View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11070_high_9 (Length: 297)
Name: NF11070_high_9
Description: NF11070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11070_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 38808470 - 38808746
Alignment:
| Q |
1 |
caatacatgattccaaaaacctgatatgatgctagcttctggacagatgataatataatatttttgtttaaggaattgtttacttggttatggtaccagt |
100 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38808470 |
caatacatgattccaaaaacatgatatgatgctagcttctggacagatgataatataatatttttgtttaaggaattgtttacttggttatggtaccagt |
38808569 |
T |
|
| Q |
101 |
ttgtctcnnnnnnncaacttttccttttgtttccttctactttcaagttccaacaattgtagttgactgtaacaaaatatcataattagttggaaattgt |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
38808570 |
ttgtctctttttttcaacttttccttttgtttccttctactttcaagttccaacaattgtagttgactgtaacaaaagatcataattagttggaaattgt |
38808669 |
T |
|
| Q |
201 |
tattgtccacggaattttctattcagcacatacattcaaggaagattatcttccttcaatttggtttgtgctcaatg |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38808670 |
tattgtccacggaattttctattcagcacatacattcaaggaagattatcttccttcaatttggtttgtgctcaatg |
38808746 |
T |
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