - 21464
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    |||||||||||||| |||||| |||||||||||||||||||||| ||| || ||||||||||||||| |||||||||||||||||||||||||    
T  21372 acaaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctcctcgctatggcgagctgcaacgtgcaactcgcgaggcggggaaa 21464  T

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Target: scaffold2044 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 1098 - 999
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  1098 atcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcagctgctcgctatggcgaggtgcgacgtgcaactcacgaggcggggaaaggtt 999  T

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Target: scaffold0839 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 1720 - 1621
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||| |||||||    
T  1720 atcacagaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcgggaaaaggtt 1621  T

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Target: scaffold0266 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 18600 - 18509
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||| |||||||||||||||    
T  18600 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatcttctcgctatggcgagctgcaacgtgaaactcgcgaggcggg 18509  T

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Target: scaffold0175 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 13571 - 13670
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||| ||||||    
T  13571 atcacgaaatcttgcatgctctctagtcaagctcgctaggcgagttcatctgctcgctattgcgagctgcgatgtgcaactcgcgaggcgggggaaggtt 13670  T

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Target: scaffold0175; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 34605 - 34688
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||| |||||||||||||||||||||||    
T  34605 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagttgcgacgtgcaactcgcgaggcg 34688  T

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Target: scaffold0124 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 24292 - 24193
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  24292 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 24193  T

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Target: scaffold0389 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 13244 - 13150
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtta 126  Q
    ||||||||||| |||||||||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||||| ||||||||||||| ||||    
T  13244 aaatcttgcatgctctctggtcaagctcgctaggagagttcatctgctcgctgtggcgagctgcgacgtgcaactcacgaggcggggaaaagtta 13150  T

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Target: scaffold0358 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 410 - 492
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  410 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggc 492  T

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Target: scaffold0358; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 5186 - 5268
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  5186 aaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggc 5268  T

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Target: scaffold0718 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 4778 - 4695
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  4778 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 4695  T

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Target: scaffold0627 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 383 - 474
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  383 atcacgaaatcttgcatgctctctggtcaagctcgctaggggagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 474  T

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Target: scaffold0351 (Bit Score: 64; Significance: 5e-28; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 16753 - 16836
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||    
T  16753 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 16836  T

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Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 16881 - 16911
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  16881 tggcgagctgcgacgtgcaactcgcgaggcg 16911  T

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Target: scaffold0228 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 4987 - 5082
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  4987 atcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 5082  T

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Target: scaffold0228; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 12569 - 12664
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  12569 atcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 12664  T

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Target: scaffold0228; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 22521 - 22616
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||| ||||||||||  |||||| |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  22521 atcacgaaatcttgcaagctctctagtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 22616  T

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Target: scaffold0084 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 121
Target Start/End: Original strand, 10637 - 10732
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||| ||||||||||  ||||||||||||||||||||||| ||||| |||||| ||||||||||||||| | |||||||||||||||||||||||    
T  10637 atcacgaaatcttgcaagctctctggtcaagctcgctaggcaagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggggaaa 10732  T

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Target: scaffold0046 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 14959 - 15057
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||||| |||||||||| ||||||||||||||||||   || |||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  14959 acaaaatcttgcatgctctctggtctagctcgctaggcgagttcaagtgtttgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaagttac 15057  T

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Target: scaffold0247 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 6464 - 6371
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| |||| | |||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||| | ||||||    
T  6464 aaatcttgcattctctatagtcaagctcgctaggcgagttcatctgctcgctatggcgaggtgcgacgtgcaactcgcgaggcggagcaaggtt 6371  T

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Target: scaffold0026 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 39567 - 39474
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||| |||| |||||||||||||||||| |||||||||| |||||| |||||||||||||||  ||||| ||||||||||||||||||||||    
T  39567 aaatctggcatgctctctggtcaagctcgcgaggcgagttcatctgctcgctatggcgagctgcatcgtgctactcgcgaggcggggaaaggtt 39474  T

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Target: scaffold0026; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 113
Target Start/End: Original strand, 40335 - 40422
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| ||||||||||| |||||||||||||||| |||||||||| | |||||| |||||||| ||||||   |||||||||||||||    
T  40335 atcacgaaatcttgcatgctctctggtcaagctcactaggcgagtacatctgctcgctatggctagctgcagggtgcaactcgcgagg 40422  T

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Target: scaffold0151 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 10623 - 10711
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||||||||    
T  10623 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcaaggtgcaactcgcgaggc 10711  T

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Target: scaffold0042 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 23944 - 23856
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||| ||||||||||| |||||| |||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||    
T  23944 atcacgaaatcttgcatgctctctagtcaagcttgctaggcgagttcatccgctcgctatggcgagctgcgacgtgcaactcgcgaggc 23856  T

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Target: scaffold0490 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 2426 - 2521
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||| ||||| |||  |||||||||||||| |||||||||    
T  2426 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgctcgctatggcgagttgcgaggtgttactcgcgaggcgggaaaaggttac 2521  T

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Target: scaffold0456 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 10073 - 9990
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  10073 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 9990  T

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Target: scaffold0395 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 604 - 513
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||| ||||   |||||||||||||||||||    
T  604 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgacctgcagggtgcaactcgcgaggcggg 513  T

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Target: scaffold0395; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 8134 - 8044
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| ||||||||||  |||||||||||  ||||||| |||||||     |||| ||||||||||||||||| |||||||||||||||||    
T  8134 atcacgaaatcttgcaagctctctggtcagactcgctacggcgagtaaacttgctcgctatggcgagctgcgaagtgcaactcgcgaggcg 8044  T

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Target: scaffold0347 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 506 - 605
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  ||||| ||||||||||||||| ||||||||||||||||  | |||||||||    
T  506 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgagaagaggaaaggtt 605  T

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Target: scaffold0261 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 16140 - 16238
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||||| |||||||||| ||||||||||||||||||   || | || |||||||||||| ||||||||||||||||||||||||| |||||    
T  16140 acaaaatcttgcatgctctctggtctagctcgctaggcgagttcaattgttcgccatggcgagctgcaacgtgcaactcgcgaggcggggaaaagttac 16238  T

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Target: scaffold0070 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 5003 - 5093
Alignment:
Q  27 tcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| ||||||||||  ||||||||||||| ||||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||    
T  5003 tcacgaaatcttgcaagctctctggtcaagatcgctaggcgagttcatctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 5093  T

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Target: scaffold1992 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold1992
Description:

Target: scaffold1992; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 289 - 373
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||||||| ||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||| |||||    
T  289 ctctctggtcatgctcgctatggcgagttcatctgctcgctaaggcgagctgcgacgtgcaactcgcgaggcggggaaaagttac 373  T

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Target: scaffold0639 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 8954 - 9022
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctg 94  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  8954 atcacaaaatcttgcatgctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctg 9022  T

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Target: scaffold0876 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 2727 - 2636
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  ||||||||||||||||||||||||||||| ||||||  |||||||||||||| | |||||||||| ||||||||    
T  2727 atcacgaaatcttgcaagctctctggtcaagctcgctaggcgagttcatctgctcactatggcgagctgcaaggtgcaactcgtgaggcggg 2636  T

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Target: scaffold0598 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 699 - 616
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||| || |||||||||| |||||||||||||||||| | || ||||||||||||||||||||||||||||| |||||||    
T  699 aaatcttgaatgctctctggtctagctcgctaggcgagttcatatgtttgctatggcgagctgcgacgtgcaactcacgaggcg 616  T

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Target: scaffold0121 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 8175 - 8076
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||| || ||||||  |||||||||||||||| |||||||| |||||| ||| |||||||    
T  8175 atcacgaaatcttgcatgctctttggtcaagctcgctaggcgagctcatctgctccctatggcgagctgcgatgtgcaacttgcgaggtgggaaaaggtt 8076  T

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Target: scaffold0100 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 117
Target Start/End: Original strand, 20591 - 20682
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| || ||| |||||||||||||||   ||||||||| |||||||||    
T  20591 atcacgaaatcttgcatgctctctggtcaagctcgctaggcgagttcatccgctcgctatggcgagctgcagggtgcaactcacgaggcggg 20682  T

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Target: scaffold0064 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 47460 - 47543
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| | || | ||||||||||||||| |||||||||||||||||||    
T  47460 aaatcttgcatgctctctggtctagctcgctaggcgagttcatttgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 47543  T

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Target: scaffold0037 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 113
Target Start/End: Complemental strand, 79974 - 79887
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| ||||||||||| |||||||||||||||||| ||||||||||  || || ||||||||||||||| |||||||||||||||||    
T  79974 atcacgaaatcttgcatgctctctggtcaagctcgcgaggcgagttcaacttctcgctatggcgagctgcaacgtgcaactcgcgagg 79887  T

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Target: scaffold0427 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 13969 - 14051
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||| |||||||||| |||||||||||| ||||| |||| | |||||||||||||||||| |||||||||||||||    
T  13969 aaatcttgcatgctctctggtctagctcgctaggcaagttcatctgttcgctatggcgagctgcgacatgcaactcgcgaggc 14051  T

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Target: scaffold0364 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 17244 - 17171
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||||||   |||||||||||||||||||    
T  17244 ctctctggtcaagctcgctaggcgagttcatctgctcgctatggcgagctgcagggtgcaactcgcgaggcggg 17171  T

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Target: scaffold0120 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 46404 - 46500
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaag 122  Q
    ||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || |||||||||||||||| ||||    
T  46404 atcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcgggtaaag 46500  T

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Target: scaffold0120; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 32601 - 32510
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||  ||||||||||||| |||| |||||||||| |||||| ||||||||||||||| | || ||||||||||||||||    
T  32601 atcacgaaatcttgcaagctctctggtcaagttcgcgaggcgagttcatctgctcgctatggcgagctgcaaggtacaactcgcgaggcggg 32510  T

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Target: scaffold0120; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 16571 - 16656
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||| ||||||||||||||| || ||| | |||| | |||||||||||||   |||||||| ||||||||||    
T  16571 aaatcttgcatgctctctcgtcaagctcgctaggtgatttcatttgctcgttatggcgagctgcatggtgcaacttgcgaggcggg 16656  T

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Target: scaffold0423 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 10908 - 10825
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| | |||||||||||||||||| ||||| |||| |||||    
T  10908 aaatcttgcatgctctctggtctagctcgctaggcgagttcatctgttcgctatggcgagctgcgacttgcaattcgcaaggcg 10825  T

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Target: scaffold0114 (Bit Score: 52; Significance: 7e-21; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 15112 - 15029
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||||||||||||| || | | || |||| |||||||||||||||||||||||||||    
T  15112 aaatcttgcatgctctctggtccagctcgctaggcgagttcatcagttcgcgatggtgagctgcgacgtgcaactcgcgaggcg 15029  T

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Target: scaffold0114; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 32912 - 32829
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||||| |||||||| ||||||||| || | | |  ||||| ||||||||||||||||||||||||||    
T  32912 aaatcttgcatgctctctggtctagctcgcttggcgagttcatcagttcgagatggctagctgcgacgtgcaactcgcgaggcg 32829  T

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Target: scaffold0107 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 15072 - 14981
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| |||||| ||||||||||| || |||||||  ||||| |||||||| |||||| |||||||||||||||||||||    
T  15072 atcacgaaatcttgcatgctctctagtcaagctcgcgagacgagttcaactgctcgctatggcaagctgcaacgtgcaactcgcgaggcggg 14981  T

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Target: scaffold0161 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 2084 - 1986
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||   || | ||  |||| |||||| |||||||||||||||||||||||||||||||    
T  2084 acaaaatcttgcatgctctctagtctagctcgctaggcgagttcaagtgttcgccgtggcaagctgcaacgtgcaactcgcgaggcggggaaaggttac 1986  T

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Target: scaffold0142 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 17277 - 17351
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||||||    
T  17277 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagctgcgacgtgcaactcgtgaggcggg 17351  T

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Target: scaffold0346 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 17363 - 17267
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||  |  | || |||||||||||| |||||||||||||||| ||||||| ||||    
T  17363 acaaaatcttgcatgctctcttgtctagctcgctaggcgagttccagttttcgccatggcgagctgcaacgtgcaactcgcgagacggggaagggtt 17267  T

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Target: scaffold0221 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 12451 - 12360
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||| ||||||||||| |||||| ||||||||||  || || ||||||||||| ||||||||| | |||||||||||||    
T  12451 atcacgaaatcttgcatgctctctggtcaggctcgcgaggcgagttcaactactcgctatggcgagttgcgacgtgaagctcgcgaggcggg 12360  T

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Target: scaffold0192 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 10389 - 10488
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||||| ||| |||||| |||| |||||| ||||||||||  || || |||||||| |||||| |||||||||||| |||||| |||||||||    
T  10389 atcacaaaatcttacatgctctctagtcaggctcgcgaggcgagttcaactactcgctatggcaagctgcaacgtgcaactcgtgaggcgaggaaaggtt 10488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 127
Target Start/End: Original strand, 32538 - 32633
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    ||||||||||| |||| ||||| ||||||||||||||||||   || |  |  ||||||||||| |||||||||||||||||||||||||||||||    
T  32538 aaatcttgcatgctctttggtctagctcgctaggcgagttcaagtgttcaccgtggcgagctgcaacgtgcaactcgcgaggcggggaaaggttac 32633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 2427 - 2353
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcgggg 118  Q
    |||||||||||  |||||||||||| ||| |||| | || |||||||||||||||||||||||||||||||||||    
T  2427 ctctctggtcatactcgctaggcgaattcatctgttcgcaatggcgagctgcgacgtgcaactcgcgaggcgggg 2353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 5319 - 5417
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||||| |||||| ||| ||||||| ||||||||||   || | || ||||||||||||  ||||||||||||||||| ||||||||||||    
T  5319 acaaaatcttgcatgctctctagtctagctcgcaaggcgagttcaagtgttcgccatggcgagctgcaccgtgcaactcgcgaggctgggaaaggttac 5417  T

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Target: scaffold0218 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 28919 - 28821
Alignment:
Q  29 acaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||||| |||||| ||| ||||||||||| ||||||   || | ||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  28919 acaaaatcttgcatgctctctagtctagctcgctaggtgagttcaagtgttcgccgtggcgagctgcaacgtgcacctcgcgaggcggggaaaggttac 28821  T

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Target: scaffold0218; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 7641 - 7572
Alignment:
Q  48 ctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||| ||||||||||| ||||| |||||| ||||||||||||| |   |||||||||||||||||||    
T  7641 ctggtcatgctcgctaggcaagttcatctgctcgctatggcgagctacatggtgcaactcgcgaggcggg 7572  T

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Target: scaffold0145 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 39244 - 39330
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttacc 128  Q
    ||||||||||| ||||||||||||||||||||||||||| | |||||| |||          |||||||||||||||||||||||||||||||||||    
T  39244 aaatcttgcatgctctctggtcaagctcgctaggcgagtacatctgctcgct----------gcgacgtgcaactcgcgaggcggggaaaggttacc 39330  T

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Target: scaffold0211 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 28433 - 28361
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| |||||||||||||||||||    
T  28433 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaacgtgcaactcgcgaggcg 28361  T

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Target: scaffold0106 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 1760 - 1844
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  1760 aaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 1844  T

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Target: scaffold0106; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 7737 - 7821
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||||||| | |||||||| |||||||||  ||| | ||| |||||||||||||||||||||||||||||||    
T  7737 aaatcttgcatgctctctggttatgctcgctatggcgagttcagctgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 7821  T

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Target: scaffold0106; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 16132 - 16213
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgag 112  Q
    |||||||| || ||||||||||| |||||||| |||||||||   || | ||| ||||||||||||||||||||||||||||    
T  16132 aaatcttggatgctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgag 16213  T

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Target: scaffold1137 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 1925 - 1854
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||| ||||| ||||||||||||||||| |||  | ||||||||||||| |||||||||||||||||||||    
T  1925 ctctcaggtcatgctcgctaggcgagttcatctattcgctatggcgagctacgacgtgcaactcgcgaggcg 1854  T

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Target: scaffold0217 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 16241 - 16150
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| |||||||||   |||| |||||||||||||||||| ||||| |||||| |||||||||| |||| | || ||||||||||||||||    
T  16241 atcacgaaatcttgctagctctgtggtcaagctcgctaggcaagttcatctgctcgctatggcgatctgcaaggtacaactcgcgaggcggg 16150  T

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Target: scaffold0810 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 3429 - 3503
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||||||||| ||||| ||||||||||| |||||||    
T  3429 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgagttgcgaggtgcaactcgcaaggcggg 3503  T

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Target: scaffold0555 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 1064 - 1146
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||| ||||||||||||||| ||||||||||||   ||||| ||  ||||||| ||| ||||||||||||||||||    
T  1064 aaatcttgcatgctctctggtcaagcttgctaggcgagttaggctgctcgcggtggcgagttgcaacgtgcaactcgcgaggc 1146  T

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Target: scaffold0555; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 10192 - 10108
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggttac 127  Q
    |||||||||||  ||||| | ||||||||| |||| | ||||||||||||||| | ||||||||||||||||| ||||| |||||    
T  10192 ctctctggtcacactcgcgatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcgaggaaaagttac 10108  T

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Target: scaffold0503 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 12425 - 12499
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||||||| |||||||||||||||||  ||||||||    
T  12425 ctctctggtcatgctcgctatggcgagttcatctgctcgctatggcgggctgcgacgtgcaactcatgaggcggg 12499  T

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Target: scaffold0059 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 125
Target Start/End: Original strand, 19308 - 19370
Alignment:
Q  63 aggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||    
T  19308 aggcgagttcaactgctcgctatggcgagctgcaacgtgcaactcgcgaggcgaggaaaggtt 19370  T

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Target: scaffold0309 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 117
Target Start/End: Original strand, 7084 - 7168
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||| | |||||||||| ||||||||||||||||| | ||||| ||||||||||| ||||| |||  ||||||||||||||    
T  7084 aaatcttgcgtgctctctggtctagctcgctaggcgagtt-cactgctcgctatggcgagttgcgaggtgttactcgcgaggcggg 7168  T

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Target: scaffold0207 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 2268 - 2196
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||| | |||||||||||||||||    
T  2268 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcaaggtgcaactcgcgaggcg 2196  T

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Target: scaffold0621 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 7033 - 7103
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||||||||||||  |||||||||||||||    
T  7033 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcggggtgcaactcgcgagg 7103  T

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Target: scaffold0167 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 36005 - 35935
Alignment:
Q  55 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    |||||||||||||||| | |||||| ||| ||||||||||| | ||||||||||||||||| || ||||||    
T  36005 agctcgctaggcgagtacatctgctcgctgtggcgagctgcaaagtgcaactcgcgaggcgagggaaggtt 35935  T

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Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 51508 - 51438
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||||||||| |||||||| |||||||||  ||||| ||||| | |||||||||||||||||||||||||    
T  51508 ctctctggtcatgctcgctatggcgagttcagctgctcgctatcgtgagctgcgacgtgcaactcgcgagg 51438  T

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Target: scaffold0034; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 33033 - 33105
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||    ||||| ||||||||||||||| | |||||||||||||||||||    
T  33033 ctctctggtcacactcgctaggcgagtgaa-ctgctcgctatggcgagctgcaatgtgcaactcgcgaggcggg 33105  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 115
Target Start/End: Original strand, 1 - 55
Alignment:
Q  61 ctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||| || |||| | |||||||||||||||||||||||||||||||||||    
T  1 ctaggcgagatcatctgttcgctatggcgagctgcgacgtgcaactcgcgaggcg 55  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 101891 - 101965
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||| ||| ||||||||| || | | ||||||||| |||||||||||||||||||||||||||    
T  101891 ctctctggtcatgctcactatggcgagttcatcagttcgctatggcgtgctgcgacgtgcaactcgcgaggcggg 101965  T

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Target: scaffold1257 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 117
Target Start/End: Complemental strand, 1923 - 1850
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| |||||||||| |||| | |||||||||||||||||||    
T  1923 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgaactgcaaggtgcaactcgcgaggcggg 1850  T

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Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 70277 - 70362
Alignment:
Q  31 aaaatcttgcatcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||| ||||||||||| |||||||| || |||||    || | ||| |||||||||||||||||||||||||||||||    
T  70277 aaaatcttgcatgctctctggtcatgctcgctatggtgagtttagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 70362  T

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Target: scaffold0476 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 115
Target Start/End: Original strand, 8297 - 8369
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||||||||||| | || ||||||||||||||    
T  8297 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtccaactcgcgaggcg 8369  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 13450 - 13510
Alignment:
Q  57 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||||||   |||||| ||||||||||||||| | |||||||||||||||||||    
T  13450 ctcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 13510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 7308 - 7378
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||||||||| |||||||| ||||||||| |||| | ||||||| ||||||| | |||||||||||||||    
T  7308 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggagagctgcaaggtgcaactcgcgagg 7378  T

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Target: scaffold0556; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 8513 - 8586
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||||||||||  ||||||||||||||   |||||| | ||||||||||||| | |||||||||  ||||||||    
T  8513 ctctctggtcacactcgctaggcgagtgaatctgctcgttatggcgagctgcaaggtgcaactcatgaggcggg 8586  T

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Target: scaffold0507 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 7678 - 7608
Alignment:
Q  47 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||  ||||||||||||||   ||||||  |||||||||||||||| ||||||||| |||||||||    
T  7678 tctggtcacactcgctaggcgagtgaatctgctccctatggcgagctgcgaggtgcaactcacgaggcggg 7608  T

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Target: scaffold0102 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 19763 - 19837
Alignment:
Q  44 ctctctggtcaagctcgctagg-cgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||||| |||||| | | ||| ||| |||| | ||||||||||||||||| |||||||||||||||||||    
T  19763 ctctctggtcatgctcgcaatgacgaattcatctgttcgctatggcgagctgcgaggtgcaactcgcgaggcggg 19837  T

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Target: scaffold0078 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 117
Target Start/End: Original strand, 11028 - 11098
Alignment:
Q  47 tctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||||||  ||||||||||||||   |||||| ||||||||||||||| | ||||||||||| |||||||    
T  11028 tctggtcacactcgctaggcgagtgaatctgctcgctatggcgagctgcaaggtgcaactcgcaaggcggg 11098  T

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Target: scaffold0001 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 161182 - 161260
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaa 121  Q
    ||||||||||| |||||||| ||||||||| |||| | |||||||||||||||   |||||||| |||||||| |||||    
T  161182 ctctctggtcatgctcgctatggcgagttcatctgttcgctatggcgagctgcatggtgcaactagcgaggcgaggaaa 161260  T

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Target: scaffold0166 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 9470 - 9382
Alignment:
Q  32 aaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaaaggtt 125  Q
    ||||||||||| || |||||||| ||||||     ||||||  ||||| |||||||||| |||| ||||||| ||||||||||| |||||||||    
T  9470 aaatcttgcatgctatctggtcaggctcgc-----gagttcaactgctcgctatggcgaactgcaacgtgcacctcgcgaggcgaggaaaggtt 9382  T

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Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 80863 - 80904
Alignment:
Q  74 tctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  80863 tctgcttgctatggcgagctgcaaggtgcaactcgcgaggcg 80904  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 190922 - 190833
Alignment:
Q  28 cacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  ||||||||||||    
T  190922 cacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcgaggcggg 190833  T

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Target: scaffold0017; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 28 - 117
Target Start/End: Complemental strand, 192625 - 192536
Alignment:
Q  28 cacaaaatcttgcatcctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    |||| |||||||||| || ||| ||||||||||||||| |||||   |||||  |||||||||| ||| |||||||  ||||||||||||    
T  192625 cacagaatcttgcatgctatctagtcaagctcgctaggtgagttaggctgctcactatggcgagttgcaacgtgcaggtcgcgaggcggg 192536  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 130404 - 130469
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcg 108  Q
    ||||||||||| |||||||| |||||||||  ||| | ||||||||||||||||| ||||||||||    
T  130404 ctctctggtcatgctcgctatggcgagttcaactgttcgctatggcgagctgcgaggtgcaactcg 130469  T

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Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 15895 - 15967
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||||   || | ||| |||||||||||||||| ||||||||||||||    
T  15895 ctctctggtcatgctcgctatggcgagttcagttgttcgctgtggcgagctgcgacgttcaactcgcgaggcg 15967  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 8582 - 8510
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| ||||| || |||||||||   || | ||| |||||||||||||||||||||||||||||||    
T  8582 ctctctggtcatgctcggtatggcgagttcagttgttcgctgtggcgagctgcgacgtgcaactcgcgaggcg 8510  T

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Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 52068 - 52136
Alignment:
Q  48 ctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||| |||||||| |||||| || |||| | |||||||||| |||||||||||||||||| |||||    
T  52068 ctggtcatgctcgctatggcgagctcatctgttcgctatggcgatctgcgacgtgcaactcgctaggcg 52136  T

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Target: scaffold0333 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 7109 - 7180
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| ||||||||||    
T  7109 cctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 7180  T

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Target: scaffold0333; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 14489 - 14560
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    ||||||||||||  ||||||| ||||||   |||||| ||||||||||||||| | ||||| ||||||||||    
T  14489 cctctctggtcacactcgctaagcgagtgaatctgctcgctatggcgagctgcaaggtgcacctcgcgaggc 14560  T

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Target: scaffold0273 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 9049 - 8986
Alignment:
Q  57 ctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 120  Q
    |||||||||||| |   |||||| ||||||||||||||| | |||||||| |||||||||||||    
T  9049 ctcgctaggcgactgaatctgctcgctatggcgagctgcaaggtgcaacttgcgaggcggggaa 8986  T

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Target: scaffold0130 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 29015 - 29054
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctagg 65  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  29015 atcacgaaatcttgcatgctctctggtcaagctcgctagg 29054  T

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Target: scaffold1984 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 627 - 697
Alignment:
Q  44 ctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggc 114  Q
    |||||||||||  ||||||||||||||   |||||| ||||||| ||||| | | ||||||||||||||||    
T  627 ctctctggtcacactcgctaggcgagtgaatctgctcgctatggagagctacaaggtgcaactcgcgaggc 697  T

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Target: scaffold1895 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8 - 54
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 72  Q
    ||||| ||||||||||  ||||||||||||||||||| |||||||||    
T  8 atcacgaaatcttgcaagctctctggtcaagctcgctcggcgagttc 54  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 21389 - 21359
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  21389 tggcgagctgcgacgtgcaactcgcgaggcg 21359  T

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Target: scaffold0210; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 29281 - 29251
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  29281 tggcgagctgcgacgtgcaactcgcgaggcg 29251  T

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Target: scaffold0131 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Original strand, 36993 - 37023
Alignment:
Q  85 tggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||||||||||||||||||    
T  36993 tggcgagctgcgacgtgcaactcgcgaggcg 37023  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 7936 - 7890
Alignment:
Q  26 atcacaaaatcttgcatcctctctggtcaagctcgctaggcgagttc 72  Q
    ||||||||||||||||| |||||| |||| |||||| ||||||||||    
T  7936 atcacaaaatcttgcatgctctctagtcaggctcgcgaggcgagttc 7890  T

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Target: scaffold0040 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 103178 - 103136
Alignment:
Q  75 ctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggg 117  Q
    ||||| ||||||||||||||| | |||||||||||||||||||    
T  103178 ctgctcgctatggcgagctgcaaggtgcaactcgcgaggcggg 103136  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 15455 - 15389
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgc 109  Q
    ||||||||||||  ||||||||||||||   |||||| ||||||| ||||||| | |||||||||||    
T  15455 cctctctggtcacactcgctaggcgagtgaatctgctcgctatggggagctgcaaggtgcaactcgc 15389  T

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Target: scaffold0020; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 179157 - 179217
Alignment:
Q  55 agctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    |||||||||||||||| |   || | ||| |||||||||||| ||||||||||||||||||    
T  179157 agctcgctaggcgagtacaattgttcgctgtggcgagctgcgtcgtgcaactcgcgaggcg 179217  T

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Target: scaffold0530 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 653 - 576
Alignment:
Q  43 cctctctggtcaagctcgctaggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcggggaa 120  Q
    ||||||||||||  |||||||||||| |   |||| | ||||||||||| ||| | |||||||||| |||||||||||    
T  653 cctctctggtcacactcgctaggcgattgaatctggtcgctatggcgagttgcaaggtgcaactcgtgaggcggggaa 576  T

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Target: scaffold0357 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 113
Target Start/End: Original strand, 3264 - 3335
Alignment:
Q  42 tcctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgagg 113  Q
    ||||| |||||||| ||||||| |||||||   |||||| ||||||||||||||| || ||||||||||||||    
T  3264 tcctcactggtcaaactcgctatggcgagtga-tctgctcgctatggcgagctgcaacatgcaactcgcgagg 3335  T

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Target: scaffold0216 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 16746 - 16674
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||     |||||||||||||||||| |||| || |||||||||||||    
T  16746 ctctctggtcatgctcgctatggcgagtaaagttgcttgctatggcgagctacgacttgtaactcgcgaggcg 16674  T

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Target: scaffold0174 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 18078 - 18006
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||  |  || | ||| |||| ||||||||||||||||||||||||||    
T  18078 ctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcaagctgcgacgtgcaactcgcgaggcg 18006  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 4213 - 4285
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| |||||||||||    
T  4213 ctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcgaggcg 4285  T

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Target: scaffold0149; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 8644 - 8716
Alignment:
Q  44 ctctctggtcaagctcgcta-ggcgagttcctctgcttgctatggcgagctgcgacgtgcaactcgcgaggcg 115  Q
    ||||||||||| |||||||| |||||||  |  || | ||| ||||||||||||||||||| |||||||||||    
T  8644 ctctctggtcatgctcgctatggcgagtaacattgttcgctgtggcgagctgcgacgtgcacctcgcgaggcg 8716  T

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