View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11070_low_12 (Length: 248)

Name: NF11070_low_12
Description: NF11070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11070_low_12
NF11070_low_12
[»] scaffold0138 (3 HSPs)
scaffold0138 (3-246)||(13186-13429)
scaffold0138 (137-246)||(18002-18111)
scaffold0138 (34-99)||(17823-17888)
[»] chr1 (71 HSPs)
chr1 (1-248)||(33681252-33681500)
chr1 (3-248)||(22921499-22921745)
chr1 (1-248)||(52927611-52927858)
chr1 (4-248)||(22237873-22238117)
chr1 (4-248)||(20637093-20637339)
chr1 (37-248)||(35981352-35981564)
chr1 (1-247)||(21754281-21754526)
chr1 (4-248)||(20248520-20248765)
chr1 (3-228)||(28194080-28194306)
chr1 (2-196)||(433303-433497)
chr1 (2-171)||(34510101-34510270)
chr1 (3-140)||(43697712-43697849)
chr1 (2-205)||(50209845-50210047)
chr1 (2-205)||(22532556-22532759)
chr1 (2-107)||(22355816-22355921)
chr1 (2-107)||(22357502-22357607)
chr1 (10-248)||(20918846-20919083)
chr1 (143-248)||(49261584-49261690)
chr1 (2-107)||(20846861-20846966)
chr1 (2-107)||(27250371-27250476)
chr1 (4-106)||(20135573-20135675)
chr1 (9-107)||(21027054-21027152)
chr1 (2-107)||(38801033-38801138)
chr1 (2-78)||(21301169-21301245)
chr1 (2-207)||(22354203-22354409)
chr1 (138-248)||(12271792-12271902)
chr1 (137-202)||(26065230-26065295)
chr1 (32-129)||(41049629-41049726)
chr1 (138-248)||(21861335-21861445)
chr1 (26-127)||(21861149-21861250)
chr1 (3-55)||(21714984-21715036)
chr1 (26-114)||(21895887-21895975)
chr1 (192-248)||(21896078-21896134)
chr1 (45-129)||(26065357-26065441)
chr1 (34-129)||(16367873-16367968)
chr1 (34-129)||(35260718-35260813)
chr1 (137-246)||(16368051-16368160)
chr1 (32-101)||(16759117-16759186)
chr1 (2-55)||(22468328-22468381)
chr1 (13-101)||(21162119-21162207)
chr1 (143-246)||(50686860-50686963)
chr1 (42-129)||(50687031-50687118)
chr1 (34-100)||(16381632-16381698)
chr1 (34-100)||(27652808-27652874)
chr1 (34-100)||(48521036-48521102)
chr1 (34-127)||(16093479-16093572)
chr1 (32-125)||(50613701-50613794)
chr1 (32-125)||(50621529-50621622)
chr1 (4-51)||(3472560-3472607)
chr1 (26-101)||(21342539-21342614)
chr1 (26-101)||(21347404-21347479)
chr1 (3-53)||(8761266-8761316)
chr1 (37-171)||(24087736-24087870)
chr1 (188-246)||(41049851-41049909)
chr1 (196-246)||(50613940-50613990)
chr1 (196-246)||(50621768-50621818)
chr1 (144-244)||(35260852-35260952)
chr1 (9-53)||(22432422-22432466)
chr1 (13-53)||(22831021-22831061)
chr1 (13-53)||(42864854-42864894)
chr1 (139-246)||(16381431-16381538)
chr1 (4-75)||(18181755-18181826)
chr1 (2-77)||(20091105-20091180)
chr1 (138-196)||(16758947-16759005)
chr1 (34-76)||(52940464-52940506)
chr1 (13-74)||(21787685-21787746)
chr1 (137-170)||(50613881-50613914)
chr1 (137-170)||(50621709-50621742)
chr1 (34-90)||(21533481-21533537)
chr1 (136-204)||(38801157-38801225)
chr1 (137-169)||(41049809-41049841)
[»] chr5 (60 HSPs)
chr5 (3-248)||(21329127-21329373)
chr5 (1-248)||(21565787-21566035)
chr5 (4-248)||(22959166-22959411)
chr5 (33-228)||(5888837-5889033)
chr5 (3-248)||(21741175-21741421)
chr5 (34-248)||(26011697-26011911)
chr5 (34-244)||(22144299-22144508)
chr5 (1-248)||(19669142-19669391)
chr5 (2-204)||(1096755-1096957)
chr5 (4-196)||(11580878-11581070)
chr5 (2-244)||(21871202-21871444)
chr5 (2-244)||(21875482-21875724)
chr5 (2-244)||(21985778-21986019)
chr5 (135-248)||(21501918-21502030)
chr5 (2-171)||(23390127-23390297)
chr5 (3-139)||(21498649-21498785)
chr5 (2-207)||(24529505-24529711)
chr5 (12-196)||(36154469-36154653)
chr5 (2-205)||(9078239-9078442)
chr5 (2-207)||(13095779-13095984)
chr5 (2-248)||(19660468-19660714)
chr5 (2-244)||(25431643-25431884)
chr5 (12-244)||(22119834-22120066)
chr5 (2-107)||(21292612-21292717)
chr5 (2-244)||(24493817-24494058)
chr5 (2-205)||(25421819-25422022)
chr5 (2-207)||(13025595-13025800)
chr5 (2-107)||(22075393-22075498)
chr5 (2-107)||(8286484-8286589)
chr5 (4-101)||(22107017-22107114)
chr5 (2-244)||(24766968-24767210)
chr5 (29-127)||(20026521-20026619)
chr5 (138-248)||(20026706-20026816)
chr5 (26-129)||(22177798-22177901)
chr5 (139-246)||(25743967-25744074)
chr5 (9-55)||(37724338-37724384)
chr5 (13-55)||(23201803-23201845)
chr5 (34-100)||(26732421-26732487)
chr5 (34-100)||(26740234-26740300)
chr5 (4-53)||(17918796-17918845)
chr5 (137-170)||(22177984-22178017)
chr5 (9-53)||(21366305-21366349)
chr5 (13-53)||(21887260-21887300)
chr5 (3-55)||(26704500-26704552)
chr5 (3-55)||(26974233-26974285)
chr5 (2-49)||(20910443-20910490)
chr5 (34-100)||(15796889-15796955)
chr5 (34-100)||(25574056-25574122)
chr5 (34-100)||(25575249-25575315)
chr5 (34-100)||(25576442-25576508)
chr5 (34-100)||(25744190-25744256)
chr5 (4-49)||(1858621-1858666)
chr5 (217-246)||(22178064-22178093)
chr5 (18-55)||(23500993-23501030)
chr5 (13-53)||(14079584-14079624)
chr5 (9-53)||(20805983-20806027)
chr5 (13-53)||(22032752-22032792)
chr5 (17-53)||(23512543-23512579)
chr5 (4-40)||(29916580-29916616)
chr5 (13-53)||(31342539-31342579)
[»] scaffold0078 (1 HSPs)
scaffold0078 (33-248)||(10772-10987)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-248)||(7054-7302)
scaffold0556 (3-248)||(8260-8505)
[»] chr7 (69 HSPs)
chr7 (32-248)||(22073160-22073376)
chr7 (42-248)||(16056572-16056778)
chr7 (1-246)||(44014419-44014665)
chr7 (3-248)||(16219348-16219593)
chr7 (1-248)||(67989-68237)
chr7 (1-248)||(9389325-9389573)
chr7 (34-244)||(12255454-12255663)
chr7 (3-248)||(47832052-47832297)
chr7 (3-248)||(16324250-16324495)
chr7 (1-244)||(810759-811003)
chr7 (34-244)||(2279781-2279990)
chr7 (1-248)||(18005891-18006132)
chr7 (4-190)||(12756350-12756535)
chr7 (2-207)||(38227765-38227970)
chr7 (2-248)||(28504932-28505177)
chr7 (4-196)||(17061593-17061785)
chr7 (4-193)||(44116804-44116992)
chr7 (2-205)||(3563995-3564198)
chr7 (2-204)||(9509476-9509679)
chr7 (2-205)||(15143667-15143871)
chr7 (32-171)||(21064823-21064962)
chr7 (2-107)||(16385889-16385994)
chr7 (2-244)||(9751181-9751423)
chr7 (2-106)||(12699218-12699322)
chr7 (2-107)||(40443762-40443867)
chr7 (2-246)||(15754518-15754763)
chr7 (2-248)||(34201028-34201273)
chr7 (2-107)||(27847475-27847580)
chr7 (2-101)||(2831937-2832036)
chr7 (2-81)||(11995689-11995768)
chr7 (2-106)||(18302564-18302668)
chr7 (2-244)||(39267277-39267519)
chr7 (138-248)||(15116725-15116835)
chr7 (139-248)||(12901573-12901682)
chr7 (2-107)||(26212370-26212475)
chr7 (140-248)||(15113188-15113296)
chr7 (35-129)||(14045187-14045281)
chr7 (35-129)||(14355217-14355311)
chr7 (35-128)||(1867650-1867743)
chr7 (45-129)||(12901768-12901852)
chr7 (3-55)||(18154469-18154521)
chr7 (185-248)||(11995843-11995906)
chr7 (34-100)||(9177252-9177318)
chr7 (35-129)||(14036637-14036731)
chr7 (35-129)||(14346667-14346761)
chr7 (137-246)||(20219955-20220063)
chr7 (26-127)||(2529632-2529733)
chr7 (2-55)||(19649116-19649169)
chr7 (2-74)||(24054884-24054956)
chr7 (4-75)||(2760542-2760613)
chr7 (4-75)||(3272202-3272273)
chr7 (137-202)||(15008263-15008328)
chr7 (185-244)||(2529866-2529926)
chr7 (32-171)||(35366546-35366684)
chr7 (13-55)||(10508725-10508767)
chr7 (34-100)||(11768526-11768592)
chr7 (34-100)||(17017054-17017120)
chr7 (13-74)||(11880668-11880729)
chr7 (13-53)||(9703703-9703743)
chr7 (34-126)||(15008107-15008199)
chr7 (139-202)||(1867808-1867871)
chr7 (34-100)||(16092185-16092251)
chr7 (138-171)||(9177431-9177464)
chr7 (3-40)||(14194729-14194766)
chr7 (136-185)||(26212302-26212351)
chr7 (13-53)||(12187450-12187490)
chr7 (13-53)||(12321385-12321425)
chr7 (9-53)||(14430315-14430359)
chr7 (13-53)||(17137706-17137746)
[»] chr3 (86 HSPs)
chr3 (34-246)||(324481-324693)
chr3 (3-248)||(14234734-14234979)
chr3 (1-248)||(16097573-16097821)
chr3 (3-248)||(15471168-15471413)
chr3 (3-248)||(1465041-1465287)
chr3 (1-248)||(32307912-32308159)
chr3 (1-248)||(12933940-12934188)
chr3 (2-196)||(17247917-17248111)
chr3 (1-248)||(49667714-49667961)
chr3 (2-202)||(53070330-53070528)
chr3 (26-196)||(2050856-2051024)
chr3 (1-248)||(1644313-1644560)
chr3 (34-196)||(52523390-52523552)
chr3 (2-205)||(40213352-40213555)
chr3 (1-171)||(49389274-49389443)
chr3 (4-248)||(16104024-16104268)
chr3 (2-205)||(14973141-14973344)
chr3 (1-248)||(9513152-9513401)
chr3 (1-248)||(9521127-9521376)
chr3 (4-248)||(12171750-12171982)
chr3 (2-205)||(25476016-25476219)
chr3 (2-244)||(11424394-11424635)
chr3 (2-207)||(18438819-18439024)
chr3 (2-207)||(26687171-26687377)
chr3 (2-246)||(13209959-13210203)
chr3 (13-244)||(14572837-14573067)
chr3 (137-248)||(37250932-37251043)
chr3 (2-100)||(14179714-14179812)
chr3 (8-244)||(42386660-42386895)
chr3 (2-244)||(12340000-12340242)
chr3 (2-107)||(20698078-20698183)
chr3 (2-90)||(17247151-17247239)
chr3 (2-98)||(43842572-43842668)
chr3 (2-106)||(14576464-14576568)
chr3 (2-244)||(14669008-14669250)
chr3 (2-106)||(17488243-17488347)
chr3 (2-106)||(17499725-17499829)
chr3 (12-244)||(14665853-14666085)
chr3 (12-244)||(14735366-14735598)
chr3 (2-79)||(12399608-12399685)
chr3 (1-171)||(23082991-23083162)
chr3 (2-107)||(30030213-30030318)
chr3 (13-101)||(4588457-4588545)
chr3 (26-129)||(605946-606049)
chr3 (42-204)||(13442561-13442724)
chr3 (2-99)||(12851995-12852092)
chr3 (137-246)||(22110116-22110225)
chr3 (26-127)||(23275106-23275207)
chr3 (2-107)||(16809774-16809875)
chr3 (34-101)||(22109938-22110005)
chr3 (34-129)||(43927543-43927638)
chr3 (32-129)||(12378359-12378456)
chr3 (26-127)||(14501564-14501665)
chr3 (2-55)||(15877460-15877513)
chr3 (26-127)||(23412828-23412929)
chr3 (142-246)||(43927380-43927484)
chr3 (34-96)||(316592-316654)
chr3 (34-128)||(37250775-37250869)
chr3 (4-53)||(17674209-17674258)
chr3 (34-127)||(45797608-45797701)
chr3 (34-126)||(21837866-21837958)
chr3 (186-244)||(4588602-4588661)
chr3 (34-100)||(9578070-9578136)
chr3 (4-53)||(3402600-3402649)
chr3 (196-248)||(49389453-49389506)
chr3 (13-53)||(321657-321697)
chr3 (13-53)||(12173221-12173261)
chr3 (9-53)||(12496690-12496734)
chr3 (9-53)||(15060727-15060771)
chr3 (13-53)||(17524817-17524857)
chr3 (9-53)||(18383556-18383600)
chr3 (201-244)||(14501371-14501414)
chr3 (136-242)||(43841183-43841287)
chr3 (9-51)||(323026-323068)
chr3 (37-171)||(603306-603440)
chr3 (4-53)||(11852006-11852055)
chr3 (4-53)||(19725546-19725595)
chr3 (5-49)||(1982456-1982500)
chr3 (13-53)||(3389600-3389640)
chr3 (13-53)||(11298172-11298212)
chr3 (3-55)||(12037586-12037638)
chr3 (13-53)||(14878148-14878188)
chr3 (9-53)||(15051951-15051995)
chr3 (139-171)||(16839439-16839471)
chr3 (136-204)||(20698202-20698270)
chr3 (13-53)||(26190652-26190692)
[»] chr4 (65 HSPs)
chr4 (3-248)||(15099593-15099839)
chr4 (3-248)||(39705920-39706165)
chr4 (1-244)||(8846621-8846866)
chr4 (32-248)||(15190560-15190777)
chr4 (34-196)||(52242856-52243018)
chr4 (1-248)||(12774242-12774489)
chr4 (4-202)||(15464562-15464760)
chr4 (2-196)||(44928554-44928748)
chr4 (3-164)||(43198220-43198381)
chr4 (3-171)||(13844860-13845028)
chr4 (4-202)||(21814936-21815132)
chr4 (4-202)||(21815265-21815461)
chr4 (4-202)||(21818358-21818554)
chr4 (2-205)||(14038935-14039139)
chr4 (2-205)||(15091183-15091387)
chr4 (2-244)||(24028989-24029231)
chr4 (2-205)||(16377153-16377356)
chr4 (4-194)||(44102508-44102697)
chr4 (2-106)||(16239623-16239728)
chr4 (2-107)||(3097017-3097122)
chr4 (2-107)||(7089251-7089356)
chr4 (2-107)||(12903131-12903235)
chr4 (9-248)||(16596890-16597128)
chr4 (12-106)||(6190819-6190913)
chr4 (2-106)||(15552199-15552303)
chr4 (2-244)||(20156921-20157163)
chr4 (2-204)||(44053116-44053319)
chr4 (2-244)||(22633844-22634086)
chr4 (6-100)||(14052948-14053042)
chr4 (2-207)||(22636718-22636924)
chr4 (2-106)||(7799083-7799187)
chr4 (2-244)||(13812440-13812682)
chr4 (13-100)||(17047726-17047813)
chr4 (26-127)||(15868290-15868391)
chr4 (197-243)||(43198380-43198426)
chr4 (32-129)||(12287794-12287891)
chr4 (139-246)||(46640223-46640330)
chr4 (34-128)||(53081760-53081854)
chr4 (34-114)||(13436-13516)
chr4 (137-248)||(53081915-53082026)
chr4 (26-127)||(32851816-32851917)
chr4 (185-248)||(15552058-15552121)
chr4 (34-128)||(17333721-17333815)
chr4 (34-129)||(46640043-46640138)
chr4 (34-100)||(32306582-32306648)
chr4 (13-74)||(44676047-44676108)
chr4 (186-233)||(3332144-3332192)
chr4 (136-204)||(12903044-12903112)
chr4 (13-53)||(13569948-13569988)
chr4 (136-204)||(14053068-14053136)
chr4 (13-53)||(15094209-15094249)
chr4 (13-53)||(15121446-15121486)
chr4 (9-53)||(16348331-16348375)
chr4 (43-87)||(17046721-17046765)
chr4 (13-53)||(23843915-23843955)
chr4 (138-248)||(13616-13726)
chr4 (34-100)||(152537-152603)
chr4 (137-171)||(12287974-12288008)
chr4 (34-100)||(15792243-15792309)
chr4 (34-100)||(26789806-26789872)
chr4 (136-201)||(17047838-17047903)
chr4 (136-204)||(3096930-3096998)
chr4 (136-204)||(7089164-7089232)
chr4 (13-53)||(12570457-12570497)
chr4 (13-53)||(16356596-16356636)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-248)||(373-621)
[»] scaffold0010 (3 HSPs)
scaffold0010 (1-248)||(130150-130398)
scaffold0010 (137-194)||(60479-60536)
scaffold0010 (34-129)||(60301-60396)
[»] scaffold0507 (1 HSPs)
scaffold0507 (26-248)||(7712-7934)
[»] scaffold0333 (2 HSPs)
scaffold0333 (3-244)||(6860-7102)
scaffold0333 (3-244)||(14240-14482)
[»] scaffold0034 (2 HSPs)
scaffold0034 (34-248)||(32780-32994)
scaffold0034 (4-204)||(51517-51718)
[»] scaffold0020 (2 HSPs)
scaffold0020 (3-248)||(15462-15708)
scaffold0020 (3-55)||(179086-179138)
[»] chr6 (67 HSPs)
chr6 (1-248)||(19652438-19652686)
chr6 (3-248)||(23019651-23019896)
chr6 (3-248)||(27332916-27333161)
chr6 (3-248)||(27393656-27393901)
chr6 (13-248)||(4667855-4668090)
chr6 (3-244)||(25644571-25644811)
chr6 (13-248)||(4674702-4674937)
chr6 (2-248)||(29808514-29808761)
chr6 (13-248)||(4185465-4185700)
chr6 (13-245)||(4189203-4189435)
chr6 (2-248)||(28496104-28496350)
chr6 (4-202)||(18457006-18457202)
chr6 (2-205)||(19303172-19303375)
chr6 (3-171)||(25956253-25956421)
chr6 (2-248)||(22080368-22080615)
chr6 (3-205)||(18409459-18409661)
chr6 (7-205)||(29060827-29061025)
chr6 (2-107)||(20637925-20638030)
chr6 (2-106)||(22779858-22779962)
chr6 (2-107)||(20360602-20360707)
chr6 (2-106)||(1561689-1561793)
chr6 (137-248)||(19668617-19668728)
chr6 (4-107)||(18821463-18821566)
chr6 (2-205)||(20594060-20594263)
chr6 (13-245)||(31155040-31155272)
chr6 (2-106)||(17287427-17287531)
chr6 (2-205)||(25628986-25629189)
chr6 (2-107)||(16920275-16920380)
chr6 (2-98)||(21939777-21939873)
chr6 (2-106)||(25611354-25611458)
chr6 (186-246)||(1561548-1561609)
chr6 (2-106)||(15894061-15894165)
chr6 (2-106)||(22334513-22334617)
chr6 (2-64)||(22439227-22439289)
chr6 (2-55)||(19863414-19863467)
chr6 (2-107)||(22831876-22831981)
chr6 (137-248)||(9098290-9098401)
chr6 (34-101)||(20109606-20109673)
chr6 (34-100)||(35008618-35008684)
chr6 (2-107)||(11185876-11185981)
chr6 (4-53)||(18180925-18180974)
chr6 (32-128)||(19668812-19668908)
chr6 (2-74)||(22432667-22432739)
chr6 (2-74)||(25641815-25641887)
chr6 (137-248)||(20109386-20109496)
chr6 (139-174)||(23077050-23077085)
chr6 (139-246)||(35008397-35008503)
chr6 (34-100)||(17106180-17106246)
chr6 (34-100)||(20224412-20224478)
chr6 (34-100)||(22118396-22118462)
chr6 (34-96)||(33443517-33443579)
chr6 (136-185)||(16920399-16920448)
chr6 (34-127)||(19023814-19023907)
chr6 (4-68)||(15041184-15041248)
chr6 (13-53)||(21739665-21739705)
chr6 (139-174)||(9622186-9622221)
chr6 (41-100)||(18696955-18697014)
chr6 (136-207)||(20360726-20360797)
chr6 (2-77)||(25603016-25603091)
chr6 (2-49)||(27415585-27415632)
chr6 (2-97)||(31164489-31164584)
chr6 (34-128)||(9098112-9098206)
chr6 (34-100)||(23539386-23539452)
chr6 (9-53)||(16523042-16523086)
chr6 (136-204)||(18821585-18821653)
chr6 (34-129)||(19362863-19362958)
chr6 (13-53)||(21834533-21834573)
[»] scaffold0102 (2 HSPs)
scaffold0102 (2-248)||(19509-19756)
scaffold0102 (1-74)||(48091-48164)
[»] chr8 (79 HSPs)
chr8 (3-248)||(38854883-38855128)
chr8 (1-245)||(21673951-21674196)
chr8 (1-248)||(26355328-26355576)
chr8 (3-228)||(39834095-39834321)
chr8 (3-248)||(6520612-6520857)
chr8 (8-248)||(23760477-23760717)
chr8 (103-248)||(21285842-21285987)
chr8 (2-171)||(19801058-19801227)
chr8 (3-196)||(41598480-41598673)
chr8 (2-207)||(23406665-23406871)
chr8 (2-248)||(5865908-5866153)
chr8 (2-205)||(6759543-6759747)
chr8 (2-204)||(18878868-18879071)
chr8 (2-248)||(17141158-17141403)
chr8 (2-205)||(28648675-28648878)
chr8 (2-205)||(16091972-16092175)
chr8 (2-244)||(18818041-18818281)
chr8 (2-101)||(22627126-22627225)
chr8 (2-205)||(22875352-22875555)
chr8 (4-106)||(7373135-7373237)
chr8 (2-207)||(21923559-21923765)
chr8 (2-101)||(21491383-21491482)
chr8 (2-207)||(20536492-20536698)
chr8 (2-107)||(45130662-45130767)
chr8 (2-248)||(21249626-21249871)
chr8 (2-248)||(21255464-21255709)
chr8 (2-106)||(21918641-21918745)
chr8 (2-107)||(31971629-31971734)
chr8 (13-97)||(23648948-23649032)
chr8 (2-101)||(16199289-16199388)
chr8 (2-100)||(21414858-21414956)
chr8 (13-107)||(25362793-25362887)
chr8 (3-128)||(20499024-20499149)
chr8 (141-248)||(20498808-20498915)
chr8 (34-101)||(17266579-17266646)
chr8 (26-127)||(13507664-13507765)
chr8 (26-127)||(13597196-13597297)
chr8 (34-129)||(982989-983084)
chr8 (34-129)||(17439092-17439187)
chr8 (42-129)||(24353463-24353550)
chr8 (34-101)||(37116815-37116882)
chr8 (196-246)||(22364909-22364959)
chr8 (188-246)||(24353271-24353329)
chr8 (4-53)||(16409889-16409938)
chr8 (4-53)||(16860971-16861020)
chr8 (137-246)||(17266757-17266866)
chr8 (2-55)||(21389084-21389137)
chr8 (34-129)||(40492438-40492534)
chr8 (185-248)||(21491237-21491300)
chr8 (34-100)||(16799958-16800024)
chr8 (34-100)||(22996313-22996379)
chr8 (137-171)||(37116670-37116704)
chr8 (4-53)||(16411903-16411952)
chr8 (13-74)||(19899510-19899571)
chr8 (9-53)||(15602656-15602700)
chr8 (9-53)||(15611108-15611152)
chr8 (13-53)||(30642934-30642974)
chr8 (34-101)||(2418462-2418529)
chr8 (137-171)||(983167-983201)
chr8 (42-76)||(17085770-17085804)
chr8 (13-55)||(17353580-17353622)
chr8 (34-100)||(19154472-19154538)
chr8 (13-74)||(19976860-19976921)
chr8 (13-74)||(19983508-19983569)
chr8 (4-53)||(20856059-20856108)
chr8 (13-53)||(377714-377754)
chr8 (13-53)||(16185164-16185204)
chr8 (13-53)||(20465682-20465722)
chr8 (13-53)||(21161758-21161798)
chr8 (13-53)||(21168364-21168404)
chr8 (136-204)||(21918766-21918834)
chr8 (139-171)||(21967336-21967368)
chr8 (139-171)||(21980061-21980093)
chr8 (139-171)||(21985044-21985076)
chr8 (139-171)||(22000081-22000113)
chr8 (140-244)||(23648802-23648905)
chr8 (13-53)||(24756157-24756197)
chr8 (34-101)||(37116087-37116155)
chr8 (139-171)||(44493455-44493487)
[»] scaffold0810 (1 HSPs)
scaffold0810 (4-228)||(3195-3420)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-248)||(45419-45668)
[»] scaffold0001 (4 HSPs)
scaffold0001 (4-248)||(160928-161173)
scaffold0001 (34-76)||(446965-447007)
scaffold0001 (34-76)||(497896-497938)
scaffold0001 (139-171)||(162867-162899)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-248)||(132896-133144)
[»] scaffold0243 (1 HSPs)
scaffold0243 (3-248)||(5754-5999)
[»] scaffold0211 (1 HSPs)
scaffold0211 (1-248)||(28439-28687)
[»] scaffold0207 (1 HSPs)
scaffold0207 (4-248)||(2277-2521)
[»] scaffold0530 (1 HSPs)
scaffold0530 (3-248)||(660-911)
[»] chr2 (53 HSPs)
chr2 (4-233)||(23708252-23708479)
chr2 (1-248)||(22133847-22134093)
chr2 (3-202)||(25176132-25176331)
chr2 (2-207)||(23660307-23660512)
chr2 (35-248)||(28406222-28406436)
chr2 (2-244)||(23076691-23076930)
chr2 (2-204)||(298446-298648)
chr2 (137-248)||(23207523-23207634)
chr2 (2-204)||(27753862-27754065)
chr2 (2-207)||(22337400-22337605)
chr2 (2-207)||(22737811-22738017)
chr2 (4-204)||(32451562-32451763)
chr2 (4-207)||(22730866-22731070)
chr2 (2-100)||(23286242-23286340)
chr2 (2-107)||(23654041-23654146)
chr2 (2-96)||(28291933-28292027)
chr2 (2-107)||(20309479-20309584)
chr2 (4-107)||(37760-37863)
chr2 (26-248)||(23071618-23071839)
chr2 (138-244)||(22459327-22459433)
chr2 (34-129)||(22412722-22412817)
chr2 (34-129)||(23207717-23207812)
chr2 (139-248)||(7499-7608)
chr2 (139-248)||(23791520-23791629)
chr2 (34-100)||(23005197-23005263)
chr2 (137-202)||(20519957-20520022)
chr2 (137-190)||(22412900-22412953)
chr2 (2-55)||(23100862-23100915)
chr2 (45-129)||(20519790-20519874)
chr2 (34-129)||(18786471-18786566)
chr2 (137-248)||(18786667-18786778)
chr2 (196-246)||(25109136-25109186)
chr2 (34-80)||(39827602-39827648)
chr2 (17-74)||(22740607-22740664)
chr2 (17-74)||(22758362-22758419)
chr2 (6-55)||(23038469-23038518)
chr2 (13-53)||(22798769-22798809)
chr2 (9-53)||(25963356-25963400)
chr2 (13-53)||(45677798-45677838)
chr2 (26-101)||(7331-7406)
chr2 (26-101)||(19672293-19672368)
chr2 (34-100)||(18546551-18546617)
chr2 (45-127)||(25109330-25109412)
chr2 (34-76)||(34137412-34137454)
chr2 (137-186)||(3539215-3539264)
chr2 (4-53)||(22811568-22811617)
chr2 (137-246)||(23004997-23005105)
chr2 (13-74)||(24658055-24658116)
chr2 (4-53)||(24716175-24716224)
chr2 (13-50)||(40621851-40621888)
chr2 (9-53)||(21917955-21917999)
chr2 (37-101)||(22459151-22459215)
chr2 (9-53)||(37525100-37525144)
[»] scaffold0475 (1 HSPs)
scaffold0475 (13-248)||(9320-9555)
[»] scaffold0621 (3 HSPs)
scaffold0621 (1-248)||(6779-7027)
scaffold0621 (138-248)||(8714-8824)
scaffold0621 (26-126)||(8911-9011)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-235)||(32339-32574)
[»] scaffold0628 (1 HSPs)
scaffold0628 (1-248)||(2433-2680)
[»] scaffold1137 (1 HSPs)
scaffold1137 (4-248)||(1934-2179)
[»] scaffold0116 (2 HSPs)
scaffold0116 (26-171)||(43439-43584)
scaffold0116 (26-171)||(47359-47504)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-248)||(101638-101885)
scaffold0023 (63-248)||(39864-40050)
scaffold0023 (1-55)||(39639-39693)
scaffold0023 (185-248)||(100619-100683)
[»] scaffold0627 (1 HSPs)
scaffold0627 (2-205)||(191-394)
[»] scaffold0021 (7 HSPs)
scaffold0021 (1-140)||(62913-63052)
scaffold0021 (137-248)||(136132-136243)
scaffold0021 (137-248)||(144840-144951)
scaffold0021 (2-93)||(124981-125072)
scaffold0021 (45-129)||(135965-136049)
scaffold0021 (45-129)||(144673-144757)
scaffold0021 (2-54)||(175202-175254)
[»] scaffold0031 (2 HSPs)
scaffold0031 (2-202)||(20057-20255)
scaffold0031 (2-55)||(65425-65478)
[»] scaffold0839 (1 HSPs)
scaffold0839 (12-196)||(1719-1902)
[»] scaffold0555 (3 HSPs)
scaffold0555 (114-248)||(10283-10417)
scaffold0555 (3-92)||(10200-10289)
scaffold0555 (2-77)||(994-1069)
[»] scaffold0503 (1 HSPs)
scaffold0503 (4-244)||(12178-12416)
[»] scaffold0278 (2 HSPs)
scaffold0278 (1-121)||(5964-6084)
scaffold0278 (184-248)||(5887-5952)
[»] scaffold0228 (4 HSPs)
scaffold0228 (2-169)||(4830-4998)
scaffold0228 (2-169)||(12412-12580)
scaffold0228 (2-169)||(22364-22532)
scaffold0228 (13-53)||(18286-18326)
[»] scaffold0122 (2 HSPs)
scaffold0122 (13-205)||(25707-25899)
scaffold0122 (2-201)||(33125-33325)
[»] scaffold0218 (2 HSPs)
scaffold0218 (137-248)||(7841-7952)
scaffold0218 (2-248)||(28911-29156)
[»] scaffold0142 (1 HSPs)
scaffold0142 (4-194)||(17078-17268)
[»] scaffold0120 (3 HSPs)
scaffold0120 (2-205)||(32590-32793)
scaffold0120 (2-205)||(46212-46415)
scaffold0120 (12-106)||(16473-16566)
[»] scaffold0413 (3 HSPs)
scaffold0413 (2-171)||(15246-15415)
scaffold0413 (137-248)||(12813-12924)
scaffold0413 (34-129)||(13007-13102)
[»] scaffold0145 (1 HSPs)
scaffold0145 (2-244)||(39009-39249)
[»] scaffold0016 (3 HSPs)
scaffold0016 (2-171)||(2171-2341)
scaffold0016 (13-244)||(207161-207392)
scaffold0016 (34-100)||(119214-119280)
[»] scaffold0292 (2 HSPs)
scaffold0292 (2-207)||(627-832)
scaffold0292 (2-184)||(3777-3960)
[»] scaffold0217 (1 HSPs)
scaffold0217 (2-202)||(16230-16431)
[»] scaffold0305 (1 HSPs)
scaffold0305 (2-204)||(20690-20893)
[»] scaffold0080 (2 HSPs)
scaffold0080 (2-206)||(40198-40401)
scaffold0080 (137-248)||(19649-19760)
[»] scaffold0395 (2 HSPs)
scaffold0395 (2-101)||(593-692)
scaffold0395 (2-167)||(8123-8288)
[»] scaffold0261 (3 HSPs)
scaffold0261 (2-248)||(15903-16148)
scaffold0261 (2-55)||(1774-1827)
scaffold0261 (26-126)||(17921-18021)
[»] scaffold0175 (2 HSPs)
scaffold0175 (2-248)||(34365-34610)
scaffold0175 (2-244)||(13341-13582)
[»] scaffold0003 (2 HSPs)
scaffold0003 (2-207)||(339582-339787)
scaffold0003 (2-49)||(71729-71776)
[»] scaffold0011 (4 HSPs)
scaffold0011 (12-207)||(52196-52392)
scaffold0011 (2-101)||(167621-167720)
scaffold0011 (34-100)||(37740-37806)
scaffold0011 (136-204)||(167745-167813)
[»] scaffold0161 (1 HSPs)
scaffold0161 (2-248)||(2076-2321)
[»] scaffold0075 (3 HSPs)
scaffold0075 (2-244)||(7925-8167)
scaffold0075 (34-114)||(53134-53214)
scaffold0075 (138-248)||(53314-53424)
[»] scaffold0042 (2 HSPs)
scaffold0042 (2-204)||(23933-24135)
scaffold0042 (13-53)||(34553-34593)
[»] scaffold0100 (1 HSPs)
scaffold0100 (2-171)||(20433-20602)
[»] scaffold0358 (4 HSPs)
scaffold0358 (2-99)||(318-415)
scaffold0358 (2-99)||(5094-5191)
scaffold0358 (136-184)||(243-291)
scaffold0358 (136-184)||(5019-5067)
[»] scaffold0320 (1 HSPs)
scaffold0320 (34-159)||(12329-12453)
[»] scaffold0056 (3 HSPs)
scaffold0056 (13-185)||(16857-17029)
scaffold0056 (2-101)||(78993-79092)
scaffold0056 (4-53)||(13711-13760)
[»] scaffold0876 (1 HSPs)
scaffold0876 (2-106)||(2716-2820)
[»] scaffold0647 (1 HSPs)
scaffold0647 (2-204)||(5752-5955)
[»] scaffold0389 (1 HSPs)
scaffold0389 (2-98)||(13239-13335)
[»] scaffold1842 (2 HSPs)
scaffold1842 (2-101)||(691-790)
scaffold1842 (136-204)||(815-883)
[»] scaffold0130 (2 HSPs)
scaffold0130 (2-101)||(28927-29026)
scaffold0130 (36-129)||(1368-1461)
[»] scaffold0012 (1 HSPs)
scaffold0012 (42-133)||(227851-227942)
[»] scaffold0121 (1 HSPs)
scaffold0121 (2-207)||(8164-8369)
[»] scaffold0718 (1 HSPs)
scaffold0718 (2-107)||(4773-4878)
[»] scaffold0598 (2 HSPs)
scaffold0598 (2-107)||(694-799)
scaffold0598 (136-204)||(818-886)
[»] scaffold0456 (1 HSPs)
scaffold0456 (2-107)||(10068-10173)
[»] scaffold0427 (1 HSPs)
scaffold0427 (2-107)||(13869-13974)
[»] scaffold0231 (1 HSPs)
scaffold0231 (4-97)||(23277-23370)
[»] scaffold0026 (4 HSPs)
scaffold0026 (1-106)||(39561-39666)
scaffold0026 (2-106)||(40242-40346)
scaffold0026 (47-101)||(59179-59233)
scaffold0026 (57-106)||(26611-26660)
[»] scaffold1765 (1 HSPs)
scaffold1765 (184-248)||(1327-1391)
[»] scaffold0266 (1 HSPs)
scaffold0266 (2-106)||(18589-18693)
[»] scaffold0737 (2 HSPs)
scaffold0737 (137-248)||(1562-1673)
scaffold0737 (34-101)||(1384-1451)
[»] scaffold0040 (2 HSPs)
scaffold0040 (137-248)||(103403-103514)
scaffold0040 (32-129)||(103244-103341)
[»] scaffold0403 (1 HSPs)
scaffold0403 (2-107)||(5222-5327)
[»] scaffold0193 (1 HSPs)
scaffold0193 (2-107)||(13585-13690)
[»] scaffold0113 (1 HSPs)
scaffold0113 (2-107)||(32438-32543)
[»] scaffold0088 (1 HSPs)
scaffold0088 (2-107)||(21275-21380)
[»] scaffold0639 (1 HSPs)
scaffold0639 (2-244)||(8724-8965)
[»] scaffold0352 (1 HSPs)
scaffold0352 (2-101)||(17639-17738)
[»] scaffold0351 (1 HSPs)
scaffold0351 (2-101)||(16659-16758)
[»] scaffold0247 (1 HSPs)
scaffold0247 (2-100)||(6459-6557)
[»] scaffold0151 (1 HSPs)
scaffold0151 (2-96)||(10540-10634)
[»] scaffold0540 (1 HSPs)
scaffold0540 (2-99)||(644-741)
[»] scaffold0221 (1 HSPs)
scaffold0221 (2-106)||(12440-12544)
[»] scaffold0192 (1 HSPs)
scaffold0192 (2-244)||(10158-10400)
[»] scaffold0037 (2 HSPs)
scaffold0037 (2-244)||(79963-80205)
scaffold0037 (158-248)||(22459-22550)
[»] scaffold1257 (1 HSPs)
scaffold1257 (146-248)||(1991-2094)
[»] scaffold0070 (1 HSPs)
scaffold0070 (2-205)||(4810-5013)
[»] scaffold0235 (2 HSPs)
scaffold0235 (17-107)||(11170-11260)
scaffold0235 (26-127)||(14004-14105)
[»] scaffold0114 (2 HSPs)
scaffold0114 (2-108)||(15107-15213)
scaffold0114 (2-61)||(32907-32966)
[»] scaffold0490 (1 HSPs)
scaffold0490 (2-107)||(2326-2431)
[»] scaffold0064 (2 HSPs)
scaffold0064 (2-107)||(47360-47465)
scaffold0064 (13-53)||(64306-64346)
[»] scaffold0022 (5 HSPs)
scaffold0022 (34-129)||(80701-80796)
scaffold0022 (137-173)||(80582-80618)
scaffold0022 (34-129)||(128557-128652)
scaffold0022 (196-246)||(78569-78619)
scaffold0022 (137-171)||(128735-128769)
[»] scaffold0586 (1 HSPs)
scaffold0586 (2-100)||(2245-2343)
[»] scaffold0484 (1 HSPs)
scaffold0484 (13-107)||(1288-1382)
[»] scaffold0347 (1 HSPs)
scaffold0347 (2-232)||(288-517)
[»] scaffold0165 (4 HSPs)
scaffold0165 (13-107)||(3855-3949)
scaffold0165 (13-107)||(7919-8013)
scaffold0165 (34-129)||(27305-27400)
scaffold0165 (138-171)||(27485-27518)
[»] scaffold0309 (1 HSPs)
scaffold0309 (2-107)||(6984-7089)
[»] scaffold0166 (1 HSPs)
scaffold0166 (2-244)||(9465-9707)
[»] scaffold0476 (5 HSPs)
scaffold0476 (138-248)||(13011-13122)
scaffold0476 (34-101)||(13234-13301)
scaffold0476 (3-101)||(8193-8290)
scaffold0476 (13-53)||(6018-6058)
scaffold0476 (13-53)||(7213-7253)
[»] scaffold0357 (4 HSPs)
scaffold0357 (34-129)||(13570-13665)
scaffold0357 (139-202)||(15866-15929)
scaffold0357 (32-129)||(3133-3230)
scaffold0357 (141-242)||(13381-13482)
[»] scaffold0123 (2 HSPs)
scaffold0123 (34-129)||(25545-25640)
scaffold0123 (196-246)||(25353-25403)
[»] scaffold0076 (1 HSPs)
scaffold0076 (33-119)||(24182-24268)
[»] scaffold0032 (1 HSPs)
scaffold0032 (2-107)||(51953-52058)
[»] scaffold0198 (1 HSPs)
scaffold0198 (3-55)||(26835-26887)
[»] scaffold0167 (1 HSPs)
scaffold0167 (3-55)||(36024-36076)
[»] scaffold0131 (1 HSPs)
scaffold0131 (3-55)||(36892-36944)
[»] scaffold0423 (1 HSPs)
scaffold0423 (2-69)||(10903-10970)
[»] scaffold0084 (1 HSPs)
scaffold0084 (2-81)||(10569-10648)
[»] scaffold0008 (2 HSPs)
scaffold0008 (182-248)||(14506-14573)
scaffold0008 (4-53)||(30379-30428)
[»] scaffold1351 (2 HSPs)
scaffold1351 (137-246)||(253-362)
scaffold1351 (37-129)||(445-537)
[»] scaffold0601 (1 HSPs)
scaffold0601 (34-127)||(7095-7188)
[»] scaffold0124 (1 HSPs)
scaffold0124 (13-101)||(24293-24381)
[»] scaffold0005 (2 HSPs)
scaffold0005 (34-126)||(268094-268186)
scaffold0005 (137-235)||(267909-268007)
[»] scaffold0139 (3 HSPs)
scaffold0139 (139-246)||(38565-38672)
scaffold0139 (2-54)||(20418-20470)
scaffold0139 (32-114)||(38751-38833)
[»] scaffold1403 (2 HSPs)
scaffold1403 (196-246)||(796-846)
scaffold1403 (41-126)||(992-1076)
[»] scaffold0004 (2 HSPs)
scaffold0004 (34-100)||(332784-332850)
scaffold0004 (13-74)||(70211-70272)
[»] scaffold0420 (1 HSPs)
scaffold0420 (190-246)||(6100-6156)
[»] scaffold2044 (1 HSPs)
scaffold2044 (2-49)||(1087-1134)
[»] scaffold0098 (3 HSPs)
scaffold0098 (26-97)||(29156-29227)
scaffold0098 (139-171)||(24534-24566)
scaffold0098 (139-171)||(35404-35436)
[»] scaffold1895 (1 HSPs)
scaffold1895 (13-55)||(891-933)
[»] scaffold0210 (2 HSPs)
scaffold0210 (13-55)||(21449-21491)
scaffold0210 (13-55)||(29341-29383)
[»] scaffold0109 (2 HSPs)
scaffold0109 (26-95)||(35525-35594)
scaffold0109 (4-49)||(45534-45579)
[»] scaffold0079 (1 HSPs)
scaffold0079 (4-53)||(44486-44535)
[»] scaffold0046 (2 HSPs)
scaffold0046 (2-55)||(14914-14967)
scaffold0046 (185-248)||(11534-11598)
[»] scaffold0043 (1 HSPs)
scaffold0043 (8-53)||(18676-18721)
[»] scaffold0393 (1 HSPs)
scaffold0393 (9-53)||(1926-1970)
[»] scaffold0324 (1 HSPs)
scaffold0324 (13-53)||(15837-15877)
[»] scaffold0311 (1 HSPs)
scaffold0311 (13-53)||(6721-6761)
[»] scaffold0006 (4 HSPs)
scaffold0006 (139-171)||(97327-97359)
scaffold0006 (139-171)||(106605-106637)
scaffold0006 (197-246)||(97253-97302)
scaffold0006 (197-246)||(106531-106580)
[»] scaffold0367 (1 HSPs)
scaffold0367 (10-53)||(1329-1372)
[»] scaffold0346 (1 HSPs)
scaffold0346 (2-49)||(17355-17402)
[»] scaffold0268 (1 HSPs)
scaffold0268 (26-97)||(590-661)
[»] scaffold0174 (1 HSPs)
scaffold0174 (10-53)||(18093-18136)
[»] scaffold0171 (1 HSPs)
scaffold0171 (4-75)||(35155-35226)
[»] scaffold0780 (1 HSPs)
scaffold0780 (34-100)||(2935-3001)
[»] scaffold0327 (1 HSPs)
scaffold0327 (13-75)||(680-742)
[»] scaffold0297 (1 HSPs)
scaffold0297 (13-51)||(10464-10502)
[»] scaffold0215 (1 HSPs)
scaffold0215 (13-55)||(27257-27299)
[»] scaffold0077 (1 HSPs)
scaffold0077 (34-76)||(55271-55313)
[»] scaffold1220 (1 HSPs)
scaffold1220 (4-49)||(2217-2262)
[»] scaffold0671 (1 HSPs)
scaffold0671 (4-49)||(6543-6588)
[»] scaffold0615 (1 HSPs)
scaffold0615 (4-53)||(1718-1767)
[»] scaffold0483 (1 HSPs)
scaffold0483 (4-49)||(747-792)
[»] scaffold0439 (2 HSPs)
scaffold0439 (4-49)||(2080-2125)
scaffold0439 (4-49)||(9940-9985)
[»] scaffold0280 (1 HSPs)
scaffold0280 (12-53)||(18944-18985)
[»] scaffold0141 (1 HSPs)
scaffold0141 (136-201)||(39767-39832)
[»] scaffold0106 (3 HSPs)
scaffold0106 (2-75)||(1692-1765)
scaffold0106 (2-75)||(7669-7742)
scaffold0106 (2-55)||(16084-16137)
[»] scaffold0049 (1 HSPs)
scaffold0049 (136-201)||(74980-75045)
[»] scaffold1296 (1 HSPs)
scaffold1296 (9-49)||(830-870)
[»] scaffold1048 (1 HSPs)
scaffold1048 (5-49)||(1853-1897)
[»] scaffold0676 (1 HSPs)
scaffold0676 (9-53)||(4863-4907)
[»] scaffold0412 (1 HSPs)
scaffold0412 (13-53)||(6059-6099)
[»] scaffold0301 (3 HSPs)
scaffold0301 (139-171)||(11937-11969)
scaffold0301 (139-171)||(15089-15121)
scaffold0301 (139-171)||(16337-16369)
[»] scaffold0293 (1 HSPs)
scaffold0293 (34-98)||(17953-18017)
[»] scaffold0273 (1 HSPs)
scaffold0273 (3-55)||(9070-9122)
[»] scaffold0158 (2 HSPs)
scaffold0158 (13-53)||(3275-3315)
scaffold0158 (13-53)||(6941-6981)
[»] scaffold0096 (1 HSPs)
scaffold0096 (13-53)||(15992-16032)
[»] scaffold0081 (1 HSPs)
scaffold0081 (13-53)||(15107-15147)
[»] scaffold0035 (1 HSPs)
scaffold0035 (13-53)||(46370-46410)
[»] scaffold0029 (1 HSPs)
scaffold0029 (13-53)||(13194-13234)
[»] scaffold0017 (2 HSPs)
scaffold0017 (13-53)||(190924-190964)
scaffold0017 (13-53)||(192627-192667)
[»] scaffold0015 (1 HSPs)
scaffold0015 (139-171)||(209245-209277)


Alignment Details
Target: scaffold0138 (Bit Score: 172; Significance: 2e-92; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 3 - 246
Target Start/End: Complemental strand, 13429 - 13186
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||| |||| ||||||||||||||||| ||| | ||||||||||     
T  13429 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaagattggagattaagattgaacct 13330  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||| || || || |||||||||||||||||||||    
T  13329 ggaatagtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtt 13230  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  13229 aggttaaatgtgatctttgtcacacgagttgatgtgagttgatc 13186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 18002 - 18111
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagtta--cagaatgccttgttaggttaaatgcgatctttgtcacacgagttga 234  Q
    ||||||||||||||||||||| ||||||||||||| || ||   || ||| |  |||||| ||||||||||||||||| || ||||||| ||||||||||    
T  18002 cctgaactcgccatagcgagtggaggctctcgcctcgcgagc--cctagtgagacagaataccttgttaggttaaatgtgacctttgtcgcacgagttga 18099  T
Q  235 tgtgagttgatc 246  Q
    |||||| |||||    
T  18100 tgtgagatgatc 18111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 17823 - 17888
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaa 99  Q
    ||||||| |||||| |||||||  ||||||||||||||||||| ||| || |||| |||| |||||    
T  17823 ttagatgattttgaatgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaa 17888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 165; Significance: 2e-88; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 33681500 - 33681252
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||| |||||||||||||||||||||| |||||||||||||||    
T  33681500 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagttcctgaatatgtctaataatgattaggaaagattggagaatgagattgaac 33681401  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| || | ||||||||||||||| |||||||    
T  33681400 ctggaaagattttagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacagagtgccttg 33681301  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33681300 cttatgttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 33681252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 22921499 - 22921745
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||||     
T  22921499 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacca 22921598  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| ||||||||| |||||  || |||||||||||| |||||||||||||||||||| || |  | || ||||||||||||||||| |    
T  22921599 ggaatagtttaagaacgaatttttgagagttagacttgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgtt 22921698  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||    
T  22921699 tgggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 22921745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 52927611 - 52927858
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||||| |||||||||||||||    
T  52927611 cagatttcgtaattttgacttttgagttgacccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagattggagaatgagattgaac 52927710  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   |||  ||||||||||||   ||||  ||||||||||||||| |||||||||||| ||||||| || | ||  |||||||||||||||||||    
T  52927711 ctggaaagattttggaatgaattttttaaagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttg 52927810  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52927811 ttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 52927858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 22238117 - 22237873
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||| |||| |    
T  22238117 atttcgtaattttgacttttgagttgatccttagatatttttgagtgcctgaacatgtctaataatggttaggaaagattggagaatgagattaaacctg 22238018  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-tt 202  Q
    |||   |||  ||||||| ||||| ||||||||| |||||||||||| |||||||||||| ||||||| || | ||  | ||||||||||||||||| ||    
T  22238017 gaaagattttggaatgaa-ttttgtgagttgcacttgaactcgccatggcgagtagaggccctcgcctcgcgaattgactagttacagaatgccttgttt 22237919  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  22237918 aggttaaatgcgatctttttcgcacgagttgatgtgagttgatctt 22237873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 20637339 - 20637093
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgttttt-gagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||||||||||| |||  ||||| |||| ||||||||| ||||||||   | |||||||| ||||||||||||||||| ||| | ||||||||||     
T  20637339 atttcgtaattttgacctttaagttgaaccttggatgttttttgagtgcctagacttgtataatgatgattaggaaagattggagattaagattgaacct 20637240  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||| || || ||  ||||||||||||| |||| |    
T  20637239 ggaatagtttaagaacgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaatcagttacagaatgtcttgtt 20637140  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||    
T  20637139 taggttaaaagcgatctttgtcgcatgagttgatgtgagttgatctt 20637093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 37 - 248
Target Start/End: Original strand, 35981352 - 35981564
Alignment:
Q  37 gatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagttgca 136  Q
    ||||||||||||||||||| | ||||| || ||||||||||||||||||||| |||||||||||| || |||||||||||| |||||| || ||||||||    
T  35981352 gatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacctgggatagtttaagaacgaatttatgtgagttgca 35981451  T
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgagttgat 235  Q
    |||||||||||||| | |||||||||||||||||| || || || | ||||||||||||||||| |||||||||| |||||||||||| ||||| |||||    
T  35981452 cctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgaattgat 35981551  T
Q  236 gtgagttgatctt 248  Q
    |||||||||||||    
T  35981552 gtgagttgatctt 35981564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 21754526 - 21754281
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| ||||||||||    
T  21754526 cagatttcgtatttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaaagagattgaac 21754427  T
Q  101 c-gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    | ||||| | ||| |||||||| ||||| ||  || ||||||||||||||| ||||| |||||||||||||| || |||       ||||||| ||||||    
T  21754426 ctgggaagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgttttacagactgcctt 21754329  T
Q  200 gttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatct 247  Q
    ||||||||||||| |||| ||||| |||||||||||||||||||||||    
T  21754328 gttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatct 21754281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 20248765 - 20248520
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    |||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||| |    
T  20248765 atttcgaaattttgacttttgagttgatccatagatgtttttgagtgcctgaacatgtctaataatgattaggaaagatcggagaatgagattgaacctg 20248666  T
Q  104 ga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt-gt 201  Q
    || | | ||| |||||||||||||| ||  || ||||||||||||||| ||||||||||||| |||||| || || || | ||||||||||||||||  |    
T  20248665 gagagacttt-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctatcgcctcgcgagctaactagttacagaatgccttatt 20248567  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||  ||||| ||| ||||||||| | ||||||||    
T  20248566 taggttaaatgcgattcttgtcgcacaagttgatgtaaattgatctt 20248520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 28194080 - 28194306
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||| ||| ||||||| |||  || || |||| ||||||||||||||||||| | ||||| || ||||||||||||||||||||| ||||||||||||     
T  28194080 gattttgtagttttgacctttaagtcgaaccttggatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacct 28194179  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    | |||||||||||||||||| |||| |||||||||||||||||||||| || ||||||||||||||||| || || |||||| ||||| |||| |||| |    
T  28194180 gaaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcaagtagaggctctcgcctcgcgagctacccatttacaaaatgtcttgtt 28194279  T
Q  202 taggttaaatgcgatctttgtcacacg 228  Q
    ||||||| |||||||||||||| ||||    
T  28194280 taggttacatgcgatctttgtcgcacg 28194306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 196
Target Start/End: Complemental strand, 433497 - 433303
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||| ||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||||| || |||||||||||||||| |||||||||||||||||||    
T  433497 agattccgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaacc 433398  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
     ||||   ||| ||||||||  ||||||| |   ||||||||||||||| ||||| |||||||||||||| || ||| |||||||| || |||||    
T  433397 tggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatgc 433303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 34510270 - 34510101
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  34510270 agatttcgtgattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 34510171  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
     ||||   ||  |||||||| |||||| | |   ||||||||||||||  ||||| ||||||||||||||    
T  34510170 tggaaagattgtagaatgaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcct 34510101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 43697849 - 43697712
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||| ||||| || | |||||||| ||||||| |||| ||||||| ||||     
T  43697849 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgcctgaacatgtctatttatgattagaaaagattctagattgagatttaacct 43697750  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctg 140  Q
    ||||||||||||||||| ||||| ||||||| ||||||    
T  43697749 ggaatagtttaagaatggattttcgggagttacacctg 43697712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 50209845 - 50210047
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||||| ||| |||  ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  50209845 agattttgtgattttgacttttgagttgatc-ttatatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 50209943  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||||| | |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  50209944 tggaa-agatttagaatgaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 50210042  T
Q  201 ttagg 205  Q
    |||||    
T  50210043 ttagg 50210047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 22532759 - 22532556
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| |||||||||||||  |||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22532759 agatttcgtgattttgacttttgatttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22532660  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  |||||||| |||||| | |   || |||||||||||  | ||| |||||||||||||| || ||| |||||   ||||| || |||||    
T  22532659 tggaaggattgtagaatgaacttttggaaatctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgt 22532560  T
Q  202 tagg 205  Q
    ||||    
T  22532559 tagg 22532556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 22355816 - 22355921
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22355816 agatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22355915  T
Q  102 gggaat 107  Q
     |||||    
T  22355916 tggaat 22355921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 22357502 - 22357607
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22357502 agatttcataattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22357601  T
Q  102 gggaat 107  Q
     |||||    
T  22357602 tggaat 22357607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 248
Target Start/End: Complemental strand, 20919083 - 20918846
Alignment:
Q  10 taattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatag 109  Q
    |||||||||| |||| ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||  ||| ||    
T  20919083 taattttgacctttgagttgatccttacatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc-tgaaaag 20918985  T
Q  110 tttaagaa-tgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggtta 208  Q
      | |||| | || ||| | || |   | ||||||||||||| ||||| |||||||||||||| || || |     |||| |||||||||| |||||||     
T  20918984 acttagaatttaaatttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcttgtgtgttaaagaatgcctttttaggttg 20918886  T
Q  209 aatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||   ||| ||||||||||||||||||    
T  20918885 aatgcgatctttgtcgttcgacttgatgtgagttgatctt 20918846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 143 - 248
Target Start/End: Complemental strand, 49261690 - 49261584
Alignment:
Q  143 ctcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagt 241  Q
    |||||||| |||| ||||||||||||||| || || || ||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||    
T  49261690 ctcgccatggcgaatagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgagttgatgtgagt 49261591  T
Q  242 tgatctt 248  Q
    |||||||    
T  49261590 tgatctt 49261584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 20846861 - 20846966
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| ||||||||||| |||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||| |||| ||||| |||||||||||||    
T  20846861 agattttgtaattttgacctttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacc 20846960  T
Q  102 gggaat 107  Q
     |||||    
T  20846961 tggaat 20846966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 27250371 - 27250476
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||| |||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||    
T  27250371 agatttcgtaatattgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgggattgaacc 27250470  T
Q  102 gggaat 107  Q
     |||||    
T  27250471 tggaat 27250476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 20135675 - 20135573
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||| ||| |    
T  20135675 attttgtaattttgacttttgagtttatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtaggatgagattggacctg 20135576  T
Q  104 gaa 106  Q
    |||    
T  20135575 gaa 20135573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 107
Target Start/End: Complemental strand, 21027152 - 21027054
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    ||||||||||| |||| ||||||||||||||| |||||||||| ||| ||||| |||||||||||||| |||| ||||| ||||||||||||| |||||    
T  21027152 gtaattttgacctttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggtaagaatgtaggatgagattgaacctggaat 21027054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 38801033 - 38801138
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| || |||||||||||| ||||| | |||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||| ||| |||||||||    
T  38801033 agatttcatatttttgacttttgagttgaactttagatgtctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgaacc 38801132  T
Q  102 gggaat 107  Q
     |||||    
T  38801133 tggaat 38801138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 21301169 - 21301245
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaa 78  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  21301169 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaa 21301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 22354203 - 22354409
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||| ||||| ||| |||||||||| ||| ||||| | ||||||||||||||| |  |||| |||||||||||||    
T  22354203 agattttgtgattttgacttttgagttgaaccttatatgcttttgagtgcttgaacatgtcttataatgattaggaaataacgtaggatgagattgaacc 22354302  T
Q  102 gggaatag-tttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     || |||| ||  |||||| || || ||||| |   ||||||||||||||  |||||||||||||||||||| || ||| ||||||  ||||| || |||    
T  22354303 tgg-atagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcaagtgacccagaaacagagtgactt 22354401  T
Q  200 gttaggtt 207  Q
    ||||||||    
T  22354402 gttaggtt 22354409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 12271902 - 12271792
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||| ||||||||||||||||||||||||| || |||      |  ||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  12271902 ctgaactctccatagcgagtagaggctctcgcctcgcgagtccttgtgagacagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgt 12271803  T
Q  238 gagttgatctt 248  Q
    |||||||||||    
T  12271802 gagttgatctt 12271792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 202
Target Start/End: Complemental strand, 26065295 - 26065230
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||| |||||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtt 26065230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 41049629 - 41049726
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||| ||| || |||| |||||||||||| || | ||||| | ||||||||||||||    
T  41049629 ccttagatgtttctgagtgcctgaacatgtataataatggttaggcaagtttttagattgagattgaacctgggaaagtttgaaaatgaatttttggg 41049726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 21861335 - 21861445
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||||||||||||||||||||| ||||||| ||  ||      |  ||||||||||||||||||||||||| ||  |||||| |||||||||||||    
T  21861335 ctgaactcgccatagcgagtagaggccctcgcctcgcgtgtccttgtgagacagaatgccttgttaggttaaatgtgacatttgtcgcacgagttgatgt 21861434  T
Q  238 gagttgatctt 248  Q
    |||||||||||    
T  21861435 gagttgatctt 21861445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 21861149 - 21861250
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||||| ||||||| || ||||||||||| || ||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||    
T  21861149 gttgatctttagatgattctgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttt 21861248  T
Q  126 tg 127  Q
    ||    
T  21861249 tg 21861250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 21715036 - 21714984
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  21715036 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 21714984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 21895887 - 21895975
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaa 114  Q
    ||||||| ||||||| || ||||||||||| || ||||||||||||||||||||| || |||| |||||||||||| || | |||||||    
T  21895887 gttgatctttagatgattatgagtgcctgaacaagtataataatgattaggaaagtttttagattgagattgaacctgggaaagtttaa 21895975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 21896078 - 21896134
Alignment:
Q  192 aatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||||||||| || ||||||| ||||||||||||||||||||||||    
T  21896078 aatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatctt 21896134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 26065441 - 26065357
Alignment:
Q  45 tgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  26065441 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 26065357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 16367873 - 16367968
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| ||||| |||||| |||| |||||||  ||| |||||||||    
T  16367873 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagaatgaacctggaaaagtttaaagatggatttttggg 16367968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 35260718 - 35260813
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| || ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| |  | ||||||| |||| |||||||||    
T  35260718 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 35260813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 16368051 - 16368160
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||||||| |||||||||||| || ||       |  ||||||  ||||||||||||||||| || ||||||| ||||||||||||    
T  16368051 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagcccttgtgagacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatg 16368150  T
Q  237 tgagttgatc 246  Q
    ||||||||||    
T  16368151 tgagttgatc 16368160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 16759186 - 16759117
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||||||||||||| | || ||||||||||||||||| ||| || |||| ||||||||||||    
T  16759186 ccttagatgtttttgagtgcctaaacacgtataataatgattaggcaagtttttagattgagattgaacc 16759117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 22468328 - 22468381
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  22468328 agatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctga 22468381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 21162207 - 21162119
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||| | ||| ||||| ||| ||||||||||||||  | || |||||| |||| ||||||| |||||||||||||||||||    
T  21162207 ttttgacttttgagatgacccttaaatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacc 21162119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 50686963 - 50686860
Alignment:
Q  143 ctcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagtt 242  Q
    ||||||||||||||||||||||||||||| || ||   |   |  ||||||| |||||||||| |||||| || ||||||| |||||||||| |||||||    
T  50686963 ctcgccatagcgagtagaggctctcgcctcgcgagcccctgtgagacagaataccttgttaggataaatgtgacctttgtcgcacgagttgacgtgagtt 50686864  T
Q  243 gatc 246  Q
    ||||    
T  50686863 gatc 50686860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 50687118 - 50687031
Alignment:
Q  42 ttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||||   ||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  50687118 ttttgagtgcctgtatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 50687031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 16381698 - 16381632
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||  ||||||||| |||||||||||||| || |||||||| |||||||    
T  16381698 ttagatggttttgagtgcctggacatgtataagaatgattaggaaagtttttagaatgaaattgaac 16381632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 27652808 - 27652874
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||| || |||| |||||||||||    
T  27652808 ttagatgtttttgagtgcctgaatatgcataataatgattaggcaagtttttagattgagattgaac 27652874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 48521102 - 48521036
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||| |||||  ||||||||||||||||||| ||| || |||| |||||||||||    
T  48521102 ttagatgtttttgagtacctgaatatgtataataatgattaggcaagtttttagattgagattgaac 48521036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Original strand, 16093479 - 16093572
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttg 127  Q
    ||||||| |||||||||||||   |||||||||||||||| || ||| || |||| |||||||||||| |||| |||| || |||| |||||||    
T  16093479 ttagatggttttgagtgcctggatatgtataataatgatttggcaagtttttagattgagattgaacctggaaaagttaaaaaatggatttttg 16093572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 50613701 - 50613794
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    |||| |||| |||||||||| |||  ||||||||||||||||||| ||| || |||| |||||||||||  || | ||||||| ||||||||||    
T  50613701 ccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50613794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 50621529 - 50621622
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    |||| |||| |||||||||| |||  ||||||||||||||||||| ||| || |||| |||||||||||  || | ||||||| ||||||||||    
T  50621529 ccttcgatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatgaatttt 50621622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 3472560 - 3472607
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgc 51  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  3472560 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgc 3472607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 21342614 - 21342539
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||| ||||||||| ||||||||| ||||  ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  21342614 gttgaaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacc 21342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 21347479 - 21347404
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||| ||||||||| ||||||||| ||||  ||||||||||||||||||| ||| || |||| ||||| ||||||    
T  21347479 gttgaaccttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagaatgaacc 21347404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 8761266 - 8761316
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||| |||||||| ||||| ||||||||| ||||||||||||    
T  8761266 gatttcgtaatttggacttttgagttgaaccttagatgcttttgagtgcct 8761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 24087870 - 24087736
Alignment:
Q  37 gatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagttgca 136  Q
    ||||||| |||| |||||| ||||||  |||||||||||| ||  || |||| |||||||||||  |||||||  | |||||| ||| ||| | |||  |    
T  24087870 gatgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagattgaactcggaatagagtcagaatggattcttgagtgtttta 24087771  T
Q  137 cctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||  |||||||| | ||||||||||||||||||||    
T  24087770 ccctaactcgccgtggcgagtagaggctctcgcct 24087736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 41049851 - 41049909
Alignment:
Q  188 acagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||| ||||||||||||| ||| || ||||||| || |||||||||||||||||||    
T  41049851 acagaataccttgttaggttatatgtgacctttgtcgcatgagttgatgtgagttgatc 41049909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 50613940 - 50613990
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||| || ||||||| ||||||||||||||| ||||||    
T  50613940 ccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatc 50613990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 50621768 - 50621818
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||| || ||||||| ||||||||||||||| ||||||    
T  50621768 ccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgaattgatc 50621818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 35260852 - 35260952
Alignment:
Q  144 tcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagtt 242  Q
    |||||||||||||||||||| ||||||| || |||| |||||||||| ||| ||||| ||||| |   ||||||||||||| |||||| || | ||||||    
T  35260852 tcgccatagcgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggat-tttgcgatctttgtcgcacgagatgttatgagtt 35260950  T
Q  243 ga 244  Q
    ||    
T  35260951 ga 35260952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 22432422 - 22432466
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  22432422 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 22432466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 22831021 - 22831061
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  22831021 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22831061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 42864854 - 42864894
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  42864854 ttttgacttttgagttgaaccttagatgtttttgagtgcct 42864894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 16381538 - 16381431
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    |||||||||||||| |||||||||||||||||| || |||  |  ||| ||||| |||||||||||| |    |||||  ||| |  |||||||||||||    
T  16381538 tgaactcgccatagggagtagaggctctcgcctcgcgagtccctgagtgacagactgccttgttagggttttagcgattcttggcgtacgagttgatgtg 16381439  T
Q  239 agttgatc 246  Q
    ||||||||    
T  16381438 agttgatc 16381431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 18181755 - 18181826
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    |||| ||| |||||||||||| ||||| ||||||||| |||||||||||| |  |||| || ||||||||||    
T  18181755 attttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgattag 18181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 20091105 - 20091180
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattagga 77  Q
    ||||||| || |||||||||||| ||| | |||||||||  ||||| ||||||| ||||| ||||| |||||||||    
T  20091105 agatttcttatttttgacttttgagttaaaccttagatgcctttgattgcctgaacatgtctaatattgattagga 20091180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 16759005 - 16758947
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    |||||||||||||||| ||||||||| ||| ||| || |||| || |||||||||||||    
T  16759005 ctgaactcgccatagcaagtagaggccctcacctcgcgagttgcctagttacagaatgc 16758947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 52940464 - 52940506
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattagg 76  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||    
T  52940464 ttagatgattttgagtgcctgaacatgtataataataattagg 52940506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Original strand, 21787685 - 21787746
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    ||||||||| || ||||| |||||||||||||||||||||| |  |||| |||||| |||||    
T  21787685 ttttgacttgtgagttgaaccttagatgtttttgagtgcctaaagatgtttaataaagatta 21787746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 50613881 - 50613914
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcc 170  Q
    |||||||||||||||||||||||||| |||||||    
T  50613881 cctgaactcgccatagcgagtagaggttctcgcc 50613914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 50621709 - 50621742
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcc 170  Q
    |||||||||||||||||||||||||| |||||||    
T  50621709 cctgaactcgccatagcgagtagaggttctcgcc 50621742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 21533481 - 21533537
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaat 90  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || ||||||    
T  21533481 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagaat 21533537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 38801157 - 38801225
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  |||||||||||||||||||| || ||| ||| ||  ||||| || ||||||||    
T  38801157 acctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttag 38801225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 41049809 - 41049841
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgc 169  Q
    ||||||||||||||||||||||||||| |||||    
T  41049809 cctgaactcgccatagcgagtagaggccctcgc 41049841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 9e-85; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 21329127 - 21329373
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||||| ||||| || | |||||||| ||||||| |||| ||||||||||||     
T  21329127 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaacct 21329226  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    |||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || | ||||| ||||||||||||||||| |    
T  21329227 ggaataatttaggaatgaatttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattacctagttacagaatgccttgtt 21329326  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  21329327 taggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 21329373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 21566035 - 21565787
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  21566035 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 21565936  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| |||||||||||| | || ||| ||||||||||||||| ||||| |||||||||||||| |  || || | |||||||||||| ||||    
T  21565935 ctggaaagattttagaatgaattttcgtgaattgtacctgaactcgccatggcgagcagaggctctcgcctcgtgagctaactagttacagaatgacttg 21565836  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||| || |||||||||||||||| ||||||||||||||||||||||||    
T  21565835 tttatgtaaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 21565787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 22959166 - 22959411
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| |    
T  22959166 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 22959265  T
Q  104 ga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    || | | ||| |||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||| || || || | ||||||||||||||||| |    
T  22959266 gagagacttt-agaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgccttgtt 22959364  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||  ||||  ||| ||||||||||||||||||||    
T  22959365 taggttaaatgcgattcttgttgcacaagttgatgtgagttgatctt 22959411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 33 - 228
Target Start/End: Original strand, 5888837 - 5889033
Alignment:
Q  33 cttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagt 132  Q
    ||||||||||||||||||||||| | ||||| || ||||||||||||||||||||| |||||||||||  |||||||||||||||||||| |||| ||||    
T  5888837 cttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacatggaatagtttaagaatgaatctttgtgagt 5888936  T
Q  133 tgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacg 228  Q
    |||||||||||||||||| |||||||||||||||||||| || || |||||| ||||||||||||||| ||||||||||||||||||||||| ||||    
T  5888937 tgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtttaggttaaatgcgatctttgtcgcacg 5889033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 21741175 - 21741421
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||| ||| ||||||| |||  || || |||||||| ||||||||||||||| | ||||| || |||| ||||||||||| |||| ||||||||||||     
T  21741175 gattttgtagttttgacctttaagtcgaaccttagatatttttgagtgcctgaacttgtatgatgatgaataggaaagattatagattgagattgaacct 21741274  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| |||||| || |||||||||||||||||||||| |||||||||||||||||||| |  || || ||||||||| |||| |||| |    
T  21741275 ggaatagtttaagaacgaatttatgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgtgagctaaccagttacataatgtcttgtt 21741374  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||    
T  21741375 taggttaaaagcgatctttgtcgcacgagttgatgtgagttgatctt 21741421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 34 - 248
Target Start/End: Original strand, 26011697 - 26011911
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| || |||||| || | ||||| |||||||||||| |||||||| || | |||||||||||| ||||||||||||||||| |||||||||||||    
T  26011697 ttagatgattatgagtgtctaaacatgtgtaataatgattaagaaagattctaaattgagattgaacctggaatagtttaagaatggatttttgggagtt 26011796  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttg 233  Q
     |||||||||||||||| ||||||||||||  |||||| || ||||  | ||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  26011797 acacctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctagttacagaatgctttgttaggttaaatgtgatctttgtcacacgagttg 26011896  T
Q  234 atgtgagttgatctt 248  Q
    |||||||||||||||    
T  26011897 atgtgagttgatctt 26011911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 244
Target Start/End: Complemental strand, 22144508 - 22144299
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| |||||||||||||| ||||| ||| ||||||||||||||||| |||| |||||||||||| |||||| |||||||||| |||||||||||||    
T  22144508 ttagatgattttgagtgcctgaacatgtgtaacaatgattaggaaagattctagattgagattgaacctggaataatttaagaatggatttttgggagtt 22144409  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttg 233  Q
     ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |  ||||| |   ||||||||||||| |||||||||    
T  22144408 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggat-tttgcgatctttgtcgcacgagttg 22144310  T
Q  234 atgtgagttga 244  Q
     || |||||||    
T  22144309 ttgagagttga 22144299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19669391 - 19669142
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||  ||||||||||||||    
T  19669391 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgtctgaacatgtctaataatgattaggaaagattggggaatgagattgaac 19669292  T
Q  101 cgggaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
      ||||    || |||||||| |||||| || ||| ||||||||||||||| ||| ||||||||||||||||  | || || | ||||||||||||||||    
T  19669291 gtggaaagactttagaatgaattttttgtgaattgtacctgaactcgccatggcgtgtagaggctctcgcctcaccagctaactagttacagaatgcctt 19669192  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||||| |||||| |||  ||||| ||| ||||||||||||||||||||    
T  19669191 gtttaggataaatgtgattcttgtcgcacaagttgatgtgagttgatctt 19669142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 1096957 - 1096755
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||| |    
T  1096957 agatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaatc 1096858  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  |||||||| |||||| | |   ||||||||||||||  |||||||||||||||||||| || ||| ||||||  |||||||||||| |    
T  1096857 tggaaagattgcagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttt 1096758  T
Q  202 tag 204  Q
    |||    
T  1096757 tag 1096755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 11580878 - 11581070
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  11580878 atttcgtgattttgacttttgagttgatccttagaagcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 11580977  T
Q  104 gaatag-tttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    | |||| ||| ||||| ||  |||| || |   ||||||||||||||| ||||| |||||||||||||| || ||| ||||| |||||||||||    
T  11580978 g-atagattttagaataaaactttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgc 11581070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 21871202 - 21871444
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| || |||||||||||||||| ||||| |||||||||||||    
T  21871202 agatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacc 21871301  T
Q  102 gggaatagttta-agaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || |||  ||||| | ||||| || |   ||||| ||||||||| |||||||||||||| || || || || || |||  ||||||||||||||    
T  21871302 tggaa-agattatggaatggacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttg 21871400  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     ||||||||| |||||| ||||| || |||||| | ||||||||    
T  21871401 ctaggttaaacgcgatccttgtcgcatgagttgttatgagttga 21871444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 21875482 - 21875724
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| || |||||||||||||||| ||||| |||||||||||||    
T  21875482 agatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagagtgtaggatgagattgaacc 21875581  T
Q  102 gggaatagttta-agaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || |||  ||||| | ||||| || |   ||||| ||||||||| |||||||||||||| || || || || || |||  ||||||||||||||    
T  21875582 tggaa-agattatggaatggacttttgtgattctgacctgtactcgccatggcgagtagaggctcccggctcgcgagctaaccaaatacagaatgccttg 21875680  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     ||||||||| |||||| ||||| || |||||| | ||||||||    
T  21875681 ctaggttaaacgcgatccttgtcgcatgagttgttatgagttga 21875724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 21985778 - 21986019
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  21985778 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 21985877  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||||| | |   ||||||||||||||  || || |||||| ||||||| || ||| ||||||  ||||| || ||||    
T  21985878 tggaa-agatttagaatgaaacttttggaattctgacctgaactcgccacggcaagcagaggccctcgcctcgcgagtgacccagaaacagagtgtcttg 21985976  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||   ||||| ||||||  ||||||||| || |||||||    
T  21985977 ttaggtt-tttgcgacctttgttgcacgagttgttgagagttga 21986019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 135 - 248
Target Start/End: Original strand, 21501918 - 21502030
Alignment:
Q  135 cacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttga 234  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  21501918 cacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagtt-cagaatgccttgttgggttaaatgcgatatttgtcgcacgagttga 21502016  T
Q  235 tgtgagttgatctt 248  Q
    ||| ||||||||||    
T  21502017 tgttagttgatctt 21502030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 23390127 - 23390297
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  23390127 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 23390226  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||| ||||||||||||| ||||||    
T  23390227 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcct 23390297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 139
Target Start/End: Original strand, 21498649 - 21498785
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||| |||||||||||| |||  ||||| |||| ||||||||||||||||||| ||||||||||||| ||||||| |||||||||| ||||||||||||     
T  21498649 gattgcgtaattttgacctttaagttgaaccttggatgtttttgagtgcctgaacatgtataataattattaggagagattgtagattgagattgaacct 21498748  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacct 139  Q
    ||||||||| |||||| |||||||| ||||| |||||    
T  21498749 ggaatagttgaagaataaatttttgagagttacacct 21498785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 24529711 - 24529505
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  24529711 agatttcgtgattttgacttttgagttgatccttagatgcttttcagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 24529612  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||  |||  |||||| || |||||| | |   | ||||||||||||  ||||| |||||||||||||| || ||| ||||||  |||||  | ||||    
T  24529611 tggaaaggttgtagaatgaaacttttggaattctgatctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagagtcttg 24529512  T
Q  201 ttaggtt 207  Q
    |||||||    
T  24529511 ttaggtt 24529505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 36154469 - 36154653
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatag-t 110  Q
    ||||||||||||  ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| |||||| |||||||||||| || |||| |    
T  36154469 attttgacttttaagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagagtgagattgaacctgg-atagat 36154567  T
Q  111 ttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    || ||||| ||  |||| || |   ||||||||||||||| |||||||||||||||||||| || ||| ||| | |||||||||||    
T  36154568 tttagaataaaactttgagaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgc 36154653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 9078442 - 9078239
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||| ||| ||| |||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||    
T  9078442 agatttcgtgattttgacttttgagttgatctttatatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtagaatgagattgaacc 9078343  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| ||  ||| | | |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  9078342 tggaa-agatttagaatgaaaccttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 9078244  T
Q  201 ttagg 205  Q
    |||||    
T  9078243 ttagg 9078239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 13095984 - 13095779
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||  |||||| ||||| ||||||||||||||||||| ||||| ||||||||| |||    
T  13095984 agatttcgtgattttgacttttgagttgatccttagatgcttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacc 13095885  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || || ||||| |   |||||||||||||| |||||| |||||| ||||||| || ||| ||| ||  ||||| || ||||    
T  13095884 tggaa-agatttagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggccctcgcctcgcgagtgacctagaaacagagtgacttg 13095786  T
Q  201 ttaggtt 207  Q
    |||||||    
T  13095785 ttaggtt 13095779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 19660468 - 19660714
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| ||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||| ||||    
T  19660468 agattttgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtggaatgagattaaacc 19660567  T
Q  102 gggaatagtttaagaatgaatttttgggag-ttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||   || ||||  |  | | ||||||||||| ||||| |||||||||||||| || ||       ||||||||| |||||     
T  19660568 tggaa-agacttagaatgaaaactttggagaatctaaccgaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaacgccttt 19660666  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| ||||| |||||||||   ||||||||||||||||||||||    
T  19660667 ttaggttgaatgcaatctttgtcgttcgagttgatgtgagttgatctt 19660714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 25431884 - 25431643
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| || |||||||||||||||| | ||| ||||||||| |||    
T  25431884 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaagaatttaggatgagattggacc 25431785  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||||| | |   || |||||||||||  |||||||||||||||| ||| || ||| ||||||  |  || |||||||    
T  25431784 tggaa-agatttagaatgaaacttttggaaatctgacttgaactcgccacggcgagtagaggctctcacctcgcgagtgacccagaaatcgagtgccttg 25431686  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||| |   ||||| |||||| |||||||||| || |||||||    
T  25431685 ttaggat-tttgcgacctttgttacacgagttgttgagagttga 25431643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 12 - 244
Target Start/End: Original strand, 22119834 - 22120066
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtt 111  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||||| |||| ||      
T  22119834 attttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacctggaa-agac 22119932  T
Q  112 taagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaa 209  Q
    | ||||||||  ||||| || |   | ||||||||||||| ||||| |||||||||||||| || ||        ||||||||||||||| |||||||||    
T  22119933 ttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgccttgtttaggttaa 22120031  T
Q  210 atgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||||| ||||||||| | ||||||||    
T  22120032 atgcgatctttgtcgcacgagttgttatgagttga 22120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 21292612 - 21292717
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||| |||||||||||||    
T  21292612 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattgaacc 21292711  T
Q  102 gggaat 107  Q
     |||||    
T  21292712 tggaat 21292717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 24494058 - 24493817
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||| ||| ||||||  |||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  24494058 agatttcgtgattttgacttttgagttgatccttaaatgcttttgaacgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 24493959  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||| ||| |   ||||||||||||||  ||||| ||||||| |||||| |  ||| |||||   ||||| || ||||    
T  24493958 tggaa-agatttagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctttcgcctcgtgagtaacccataaacagagtgtcttg 24493860  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||   ||||| ||||||  ||||||||| || |||||||    
T  24493859 ttaggtt-tttgcgacctttgttgcacgagttgttgagagttga 24493817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 25422022 - 25421819
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||   ||| ||||||||| |||    
T  25422022 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctattaatgattaggaaagaacttaggatgagattggacc 25421923  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || ||| || | |   || |||||||||||  |||||||||||||||||||| || ||| ||| ||  || || |||||||    
T  25421922 tggaa-agatttagaatgaaactttcggaaatctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttg 25421824  T
Q  201 ttagg 205  Q
    |||||    
T  25421823 ttagg 25421819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 13025800 - 13025595
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||| ||||| ||||||||||||||  ||||||  |||||| ||||| ||||||||||||||||||| ||||| ||||||||| |||    
T  13025800 agatttcgtgattttgaattttgagttgatccttagatacttttgaaagcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacc 13025701  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || || ||||| |   |||||||||||||| |||||| | |||| ||||||| || ||| ||| ||  ||||| || ||||    
T  13025700 tggaa-agatttagaatgaaacttgtgggattctgacctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacctagaaacagagtgacttg 13025602  T
Q  201 ttaggtt 207  Q
    |||||||    
T  13025601 ttaggtt 13025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 22075498 - 22075393
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||||| |||| ||||| |||| | ||||||    
T  22075498 agatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggtaagaatgtaggatgaaaatgaacc 22075399  T
Q  102 gggaat 107  Q
     |||||    
T  22075398 tggaat 22075393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 8286484 - 8286589
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||  |||||||||||| ||||| |||||||||  |||||||||| || ||||| |||||||||||| |||||| ||||| |||||||||||||    
T  8286484 agatttcgtgtttttgacttttgagttgaaccttagatgcatttgagtgccggaacatgtctaataatgattaagaaagaatgtaggatgagattgaacc 8286583  T
Q  102 gggaat 107  Q
     |||||    
T  8286584 tggaat 8286589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 101
Target Start/End: Original strand, 22107017 - 22107114
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||| |||||||||||| ||||| | |||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| | |||||||||||    
T  22107017 atttcgtatttttgacttttgagttgaactttagatgcgtttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggacgagattgaacc 22107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 24766968 - 24767210
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | |||| |||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| |||||| |||||| ||||| ||||||||||| |    
T  24766968 agatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatc 24767067  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   | ||||||||| ||| ||||| |||||||||||||| || ||        |||||||||||||||    
T  24767068 tggaa-agacttagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgccttg 24767165  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     |||||||||||| |||||||||| ||||||||| | ||||||||    
T  24767166 tttaggttaaatgtgatctttgtcgcacgagttgttatgagttga 24767210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 20026521 - 20026619
Alignment:
Q  29 gatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttg 127  Q
    |||| ||||||| |||||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||  || | ||||||| |||| |||||||    
T  20026521 gatctttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttg 20026619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 20026706 - 20026816
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||||||| ||||||||||||||||||||| || |||      |  ||||||||||||||||| ||||||| || | ||||| ||||||| |||||    
T  20026706 ctgaactcgccacagcgagtagaggctctcgcctcgcgagtccttgtgagacagaatgccttgttagcttaaatgtgaccgttgtcgcacgagtcgatgt 20026805  T
Q  238 gagttgatctt 248  Q
    |||||||||||    
T  20026806 gagttgatctt 20026816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 22177798 - 22177901
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| || |||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||| ||||||| |  | ||||||| |||| |||||    
T  22177798 gttgaaccctagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagtttgaacctgagaaagtttaaaaatggatttt 22177897  T
Q  126 tggg 129  Q
    ||||    
T  22177898 tggg 22177901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 25744074 - 25743967
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    |||||||||||| |||||||||||||||||||| || ||      ||| ||||| |||||||||||| |  ||| || ||||||| ||||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgagcccttgagtgacagactgccttgttagggtttatgtgacctttgtcgcacgagttgatgtg 25743975  T
Q  239 agttgatc 246  Q
    ||||||||    
T  25743974 agttgatc 25743967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 37724384 - 37724338
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  37724384 gtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 37724338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 23201845 - 23201803
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  23201845 ttttgacttttgagttgaaccttagatgtttttgagtgcctga 23201803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 26732421 - 26732487
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| ||||||||| |||||||||| ||| || |||| ||| |||||||    
T  26732421 ttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 26732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 26740234 - 26740300
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| ||||||||| |||||||||| ||| || |||| ||| |||||||    
T  26740234 ttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 26740300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 17918796 - 17918845
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  17918796 attttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17918845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 22177984 - 22178017
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcc 170  Q
    ||||||||||||||||||||||||||||||||||    
T  22177984 cctgaactcgccatagcgagtagaggctctcgcc 22178017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 21366305 - 21366349
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  21366305 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 21366349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 21887300 - 21887260
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  21887300 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21887260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26704552 - 26704500
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    ||||||| |||||||||||||| ||||| || ||||| |||||||||||||||    
T  26704552 gatttcgaaattttgacttttgagttgaaccctagatatttttgagtgcctga 26704500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26974285 - 26974233
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    ||||||| |||||||||||||| ||||| || ||||| |||||||||||||||    
T  26974285 gatttcgaaattttgacttttgagttgaaccctagatatttttgagtgcctga 26974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 20910443 - 20910490
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    ||||||||| ||||||||||||| ||||| |||||||||| |||||||    
T  20910443 agatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 20910490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 15796955 - 15796889
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||| ||  |||||||| |||||||||| ||| || |||| |||||||||||    
T  15796955 ttagatggttttgagtgccagaatatgtataagaatgattaggcaagtttttagactgagattgaac 15796889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 25574056 - 25574122
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| ||||||||| |||||||||  ||| || |||| ||| |||||||    
T  25574056 ttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaac 25574122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 25575249 - 25575315
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| ||||||||| |||||||||  ||| || |||| ||| |||||||    
T  25575249 ttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaac 25575315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 25576442 - 25576508
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| ||||||||| |||||||||  ||| || |||| ||| |||||||    
T  25576442 ttagatggttttgagtgcctgaacatgtataagaatgattagacaagtttttagattgaaattgaac 25576508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 25744256 - 25744190
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||  || |||| |||||||||||    
T  25744256 ttagatggttttgagtgcctgaatatgtataagaatgattaggtaaatttttagactgagattgaac 25744190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 1858621 - 1858666
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  1858621 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 1858666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 246
Target Start/End: Original strand, 22178064 - 22178093
Alignment:
Q  217 ctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||||||||||||||||    
T  22178064 ctttgtcacacgagttgatgtgagttgatc 22178093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 23500993 - 23501030
Alignment:
Q  18 acttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  23500993 acttttgagttgaaccttagatgtttttgagtgcctga 23501030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 14079624 - 14079584
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  14079624 ttttgacttttgagttcaaccttagatgtttttgagtgcct 14079584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 20806027 - 20805983
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  20806027 gtaattttgacttttgagttgaaccttatatgcttttgagtgcct 20805983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 22032792 - 22032752
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  22032792 ttttgacttttgagttgaaccttagatgcttttgagtgcct 22032752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 23512579 - 23512543
Alignment:
Q  17 gacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  23512579 gacttttgagttgaaccttagatgtttttgagtgcct 23512543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 29916616 - 29916580
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatg 40  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  29916616 atttcgtgattttgacttttgagttgatccttagatg 29916580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 31342579 - 31342539
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  31342579 ttttgacttttgagttgaaccttagatgcttttgagtgcct 31342539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 33 - 248
Target Start/End: Complemental strand, 10987 - 10772
Alignment:
Q  33 cttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagt 132  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||| |||||||||||| ||||||||||||||||||||||||| ||||    
T  10987 cttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctggaatagtttaagaatgaatttttgtgagt 10888  T
Q  133 tgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagtt 232  Q
    | ||||||||||||||||||||||||||||||||||||| || ||||||| |||| || ||||||||||||||||||||||||||| |||| ||||||||    
T  10887 tacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttacctagttccaaaatgccttgttaggttaaatgcgatctctgtcgcacgagtt 10788  T
Q  233 gatgtgagttgatctt 248  Q
    ||||||||||||||||    
T  10787 gatgtgagttgatctt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 153; Significance: 3e-81; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 7302 - 7054
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  7302 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 7203  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| |||||||||||||| ||  || ||||||||||||||| ||||||||||||||||||||||| || || | |||||||||||||||||    
T  7202 ctggaaagattttagaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgccttgcgagctaactagttacagaatgccttg 7103  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  7102 tttaggttaaatgcgattcttgtcgcacaagttgatgtgagttgatctt 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 8505 - 8260
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||| |||||||  ||  ||||| ||||| ||||||||| ||| ||||  |||| ||||||||||||| ||||||| |||| ||||||||||||     
T  8505 gatttcgtagttttgacccttaagttgaaccttaaatgtttttgggtgtctgaatatgtgtaataatgattagaaaagattctagattgagattgaacct 8406  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||| |||||| ||||| ||||||| || ||||  ||||||||| ||||| |||||    
T  8405 ggaatagtttaagaatggatttttgggagttacacctgaactcgccatggcgagtggaggccctcgcctcgcgagttgtccagttacataatgctttgtt 8306  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||  |||| |||||||||| ||||||||||||||||||||||||    
T  8305 aggtataatgtgatctttgtctcacgagttgatgtgagttgatctt 8260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 22073376 - 22073160
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggag 131  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||| |||||||||||    
T  22073376 ccttagaggtttttgagtgcctgaacatgtgtaataatgattagaaaagattctagaatgagattgaacctagaatagtttaagaatggatttttgggag 22073277  T
Q  132 ttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagt 231  Q
    || |||||||||||||||| |||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||    
T  22073276 ttacacctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaatgctttgttaggttaaatgcgatccttgtcgcacgagt 22073177  T
Q  232 tgatgtgagttgatctt 248  Q
    |||||||||||||||||    
T  22073176 tgatgtgagttgatctt 22073160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 42 - 248
Target Start/End: Complemental strand, 16056778 - 16056572
Alignment:
Q  42 ttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagttgcacctga 141  Q
    ||||| || ||||| ||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||| || |||||||    
T  16056778 ttttgtgtacctgaacatgtataataatgaataggaaagattttagattgagattgaacctggaatagtttaagaatggatttttgggaattacacctga 16056679  T
Q  142 actcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagt 241  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  16056678 actcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttaggttaaatgcgatctttgtagcacgagttgatgtgagt 16056579  T
Q  242 tgatctt 248  Q
    |||||||    
T  16056578 tgatctt 16056572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 44014665 - 44014419
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  44014665 cagatttcgtaattttgacttttgagttgatacttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 44014566  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| ||||||||||||||  ||||||||||||||||||||| | |||||||||||||||||| || || || || ||||||||||||||||    
T  44014565 ctggaaagattttagaatgaatttttgttagttgcacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaaccggttacagaatgccttg 44014466  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
     ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  44014465 tttaggttaaatgcgatcattgtcgcacgaattgatgtgagttgatc 44014419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 16219348 - 16219593
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||| |||||||||| |||  ||||| ||||||||||||||||||| || | | ||||||||||||||||||||||||| |||| ||||||||||||     
T  16219348 gatttcataattttgacctttaagttgaaccttagatgtttttgagtgtctaaacttgtataataatgattaggaaagattttagattgagattgaacct 16219447  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||||| ||||||| || ||||  | |||||||||||||||||||    
T  16219448 ggaatagtttaagaatgaatttttgggagttacacgtgaactcgccatggcgagtagaggccctcgcctcgcgagttgtctagttacagaatgccttgtt 16219547  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  16219548 aggttaaatgcgatctttgtcgcacaagttgatgttagttgatctt 16219593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 68237 - 67989
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||  |||| |||||||||||||||||||||| ||| |||||||||||    
T  68237 cagatttcgtaattttgacttttgagttgatccttaaatgttttcgagtgcctgaatatgtctaataatgattaggaaagattggagattgagattgaac 68138  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | |||||| ||||||||  || || |||||||| ||  |||||||||||| |||||||||||||||||||| || || || |||||||||||||||||||    
T  68137 ctggaataatttaagaacaaacttgtgggagttacagatgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttg 68038  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  68037 tttaggttaaatgcgatccttgtcgcacaagttgatgtgagttgatctt 67989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 9389325 - 9389573
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||| |||||||||||  ||||| |||| |||||||||||||| |||  | |||||||| ||||||||||||||||||||| |||||||||||    
T  9389325 cagattttgtacttttgacttttaagttgaaccttggatgtttttgagtgtctggacttgtataatgatgattaggaaagattgtagattgagattgaac 9389424  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||||||||||||| |||||| || ||||| || ||||||||||||| |||||||||||||||||||| || || ||  ||||||||||||||||||    
T  9389425 ctggaatagtttaagaacgaatttatgtgagttacagctgaactcgccatggcgagtagaggctctcgcctcgcgagctaagcagttacagaatgccttg 9389524  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     |||||||||| |||||||||||||||||||||||||||||||||||||    
T  9389525 tttaggttaaaagcgatctttgtcacacgagttgatgtgagttgatctt 9389573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 12255454 - 12255663
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  12255454 ttagatgattttgagtgcttgaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatgaatttttgggagtt 12255553  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttg 233  Q
     ||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| |  ||||| |   |||||||||||||||||||||||    
T  12255554 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggat-tttgcgatctttgtcacacgagttg 12255652  T
Q  234 atgtgagttga 244  Q
     || |||||||    
T  12255653 ttgagagttga 12255663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 47832297 - 47832052
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | |||||||| |     
T  47832297 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagattgaatct 47832198  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| ||| ||||| ||||| ||| |||||||||||| |||||||||||| ||||||| || |  | |||||||||||||||| ||| |    
T  47832197 ggaatagtttaagaacgaa-ttttgagagttacacatgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtt 47832099  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||||    
T  47832098 taggttaaatgtgatctttgtcggacgagttgatgtgagttgatctt 47832052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 16324495 - 16324250
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| ||||  |||||||||||||| ||| ||||| |||||||||||||||||||||| ||  ||||||||||||     
T  16324495 gatttcgtaattttgacctttaagttgaaccttgaatgtttttgagtgcttgaacatgtctaataatgattaggaaagattggagtttgagattgaacct 16324396  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||||||||| ||||||||| |||||  |   ||||||||||| |||||||||||| |||||||||| |  | ||||||||||||||||||||||    
T  16324395 ggaatagtttaagaacgaatttttgagagttagattggaactcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttgtt 16324296  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||| |||| ||||| || |||||||||||||||||||||    
T  16324295 aggttaaatgtgatccttgtcgcatgagttgatgtgagttgatctt 16324250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 810759 - 811003
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||| |||||||||    
T  810759 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatatctaataatgattaggaaagattggagaataagattgaac 810858  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttaccca-gttacagaatgcctt 199  Q
    | ||||    || |||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||| || || |||  | |||||| ||||||||    
T  810859 ctggaaagaatttagaatgaatttttgtgaactgtacctgaactcgccatggcgagtagaggctctcgcctcgcgag-tacttatgttacaaaatgcctt 810957  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    | ||| ||||||||||||||||||| | | ||||||||||||||||    
T  810958 gtttaagttaaatgcgatctttgtcgcgcaagttgatgtgagttga 811003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 34 - 244
Target Start/End: Original strand, 2279781 - 2279990
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| |||||||||||||| |||| |||||||||||||||||||||| |||| |||||||||||| | ||||||||||||||| ||||||||| |||    
T  2279781 ttagatgattttgagtgcctgaacatgcataataatgattaggaaagattttagattgagattgaacctgtaatagtttaagaatggatttttgggtgtt 2279880  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttg 233  Q
     ||||||||||||||||||||||||||||| ||||||| || |||| || ||||| ||||||| |  ||||| |   |||||||||||||||||||||||    
T  2279881 acacctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggat-tttgcgatctttgtcacacgagttg 2279979  T
Q  234 atgtgagttga 244  Q
     || |||||||    
T  2279980 ttgagagttga 2279990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 18006132 - 18005891
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||      |||||||||||    
T  18006132 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattatgaaagatt------tgagattgaac 18006039  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    |   ||||||||||||| ||| || ||||||||  ||||||||||||||| |||| ||||||| ||||||| || | ||  | ||||||| |||||||||    
T  18006038 ctaaaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgactagaggccctcgcctcgcgaattgactagttacaaaatgccttg 18005939  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||| | ||||||||||||||| ||| ||||||| ||||||||||||    
T  18005938 tttaggat-aatgcgatctttgtcgcacaagttgatatgagttgatctt 18005891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 4 - 190
Target Start/End: Original strand, 12756350 - 12756535
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  12756350 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12756449  T
Q  104 gaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttaca 190  Q
    || || |||||||||||| ||||||| || || |||||||||| |||| |||||||||||||||||||| || |||| |||| |||||    
T  12756450 gatta-tttaagaatgaactttttggaagctg-acctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattaca 12756535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 38227970 - 38227765
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  38227970 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 38227871  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||| ||| |   ||||||||||||||  ||||| |||||||||||||| || ||| |||||   ||||| |||||||    
T  38227870 tggaa-agatttagaatgaaactttttggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccataaacagagtgccttg 38227772  T
Q  201 ttaggtt 207  Q
    |||||||    
T  38227771 ttaggtt 38227765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 28504932 - 28505177
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  28504932 agattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 28505031  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | |||||| || ||| | || |   ||| ||||||||||| ||||| |||||||||||||| || ||       |||||||||||||||     
T  28505032 -tgaaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaatgccttt 28505129  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| |||||||||||||||   ||||||||||||||||||||||    
T  28505130 ttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatctt 28505177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 196
Target Start/End: Original strand, 17061593 - 17061785
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  17061593 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17061692  T
Q  104 gaatag-tttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    | |||| ||| ||||| ||  |||| || |   |||||||||||| || |||||||||||||||||||| || ||| ||| | |||||||||||    
T  17061693 g-atagattttagaataaaactttgagaatctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgc 17061785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 193
Target Start/End: Complemental strand, 44116992 - 44116804
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||| ||| ||||||||||| |||  ||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  44116992 atttcgtaattttgactcttgagttgatccttatatgcctttgagtccctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacccg 44116893  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaa 193  Q
    ||| || || ||||||||  ||||||| |   ||||||||||||||| ||||| |||||||||||||| || ||| || |||||||||||    
T  44116892 gaa-agatttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgactcagttacagaa 44116804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 3563995 - 3564198
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||| |||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  3563995 agatttcgttattttgacttttgagttgattcttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 3564094  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  |||||||| |||||| | |   |||||||||||||| |||||| | | |||||||||| || ||| ||||||  ||||| ||||||||    
T  3564095 tggaaagattgtagaatgaacttttggaaatctgacctgaactcgccacagcgagcaaatgctctcgcctcgcgagtgacccagaaacagagtgccttgt 3564194  T
Q  202 tagg 205  Q
    ||||    
T  3564195 tagg 3564198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 9509679 - 9509476
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  9509679 agatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 9509580  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  9509579 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 9509480  T
Q  201 ttag 204  Q
    ||||    
T  9509479 ttag 9509476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 15143667 - 15143871
Alignment:
Q  2 agatttcgtaattttgactttt-gtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||| |||||||||||| | ||||  |||||||||  ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  15143667 agatttcgtgattttgactttttgagttgtaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagattttagaatgagattgaac 15143766  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| |||||||| ||||| || |   ||||| ||||||||| ||||| |||||||||||||| || ||| ||| ||  ||||| |||||||    
T  15143767 ctggaaagattttagaatgaacttttgtgattctgacctgtactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttg 15143866  T
Q  201 ttagg 205  Q
    |||||    
T  15143867 ttagg 15143871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 21064823 - 21064962
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggag 131  Q
    |||||||||||| |||| |||||| |||||| |||||||||||||||| ||| ||||||||||||||||  |||||||| | |||||| ||||||| | |    
T  21064823 ccttagatgtttatgagggcctgaacatgtacaataatgattaggaaatattttagaatgagattgaacttggaatagtgtcagaatggatttttgagtg 21064922  T
Q  132 ttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||  |||| |||||||||| ||||||||||||||||||||    
T  21064923 ttttaccttaactcgccatggcgagtagaggctctcgcct 21064962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 16385889 - 16385994
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  16385889 agattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 16385988  T
Q  102 gggaat 107  Q
     |||||    
T  16385989 tggaat 16385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 9751181 - 9751423
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||| |||||||    
T  9751181 agatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgaggttgaacc 9751280  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || ||  | ||||||||||||| | ||| |||||||||||||| || ||       ||||||||||||||||    
T  9751281 tggaa-agacttagaatgaaactttggagaatttga-ctgaactcgccatggtgagcagaggctctcgcctcgcgagcgcttgtgttacagaatgccttg 9751378  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     |||| |||||||||||||||||| ||||||||| | ||||||||    
T  9751379 tttagtttaaatgcgatctttgtcgcacgagttgttatgagttga 9751423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 12699322 - 12699218
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||| ||||||||    
T  12699322 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacc 12699223  T
Q  102 gggaa 106  Q
     ||||    
T  12699222 tggaa 12699218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 40443867 - 40443762
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||    
T  40443867 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacc 40443768  T
Q  102 gggaat 107  Q
     |||||    
T  40443767 tggaat 40443762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 15754518 - 15754763
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||| | |||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||    
T  15754518 agatttcgaatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacc 15754617  T
Q  102 gggaatagtttaagaatgaat--ttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     |||| |  ||| |||||||   ||||| || |   ||| ||||| ||||  ||||| | |||||||||||| |  ||        ||||| ||||||||    
T  15754618 tggaaaaactta-gaatgaaaacttttgagaatctgacc-gaacttgccacggcgagcataggctctcgcctcgggagcacttgttttacataatgcctt 15754715  T
Q  200 gtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  15754716 gtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatc 15754763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 34201273 - 34201028
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| ||||||||| |||| ||||| |||||||||| | |||||| | |||||||||||||||||    
T  34201273 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgatcaagaaagaatttagaatgagattgaacc 34201174  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     | || ||  | ||||||||  ||||| || |   | ||||||||||||| ||||| ||||||||| |||| || ||       |||||| ||||||||     
T  34201173 tgtaa-agacttagaatgaaaatttggagaatctga-ctgaactcgccatggcgagcagaggctcttgcctcgcgagcgtttgtgttacataatgccttt 34201076  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  34201075 ttaggttaaatgcgatccctgtcattcgagttgatgtgagttgatctt 34201028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 27847475 - 27847580
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||| |||||||||||||| | ||| |||||||||||||    
T  27847475 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatttaggatgagattgaacc 27847574  T
Q  102 gggaat 107  Q
     |||||    
T  27847575 tggaat 27847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 2831937 - 2832036
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  2831937 agatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 2832036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 11995689 - 11995768
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaaga 81  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  11995689 agatttcgtatttttgacttttgagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaaga 11995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 18302668 - 18302564
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| |||||||||   |||||||||||| ||||| ||||| | ||||||||||| ||||| |||||||||||||    
T  18302668 agatttcgtaattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtctaatatttattaggaaagaatgtaggatgagattgaacc 18302569  T
Q  102 gggaa 106  Q
     ||||    
T  18302568 tggaa 18302564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 39267277 - 39267519
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||| ||||| |||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  39267277 agattttgtgattttgacttttgagttgaaccttatatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 39267376  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   | ||||||||||||| ||||| |||||||||||||| |  ||        |||||||||||||||    
T  39267377 tggaa-agacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgggagcactagtattacagaatgccttg 39267474  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     |||||||||||| |||||||||| ||||||||| | ||||||||    
T  39267475 tttaggttaaatgtgatctttgtcgcacgagttgttatgagttga 39267519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 15116835 - 15116725
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||| ||||||||||||||||||||||||| || |||      |  ||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  15116835 ctgaactcaccatagcgagtagaggctctcgcctcgcgagtccttgtgagacagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgt 15116736  T
Q  238 gagttgatctt 248  Q
    |||||||||||    
T  15116735 gagttgatctt 15116725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 12901682 - 12901573
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    |||||||||||||||||||||||||||||||||  | ||||  ||| ||||| ||  ||||||||||||||||| ||  ||||||  |||||||||||||    
T  12901682 tgaactcgccatagcgagtagaggctctcgcctcacgagttgtccatttacaaaacaccttgttaggttaaatgtgacatttgtcgtacgagttgatgtg 12901583  T
Q  239 agttgatctt 248  Q
    ||||||||||    
T  12901582 agttgatctt 12901573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 26212475 - 26212370
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| | |||||| |||| ||||| |||||||||||||    
T  26212475 agattttgtaattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatatttattaggtaagaatgtaggatgagattgaacc 26212376  T
Q  102 gggaat 107  Q
     |||||    
T  26212375 tggaat 26212370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 15113296 - 15113188
Alignment:
Q  140 gaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtga 239  Q
    |||||||||||||||||||||||||||||||| || |||      |  |||| |||||||||||||||||||| || ||||||| |||||||||||||||    
T  15113296 gaactcgccatagcgagtagaggctctcgcctcgcgagtccttgtgagacaggatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgtga 15113197  T
Q  240 gttgatctt 248  Q
    |||||||||    
T  15113196 gttgatctt 15113188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 14045281 - 14045187
Alignment:
Q  35 tagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  14045281 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 14045187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 14355311 - 14355217
Alignment:
Q  35 tagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  14355311 tagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 14355217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 128
Target Start/End: Original strand, 1867650 - 1867743
Alignment:
Q  35 tagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgg 128  Q
    ||||||||||| |||||||||  ||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| ||||||||    
T  1867650 tagatgttttttagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 1867743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Complemental strand, 12901852 - 12901768
Alignment:
Q  45 tgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  12901852 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 12901768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 18154469 - 18154521
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  18154469 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 18154521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 248
Target Start/End: Original strand, 11995843 - 11995906
Alignment:
Q  185 gttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||| |||||||||||||||||||||||   |||||||||||||||| |||||    
T  11995843 gttacagaatgcctttttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatctt 11995906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 9177252 - 9177318
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||| || |||| |||||||||||    
T  9177252 ttagatgtttttgagtgcctgaacatgtataagaatgattaggtaagtttttagattgagattgaac 9177318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 14036731 - 14036637
Alignment:
Q  35 tagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||||||||||||  ||||| ||||||||||||| ||| || |||| ||||||||||||  | | ||||||| |||| |||||||||    
T  14036731 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttggg 14036637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 129
Target Start/End: Complemental strand, 14346761 - 14346667
Alignment:
Q  35 tagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||||||||||||  ||||| ||||||||||||| ||| || |||| ||||||||||||  | | ||||||| |||| |||||||||    
T  14346761 tagatgtttttgagtgcctgaatatgtaaaataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttggg 14346667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 20219955 - 20220063
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagtta--cagaatgccttgttaggttaaatgcgatctttgtcacacgagttga 234  Q
    |||||||||||||||||||||||||| ||||||||||| ||   ||  || |  |||||| |||||||||| |||||| || ||||||| ||||||||||    
T  20219955 cctgaactcgccatagcgagtagaggttctcgccttgcgag---ccttgtgagacagaataccttgttaggataaatgtgacctttgtcgcacgagttga 20220051  T
Q  235 tgtgagttgatc 246  Q
    |||||| |||||    
T  20220052 tgtgaggtgatc 20220063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 2529632 - 2529733
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||| ||| |  | ||||||| |||| |||||    
T  2529632 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattggacctgacaaagtttaaaaatggatttt 2529731  T
Q  126 tg 127  Q
    ||    
T  2529732 tg 2529733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 19649116 - 19649169
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  19649116 agatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctga 19649169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 24054956 - 24054884
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||  ||||||| ||| |||||    
T  24054956 agattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 24054884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 2760613 - 2760542
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||| |  |||| |||||| ||||||    
T  2760613 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 2760542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 3272273 - 3272202
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    ||||||||||||||||||||| ||||| ||||||||| |||||||||||| |  |||| |||||| ||||||    
T  3272273 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 3272202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 15008263 - 15008328
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||| ||||||||||||||||||||||||| || |||| |||||||  ||||| |||||||    
T  15008263 cctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttgtagaataccttgtt 15008328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 2529866 - 2529926
Alignment:
Q  185 gttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||||||| | ||||||||    
T  2529866 gttacagaatgccttaattaggttaaatgcgatctttgtcgcacgagttgttatgagttga 2529926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 171
Target Start/End: Complemental strand, 35366684 - 35366546
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggag 131  Q
    |||| |||||||||||| |||||| ||||||  | |||||||||| ||  || ||||||||||||||||  |||||||| | |||||| ||| ||| | |    
T  35366684 ccttggatgtttttgagggcctgaacatgtactacaatgattaggcaaagttttagaatgagattgaacttggaatagtgtcagaatggattcttgagtg 35366585  T
Q  132 ttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||  |||  |||||||| | |||||| |||||||||||||    
T  35366584 ttttaccctaactcgccgtggcgagt-gaggctctcgcct 35366546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 10508725 - 10508767
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  10508725 ttttgacttttgagttgaaccttagatgtttttgagtgcctga 10508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 11768526 - 11768592
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| ||||||||| |||||||||| ||| || |||| ||| |||||||    
T  11768526 ttagatgattttgagtgcctgaacatgtataagaatgattaggcaagtttttagattgaaattgaac 11768592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 17017054 - 17017120
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||| ||| || |||| |||||||||||    
T  17017054 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaac 17017120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 11880729 - 11880668
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||||||| ||||| |||||||||||||||||||||| |  |||| || |||||||||    
T  11880729 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 11880668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 9703743 - 9703703
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  9703743 ttttgacttttgagttgaaccttagatgtttttgagtgcct 9703703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 126
Target Start/End: Original strand, 15008107 - 15008199
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaattttt 126  Q
    ||||||| || ||||||||||| |||||||||||||||||||  ||  || |||| |||||||||||| || | ||||| | |||| ||||||    
T  15008107 ttagatgattctgagtgcctgaacatgtataataatgattagacaattttttagattgagattgaacctgggaaagttttaaaatggattttt 15008199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 1867808 - 1867871
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||||||||||||||||||||||   |||||||||| || | ||||||| |||||| |||||||    
T  1867808 tgaactcgccatagcgagtagagtggctcgccttgcgagctgcccagtttcagaataccttgtt 1867871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 16092251 - 16092185
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| | | || |||| |||||||||||    
T  16092251 ttagatgattttgagtgcctgaatatgtataagaatgattaggtaggtttttagattgagattgaac 16092185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 9177431 - 9177464
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||||| |||||||    
T  9177431 ctgaactcgccatagcgagtagaggccctcgcct 9177464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 14194766 - 14194729
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatg 40  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  14194766 gatttcgtaattttgacttttgagttgaaccttagatg 14194729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 26212351 - 26212302
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccag 185  Q
    ||||||||||||||  |||||||||||||||||||| || ||| ||||||    
T  26212351 acctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccag 26212302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 12187490 - 12187450
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  12187490 ttttgacttttgagttgaaccttagatgcttttgagtgcct 12187450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 12321385 - 12321425
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||| ||||||||||||||    
T  12321385 ttttgacttttgagttgaaccttagacgtttttgagtgcct 12321425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 14430359 - 14430315
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||||    
T  14430359 gtaattttgacttttgagttaaaccttagatgcttttgagtgcct 14430315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 17137706 - 17137746
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  17137706 ttttgacttttgagttgaaccttagatgcttttgagtgcct 17137746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 3e-81; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 34 - 246
Target Start/End: Complemental strand, 324693 - 324481
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  324693 ttagatgattttgagtgcctgaatatgtataataatgattaggaaagattgtagaatgagattgaactgagaatagtttaagaatgaatttttgggagtt 324594  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttg 233  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||  ||||||||||||||||| || |||||||  || |||||    
T  324593 gcacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaacaccttgttaggttaaatgtgacctttgtcgtacaagttg 324494  T
Q  234 atgtgagttgatc 246  Q
    |||||||||||||    
T  324493 atgtgagttgatc 324481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 14234979 - 14234734
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||| |||||||||| |||  ||||| |||||||| ||||||||||||||| |||||||||| |||||||||||||||| |||| ||||||||||||     
T  14234979 gatttcataattttgacctttaagttgaaccttagatttttttgagtgcctgaacatgtataatgatgattaggaaagattatagattgagattgaaccc 14234880  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    | ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| || || || ||||||||||||||||||| |    
T  14234879 gaaatagtt-aagaatgaatttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttacagaatgccttgtt 14234781  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||| ||||||||||  || ||||||||| ||||||||||    
T  14234780 taggttaaatgtgatctttgtcgaacaagttgatgttagttgatctt 14234734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 16097821 - 16097573
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||| |||| ||||| ||||||| |||||||||||||| |||||||||||||||    
T  16097821 cagatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgtctgaacatgtctaataattattaggaaagattggagaatgagattgaac 16097722  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | | ||   ||| |||||||||||||| || ||| ||||||||||||||| | |||||||||||||||||| || || || | ||||||| |||| ||||    
T  16097721 ctgaaaagattttagaatgaatttttgtgaattggacctgaactcgccatggtgagtagaggctctcgcctcgcgagctaactagttacaaaatgtcttg 16097622  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  16097621 tttatgttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 16097573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 15471413 - 15471168
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||| ||||| |||||||||| ||||||||||||||||| ||| | ||||||||||     
T  15471413 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtccctgaacatgtataatgatgattaggaaagattggagattaagattgaacct 15471314  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||| ||||||| |  |  | |||||||||||||||| ||| |    
T  15471313 ggaatagtttaagaacgaa-ttttgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaatgctttgtt 15471215  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||| ||||||||||||| || |||||||    
T  15471214 taggttaaatgcgatctttgtcgcacgagttgatgttagatgatctt 15471168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 1465041 - 1465287
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||| ||| ||||||| |||  || || |||||||||||||||||||||||| | ||||| || ||||||| ||||||||||||| ||||||||||||     
T  1465041 gattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattatgaaagattgtagattgagattgaacct 1465140  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    |||||| |||||||| |||||| || |||||||||||||||| ||||| |||||||||||||||||||| || || || ||||||||||||||||||| |    
T  1465141 ggaataatttaagaacgaatttgtgtgagttgcacctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 1465240  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||| |  ||||||||| ||||||||||||||||||||||||    
T  1465241 taggttaaaagtaatctttgtcgcacgagttgatgtgagttgatctt 1465287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 32308159 - 32307912
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||    
T  32308159 cagatttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagattggagaatgagattgaac 32308060  T
Q  101 c-gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    |  |||| | ||| |||||||| ||||||||  || ||||||||||||||| ||||| |||||||||||||| || |||      |||||| ||||||||    
T  32308059 ctaggaagacttt-agaatgaa-ttttgggaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacataatgcctt 32307962  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32307961 gtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 32307912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 12933940 - 12934188
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  |||||||||||||||    
T  12933940 cagatttcgtacttttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaac 12934039  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| |||||||| ||||| ||  || ||||||||||||||| ||||| |||| ||||||||| || |||      |||||||| | |||||    
T  12934040 ctggaaagattttagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagagactctcgcctcgcgagtacttgtgttacagacttccttg 12934139  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12934140 tttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 12934188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 17247917 - 17248111
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  17247917 agatttcgtgattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 17248016  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
     ||||   ||| ||||||||  ||||||| |   ||||||||||||||| ||||| |||||||||||||| || ||| |||||||||||||||||    
T  17248017 tggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgc 17248111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 49667714 - 49667961
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| |||||||||||| ||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||||||  |||||||||||||||    
T  49667714 cagatttcgtacttttgacttttgagttgatccttagatgtttt-gagcgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaac 49667812  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| |||||||| | ||| ||  || ||||||||||||||| ||||| |||||||||||||| || |||      |||||||| |||||||    
T  49667813 ctggaaagattttagaatgaaatattgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagactgccttg 49667912  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  49667913 tttaggttaaatacgatctttgtcgcacgagttgatgtgagttgatctt 49667961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 202
Target Start/End: Original strand, 53070330 - 53070528
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  53070330 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacc 53070429  T
Q  102 gggaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||| ||  ||||||||||| ||||||| || || ||||||||||||||| |||||||||||||||||||| || |||| |||| |||||||| ||||||    
T  53070430 tggatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttg 53070526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 26 - 196
Target Start/End: Original strand, 2050856 - 2051024
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| |||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||| |||||    
T  2050856 gttgaaccttagatgtttttgagtgcctcaacatgtgtaataatgattaggaaagattctagattgagattgaaccg--aatagtttaagaatggatttt 2050953  T
Q  126 tgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||| |  |||| |||||||||| |||||    
T  2050954 tgggagttacacctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgc 2051024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 1644313 - 1644560
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| | |||||||||||||||||||  |||||||||||||||    
T  1644313 cagatttcgtaattttgacttttgagttgatccttggatgtttttgagtgcctgaacatgtctgataatgattaggaaagattagagaatgagattgaac 1644412  T
Q  101 c-gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    | | ||| | ||| |||||||| ||||| ||  || ||||||||||||||| ||||| |||||||||||||| || |||      |||||| | ||||||    
T  1644413 ctgagaagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacaaactgcctt 1644510  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  1644511 gtttaagttaaatgcgatccttgtcgcacgagttgatgtgagttgatctt 1644560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 52523390 - 52523552
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| |||||||||||||| ||||| ||||||| ||||||||||||| |||  ||| |||||||| |||| |||||||||||| |||||||||||||    
T  52523390 ttagatgattttgagtgcctgaacatgtgtaataattattaggaaagattctagtttgatattgaacctggaacagtttaagaatggatttttgggagtt 52523489  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
     ||||||||||||||||||||||||||||| |||||||  | |||| ||||||||||||||||    
T  52523490 acacctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatgc 52523552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 40213352 - 40213555
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  40213352 agatttcgtgattttgacttttgagttgatcattagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 40213451  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  |||||||| |||||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| ||||||||    
T  40213452 tggaaagattgtagaatgaacttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 40213551  T
Q  202 tagg 205  Q
    ||||    
T  40213552 tagg 40213555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 49389274 - 49389443
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  49389274 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 49389373  T
Q  101 cggga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    | ||| | | ||| |||||||| ||||| ||  || ||||||||||||||| ||||| ||||| ||||||||    
T  49389374 ctggagagacttt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggttctcgcct 49389443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 16104268 - 16104024
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc-g 102  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| |||||||| ||||||| |    
T  16104268 atttcgtaattttgacttttgagttgatccttagatgtttctgagtgcctgaacatgtctaataatgattaggaaagattggagaatgaggttgaacctg 16104169  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    |||| | ||| ||| |||| ||||| || ||| | | ||||||| | | ||||| |||||||||||||| |  |||      |||||||| ||||||| |    
T  16104168 ggaagacttt-agattgaa-ttttgtgaattgaatccgaactcgtcgtggcgagcagaggctctcgcctcgtgagtactggtgttacagactgccttgtt 16104071  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||| |||||||| |||||||||||||||||| |||||    
T  16104070 taggttaaatgcgctctttgtcgcacgagttgatgtgagttaatctt 16104024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 14973344 - 14973141
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  14973344 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacc 14973245  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     | ||   ||| |||| ||| |||||| | |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| ||||||||    
T  14973244 agaaaagattttagaaagaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgt 14973145  T
Q  202 tagg 205  Q
    ||||    
T  14973144 tagg 14973141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 9513401 - 9513152
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| | |||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||  |||||||||||||||    
T  9513401 cagatttcgtactattgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaac 9513302  T
Q  101 cgggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttac-ccagttacagaatgcct 198  Q
    | | ||   ||| |||||| |||||||| ||  |  |||||||||| |||| ||||| |||||||||||||| |  | ||||    ||||||||||||||    
T  9513301 ctgaaaagattttagaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcgaga-ttacttgtgttacagaatgcct 9513203  T
Q  199 tg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    || ||| ||||||||||||||||||| ||| |||| ||||||||| |||||    
T  9513202 tgcttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatctt 9513152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 9521376 - 9521127
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| | |||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||  |||||||||||||||    
T  9521376 cagatttcgtactattgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattagagaatgagattgaac 9521277  T
Q  101 cgggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttac-ccagttacagaatgcct 198  Q
    | | ||   ||| |||||| |||||||| ||  |  |||||||||| |||| ||||| |||||||||||||| |  | ||||    ||||||||||||||    
T  9521276 ctgaaaagattttagaatgaaatttttgtgaactaaacctgaactcaccatggcgagcagaggctctcgcctcgaga-ttacttgtgttacagaatgcct 9521178  T
Q  199 tg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    || ||| ||||||||||||||||||| ||| |||| ||||||||| |||||    
T  9521177 tgcttatgttaaatgcgatctttgtcgcacaagtttatgtgagttaatctt 9521127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 12171750 - 12171982
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||||             |||||||||| |    
T  12171750 atttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaa-------------agattgaacctg 12171836  T
Q  104 ga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    || | | ||| |||||||||||||| ||  || ||||||||| ||||| |||||||||||||||||||| || |  || | ||||||||||||||||| |    
T  12171837 gagagacttt-agaatgaatttttgtgaactgaacctgaactggccatggcgagtagaggctctcgcctcgcgatctaactagttacagaatgccttgtt 12171935  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||  ||||| ||| ||||||||||||||||||||    
T  12171936 taggttaaatgcgattcttgtcgcacaagttgatgtgagttgatctt 12171982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 25476016 - 25476219
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| |||||||||||||||||||||||| ||||| ||||| |||||||||||| |||||| ||||||||||||| |||||    
T  25476016 agattttgtgattttgacttttgagttgatccttagatgtttttgagtacctgaacatgtctaataatgattatgaaagaatgtagaatgagatcgaacc 25476115  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||| ||||||||  ||| ||| |   ||||||||||||||   ||||||||||||||||||| || ||| ||||||  ||||| ||||||||    
T  25476116 tggaaagattttagaatgaaacttttggaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 25476215  T
Q  202 tagg 205  Q
    ||||    
T  25476216 tagg 25476219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 11424394 - 11424635
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||    
T  11424394 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaataatgtagaatgagattgaacc 11424493  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||| | | |   ||||||||||||||  |||||||||||||||||||| || ||  ||| ||  ||||| || ||||    
T  11424494 tggaa-agatttagaatgaaactttttgaactctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagcgacctagaaacagagtgtcttg 11424592  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||   ||||| ||||||  ||||||||| || |||||||    
T  11424593 ttaggtt-tttgcgacctttgttgcacgagttgttgagagttga 11424635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 18439024 - 18438819
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||| ||||||||||||||    
T  18439024 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaaaatgagattgaacc 18438925  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || |||||| | |   ||||||| | ||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||    
T  18438924 tggaa-agatttagaatgaaacttttggaattctgacctgaagttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 18438826  T
Q  201 ttaggtt 207  Q
    |||||||    
T  18438825 ttaggtt 18438819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 26687377 - 26687171
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  26687377 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 26687278  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||    
T  26687277 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 26687178  T
Q  201 ttaggtt 207  Q
    |||||||    
T  26687177 ttaggtt 26687171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 246
Target Start/End: Original strand, 13209959 - 13210203
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||| | ||||| |||| ||||||||||||||  ||||||||||||||||||    
T  13209959 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctaat-atgattaggaaagaaagtagaatgagattgaacc 13210057  T
Q  102 gggaatagtttaagaatg--aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     |||| ||  | ||||||  || | ||| || |   ||| ||||||||||| |||||||||||||||||||| || ||       |||||||||||||||    
T  13210058 tggaa-agacttagaatgaaaactcttgagaatgtgacc-gaactcgccatggcgagtagaggctctcgcctcgcgagcacttgtgttacagaatgcctt 13210155  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    | |||||||||||| |||||||||| ||||||||||||||||||||||    
T  13210156 gtttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatc 13210203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 14573067 - 14572837
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagttt 112  Q
    |||||||||||| |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |||| ||  |    
T  14573067 ttttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agact 14572969  T
Q  113 aagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaat 211  Q
     |||||| ||  ||||| | |   ||||||||||||||| |||||||||||||||||||| || ||| ||| ||  ||||| | ||||||||||||   |    
T  14572968 tagaatgaaacctttggaaatctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctagaaacagagtaccttgttaggtt-ttt 14572870  T
Q  212 gcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||| ||||||  ||||||||| || |||||||    
T  14572869 gcgacctttgttgcacgagttgttgagagttga 14572837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 37250932 - 37251043
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||  ||||||||||||||| | || ||||||| ||||||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaacaccttgttaggttaaaagtgacctttgtcgcacgagttgatg 37251031  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  37251032 tgagttgatctt 37251043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 14179812 - 14179714
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  14179812 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 14179714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 244
Target Start/End: Complemental strand, 42386895 - 42386660
Alignment:
Q  8 cgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    |||| ||||||| |||  ||||| |||||| ||||| ||||||| ||| |||| ||||||||||||||| |||| | |||| || ||||||||| | |||    
T  42386895 cgtagttttgacctttaagttgaaccttagttgtttatgagtgcatgaacatgcataataatgattaggcaagactttagactgtgattgaacctgaaat 42386796  T
Q  108 agtttaagaatgaat-ttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttagg 205  Q
    |||| |||||||||  |||||||||||  ||||||||||||||| |||||||||||||||| ||| || |||| |||| |||||||| |||||| |||||    
T  42386795 agtt-aagaatgaaacttttgggagttatacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaa-gccttgtttagg 42386698  T
Q  206 ttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     |   ||||| ||||||| ||||||||| ||||||||||    
T  42386697 at-tttgcgaactttgtcgcacgagttgttgtgagttga 42386660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 12340242 - 12340000
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  12340242 agatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 12340143  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg- 200  Q
     |||| ||  | ||||||||  |||||    |  | ||||||||||||| ||||| |||||||||||||| || ||        ||||| |||||||||     
T  12340142 tggaa-agacttagaatgaaactttggagaatctaactgaactcgccatggcgagcagaggctctcgcctcgcgagcactagtattacataatgccttgt 12340044  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||| |||||||||| ||||||||| || |||||||    
T  12340043 ttaggttaaatgtgatctttgtcgcacgagttgttgagagttga 12340000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 20698078 - 20698183
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  20698078 agattttgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 20698177  T
Q  102 gggaat 107  Q
     |||||    
T  20698178 tggaat 20698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 17247151 - 17247239
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaat 90  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||    
T  17247151 agatttcgtgattttgacttttgagttgatccttagatgtttttgagtgccggaacatgtctaataatgattaggaaagaatgtagaat 17247239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 43842668 - 43842572
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattga 98  Q
    ||||||| | ||||||||||||  ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||    
T  43842668 agatttcatgattttgactttttagttgatccttagatgcttttgagtgcctgagcatgtctaataatgattaggaaagaatgtaggatgagattga 43842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 14576464 - 14576568
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||||||||||||  ||||||||||||| ||||| |||| |||||||| ||||| |||||||||| ||||||||    
T  14576464 agatttcgtgattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaattatgattagaaaagaatgtagaatgacattgaacc 14576563  T
Q  102 gggaa 106  Q
     ||||    
T  14576564 tggaa 14576568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 14669250 - 14669008
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||||  |||||||||||| ||||| ||||| ||| ||||||||| ||||| |||||||||||||    
T  14669250 agatttcgtgattttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatgtctaatattgaataggaaagaatgtaggatgagattgaacc 14669151  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   | ||||||||||||| ||||| |||||||||| ||| || ||        |||||||||||||||    
T  14669150 tggaa-agacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcacctcgcgagcactagtattacagaatgccttg 14669053  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     ||||||||||| ||||||||||| ||||||||| | ||||||||    
T  14669052 tttaggttaaattcgatctttgtcgcacgagttgttatgagttga 14669008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 17488347 - 17488243
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| | ||||||||||| | |||||||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  17488347 agatttcgtgaatttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 17488248  T
Q  102 gggaa 106  Q
     ||||    
T  17488247 tggaa 17488243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 17499829 - 17499725
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| | |||||||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  17499829 agatttcatgattttgacttttgagatgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 17499730  T
Q  102 gggaa 106  Q
     ||||    
T  17499729 tggaa 17499725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 14666085 - 14665853
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtt 111  Q
    ||||||||||||| ||||| ||||||||||  |||||||||||| ||||  ||||| ||||||||||||| ||||| ||||||||||||| |||| ||      
T  14666085 attttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa-agac 14665987  T
Q  112 taagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaa 209  Q
    | ||||||||  ||||| || |   | |||||||||| || ||||| |||||||||||||| || ||        ||||||||||||||| |||||||||    
T  14665986 ttagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgccttgtttaggttaa 14665888  T
Q  210 atgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||||| ||||||||| | ||||||||    
T  14665887 atgcgatctttgtcgcacgagttgttatgagttga 14665853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 14735598 - 14735366
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtt 111  Q
    ||||||||||||| ||||| ||||||||||  |||||||||||| ||||  ||||| ||||||||||||| ||||| ||||||||||||| |||| ||      
T  14735598 attttgacttttgagttgaaccttagatgtcgttgagtgcctgaacatggctaatattgattaggaaagaatgtaggatgagattgaacctggaa-agac 14735500  T
Q  112 taagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaa 209  Q
    | ||||||||  ||||| || |   | |||||||||| || ||||| |||||||||||||| || ||        ||||||||||||||| |||||||||    
T  14735499 ttagaatgaaactttggagaatctga-ctgaactcgcaatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgccttgtttaggttaa 14735401  T
Q  210 atgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||||| ||||||||| | ||||||||    
T  14735400 atgcgatctttgtcgcacgagttgttatgagttga 14735366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 79
Target Start/End: Complemental strand, 12399685 - 12399608
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaa 79  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||    
T  12399685 agattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaa 12399608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 23082991 - 23083162
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| || ||||||||||||| ||||||||||||||| |||||||||||||   |||| ||||| ||||||||| | | ||||| ||||||||| ||    
T  23082991 cagattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctggatatgtctaatagtgattaggacaaaatgtaggatgagattggac 23083090  T
Q  101 cgggaatagtttaagaatgaa--tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    | |||| || || ||||||||  |||||||    ||  ||| |||||||||| ||||||||||||||||||||    
T  23083091 ctggaa-agatttagaatgaaactttttggattctgacccttaactcgccatggcgagtagaggctctcgcct 23083162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 30030318 - 30030213
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||| ||||||||||| ||||| |||||||||  |||||||| |||| ||||| |||||||||||| |||||| ||| | |||||||||||||    
T  30030318 agatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaataatgattacgaaagaatgtgggatgagattgaacc 30030219  T
Q  102 gggaat 107  Q
     |||||    
T  30030218 tggaat 30030213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 4588457 - 4588545
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  4588457 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 4588545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 129
Target Start/End: Original strand, 605946 - 606049
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||   |||||||||||||||||| ||  || |||| |||||||||||| |||| ||||||| |||| |||||    
T  605946 gttgaaccttagatgattttgagtgcctgaatgtgtataataatgattaggcaattttctagattgagattgaacctggaaaagtttaaaaatggatttt 606045  T
Q  126 tggg 129  Q
    ||||    
T  606046 tggg 606049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 204
Target Start/End: Complemental strand, 13442724 - 13442561
Alignment:
Q  42 ttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatg-aatttttgggagttgcacctg 140  Q
    |||||||||||||| ||||| ||||||||||||||||| | ||||| ||||||||||||| ||||   ||  |||||| || || ||||| |   |||||    
T  13442724 ttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacctggaaagattgtagaatgaaacttgtgggattctgacctg 13442625  T
Q  141 aactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    |||| ||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||||||    
T  13442624 aacttgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttag 13442561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 12851995 - 12852092
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaa 99  Q
    ||||||||| ||||||||||||| ||| | | |||||||   |||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||    
T  12851995 agatttcgtgattttgacttttgagtttaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaa 12852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 22110116 - 22110225
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| || || |    ||  ||||||  |||||||||||| |||| || ||||||| ||||| ||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgagctcaagagggacagaacaccttgttaggtttaatgtgacctttgtcgcacgaattgatg 22110215  T
Q  237 tgagttgatc 246  Q
    ||||||||||    
T  22110216 tgagttgatc 22110225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 23275207 - 23275106
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||||||  || | ||||||| |||| |||||    
T  23275207 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttt 23275108  T
Q  126 tg 127  Q
    ||    
T  23275107 tg 23275106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 16809875 - 16809774
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||| ||| |||||||||| ||| |||    |||||||||||||||||| ||||| |||||||||| ||    
T  16809875 agatttcgtatttttgacttttgagttgaaccttaaatgcttttgagtgcttgaacat----aataatgattaggaaagaatgtaggatgagattgatcc 16809780  T
Q  102 gggaat 107  Q
     |||||    
T  16809779 tggaat 16809774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 22109938 - 22110005
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||| || |||  ||||||||||||    
T  22109938 ttagatgtttttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacc 22110005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 43927638 - 43927543
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| |||||||||||||| |||||||||||||||||||  ||| || |||| |||| ||||||| || | ||||||| |||| |||||||||    
T  43927638 ttagatgattttgagtgcctgaacatgtataataatgattagacaagtttttagattgagtttgaacctgggaaagtttaaaaatggatttttggg 43927543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 12378456 - 12378359
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||| ||||||||||||||  ||||| ||||||||||||| | | || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  12378456 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcatgtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 12378359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 14501665 - 14501564
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||| ||| || |  |||||| |||| |||||    
T  14501665 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggcaaggttttagattgagattggacctgggaaggtttaaaaatggatttt 14501566  T
Q  126 tg 127  Q
    ||    
T  14501565 tg 14501564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 15877460 - 15877513
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  15877460 agatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctga 15877513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 23412828 - 23412929
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| |||||||| ||| || | ||||||| |||| |||||    
T  23412828 gttgaaccttagatgattttgagtgcctgaatatgtataaaaatgattaggcaagtttttagattgagattggacctgggaaagtttaaaaatggatttt 23412927  T
Q  126 tg 127  Q
    ||    
T  23412928 tg 23412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 43927484 - 43927380
Alignment:
Q  142 actcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagt 241  Q
    |||||||||||||||||||||||||||||| || ||       |  ||||||| |||||||||| |||||| || ||||||| |||||||||||||||||    
T  43927484 actcgccatagcgagtagaggctctcgcctcgcgagcccttgtgagacagaataccttgttaggataaatgtgacctttgtcgcacgagttgatgtgagt 43927385  T
Q  242 tgatc 246  Q
    |||||    
T  43927384 tgatc 43927380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 316654 - 316592
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagatt 96  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||    
T  316654 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatt 316592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 37250775 - 37250869
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgg 128  Q
    ||||||| || |||||  |||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| ||||||||    
T  37250775 ttagatgattctgagtatctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttgg 37250869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 17674209 - 17674258
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  17674209 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 17674258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 45797701 - 45797608
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttg 127  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||| ||| || |  |||||| |||| |||||||    
T  45797701 ttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctgggaaggtttaaaaatggatttttg 45797608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 21837958 - 21837866
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaattttt 126  Q
    ||||||| ||||||||| ||||  ||||||||||||||||||| ||| || |||| |||||||||||  || | ||||||| |||| ||||||    
T  21837958 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggattttt 21837866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 186 - 244
Target Start/End: Original strand, 4588602 - 4588661
Alignment:
Q  186 ttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||||||||| | ||||||||    
T  4588602 ttacagaatgccttgtttaggttaaatgcgagctttgtcgcacgagttgttatgagttga 4588661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 9578136 - 9578070
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||  ||||||||||||| ||||||| |||||||||||| |||||| |||| ||| |||||||    
T  9578136 ttagatgactttgagtgcctgaacatgtatgataatgattaggcaagattttagattgaaattgaac 9578070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 3402600 - 3402649
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  3402600 attttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 3402649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 49389453 - 49389506
Alignment:
Q  196 ccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||    
T  49389453 ccttgtttaggttaaatgcgatccttgtcgcacgagttgatgtgtgttgatctt 49389506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 321657 - 321697
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  321657 ttttgacttttgagttgaaccttagatgtttttgagtgcct 321697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 12173261 - 12173221
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  12173261 ttttgacttttgagttgaaccttagatgtttttgagtgcct 12173221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 12496734 - 12496690
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  12496734 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 12496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 15060771 - 15060727
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  15060771 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15060727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 17524817 - 17524857
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  17524817 ttttgacttttgagttgaaccttagatgtttttgagtgcct 17524857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 18383556 - 18383600
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  18383556 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 18383600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 201 - 244
Target Start/End: Complemental strand, 14501414 - 14501371
Alignment:
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||||||||||||||||||||| ||||||| | ||||||||    
T  14501414 ttaggttaaatgcgatctttgtcacgcgagttgttatgagttga 14501371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 242
Target Start/End: Complemental strand, 43841287 - 43841183
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgat 235  Q
    |||||||||||||| |||||| | |||| ||||||| || ||| ||||||  ||||| || |||||||||||   ||||| |||||| |||||||||| |    
T  43841287 acctgaactcgccacagcgagcaaaggccctcgcctcgcgagtgacccagaaacagagtgtcttgttaggtt--ttgcgacctttgttacacgagttgtt 43841190  T
Q  236 gtgagtt 242  Q
    | |||||    
T  43841189 gagagtt 43841183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 323068 - 323026
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgc 51  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||    
T  323068 gtaattttgacttttgagttgaaccttagatgcttttgagtgc 323026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 603306 - 603440
Alignment:
Q  37 gatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagttgca 136  Q
    ||||||| |||| |||||| ||||||  |||||||||||| ||  || |||| |||||||||||  |||||||  | |||||| ||| ||| | |||  |    
T  603306 gatgtttatgagagcctgaacatgtactataatgattaggcaaagttttagactgagattgaactcggaatagagtcagaatggattcttgagtgtttta 603405  T
Q  137 cctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||  || ||||| | ||||||||||||||||||||    
T  603406 ccctaaatcgccgtggcgagtagaggctctcgcct 603440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 11852055 - 11852006
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||| ||||||  ||||| ||||||||| ||||||||||||    
T  11852055 atttcgtaattttaacttttcagttgaaccttagatgcttttgagtgcct 11852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 19725546 - 19725595
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||||||||||| ||||| ||||| ||| ||||| ||||||    
T  19725546 atttcgtaattttgacttttgagttgaaccttaaatgcttttgtgtgcct 19725595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 1982456 - 1982500
Alignment:
Q  5 tttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    ||||||| ||| |||||||| ||||| ||||||||||||||||||    
T  1982456 tttcgtattttggacttttgagttgaaccttagatgtttttgagt 1982500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 3389600 - 3389640
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  3389600 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3389640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 11298172 - 11298212
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  11298172 ttttgacttttgagttgaaccttagatgcttttgagtgcct 11298212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 12037586 - 12037638
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||| |||||||| | || ||| | ||||||||||||||||||||||||    
T  12037586 gatttcgtgattttgacatgtgagttaaaccttagatgtttttgagtgcctga 12037638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 14878148 - 14878188
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||| ||||||||||||||||    
T  14878148 ttttgacttttgagttgaaccttatatgtttttgagtgcct 14878188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 15051995 - 15051951
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||| ||||||| ||||| ||||||||| ||||||||||||    
T  15051995 gtaattttaacttttgagttgaaccttagatgcttttgagtgcct 15051951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 16839439 - 16839471
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  16839439 tgaactcgccatagcgagtagaggcgctcgcct 16839471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 20698202 - 20698270
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||||||    
T  20698202 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 20698270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 26190652 - 26190692
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  26190652 ttttgacttttgagttgaaccttagatgcttttgagtgcct 26190692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 147; Significance: 1e-77; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 15099839 - 15099593
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||| ||| ||||||| |||  || || |||||||||||||||||||||||| | ||||| || ||||||||||||||||||||| ||||||||||||     
T  15099839 gattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctgaacttgtatgatgatgattaggaaagattgtagattgagattgaacct 15099740  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| || || || |||||||||||||| |||| |    
T  15099739 ggaatagtttaagaatgaatttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgtcttgtt 15099640  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||    
T  15099639 taggttaaaagcgatctttgtcgcatgagttgatgtgagttgatctt 15099593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 39705920 - 39706165
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | ||||||||||     
T  39705920 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagattaagattgaacct 39706019  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||| ||||||| || |  | |||||||||||||||| ||| |    
T  39706020 ggaatagtttaagaacgaa-ttttgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaatgctttgtt 39706118  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  39706119 taggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 39706165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 8846866 - 8846621
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  8846866 cagatttcgtaattttgacttttgagttgattcttagatgtttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 8846767  T
Q  101 cgggaatagtttaagaatgaat-ttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    | ||||   ||| ||||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||| || || || | |||||||||||| |||    
T  8846766 ctggaaagattttagaatgaattttttgtgagttgcaccttaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtctt 8846667  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    | ||| ||||||||||||||||||| ||||||||||||||||||||    
T  8846666 gtttatgttaaatgcgatctttgtcgcacgagttgatgtgagttga 8846621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 32 - 248
Target Start/End: Complemental strand, 15190777 - 15190560
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggag 131  Q
    |||||||||||||||||||||||| ||||| |||| |||||||| |||| || |||| ||||||| |||| ||||||||||||||||| ||||||||| |    
T  15190777 ccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaaggttctagattgagatttaacctggaatagtttaagaatggatttttgggcg 15190678  T
Q  132 ttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgag 230  Q
    || || ||| ||||||||| |||||||||||||||||||| || || || ||||||||||||||||||| |||||||||| |||||||||||| ||||||    
T  15190677 ttacatctgtactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtttaggttaaaagcgatctttgtcgcacgag 15190578  T
Q  231 ttgatgtgagttgatctt 248  Q
    ||||||||||||||||||    
T  15190577 ttgatgtgagttgatctt 15190560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 34 - 196
Target Start/End: Original strand, 52242856 - 52243018
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| ||| |||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  52242856 ttagatgatttcgagtgcctgaacatgtataataatgatcaggaaagattctagaatgagattgaacctggaatagtttaagaatgcattgttgggagtt 52242955  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
     ||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||    
T  52242956 acacctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgc 52243018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 12774489 - 12774242
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||| |||||||||||||||    
T  12774489 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattagaaaagattggagaatgagattgaac 12774390  T
Q  101 cggga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    | ||| | |  || |||||||| ||||| ||  || ||||||||||||||| ||||| |||||||||||||| || |||      |||||||| ||||||    
T  12774389 ctggagagacgtt-agaatgaa-ttttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagactgcctt 12774292  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  12774291 gtttaggttaaatgcgatccttgtcgcacgagttgatgtgagttgatctt 12774242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 15464562 - 15464760
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    |||||||| |||||||  ||  ||||||  ||||||| ||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||||| |    
T  15464562 atttcgtagttttgacccttaagttgatatttagatgattttgagtgcctgaatatgtataataatgattaggaaagattttagattgagattgaacctg 15464661  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
     ||||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||    
T  15464662 aaatagtttaagaatggatttttgggtgttacacctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtt 15464760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 44928554 - 44928748
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||| ||| ||||||||||||| ||||||||||| |||||||||||||||||| ||| | ||||||||||||||||||| |||||||||||||||||||    
T  44928554 agattccgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatatctaataatgattaggaaagaatgtagaatgagattgaacc 44928653  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
     ||||   ||| ||||||||  ||||||| |   ||| ||||||||||| ||||| |||||||||||||| || ||| |||||||||||||||||    
T  44928654 tggaaagattttagaatgaaactttgggaatctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgc 44928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 43198220 - 43198381
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||| |||||||  ||  ||| | |||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||      
T  43198220 gatttcgtagttttgacccttaagttaaaccttagatgtttttgagtgcctgaacatgtgtaataatgattaggaaagattttagattgagattgaacat 43198319  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggct 164  Q
    ||||||||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||||    
T  43198320 ggaatagtttaagaattgatttttgggagttacacctgaactcaccatagcgagtagaggct 43198381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 13845028 - 13844860
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||| |||| ||||| |||| |||||||| ||||||| ||||   ||||| ||||     
T  13845028 gatttcgtaattttgacttttaagttgaaccttagatgtttttgagtgtctgaacatgtctaattatgattagaaaagattctagatcaagatttaacct 13844929  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||| ||||||||||||| |||||| ||| ||||| ||||||||||||||||||||    
T  13844928 ggaatagtttaagaatggatttttgggagttacacctgtacttgccatggcgagtagaggctctcgcct 13844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 21814936 - 21815132
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||| | |||||||| | |||||| |    
T  21814936 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21815035  T
Q  104 gaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    || ||  ||||||||||| ||||||| || || || |||||||||||| |||||||||||||||||||| || |||| |||| |||||||| ||||||||    
T  21815036 gatta-attaagaatgaactttttggaagctg-acttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtt 21815132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 21815265 - 21815461
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||| | | |||||||| | |||||| |    
T  21815265 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaataatttagaatgataatgaacctg 21815364  T
Q  104 gaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    || ||  ||||||||||| ||||||| || || ||||||||||||||| |||||||||||||||||||| || |||| |||| |||||||| ||||||||    
T  21815365 gatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtt 21815461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 202
Target Start/End: Original strand, 21818358 - 21818554
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||| | |||||||| | |||||| |    
T  21818358 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtttaataatgattaggaaagaatttagaatgataatgaacctg 21818457  T
Q  104 gaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    || ||  ||||||||||| ||||||| || || || |||||||||||| |||||||||||||||||||| || |||| |||| |||||||| ||||||||    
T  21818458 gatta-attaagaatgaactttttggaagctg-acttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtt 21818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 14039139 - 14038935
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||    
T  14039139 agatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgatttggaaagaatgtagaatgagattgaacc 14039040  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      |||   ||| |||||| || |||||| | |   ||| ||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  14039039 tagaaagattttagaatgaaacttttggaaatctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 14038940  T
Q  201 ttagg 205  Q
    |||||    
T  14038939 ttagg 14038935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 15091387 - 15091183
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||||||||  |||| ||||| ||||| ||||||||||||| |||||||||||||||||||    
T  15091387 agatttcgtgattttgacttttgagttgatctttagatgcttttgagtttctgaacatgtctaatattgattaggaaagaatgtagaatgagattgaacc 15091288  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||| |||||| || |||||| | |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  15091287 tggaaggattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 15091188  T
Q  201 ttagg 205  Q
    |||||    
T  15091187 ttagg 15091183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 24029231 - 24028989
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||    
T  24029231 agatttcgtgattttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgtctaatattgattatgaaagaatgtaggatgagattgaacc 24029132  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   | ||||||||||||| ||||| |||||||||||||| || ||        |||||||||||||||    
T  24029131 tggaa-agacttagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgccttg 24029034  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     ||||||||||||||||||||||| ||||||||| | ||||||||    
T  24029033 tttaggttaaatgcgatctttgtcgcacgagttgttatgagttga 24028989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 16377153 - 16377356
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| ||||||||||||||| ||||||| | |||| ||||| ||||||||||||||||| | ||||| |||||||||||||    
T  16377153 agatttcatgattttgacttttgagttgatccttagatgcttttgagcgtctgaacatgtctaataatgattaggaaataatgtaggatgagattgaacc 16377252  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     |||||  |   |||||||| |||||||| |   ||||||||||||||  ||||| ||||||||||||||  | ||| ||||||  ||| | ||||||||    
T  16377253 tggaatgatcgtagaatgaacttttgggaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacatagtgccttgt 16377352  T
Q  202 tagg 205  Q
    ||||    
T  16377353 tagg 16377356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 44102697 - 44102508
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||| | |||| ||||| ||||||||||||| |    
T  44102697 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgagcatgtttaataatgattatg-aagaatgtaggatgagattgaacctg 44102599  T
Q  104 gaatag-tttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaat 194  Q
    | |||| ||| ||||| ||  |||| || |   ||||||||||||||| ||||| |||||||||||||| || ||| ||| | |||||||||    
T  44102598 g-atagattttagaataaaactttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaat 44102508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 16239623 - 16239728
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaag-attgtagaatgagattgaac 100  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||||||    
T  16239623 agatttcgtaattttgacttttgagttgctccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaatgtagaatgagattgaac 16239722  T
Q  101 cgggaa 106  Q
    | ||||    
T  16239723 ctggaa 16239728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 3097122 - 3097017
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||| ||| | ||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  3097122 agatttcataattttgacttttgagttaaaccttagatgttttcgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 3097023  T
Q  102 gggaat 107  Q
     |||||    
T  3097022 tggaat 3097017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 7089356 - 7089251
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| |||||||||  | ||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  7089356 agatttcgtaattttgacttttgagttgaaccttagatgcctatgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 7089257  T
Q  102 gggaat 107  Q
     |||||    
T  7089256 tggaat 7089251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 12903235 - 12903131
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  12903235 agatttcgtaattttgacttttgagttgaaccttagatgcttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 12903137  T
Q  102 gggaat 107  Q
     |||||    
T  12903136 tggaat 12903131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 248
Target Start/End: Complemental strand, 16597128 - 16596890
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaata 108  Q
    |||||||||| |||||  |||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |||| |    
T  16597128 gtaattttgatttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-a 16597030  T
Q  109 gtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggtt 207  Q
    |  | |||||| || ||| | || |   ||| ||||||||||| ||||||||||| |||||||  ||  |       ||||||||||||||| |||||||    
T  16597029 gacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagtagaggttctcgccccgcgggcgtttgtgttacagaatgcctttttaggtt 16596931  T
Q  208 aaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     |||| ||||||||||   ||||||||||||||||||||||    
T  16596930 gaatgtgatctttgtcgttcgagttgatgtgagttgatctt 16596890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 6190913 - 6190819
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaa 106  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||| ||||||||||||| ||||    
T  6190913 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctggaa 6190819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 15552303 - 15552199
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||| ||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||| |||    
T  15552303 agatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacc 15552204  T
Q  102 gggaa 106  Q
     ||||    
T  15552203 tggaa 15552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 20156921 - 20157163
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||| |||||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  20156921 agatttcgtgattttgacttttgagttaatccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 20157020  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||  | ||| |||||||  ||||  || |   || |||||||||||| ||| | |||||||||||||| || ||        ||||||| |||||||    
T  20157021 tggaaaggctta-gaatgaaactttgaagaatatgac-tgaactcgccatggcgtgcagaggctctcgcctcgcgagcactagtattacagagtgccttg 20157118  T
Q  201 tt-aggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    || ||||||||||||||||||||| ||||||||| | ||||||||    
T  20157119 tttaggttaaatgcgatctttgtcgcacgagttgttatgagttga 20157163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 44053319 - 44053116
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||| ||||||| ||||| |||||||||||||    
T  44053319 agatttcatgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattgggaaagaatgtaggatgagattgaacc 44053220  T
Q  102 gggaatagttta-agaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     | || || ||| || ||| || || ||||| |   ||||||||||||||  ||||| |||| ||||||||| || ||| ||||||  ||||| ||||||    
T  44053219 tgtaa-agattataggatgaaacttgtgggattctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgcctt 44053121  T
Q  200 gttag 204  Q
    |||||    
T  44053120 gttag 44053116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 22633844 - 22634086
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| | |||||||   |||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  22633844 agatttcgtgattttgacttttgagttgaactttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 22633943  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg- 200  Q
     |||| ||  | ||||||||  |||||    |     |||||||||||| ||||| |||||||||||||| || ||       ||||||||||||||||     
T  22633944 tggaa-agacttagaatgaaactttggataatcagattgaactcgccatggcgagcagaggctctcgcctcgcgagcacttgtgttacagaatgccttgt 22634042  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||||||||||||||||||| ||||| ||| | ||||||||    
T  22634043 ttaggttaaatgcgatctttgtcgcacgatttgttatgagttga 22634086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 14052948 - 14053042
Alignment:
Q  6 ttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||| |||||||||||| ||||| ||||||||| ||||||||||||||  |||| ||||||||||||||||||| ||||| ||||||||||||    
T  14052948 ttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaac 14053042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 22636924 - 22636718
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || |||||||||| || ||||||||||||||| ||||||||| ||||  |||| ||||||||||||||||||| ||||| |||||||||||||    
T  22636924 agattttgtgattttgacttctgagttgatccttagatgcttttgagtgtctgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22636825  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| | ||  |||||| || || ||||| |   || ||| |||||||  ||||| ||||||||||||||  | ||| ||||||  ||||| || ||||    
T  22636824 tggaaaaattgtagaatgaaacttgtgggattctgacttgacctcgccacggcgagcagaggctctcgcctcacgagtgacccagaaacagagtgtcttg 22636725  T
Q  201 ttaggtt 207  Q
    |||||||    
T  22636724 ttaggtt 22636718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 7799187 - 7799083
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||||||||| ||||  ||||||||||||||| | | ||||| |||||||||||||    
T  7799187 agatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgactaataatgattaggacataatgtaggatgagattgaacc 7799088  T
Q  102 gggaa 106  Q
     ||||    
T  7799087 tggaa 7799083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 13812440 - 13812682
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| |||||||||  |||||||| |||| ||||| ||||| ||||||||||| | ||||| |||||||||||||    
T  13812440 agatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgtctgaacatgtctaatattgattaggaaataatgtaggatgagattgaacc 13812539  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   || | |||||||||| ||||| |||||||||||||| || ||        ||||||||||| |||    
T  13812540 tggaa-agacttagaatgaaactttggagaatctgac-taaactcgccatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgctttg 13812637  T
Q  201 tt-aggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    || |||||||||| |||||||||| ||||||||| | ||||||||    
T  13812638 tttaggttaaatgtgatctttgtcgcacgagttgttatgagttga 13812682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 100
Target Start/End: Original strand, 17047726 - 17047813
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||| ||||| |||||||||| ||||||||||||| ||||  ||||||||||||||||| | ||||| ||||||||||||    
T  17047726 ttttgacttttgagttgaaccttagatgtctttgagtgcctgaacatgactaataatgattaggaaaaaatgtaggatgagattgaac 17047813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 15868290 - 15868391
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||||||| || |||| |||||||||||| || | ||||||| |||  |||||    
T  15868290 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggaaagtttttagattgagattgaacctgggaaagtttaaaaatagatttt 15868389  T
Q  126 tg 127  Q
    ||    
T  15868390 tg 15868391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 43198380 - 43198426
Alignment:
Q  197 cttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttg 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  43198380 cttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttg 43198426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 12287794 - 12287891
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||||||||||| | |||| |||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  12287794 ccttagatgtttctaagtgtctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 12287891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 246
Target Start/End: Original strand, 46640223 - 46640330
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    ||||||||||||| | |||||||||||||||||||| ||       |  ||||||| ||||||||||||||||| || ||||||| ||||||||||||||    
T  46640223 tgaactcgccataacaagtagaggctctcgccttgcgagcccttgtgagacagaataccttgttaggttaaatgtgacctttgtcgcacgagttgatgtg 46640322  T
Q  239 agttgatc 246  Q
    ||||||||    
T  46640323 agttgatc 46640330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 53081760 - 53081854
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgg 128  Q
    ||||||| || ||||||||| | |||||||||||||||||| | ||| || |||| |||||||||||| |||| ||||||| |||| ||||||||    
T  53081760 ttagatgattctgagtgcctaaacatgtataataatgattaagcaagtttttagattgagattgaacctggaaaagtttaaaaatggatttttgg 53081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 13436 - 13516
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaa 114  Q
    ||||||| |||||||||||||| || ||||||||||||||||| ||| || |||| |||||||||||| || | |||||||    
T  13436 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 53081915 - 53082026
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||| | || ||       |  ||||||  ||||||||||||||||| ||  |||||| ||||||||||||    
T  53081915 cctgaactcgccatagcgagtagaggctctcgcgtcgcgagcccttgtgagacagaacaccttgttaggttaaatgtgacatttgtcgcacgagttgatg 53082014  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  53082015 tgagttgatctt 53082026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 32851917 - 32851816
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||  ||| || |||| |||||||| ||| || |  |||||| |||| |||||    
T  32851917 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattggacctgggaaggtttaaaaatggatttt 32851818  T
Q  126 tg 127  Q
    ||    
T  32851817 tg 32851816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 15552121 - 15552058
Alignment:
Q  185 gttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||| |||| ||| |||||| ||||||||||||||||   ||||||||||||||||||||||    
T  15552121 gttacaaaatgtctttttaggtaaaatgcgatctttgtcgttcgagttgatgtgagttgatctt 15552058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 17333815 - 17333721
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac-cgggaatagtttaagaatgaatttttgg 128  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||| ||| || |||| ||||||||||| || ||| ||||||| |||| ||||||||    
T  17333815 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacacgagaa-agtttaaaaatggatttttgg 17333721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 46640043 - 46640138
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| || ||||||||||| |||||| ||||||||||||| ||| || |||| ||||||| ||||  | | ||||||| |||| |||||||||    
T  46640043 ttagatgattctgagtgcctgaacatgtaaaataatgattaggcaagtttttagattgagattaaacctaggaaagtttaaaaatggatttttggg 46640138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 32306582 - 32306648
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||| | |||||||||||||||||||| ||| || |||| ||| |||||||    
T  32306582 ttagatggttttgagtgcctaaacatgtataataatgattaggcaagtttttagattgaaattgaac 32306648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 44676108 - 44676047
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||||||| ||||| |||||||||||||||||||||| |  |||| || |||||||||    
T  44676108 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 44676047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 233
Target Start/End: Complemental strand, 3332192 - 3332144
Alignment:
Q  186 ttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttg 233  Q
    ||||||||||||||||| ||||||||||||||||||||| || ||||||    
T  3332192 ttacagaatgccttgtttaggttaaatgcgatctttgtcgcatgagttg 3332144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 12903112 - 12903044
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  |||||||||||||| ||||| || ||| ||||||  ||||| |||||||||||    
T  12903112 acctgaactcgccacggcgagtagaggctcccgcctcgcgagtgacccagaaacagagtgccttgttag 12903044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 13569988 - 13569948
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  13569988 ttttgacttttgagttgaaccttagatgtttttgagtgcct 13569948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 14053068 - 14053136
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    |||||||||| |||| ||||| ||||||||||||||||| ||| ||||||  ||||| || ||||||||    
T  14053068 acctgaactcaccatggcgagcagaggctctcgccttgcgagtgacccagaaacagagtgacttgttag 14053136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 15094249 - 15094209
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  15094249 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15094209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 15121446 - 15121486
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  15121446 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15121486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 16348331 - 16348375
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  16348331 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16348375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 17046765 - 17046721
Alignment:
Q  43 tttgagtgcctgagcatgtataataatgattaggaaagattgtag 87  Q
    ||||||||||||| ||||| ||||||||||||||||||| |||||    
T  17046765 tttgagtgcctgaacatgtctaataatgattaggaaagaatgtag 17046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 23843955 - 23843915
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  23843955 ttttgacttttgagttgaaccttagatgtttttgagtgcct 23843915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 13616 - 13726
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||||||||||||||||||||| ||||||| || |||      |  ||||||  |||||| ||||| | || |  ||||||| |||||||||||||    
T  13616 ctgaactcgccatagcgagtagaggccctcgcctcgcgagtccttgtgagacagaacaccttgtaaggtttattgtgtcctttgtcgcacgagttgatgt 13715  T
Q  238 gagttgatctt 248  Q
    |||||||||||    
T  13716 gagttgatctt 13726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 152603 - 152537
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| ||| |||||||    
T  152603 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaac 152537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 12287974 - 12288008
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||| ||||||||||    
T  12287974 cctgaactcgccatagcgagtagaagctctcgcct 12288008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 15792309 - 15792243
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||| ||||  ||||||||||||||||||| ||| || |||| ||| |||||||    
T  15792309 ttagatgattttgagtgtctgaatatgtataataatgattaggcaagtttttagattgaaattgaac 15792243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 26789872 - 26789806
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  ||||||||||| ||||||| ||| || |||| ||| |||||||    
T  26789872 ttagatgattttgagtgcctgaatatgtataataacgattaggcaagtttttagattgaaattgaac 26789806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 17047838 - 17047903
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
    ||||||||||||||| ||||| |||||||||||||| || ||| |||| |  ||||| ||||||||    
T  17047838 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgccttgt 17047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 3096998 - 3096930
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||||||    
T  3096998 acctgaactcgccaaggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 3096930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 7089232 - 7089164
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||| ||||| |||||||||||||| || ||| |||| |  ||||| || ||||||||    
T  7089232 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccggaaacagagtgtcttgttag 7089164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 12570497 - 12570457
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||| || ||||| ||||||||||||||||||||||    
T  12570497 ttttgacttgtgagttgaaccttagatgtttttgagtgcct 12570457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 16356596 - 16356636
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  16356596 ttttgacttttgagttgaaccttagatgcttttgagtgcct 16356636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 621 - 373
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||||||||||||||||  ||||||||||||  ||||||||||||| | ||||| |||||||||||||||||||||| |||||||||||||||    
T  621 cagatttcgtaattttgacttttgaattgatccttagacttttttgagtgcctaaacatgtctaataatgattaggaaagattggagaatgagattgaac 522  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||||   ||| |||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||| || ||| |||||||||||||||| ||||    
T  521 ttggaaagattttagaatgaatttttgtgagttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgtcttg 422  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||| |||||||||||||||||||  |||||||||||||||||||||||    
T  421 cttatgttaaatgcgatctttgtcgtacgagttgatgtgagttgatctt 373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 145; Significance: 2e-76; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 130398 - 130150
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||| || | |||||||| ||||||| |||| |||||||||||    
T  130398 cagatttcgtaattttgacttttgagttgatcctttgatgtttttgagtgcctgaacatgtctagttatgattagaaaagattctagattgagattgaac 130299  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||||||||||||||| |||||||||| || ||||| |||||||||| ||||| |||||||||||||| || || || | ||||||| |||||||||    
T  130298 ctggaatagtttaagaatggatttttgggaattacacctaaactcgccatggcgagcagaggctctcgcctcgcgagctaactagttacaaaatgccttg 130199  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  130198 tttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatctt 130150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 137 - 194
Target Start/End: Original strand, 60479 - 60536
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaat 194  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaat 60536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 60301 - 60396
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| || ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||  || | ||||||| |||| |||||||||    
T  60301 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagtttaaaaatggatttttggg 60396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 26 - 248
Target Start/End: Original strand, 7712 - 7934
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||||||  |||| ||||||||||||  ||||||||||||||||||||||    
T  7712 gttgaaccttagatgtttttgagtgtctgaacatgtgtaataatgattaggaaagatcctagactgagattgaacctagaatagtttaagaatgaatttt 7811  T
Q  126 tgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcac 225  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| || |||||||  ||| |||||||||||| |||||||||||||||||||||| |    
T  7812 tgggggttacacctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccttgttccagaatgccttgctaggttaaatgcgatctttgtcgc 7911  T
Q  226 acgagttgatgtgagttgatctt 248  Q
    | || ||||||||||||||||||    
T  7912 aagaattgatgtgagttgatctt 7934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 244
Target Start/End: Complemental strand, 7102 - 6860
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| | ||||||||||     
T  7102 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacct 7003  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||| |||||||||||| ||||||| || || || ||||||| ||||||| ||| |    
T  7002 ggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtt 6903  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  6902 taggttaaatgcgatctttgtcgcacgagttgatgtgagttga 6860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 244
Target Start/End: Complemental strand, 14482 - 14240
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| | ||||||||||     
T  14482 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattaagattgaacct 14383  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||||| |||||||||| || |||||||||||||||| |||||||||||| ||||||| || || || ||||||| ||||||| ||| |    
T  14382 ggaatagtttaagaatggatttttgggaattacacctgaactcgccatggcgagtagaggccctcgcctcgcaagctaaccagttatagaatgcattgtt 14283  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  14282 taggttaaatgcgatctttgtcgcacgagttgatgtgagttga 14240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 34 - 248
Target Start/End: Complemental strand, 32994 - 32780
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| || ||||||||||| ||||| ||||||||||||||||||||| |||| |||||||||||  |||||||| |||||||| |||||||||||||    
T  32994 ttagatgattctgagtgcctgaacatgtgtaataatgattaggaaagattctagattgagattgaacttggaatagtctaagaatggatttttgggagtt 32895  T
Q  134 gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttg 233  Q
     |||||||||||||||| |||||||||||| ||||||| || || |||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  32894 acacctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgttgggttaaatgcgatctttgtcgcacgagttg 32795  T
Q  234 atgtgagttgatctt 248  Q
    |||||||||||||||    
T  32794 atgtgagttgatctt 32780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 51517 - 51718
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||| ||||||||||||| |    
T  51517 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 51616  T
Q  104 gaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||   ||   ||||| || || ||||| ||  ||||||||||||||  ||||| |||||||||| ||| |||||| ||||||  ||||| || ||||||    
T  51617 gaaagattgtcgaatgaaacttgtgggattttgacctgaactcgccacggcgagcagaggctctcacctcgctagtgacccagaaacagagtgacttgtt 51716  T
Q  203 ag 204  Q
    ||    
T  51717 ag 51718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 15462 - 15708
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||||||||| ||||||  ||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||| |||| ||||||||||||     
T  15462 gatttcgtaattttaacttttaagttgaaccttagatgtttttgagtgcctaaacatgtataatgatgattaggaaagattatagattgagattgaacct 15561  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||||| |||||| ||| || ||| |||||||||||| |||||||||||| ||||||| || || || ||||||||||||||||||| |    
T  15562 ggaatagtttaagaatggatttttcggaattacacatgaactcgccatggcgagtagaggccctcgcctcgcgagctaaccagttacagaatgccttgtt 15661  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    || |||||||| |||||||||| ||||||||||||||||||||||||    
T  15662 tatgttaaatgtgatctttgtcgcacgagttgatgtgagttgatctt 15708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 179138 - 179086
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||| ||||||||||||||| ||||  |||||||||||||| |||||||||    
T  179138 gatttcataattttgacttttgagttggaccttagatgtttttcagtgcctga 179086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 5e-74; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 19652686 - 19652438
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  19652686 cagatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattgaagaatgagattgaac 19652587  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||    || |||||||||||||| || ||| ||||||||||||||| |||||||||||||||||||| ||  | || | ||||||| ||| |||||    
T  19652586 ctggaaagactttagaatgaatttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgggctaactagttacaaaataccttg 19652487  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  19652486 tttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatctt 19652438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 23019896 - 23019651
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||| |||||||  ||  ||||| ||||||||| |||||||||||||| ||||| | ||||||||||||||||||| |||| ||||||||||||     
T  23019896 gatttcgtagttttgacccttaagttgaaccttagatgcttttgagtgcctgaacatgtgtgataatgattaggaaagattttagattgagattgaacct 23019797  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||| || ||||  ||| ||||| ||||| | |||    
T  23019796 ggaatattttaagaatgaatttttgggagttacacctgaactcgccatggcgagtagaggcccttgcctcgcgagttgtccaattacaaaatgcttggtt 23019697  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||  |||||||||||||||||||||||    
T  23019696 aggttaaatgcgatctttgtcgaacgagttgatgtgagttgatctt 23019651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 27332916 - 27333161
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||| |||||||||| |||  ||||| ||||||||| ||||||||| |||| |||||||||| |||||||||||||||| ||||||||| |||||||     
T  27332916 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27333015  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||   ||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| || |  | |||| ||||||||||| |||||    
T  27333016 ggaaagattttagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgtt 27333115  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||    
T  27333116 aggttaaatgtgatccttgtcgcacgagttgatgtgagttgatctt 27333161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 27393656 - 27393901
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||| |||||||||| |||  ||||| ||||||||| ||||||||| |||| |||||||||| |||||||||||||||| ||||||||| |||||||     
T  27393656 gatttcataattttgacctttaagttgaaccttagatgcttttgagtggctgaacatgtataatgatgattaggaaagattttagaatgaggttgaacct 27393755  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||   ||| |||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||| || |  | |||| ||||||||||| |||||    
T  27393756 ggaaagattttagaatgaagttttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaatgctttgtt 27393855  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||    
T  27393856 aggttaaatgtgatccttgtcgcacgagttgatgtgagttgatctt 27393901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 4667855 - 4668090
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat-agtt 111  Q
    |||||||||||| | ||| ||||||||| |||||||||||||| || || |||||| |||||||||||| |||||| |||||||| ||| ||||  ||||    
T  4667855 ttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 4667954  T
Q  112 taagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaat 211  Q
    || ||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||| || || |||||| ||||||||||||||| ||||||||||    
T  4667955 ta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaat 4668053  T
Q  212 gcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||| ||||| ||||||||| ||||||||||||||    
T  4668054 gcgatccttgtcgcacgagttgttgtgagttgatctt 4668090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 244
Target Start/End: Complemental strand, 25644811 - 25644571
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||||  |||||||||   ||||||||||||||| |||| ||||||||||||     
T  25644811 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgttcatgtataacgttgattaggaaagattttagattgagattgaacct 25644712  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    | ||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||||| || |||| ||| ||| |||||||| |  ||    
T  25644711 gaaatagtttaagaatggatttttgggagttacacccgaactcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgttt 25644612  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||   ||||||||||||| ||||||||| || |||||||    
T  25644611 aggtt-tttgcgatctttgtcgcacgagttgctgagagttga 25644571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 4674702 - 4674937
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat-agtt 111  Q
    |||||||||||| | ||| ||||||||| |||||||||||||| || || |||||| |||||||||||| |||||| |||||||| ||| ||||  ||||    
T  4674702 ttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 4674801  T
Q  112 taagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaat 211  Q
    || ||||||||||||| ||  || |||| |||||| ||| |||||||||||||||||||| || || |||||| ||||||||||||||| ||||||||||    
T  4674802 ta-gaatgaatttttgtgaactgaaccttaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaat 4674900  T
Q  212 gcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||| ||||| ||||||||| ||||||||||||||    
T  4674901 gcgatccttgtcgcacgagttgttgtgagttgatctt 4674937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 29808514 - 29808761
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||| ||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  29808514 agatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacc 29808613  T
Q  102 -gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     || || | ||| ||||||||  ||||||| |   ||||||||||||||| ||||| |||||||||||||| || |||      ||||||||||||||||    
T  29808614 tggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttg 29808713  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  29808714 tttaggtt-aatgcgatctttgtcgcacgagttgatgtgagttgatctt 29808761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 13 - 248
Target Start/End: Original strand, 4185465 - 4185700
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat-agtt 111  Q
    |||||||||||| | ||| ||||||||| |||||||||| ||| || || |||||| ||||| |||||| |||||| |||||||||||| ||||  ||||    
T  4185465 ttttgacttttgagatgacccttagatgcttttgagtgcatgaacaagtctaataacgattatgaaagaatgtagagtgagattgaacctggaaagagtt 4185564  T
Q  112 taagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaat 211  Q
    || ||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||| || || |||||| ||| ||||||||||| ||||||||||    
T  4185565 ta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttatagaatgccttgctaggttaaat 4185663  T
Q  212 gcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||| ||| | ||||||||| ||||||||||||||    
T  4185664 gcgatccttgccgcacgagttgttgtgagttgatctt 4185700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 13 - 245
Target Start/End: Complemental strand, 4189435 - 4189203
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat-agtt 111  Q
    |||| ||||||| | ||| ||||||||| |||||||||||||| || || |||||| |||||||||||| |||||| |||||||| ||| ||||  ||||    
T  4189435 tttttacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 4189336  T
Q  112 taagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaat 211  Q
    || ||||||||||||| ||  || |||| |||||| ||| |||||||||||||||||||| || || |||||| ||||||||||||||| ||||||||||    
T  4189335 ta-gaatgaatttttgtgaactgaacctaaactcgtcatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaat 4189237  T
Q  212 gcgatctttgtcacacgagttgatgtgagttgat 245  Q
    |||||| ||||| ||||||||| |||||||||||    
T  4189236 gcgatcgttgtcgcacgagttgttgtgagttgat 4189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 28496104 - 28496350
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||| ||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  28496104 agatttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacc 28496203  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | |||||| || ||||| || |   ||||||||||||||| ||||| |||||||||||||| || |||      ||||||||||||||||    
T  28496204 tggaa-agacttagaatgaaacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttg 28496302  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  28496303 tttaggtt-aatgcgatctttgtcgcacgagttgatgtgagttgatctt 28496350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 4 - 202
Target Start/End: Complemental strand, 18457202 - 18457006
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||| ||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  18457202 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 18457103  T
Q  104 gaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    || ||  ||||||||||| ||||||| || || ||||||||| ||||| |||||||||||||||||||| || |||| |||| |||||||| ||||||||    
T  18457102 gatta-attaagaatgaactttttggaagctg-acctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaa-gccttgtt 18457006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 19303172 - 19303375
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  19303172 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 19303271  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| || || |||||| || |||||| | |   ||||||||||||||  ||||| |||||||||||||| |  ||| ||||||  ||||| |||||||    
T  19303272 -tgaaaagatttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttg 19303370  T
Q  201 ttagg 205  Q
    |||||    
T  19303371 ttagg 19303375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 25956253 - 25956421
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||||||||||||||||  |||||  ||||||| ||||||||||||||| ||||| |||| | |||| | ||||||| |||| ||||||| ||||     
T  25956253 gatttcgtaattttgacttttaagttgaatcttagatatttttgagtgcctgaacatgtctaattacgattggaaaagattctagattgagatttaacct 25956352  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||| |||||| |||||| |||||| | ||||||| ||||||||||||||||||||    
T  25956353 ggaatagtttaagaatggattttttggagttacacctgtattcgccatggcgagtagaggctctcgcct 25956421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 22080368 - 22080615
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||| ||| |  |||  ||||| ||||||||||||||||||| |||| ||||| ||||||||||||| |||||||  ||| | ||||||||||    
T  22080368 agatttcgtaactttaaacttttagttgaaccttagatgtttttgagtgactgaacatgtctaataatgattagaaaagattagagattaagattgaacc 22080467  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg- 200  Q
     ||||||||||||||| ||| || ||||||||  ||||||||||||||| |||||||||||||||||||| || || |      | ||||||  |||||     
T  22080468 tggaatagtttaagaacgaacttatgggagttatacctgaactcgccatggcgagtagaggctctcgcctcgcgagcttgtgtctgacagaacaccttgt 22080567  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||   ||||||||| ||||| ||||||||||||||||||||||||    
T  22080568 ttaggaataatgcgatccttgtcgcacgagttgatgtgagttgatctt 22080615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 205
Target Start/End: Original strand, 18409459 - 18409661
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||| |||||||| |||| ||||||||||||||| |||||||||||| | ||||| || |||||||||||||||| |||||||||||||||||||     
T  18409459 gatttcgtgattttgacctttgagttgatccttagatgcttttgagtgccttaacatgtctattaatgattaggaaagaatgtagaatgagattgaacct 18409558  T
Q  103 ggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
    |||| || || |||||| || |||| | | |   ||||||||||||||  ||||| ||||||||||||||  ||||| ||||||  ||||| ||||||||    
T  18409559 ggaa-agatttagaatgaaactttttgaattctgacctgaactcgccacggcgagcagaggctctcgcctctctagtgacccagaaacagagtgccttgt 18409657  T
Q  202 tagg 205  Q
    ||||    
T  18409658 tagg 18409661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 205
Target Start/End: Complemental strand, 29061025 - 29060827
Alignment:
Q  7 tcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaa 106  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||||||| |||||  ||||||||||||||| || ||||| ||||||||||||| ||||    
T  29061025 tcgtgatttcgacttttgagttgatccttagatgcttttgagtgcctgaacatgtccaataatgattaggaaggaatgtaggatgagattgaacctggaa 29060926  T
Q  107 tagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttagg 205  Q
       ||  |||||||| |||||| | |   ||||||||||||||   ||||||||||||||||||| || ||| ||||||  ||||| ||||||||||||    
T  29060925 agattgtagaatgaacttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 29060827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 20637925 - 20638030
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  20637925 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 20638024  T
Q  102 gggaat 107  Q
     |||||    
T  20638025 tggaat 20638030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 22779858 - 22779962
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22779858 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22779957  T
Q  102 gggaa 106  Q
     ||||    
T  22779958 tggaa 22779962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 20360602 - 20360707
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||  |||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  20360602 agatttcgtgtttttgacttttcagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 20360701  T
Q  102 gggaat 107  Q
     |||||    
T  20360702 tggaat 20360707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 1561793 - 1561689
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||||||||||  ||||||||||||||||||    
T  1561793 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaaagtagaatgagattgaacc 1561694  T
Q  102 gggaa 106  Q
     ||||    
T  1561693 tggaa 1561689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 19668728 - 19668617
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| || || |  ||| ||||||||  ||||||||||||||||| || ||||||| ||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgagctgtccaattacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatg 19668629  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  19668628 tgagttgatctt 19668617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 18821463 - 18821566
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||| ||||||||||||| |    
T  18821463 atttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacctg 18821562  T
Q  104 gaat 107  Q
    ||||    
T  18821563 gaat 18821566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 20594263 - 20594060
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||| ||||||| |||||||||||||||||||||||||||| | ||||| |||  ||||||||| |||| ||||| |||||||||||||    
T  20594263 agatttcgtgatttttacttttgagttgatccttagatgtttttgagtgcctaaacatgtctaaatatgattagggaagaatgtaggatgagattgaacc 20594164  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  ||||| || |||||| | |   |||||||||||| |  ||||| |||||||||||||| || ||| ||| ||  ||||| ||||||||    
T  20594163 tggaaagattgtagaataaacttttggaaatctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgt 20594064  T
Q  202 tagg 205  Q
    ||||    
T  20594063 tagg 20594060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 245
Target Start/End: Original strand, 31155040 - 31155272
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagttt 112  Q
    |||||||||||| | ||| ||||||||| ||||||||||||||  | || |||||| |||| ||||||| ||||||||||||||||||| |||| || |     
T  31155040 ttttgacttttgagatgacccttagatgcttttgagtgcctgaataagtctaataacgattgggaaagaatgtagaatgagattgaacctggaa-agatc 31155138  T
Q  113 a-agaatgaatt-tttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaa 210  Q
    | | || |||||  ||||||  || ||||| |||| |||| ||||| |||||||||||||| || || |||||  |||||  ||||||||||||||||||    
T  31155139 agaaaacgaattccttggga-atgaacctgtactctccatggcgagcagaggctctcgcctcgcgagctacccctttacaacatgccttgttaggttaaa 31155237  T
Q  211 tgcgatctttgtcacacgagttgatgtgagttgat 245  Q
    |||| || ||||| ||||||||| |||||| ||||    
T  31155238 tgcggtccttgtcgcacgagttgttgtgagatgat 31155272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 17287427 - 17287531
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||| ||||| |||    
T  17287427 agatttcgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgtgattgtacc 17287526  T
Q  102 gggaa 106  Q
     ||||    
T  17287527 tggaa 17287531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 25628986 - 25629189
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||  ||||| ||||||||||| || || |||| | ||| | || |||||||||||||| |||||||||||||||||||||    
T  25628986 agatttcatgattttgactttttagttgaaccttagatgttgttaagcgcctaaacatctctattaatgattaggaaatattgtagaatgagattgaacc 25629085  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||| ||||| || ||||| || |   ||||| ||||||| | ||||| |||||||||||||| || ||| ||||||  ||||| ||||||||    
T  25629086 tggaaatattttagaataaacttttgtgattatgacctgtactcgccgtggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 25629185  T
Q  202 tagg 205  Q
    ||||    
T  25629186 tagg 25629189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 16920275 - 16920380
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| ||||||||||||||  |||| ||||||||||||| ||||| ||||| || |||||| |||    
T  16920275 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattagaaaagaatgtaggataagattgtacc 16920374  T
Q  102 gggaat 107  Q
     |||||    
T  16920375 tggaat 16920380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 98
Target Start/End: Complemental strand, 21939873 - 21939777
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattga 98  Q
    ||||||||| ||||||||||||| ||||| |||||||||   |||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||||||    
T  21939873 agatttcgtgattttgacttttgagttgaaccttagatgcccttgagtgcctgaacatgtgtaatattgattaggaaagaatgtaggatgagattga 21939777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 25611354 - 25611458
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| |||||||||  ||||||||||||| ||||| |||||||||||||||  || || || ||||||||| |||    
T  25611354 agatttcgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggagtgaatgcagcatgagattggacc 25611453  T
Q  102 gggaa 106  Q
     ||||    
T  25611454 tggaa 25611458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 1561609 - 1561548
Alignment:
Q  186 ttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  1561609 ttacataatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatc 1561548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 15894061 - 15894165
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| |||||||||  || ||||  ||||||||| |||    
T  15894061 agatttcgtacttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacc 15894160  T
Q  102 gggaa 106  Q
     ||||    
T  15894161 tggaa 15894165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 22334513 - 22334617
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||| ||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| |||||||||  || ||||  ||||||||| |||    
T  22334513 agatttcgtaaatttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagtgaatgtaagatgagattggacc 22334612  T
Q  102 gggaa 106  Q
     ||||    
T  22334613 tggaa 22334617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 22439289 - 22439227
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtata 64  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||||  |||||||    
T  22439289 agattttgtaattttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtata 22439227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 19863467 - 19863414
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  19863467 agatttcgtagttttgacttttgagttgaaccttagatgtttttgagtgcctga 19863414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 22831981 - 22831876
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||  ||| ||||| ||||| |||||||  |||| | ||| | |||||||||||    
T  22831981 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgtttgaacatgtctaatattgattagtgaagaatataggacgagattgaacc 22831882  T
Q  102 gggaat 107  Q
     |||||    
T  22831881 tggaat 22831876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 9098290 - 9098401
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||||||||||||||||||||  | || |    ||  ||||||  |||||||||||| | ||  | ||||||| ||||||||||||    
T  9098290 cctgaactcgccatagcgagtagaggctctcgcctcacgagctcatgagagacagaacaccttgttaggtttattgtcacctttgtcgcacgagttgatg 9098389  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  9098390 tgagttgatctt 9098401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 20109673 - 20109606
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| || ||||||||||| |||||||||||||||||||| ||| || |||| ||||||||||||    
T  20109673 ttagatgattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacc 20109606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 35008684 - 35008618
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| ||| || |||| |||||||||||    
T  35008684 ttagatgtttttaagtgcctgaacatgtataagaatgattaggcaagtttttagactgagattgaac 35008618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 11185981 - 11185876
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||  ||||| ||||| ||||| |||||||||  ||||||||||||| |||||  |||| |||||||  |||| ||||| | |||||||||||    
T  11185981 agatttcgtatatttgatttttgagttgaaccttagatgcctttgagtgcctgaacatgtcgaatattgattagtgaagagtgtaggacgagattgaacc 11185882  T
Q  102 gggaat 107  Q
     |||||    
T  11185881 tggaat 11185876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 18180974 - 18180925
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||||||||||    
T  18180974 atttcgtgattttgacttttgagttgaaccttagatgtttttgagtgcct 18180925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 19668908 - 19668812
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgg 128  Q
    |||||||||||| |||||| |||| ||||||| |||||||||||  ||| || || | |||||||||||| ||   ||||||| |||||||||||||    
T  19668908 ccttagatgtttctgagtgtctgaacatgtatcataatgattagacaagtttttatattgagattgaacctggggaagtttaaaaatgaatttttgg 19668812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 22432739 - 22432667
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||| ||| |||||||||||| ||||| |||||||||||||||||||| |||  ||||||| ||| |||||    
T  22432739 agattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcatgaagatgtatattaaagatta 22432667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Original strand, 25641815 - 25641887
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||| ||| ||| |||||||| ||||| ||||||||||||||||||||||||  ||||||| ||| |||||    
T  25641815 agattttgtagtttggacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 25641887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 20109496 - 20109386
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||||||||||||||||||||  | || |    ||  ||||||  |||||||| ||| | || || ||||||| ||||||||||||    
T  20109496 cctgaactcgccatagcgagtagaggctctcgcctcacgagctcatgagagacagaa-cccttgttaagtttattgtgacctttgtcgcacgagttgatg 20109398  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  20109397 tgagttgatctt 20109386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 174
Target Start/End: Complemental strand, 23077085 - 23077050
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgc 174  Q
    ||||||||||||||||||||||||||||||||||||    
T  23077085 tgaactcgccatagcgagtagaggctctcgccttgc 23077050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 35008503 - 35008397
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    ||||||||||||||||||||||||||||||||| || || |     |  ||||| || ||||||||| |||||| || ||||||  ||||||||||||||    
T  35008503 tgaactcgccatagcgagtagaggctctcgcctcgcgagctgttgtgagacagactg-cttgttaggataaatgtgacctttgttgcacgagttgatgtg 35008405  T
Q  239 agttgatc 246  Q
    ||||||||    
T  35008404 agttgatc 35008397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 17106246 - 17106180
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| |||||||||||    
T  17106246 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagactgagattgaac 17106180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 20224478 - 20224412
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| |||| |||| |||||||||| ||| || |||| |||||||||||    
T  20224478 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 20224412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 22118462 - 22118396
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||| |||| |||| |||||||||| ||| || |||| |||||||||||    
T  22118462 ttagatgattttgagtgcctgaacatgcataagaatgattaggcaagtttttagattgagattgaac 22118396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 96
Target Start/End: Complemental strand, 33443579 - 33443517
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagatt 96  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||| |||||| |||| |||||||    
T  33443579 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagattttagattgagatt 33443517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Original strand, 16920399 - 16920448
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccag 185  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||| ||||||    
T  16920399 acctgaactcgccatggcgagcagaggctctcgccttgcgagtgacccag 16920448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 19023907 - 19023814
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttg 127  Q
    ||||||| ||| | ||||||||  ||||||||||||||||||| ||| || |||| |||||||||||| |  | ||||||| |||| |||||||    
T  19023907 ttagatgatttcgggtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttg 19023814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 15041184 - 15041248
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataa 68  Q
    |||| |||||||||||||||| |||   ||||||||||||||||||||||||  |||| ||||||    
T  15041184 attttgtaattttgacttttgagttataccttagatgtttttgagtgcctgaagatgtttaataa 15041248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21739665 - 21739705
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  21739665 ttttgacttttgagttgaaccttagatgtttttgagtgcct 21739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 174
Target Start/End: Original strand, 9622186 - 9622221
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgc 174  Q
    ||||||||||||||||||||||||| ||||||||||    
T  9622186 tgaactcgccatagcgagtagaggcgctcgccttgc 9622221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 100
Target Start/End: Complemental strand, 18697014 - 18696955
Alignment:
Q  41 tttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||  ||||||||||||||||||| ||| || |||| |||||| ||||    
T  18697014 tttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagatggaac 18696955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 20360726 - 20360797
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggtt 207  Q
    ||||||||||||||| |||||  ||||||||||||| || ||| ||||||  ||||| || |||||||||||    
T  20360726 acctgaactcgccatggcgagctgaggctctcgcctcgcgagtgacccagaaacagagtgacttgttaggtt 20360797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 25603016 - 25603091
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattagga 77  Q
    ||||||||| ||||| ||||||| ||||| ||| | | |  ||||||||||||| ||||| |||||||||||||||    
T  25603016 agatttcgtgattttaacttttgagttgaacctgaaacgcctttgagtgcctgaacatgtctaataatgattagga 25603091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 27415585 - 27415632
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    ||||||||| ||||||||||||| ||||| |||||||||| |||||||    
T  27415585 agatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 27415632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 97
Target Start/End: Original strand, 31164489 - 31164584
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattg 97  Q
    |||||| | ||||||||| |||| |||||| ||| |||||  |||||||||||| |||   || ||||||||||||| || ||||| |||||||||    
T  31164489 agattttgcaattttgacatttgagttgatacttggatgtccttgagtgcctgaacatacctagtaatgattaggaatgaatgtaggatgagattg 31164584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 128
Target Start/End: Original strand, 9098112 - 9098206
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgg 128  Q
    ||||||| || ||||||||||| ||  |||||||||||||||  ||| || |||| ||| |||||||| || | ||||||| |||| ||||||||    
T  9098112 ttagatgattctgagtgcctgaacagatataataatgattagacaagtttctagattgatattgaacctgggaaagtttaaaaatggatttttgg 9098206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 23539452 - 23539386
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||| ||||| ||| || |||| |||||||||||    
T  23539452 ttagatggttttgagtgcctgaatatgtataagaatggttaggcaagtttttagactgagattgaac 23539386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 16523042 - 16523086
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||| ||||    
T  16523042 gtaattttgacttttgagttgaaccttagatgcttttgagcgcct 16523086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 18821585 - 18821653
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||| ||||| |||||||||||||| || ||  ||||||  ||||| || ||||||||    
T  18821585 acctgaactcgccatggcgagcagaggctctcgcctcgcgagcgacccagaaacagagtgacttgttag 18821653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 19362958 - 19362863
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac-cgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||||||||||||  ||  |||||| |||||||||||  ||| || |||| ||||||||||| || ||| ||||||| |||| |||||||||    
T  19362958 ttagatgtttttgagtgctggaatatgtattataatgattagacaagtttttagattgagattgaacacgagaa-agtttaaaaatggatttttggg 19362863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21834533 - 21834573
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  21834533 ttttgacttttgagttgaaccttagatgcttttgagtgcct 21834573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 136; Significance: 5e-71; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 19756 - 19509
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| ||||||||||||| || |||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||| ||||||||||||||||    
T  19756 agattttgtaattttgacttctgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaggattggagaatgagattgaacc 19657  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg- 200  Q
     ||||   ||| |||||||||||||  | |||||||||||||||||||| ||||| |||||||||||||| || | | |||||||||||||||| ||||     
T  19656 tggaaagattttagaatgaatttttatgtgttgcacctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaatgtcttgc 19557  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||| ||||||||||||| ||||| ||| ||||||||||||||||||||    
T  19556 ttatgttaaatgcgatccttgtcgcacaagttgatgtgagttgatctt 19509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 48091 - 48164
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    ||||||| || ||||||||||||| | ||| ||||||||||||||||||| ||||  ||||||| ||| |||||    
T  48091 cagattttgtgattttgacttttgagatgaaccttagatgtttttgagtgtctgaagatgtatattaaagatta 48164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 79)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 38854883 - 38855128
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | ||||| ||||     
T  38854883 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattaagatttaacct 38854982  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    ||||||||||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||| ||||||| || | || |||||||||||||||||||| |    
T  38854983 ggaatagtttaagaacgaa-ttttgagagttacacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaatgccttgct 38855081  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||  ||||||||||| ||||||||||||||| ||||||||    
T  38855082 taggttaaacacgatctttgtcgcacgagttgatgtgaattgatctt 38855128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 21674196 - 21673951
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||| || |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  21674196 cagatttcgtaattttgacttttgagttgatccttggacgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 21674097  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||   ||| ||||||||| |||| |||||||||||||||||||||| |||||||||||| ||||||| || | ||  |  ||||||||||||||||    
T  21674096 ctggaaagattttagaatgaatatttgtgagttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgacttgttacagaatgccttg 21673997  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgat 245  Q
     ||||| ||||||||||||||||| ||| |||| ||||||||||||    
T  21673996 tttaggataaatgcgatctttgtcgcacaagttaatgtgagttgat 21673951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 26355328 - 26355576
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||| |||||| ||| |||||||||||    
T  26355328 cagatttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggagagattgaagattgagattgaac 26355427  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||    || |||||||||||||| || ||| ||||||||| ||||| ||||||||||||||||||||  | || || | |||||||||||||||||    
T  26355428 ctggaaagactttagaatgaatttttgtgaattgtacctgaacttgccatggcgagtagaggctctcgcctcacgagctaactagttacagaatgccttg 26355527  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     ||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  26355528 tttatgttaaatgcgatctttgtcgcacaagttgatgtgagttgatctt 26355576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 228
Target Start/End: Complemental strand, 39834321 - 39834095
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||| ||| ||||||| |||  || || |||||||||||||||||||||| | | ||||| |||||||||||||||||||||||| ||||||||||||     
T  39834321 gattttgtagttttgacctttaagtcgaaccttagatgtttttgagtgcctaaacttgtatgataatgattaggaaagattgtagattgagattgaacct 39834222  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||| || || |||||| ||||||||| ||||| |    
T  39834221 ggaatagtttaagaatgaatctttgtgagttgcacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaataccttgtt 39834122  T
Q  202 taggttaaatgcgatctttgtcacacg 228  Q
    || ||||||||||||||||||| ||||    
T  39834121 taagttaaatgcgatctttgtcccacg 39834095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 3 - 248
Target Start/End: Complemental strand, 6520857 - 6520612
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||  ||||| ||||||||||||||||||| |||| ||||| ||||||| |||||||||||||| ||| | ||| ||||||     
T  6520857 gatttcgtaattttgacctttaagttgaaccttagatgtttttgagtgtctgaacatgtctaataataattaggaaagattggagattaagactgaacct 6520758  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    | ||||||||||||||| ||||||| |||||  ||||||| ||||||| |||||||||||| ||||||| || |  | |||| ||||||||||| |||||    
T  6520757 gaaatagtttaagaatggatttttgagagttagacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaatgctttgtt 6520658  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||||||||  || |||||||||||||||||||||    
T  6520657 aggttaaatgcgatctttgttgcatgagttgatgtgagttgatctt 6520612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 8 - 248
Target Start/End: Original strand, 23760477 - 23760717
Alignment:
Q  8 cgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    ||||||||||||||||| |||||||| |  |||||||||||| ||||| ||||| ||||||||||||||||| |||| | | |||||||||||| |||||    
T  23760477 cgtaattttgacttttgagttgatccctgaatgtttttgagttcctgaacatgtctaataatgattaggaaatattggatattgagattgaacctggaat 23760576  T
Q  108 agtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggtt 207  Q
    |||||||||| ||| || ||||||||  ||||||||| ||||  |||||||||||| ||||||| || | ||  | ||||||| |||||||||||||| |    
T  23760577 agtttaagaacgaacttgtgggagttatacctgaacttgccaaggcgagtagaggccctcgcctcgcgaattgactagttacaaaatgccttgttaggat 23760676  T
Q  208 aaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||| ||| ||||||||||||||||||||    
T  23760677 aaatgcgatctttgtcgcacaagttgatgtgagttgatctt 23760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 103 - 248
Target Start/End: Complemental strand, 21285987 - 21285842
Alignment:
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||| ||||||| || |||| |||||||||||||||| |||||    
T  21285987 ggaatagtttaagaatgaatttttgggagttacacctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaatgctttgtt 21285888  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||| || ||||||||||||||||||||||||    
T  21285887 aggttaaatgcgatctttatcgcacgagttgatgtgagttgatctt 21285842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 19801058 - 19801227
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||||||||||||  | ||||||||||| ||||| ||||||||||||||||||| |  ||||| ||||||||||    
T  19801058 agatttcgtgattttgacttttgagttgatccttagatgcatatgagtgcctgaacatgtctaataatgattaggaaagactagagaataagattgaacc 19801157  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
     ||||||||||||||| ||| || ||||||||  ||||||||||||||| |||||||||||  |||||||    
T  19801158 tggaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagtagaggtcctcgcct 19801227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 41598673 - 41598480
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||| ||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||||||| |||||| |||||||||||||||||||     
T  41598673 gattccgtgattttgacttttgagttgacccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtagaatgagattgaacct 41598574  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    ||||   ||| ||||||||  ||||||| |   ||||||||||||||| ||||| |||||||||||||| || ||| ||| |||||||||||||    
T  41598573 ggaaagattttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaatgc 41598480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 23406871 - 23406665
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||| |||    
T  23406871 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattggacc 23406772  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||  |||||||||||||||||||| || ||| ||||||  ||||| |||||||    
T  23406771 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 23406672  T
Q  201 ttaggtt 207  Q
    |||||||    
T  23406671 ttaggtt 23406665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 5865908 - 5866153
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  5865908 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 5866007  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | |||||| || ||| | || |   ||| ||||||||||| ||||| |||||||||||||| || ||       |||||||||||||||     
T  5866008 -tgaaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaatgccttt 5866105  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| |||||||||||||||   ||||||||||||||||||||||    
T  5866106 ttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatctt 5866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 6759747 - 6759543
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| ||||||||||||||||||     
T  6759747 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcttgaacatgtctaataatgattaggaaagaatgtagaatgagattgaact 6759648  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||| |||||| || |||||| | |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||    
T  6759647 tggaaatattttagaatgaaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 6759548  T
Q  201 ttagg 205  Q
    |||||    
T  6759547 ttagg 6759543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 18878868 - 18879071
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  18878868 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 18878967  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||   |||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  18878968 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccaagacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttg 18879067  T
Q  201 ttag 204  Q
    ||||    
T  18879068 ttag 18879071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 17141403 - 17141158
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| ||| |||| ||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  17141403 agattttgtattttttacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 17141304  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | |||||| || ||| | || |   ||| ||||||||||| ||||| |||||||||||||| || ||       ||||||||| |||||     
T  17141303 -tgaaaagacttagaatgaaaatttagagaatcagacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacagaacgccttt 17141206  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| ||||||||||||||||  ||||||||||||||||||||||    
T  17141205 ttaggttgaatgcgatctttgtcattcgagttgatgtgagttgatctt 17141158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 28648675 - 28648878
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||| |||||| ||||| ||||||||||||     
T  28648675 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgaaca 28648774  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| ||  ||| | | ||  ||||||||||||||  ||||| |||||||||||||||||   | ||||||  ||||| |||||||    
T  28648775 tggaa-agatttagaatgaaaccttttgaattttgacctgaactcgccacggcgagcagaggctctcgccttgcgcatgacccagaaacagagtgccttg 28648873  T
Q  201 ttagg 205  Q
    |||||    
T  28648874 ttagg 28648878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 16091972 - 16092175
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| |||||||||||||| ||||    
T  16091972 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtagaatgagattaaacc 16092071  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     | ||   ||||| ||  || |||||| | |   ||||||||||||||  ||||| ||||||||||||||  | ||| ||||||  ||||| |||| |||    
T  16092072 tgaaaagatttaaaaaaaaacttttggaattctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgt 16092171  T
Q  202 tagg 205  Q
    ||||    
T  16092172 tagg 16092175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 18818041 - 18818281
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||| | ||||| |||||||||||||    
T  18818041 agatttcatgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacc 18818140  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  | ||||||  ||| ||  |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || |||||    
T  18818141 tggaaagattgtaaaatgaaacttttggtttctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgt 18818240  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||   ||||| ||||||  ||||||||| || |||||||    
T  18818241 taggtt--ttgcgacctttgttgcacgagttgttgagagttga 18818281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 22627225 - 22627126
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22627225 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22627126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 22875555 - 22875352
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| |||||||| |||| ||| ||||||||||| ||||||| | || | ||||| ||||||||||||||||||||||||||| ||| |||||||    
T  22875555 agatttcgtgattttgacctttgagttaatccttagatgcttttgagcgtctaaacatgtttaataatgattaggaaagattgtagaacgaggttgaacc 22875456  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||| ||||||||  ||||||| |   |||||||||||||||  |||| |||||||||||||| || ||| ||||||  ||||| || |||||    
T  22875455 tggaaagattttagaatgaaactttgggaatctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgt 22875356  T
Q  202 tagg 205  Q
    ||||    
T  22875355 tagg 22875352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 4 - 106
Target Start/End: Complemental strand, 7373237 - 7373135
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||| |||||||| |    
T  7373237 atttcgtaattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgaaattgaacctg 7373138  T
Q  104 gaa 106  Q
    |||    
T  7373137 gaa 7373135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 21923559 - 21923765
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| ||| ||||| |||||||||||||    
T  21923559 agattttgtgattttgacttttgagttgatccttagatgcttttgagtgtctgaacatgtctaataatgattaggacagaatgtaggatgagattgaacc 21923658  T
Q  102 gggaatagtttaagaatgaa--tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
      ||| || || ||||||||  |||||||    ||  |||||||||||||  | ||| |||||||||||||| || ||| ||||||  ||||| ||||||    
T  21923659 -tgaaaagatttagaatgaaactttttggattctgaccctgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccagaaacagagtgcctt 21923757  T
Q  200 gttaggtt 207  Q
    ||||||||    
T  21923758 gttaggtt 21923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 21491482 - 21491383
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||  ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  21491482 agattttgtaattttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 21491383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 20536698 - 20536492
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||| | ||||| ||||||||| |||||||||||||| ||||| | ||||||||||||||||| ||||| |||||||||||||    
T  20536698 agattttgtgattttgactttcgagttgaaccttagatgcttttgagtgcctgaacatgtctgataatgattaggaaagaatgtaggatgagattgaacc 20536599  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||  |||||||||||||||||||| || ||| ||||||  ||||| || |||     
T  20536598 tggaaagattgtagaatgaaacttatgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgactta 20536499  T
Q  201 ttaggtt 207  Q
    |||||||    
T  20536498 ttaggtt 20536492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 45130662 - 45130767
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| ||||||||||||  |||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  45130662 agatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 45130761  T
Q  102 gggaat 107  Q
     |||||    
T  45130762 tggaat 45130767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 21249871 - 21249626
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||| | |||||||||||| ||||| ||||||||| |||||||||||  | ||||| ||||||||||||||||||| ||||| |||||| ||||||    
T  21249871 agatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagactgaacc 21249772  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  |  |||||||  ||||| || |   ||| ||||||||||| ||||| |||||||||||||| || ||       |||||||||||||||     
T  21249771 tggaa-agacttggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcatttgtgttacagaatgccttt 21249674  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||||   | |||||||||||||| |||||    
T  21249673 ttaggttaaatgcgatctttgtcgttcaagttgatgtgagtttatctt 21249626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 21255709 - 21255464
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||| | |||||||||||| ||||| ||||||||| |||||||||||  | ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  21255709 agatttcgcatttttgacttttgagttgaaccttagatgcttttgagtgcccaaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 21255610  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  |  |||||||  ||||| || |   ||| ||||||||||| ||||| || ||||||||||| || ||        ||||||||||||||     
T  21255609 tggaa-agacttggaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagcggctctcgcctcgcgagcatttgtattacagaatgccttt 21255512  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||    
T  21255511 ttaggttaaatgcgatctttgtcgttcgagttgatgtgagtttatctt 21255464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 21918641 - 21918745
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||| ||||| ||||||||||||| ||||| ||||| | |||||||||||    
T  21918641 agatttcgtaattttgacttttgagttgaaccttagatgctttggagtgcctgaacatgtctaataatgattagaaaagaatgtaggaagagattgaacc 21918740  T
Q  102 gggaa 106  Q
     ||||    
T  21918741 tggaa 21918745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 31971734 - 31971629
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||  |||||||||||| ||||| ||||||||| ||||| |||||||| ||||| ||||||||||||||||||  ||||| |||||||||||||    
T  31971734 agatttcgtgtttttgacttttgagttgaaccttagatgcttttgtgtgcctgaacatgtctaataatgattaggaaaggatgtaggatgagattgaacc 31971635  T
Q  102 gggaat 107  Q
     |||||    
T  31971634 tggaat 31971629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 13 - 97
Target Start/End: Complemental strand, 23649032 - 23648948
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattg 97  Q
    |||||||||||| ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||||| |||||||||    
T  23649032 ttttgacttttgagttgatccttagatgcttttgagtgactgaacatgtctaataatgattaggaaagaatgtaggatgagattg 23648948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 16199289 - 16199388
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| |||| |||| |||||||||||| | ||||| | ||||||||||||||||| ||||| |||||||||||||    
T  16199289 agatttcgtatttttgacttttgagttgaaccttggatgcttttgagtgccttaacatgtcttataatgattaggaaagaatgtaggatgagattgaacc 16199388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 21414858 - 21414956
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||| |||||| ||||||  || || ||||||||||||||||||||||||  ||| | | |||||||||||||||||||||||||||||||||||    
T  21414858 agatttcggaatttttactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 21414956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Original strand, 25362793 - 25362887
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    |||||||||||| ||||| |||||||||  |||||||| |||| ||||  ||||||||||||||||||| ||||| ||||||||||||| |||||    
T  25362793 ttttgacttttgagttgaaccttagatgcctttgagtgactgaacatgactaataatgattaggaaagaatgtaggatgagattgaacctggaat 25362887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 128
Target Start/End: Complemental strand, 20499149 - 20499024
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||| ||| |||||||  ||| ||||| | ||||||| |||||||||||||| |||||||||||||||||||| ||| || |||| ||||||||||||     
T  20499149 gattttgtagttttgacccttgagttgaactttagatgattttgagtgcctgaacatgtataataatgattaggtaagtttttagattgagattgaacct 20499050  T
Q  103 ggaatagtttaagaatgaatttttgg 128  Q
    |  | ||||||| |||| ||||||||    
T  20499049 gagaaagtttaaaaatggatttttgg 20499024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 20498915 - 20498808
Alignment:
Q  141 aactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgag 240  Q
    ||||||||||||||||||||||||||||||| || || |    ||  ||||||  |||||||||||| | || || ||||||||||||||||||||||||    
T  20498915 aactcgccatagcgagtagaggctctcgcctcgcgagctcatgagagacagaacaccttgttaggtttattgtgacctttgtcacacgagttgatgtgag 20498816  T
Q  241 ttgatctt 248  Q
    ||||||||    
T  20498815 ttgatctt 20498808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 17266579 - 17266646
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||| || |||| ||||||||||||    
T  17266579 ttagatgtttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacc 17266646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 13507664 - 13507765
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||  ||| || |||| ||||| |||||| || | ||||||| |||| |||||    
T  13507664 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaatggatttt 13507763  T
Q  126 tg 127  Q
    ||    
T  13507764 tg 13507765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 13597196 - 13597297
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||  ||| || |||| ||||| |||||| || | ||||||| |||| |||||    
T  13597196 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagactgaacctgggaaagtttaaaaatggatttt 13597295  T
Q  126 tg 127  Q
    ||    
T  13597296 tg 13597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 982989 - 983084
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| ||||||||| |||| |||||||| || |||||||||||| || |||| |||||||||||| |  | ||||||| |||| |||||||||    
T  982989 ttagatgattttgagtgtctgaacatgtatattagtgattaggaaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 983084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 17439092 - 17439187
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||| ||| || |||| || ||||||||| || | ||||||| |||| |||||||||    
T  17439092 ttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgggattgaacctgggaaagtttaaaaatggatttttggg 17439187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 129
Target Start/End: Complemental strand, 24353550 - 24353463
Alignment:
Q  42 ttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||  |||| |||||||||    
T  24353550 ttttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttataaatggatttttggg 24353463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 37116882 - 37116815
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| ||||||||||||    
T  37116882 ttagatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagattgaacc 37116815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 22364959 - 22364909
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  22364959 ccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagttgatc 22364909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 24353329 - 24353271
Alignment:
Q  188 acagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||| |||||||||| |||||| || ||||||| ||||||||||||||||||||||    
T  24353329 acagaataccttgttaggataaatgtgacctttgtcgcacgagttgatgtgagttgatc 24353271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16409889 - 16409938
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  16409889 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16409938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16860971 - 16861020
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  16860971 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 16861020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 246
Target Start/End: Original strand, 17266757 - 17266866
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||| ||||||||||||||||| || ||       |  ||||||  ||||||||||||||||| || |||| || ||||||||||||    
T  17266757 cctgaactcgccatagcaagtagaggctctcgcctcgcgagcccttgtgagacagaactccttgttaggttaaatgtgacctttatcgcacgagttgatg 17266856  T
Q  237 tgagttgatc 246  Q
    ||||||||||    
T  17266857 tgagttgatc 17266866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 21389084 - 21389137
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||| |||||||||||| ||||| ||||||||| ||||||||||||||    
T  21389084 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctga 21389137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 40492438 - 40492534
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatga-atttttggg 129  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| ||||||||||||  | | ||||||| ||||| |||||||||    
T  40492438 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaacctcggaaagtttaaaaatgagatttttggg 40492534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 21491300 - 21491237
Alignment:
Q  185 gttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||| ||||||| ||||||||||||||    |||||| |||||||||||||||    
T  21491300 gttacagaatgcctttttaggttgaatgcgatctttgtagttcgagttaatgtgagttgatctt 21491237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 16800024 - 16799958
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||||||||||||||  |||||||| |||||||||| | | || |||| |||||||||||    
T  16800024 ttagatgtttttgagtgcctgaatatgtataagaatgattaggcaggtttttagattgagattgaac 16799958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 22996379 - 22996313
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| |||||||||||    
T  22996379 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgagattgaac 22996313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 37116704 - 37116670
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcct 37116670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 16411903 - 16411952
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| |||||||||||||||| ||||| ||||| ||||||||||||||||    
T  16411903 attttgtaattttgacttttgagttgaaccttaaatgtttttgagtgcct 16411952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 19899571 - 19899510
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||||||| ||||| |||||||||||||||||||||| |  |||| || |||||||||    
T  19899571 ttttgacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19899510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 15602656 - 15602700
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  15602656 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15602700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 15611108 - 15611152
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  15611108 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 15611152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 30642934 - 30642974
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  30642934 ttttgacttttgagttgaaccttagatgtttttgagtgcct 30642974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 2418462 - 2418529
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| ||| ||||||||    
T  2418462 ttagatggttttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaacc 2418529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 983167 - 983201
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||| |||||||||||||||||||||||||    
T  983167 cctgaactcaccatagcgagtagaggctctcgcct 983201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 76
Target Start/End: Original strand, 17085770 - 17085804
Alignment:
Q  42 ttttgagtgcctgagcatgtataataatgattagg 76  Q
    |||||||||||||| ||||||||||||||||||||    
T  17085770 ttttgagtgcctgaacatgtataataatgattagg 17085804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 17353580 - 17353622
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||| ||||| |||||||||||||||||| |||||    
T  17353580 ttttgacttttgagttgaaccttagatgtttttgagtccctga 17353622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 19154472 - 19154538
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||| |||||  |||||| |||||||||||| ||| || |||| |||||||||||    
T  19154472 ttagatgattttgagttcctgaatatgtattataatgattagggaagtttttagactgagattgaac 19154538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 19976921 - 19976860
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||| ||||||| ||||| |||||||||||||||||||||| |  |||| || |||||||||    
T  19976921 tttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19976860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 19983569 - 19983508
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||| ||||||| ||||| |||||||||||||||||||||| |  |||| || |||||||||    
T  19983569 tttttacttttgagttgaaccttagatgtttttgagtgcctaaagatgtttattaatgatta 19983508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 20856059 - 20856108
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||| ||||||| ||||| ||||| ||||||||| ||||||||||||    
T  20856059 atttcgtgattttgaattttgagttgaaccttagatgcttttgagtgcct 20856108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 377754 - 377714
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  377754 ttttgacttttgagttgaaccttagatgcttttgagtgcct 377714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 16185204 - 16185164
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| || |||||||||||||||||||    
T  16185204 ttttgacttttgagttgaaccatagatgtttttgagtgcct 16185164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 20465682 - 20465722
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  20465682 ttttgacttttgagttgaaccttagatgcttttgagtgcct 20465722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21161758 - 21161798
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||| ||||||||||||||    
T  21161758 ttttgacttttgagttgaaccttagaagtttttgagtgcct 21161798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 21168364 - 21168404
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||| ||||||||||||||    
T  21168364 ttttgacttttgagttgaaccttagaagtttttgagtgcct 21168404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 21918766 - 21918834
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||| ||||| |||||||||||||| || ||| ||| ||  ||||| || ||||||||    
T  21918766 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgacttgttag 21918834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 21967336 - 21967368
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  21967336 tgaactcgccatagcgagtagaggcgctcgcct 21967368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 21980061 - 21980093
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  21980061 tgaactcgccatagcgagtagaggcgctcgcct 21980093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 21985044 - 21985076
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  21985044 tgaactcgccatagcgagtagaggcgctcgcct 21985076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 22000081 - 22000113
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  22000081 tgaactcgccatagcgagtagaggcgctcgcct 22000113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 23648905 - 23648802
Alignment:
Q  140 gaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtga 239  Q
    ||||||||||| ||||  |||||||||||||| |  ||| ||||||  ||||| || |||||||||||  |||||| ||||||  ||||||||| || ||    
T  23648905 gaactcgccatggcgatcagaggctctcgcctcgtgagtaacccagaaacagagtgacttgttaggtt-tatgcgacctttgttgcacgagttgttgaga 23648807  T
Q  240 gttga 244  Q
    |||||    
T  23648806 gttga 23648802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 24756197 - 24756157
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| ||||||| ||||| ||||||||||||||||||||||    
T  24756197 tttttacttttgagttgaaccttagatgtttttgagtgcct 24756157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 37116087 - 37116155
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatga-ttaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||  |||||||||||||| ||||| ||  || |||| ||||||||||||    
T  37116087 ttagatgattttgagtgcctgaatatgtataataatgatttaggcaaatttttagattgagattgaacc 37116155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 44493455 - 44493487
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  44493455 tgaactcgccatagcgagtagaggcgctcgcct 44493487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 3420 - 3195
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||| |    
T  3420 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 3321  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-tt 202  Q
    |||||||||||||| ||| || ||||||||  ||||||||||||||| |||||||||||| ||||||| |  | ||  | ||||||||||||||||| ||    
T  3320 gaatagtttaagaacgaacttgtgggagttatacctgaactcgccatggcgagtagaggccctcgcctcgtgaattgactagttacagaatgccttgttt 3221  T
Q  203 aggttaaatgcgatctttgtcacacg 228  Q
    ||||||||||||||||||||| ||||    
T  3220 aggttaaatgcgatctttgtcgcacg 3195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 45419 - 45668
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||  ||||||||||||||    
T  45419 cagattttgtaatttttacttttgagttgatccttagatgtttttgagtgcctgaatatgtctaataatgattaggaaagattggggaatgagattgaac 45518  T
Q  101 c-gggaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcct 198  Q
    | || || | ||| |||||||| |||||| || ||| ||||||||||||||| |||||||||||||||||||| || || || | |||||||||||| ||    
T  45519 ctggtaagacttt-agaatgaattttttgtgaattgtacctgaactcgccatggcgagtagaggctctcgcctcgcgagctaactagttacagaatgtct 45617  T
Q  199 tg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    || ||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  45618 tgtttaggataaatgcgatctttgtcgcacgagttgatgtgagttgatctt 45668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 127; Significance: 1e-65; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 248
Target Start/End: Complemental strand, 161173 - 160928
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||| |    
T  161173 atttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaacctg 161074  T
Q  104 ga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt-gt 201  Q
    || | | ||| |||||||||||||| ||  || ||||||| ||||||| |||||||||||||||| |||  | || || | |||||||||||| ||| ||    
T  161073 gagagacttt-agaatgaatttttgtgaactgaacctgaagtcgccatggcgagtagaggctctcacctcacgaggtaactagttacagaatgtcttggt 160975  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||    
T  160974 taggataaatgtgatctttgtcgcacgagttgatgtgagttgatctt 160928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 447007 - 446965
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattagg 76  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||    
T  447007 ttagatgattttgggtgcctgaacatgtataataatgattagg 446965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 497938 - 497896
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattagg 76  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||    
T  497938 ttagatgattttgtgtgcctgaacatgtataataatgattagg 497896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 162867 - 162899
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  162867 tgaactcgccatagcgagtagaggcgctcgcct 162899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 133144 - 132896
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  133144 cagatttcgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 133045  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||    || |||||||| ||||| ||  || ||||||||||||||| ||||| |||||||||||||| || |||       ||||| |||||||||    
T  133044 ctggaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtcttacataatgccttg 132945  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  132944 tttaggttaaatgtgatctttgtcgcacgagttgatgtgagttgatctt 132896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 5754 - 5999
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    |||||||||  |||||| |||  |||||  ||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||     
T  5754 gatttcgtagatttgacctttaagttgaatcttagatgtttttgagtacctgaacatgtataataatgattaggaaaaattgtagattgagattgaacca 5853  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-t 201  Q
    | ||||||||||| ||| | ||||| || ||||||||||||||||| |||||||||||||| ||||||| || | ||||||||||||| ||||||||| |    
T  5854 gtaatagtttaaggatgga-ttttgtgatttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgccttgtt 5952  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||| | | ||||||||| ||||||||||    
T  5953 taggttaaatgcgatctttgtcgcgcaagttgatgttagttgatctt 5999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 28439 - 28687
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  28439 cagatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 28538  T
Q  101 c-gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    |   ||| | ||| |||||||| ||||| ||  || ||||||||||||||| ||||| |||||||||||||| || |||      |||||||||||||||    
T  28539 ctacgaagacttt-agaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtacttgtgttacagaatgcctt 28637  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28638 gtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 28687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 2277 - 2521
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||||||||||| |    
T  2277 atttcgtaattttgacttttgagttgatccttaaatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagattgagattgaacctg 2376  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-tt 202  Q
    || ||| ||||||| | | || ||||||||  ||||||||||||||| ||||||||||||  | |||| || | ||  | ||||||||||||||||| ||    
T  2377 gattag-ttaagaacgtacttgtgggagttatacctgaactcgccatggcgagtagaggccattgcctcgcgaattgactagttacagaatgccttgttt 2475  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  2476 aggataaatgcgatctttgtcgcacaagttgatgtgagttgatctt 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 248
Target Start/End: Original strand, 660 - 911
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattga---- 98  Q
    |||||||||  |||||| |||  |||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||        
T  660 gatttcgtagatttgacctttaagttgaatcttagatgtttttgagtgcctgaacatgtataataatgattaggaaagattgtagattgagattgagatt 759  T
Q  99 --accgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
      ||| | ||||||||||| ||| ||||| | |||||||||||||||||||| |||||||||||||| ||||||| || | ||||||||||||| |||||    
T  760 gaacctgtaatagtttaaggatggatttt-gtgagttgcacctgaactcgccttagcgagtagaggccctcgcctcgcgaattacccagttacataatgc 858  T
Q  197 cttg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||| ||||||||||||||||||||||| | | ||||||||| ||||||||||    
T  859 cttgtttaggttaaatgcgatctttgtcgcgcaagttgatgttagttgatctt 911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 4 - 233
Target Start/End: Original strand, 23708252 - 23708479
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    |||||||| |||||||  ||| ||||||| ||||||||||||||||| |||| ||| | || ||||||||||||||| | ||||| |||||||||| |||    
T  23708252 atttcgtagttttgacccttgagttgatctttagatgtttttgagtgtctgaacatatgtattaatgattaggaaagttcgtagattgagattgaatcgg 23708351  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtta 203  Q
     ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |  |||    
T  23708352 -aatagtttaagaatggatttttgggagttacacctgaactcgccatagcgagtagaggctctcgccttgcgagttacccagttacagaatgcttgttta 23708450  T
Q  204 ggttaaatgcgatctttgtcacacgagttg 233  Q
    || |   ||||||||||||| |||||||||    
T  23708451 ggat-tttgcgatctttgtcgcacgagttg 23708479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 22133847 - 22134093
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  22133847 cagatttcgtacttttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 22133946  T
Q  101 c-gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    |  |||| | ||| |||||||| ||||| ||  || | ||||||||||||| ||||| |||||||||||||| || | |      |||||||| ||||||    
T  22133947 ctaggaagacttt-agaatgaa-ttttgtgaactg-aactgaactcgccatggcgagcagaggctctcgcctcgcgaatacttgtgttacagactgcctt 22134043  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22134044 gtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 22134093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 3 - 202
Target Start/End: Complemental strand, 25176331 - 25176132
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccg 102  Q
    ||||||||||||||||| |||| ||||| |||||||||||||||||||||||| ||||| |||| ||||||||||||| ||| ||| ||||||||||||     
T  25176331 gatttcgtaattttgacctttgagttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattaggaaaggttggagattgagattgaacct 25176232  T
Q  103 ggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||||||||||||||   ||||||| |||||  ||||||||||||||| |||||||||||| ||||||| || |  | | ||||||||||||||||||||    
T  25176231 ggaatagtttaagaacagatttttgagagttagacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaatgccttgtt 25176132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 23660512 - 23660307
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  23660512 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 23660413  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||| ||||||||  ||| ||| |   ||||||||||||||  ||||| |||||||||||||| |  ||| ||||||  ||||| ||||||||    
T  23660412 tggaaagattttagaatgaaacttttggaatctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagtgacccagaaacagagtgccttgt 23660313  T
Q  202 taggtt 207  Q
    ||||||    
T  23660312 taggtt 23660307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 35 - 248
Target Start/End: Complemental strand, 28406436 - 28406222
Alignment:
Q  35 tagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagttg 134  Q
    |||||| |||||||||||||| ||||| ||||||| |||||||||||||| |||||||||||||||| | ||   ||| ||||| || ||||| ||  ||    
T  28406436 tagatgcttttgagtgcctgaacatgtctaataataattaggaaagattggagaatgagattgaacctgtaaagattttagaataaaattttgtgaactg 28406337  T
Q  135 cacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgagttg 233  Q
     ||||||||||||||| |||||||||||||||||||| || |||      |||||| ||||||||| ||||||||||||||||| ||||| |||||||||    
T  28406336 aacctgaactcgccatggcgagtagaggctctcgcctcgcaagtacttgtgttacataatgccttgtttaggttaaatgcgatccttgtcgcacgagttg 28406237  T
Q  234 atgtgagttgatctt 248  Q
    |||||||||||||||    
T  28406236 atgtgagttgatctt 28406222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 23076930 - 23076691
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||| ||  ||||||||||||||| |||||||||||||| ||||| ||||||| ||||||||||| ||||| ||||||||| |||    
T  23076930 agatttcgtgattttgactattaagttgatccttagatgcttttgagtgcctgaacatgtctaataataattaggaaagaatgtaggatgagattggacc 23076831  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     |||| || || ||||||||  ||||| | |   ||||||||||||||  |||||||||||||||||||| || ||||||||||  ||||| ||||||||    
T  23076830 tggaa-agatttagaatgaaactttggaattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgt 23076732  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||   ||||| ||||||  ||||||||| || |||||||    
T  23076731 taggtt--ttgcgacctttgttgcacgagttgttgagagttga 23076691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 298446 - 298648
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||    
T  298446 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatataggatgagattgaacc 298545  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || |||||| || || ||||| |   ||||||||||||||  |||||||||||||||||||| || ||| ||||||  ||||| || ||||    
T  298546 tggaa-agatttagaatgaaacttgtgggattctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgacttg 298644  T
Q  201 ttag 204  Q
    ||||    
T  298645 ttag 298648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 23207634 - 23207523
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||||||||||| || ||||||| ||||||||||||    
T  23207634 cctgaactcgccatagcgagtagaggctctcgccttgcgagttgcccagttacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatg 23207535  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  23207534 tgagttgatctt 23207523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 27754065 - 27753862
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||| | ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  27754065 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctcaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 27753966  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| |||||||    
T  27753965 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttg 27753866  T
Q  201 ttag 204  Q
    ||||    
T  27753865 ttag 27753862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 22337605 - 22337400
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||| ||||||||| ||||||||||||||| |||||||||  ||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  22337605 agatttcgtgattctgacttttgagttgatccttagatgcttttgagtgtatgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 22337506  T
Q  102 gggaatagtttaagaatgaatttttgggagtt-gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || ||||||||  |||  |||||   ||||||| ||||||  |||||||||||||||||||| || ||| ||||||  |||||  | ||||    
T  22337505 tggaa-agatttagaatgaaactttttgagttctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttg 22337407  T
Q  201 ttaggtt 207  Q
    |||||||    
T  22337406 ttaggtt 22337400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 22737811 - 22738017
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||| | ||||||||||||||||||| ||||| |||||||||||||    
T  22737811 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatatctaataatgattaggaaagaatgtaggatgagattgaacc 22737910  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      |||   ||  |||||| || || ||||| |   | ||||||||||||  ||||| |||||||||||||| || ||| ||| ||  ||||| |||||||    
T  22737911 tagaaagattgtagaatgaaacttgtgggattctgaactgaactcgccacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttg 22738010  T
Q  201 ttaggtt 207  Q
    |||||||    
T  22738011 ttaggtt 22738017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 204
Target Start/End: Original strand, 32451562 - 32451763
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||| ||||||||||||  |    
T  32451562 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggagagaatgtaggatgagattgaacatg 32451661  T
Q  104 gaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||   ||  |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||||    
T  32451662 gaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgtt 32451761  T
Q  203 ag 204  Q
    ||    
T  32451762 ag 32451763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 207
Target Start/End: Original strand, 22730866 - 22731070
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||| ||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||| |    
T  22730866 atttcgtgattttaacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctg 22730965  T
Q  104 gaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||   ||  |||||| || || ||||| |   ||||||||||||||  | ||| | ||||||||||||  | ||| ||||||  ||||| |||||||||    
T  22730966 gaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggggagcaaaggctctcgcctcacgagtcacccagaaacagagtgccttgtt 22731065  T
Q  203 aggtt 207  Q
    |||||    
T  22731066 aggtt 22731070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 23286340 - 23286242
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||||| ||||||||||||    
T  23286340 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaac 23286242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 23654041 - 23654146
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||||||||||| ||||| ||||||||| |||||| ||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  23654041 agatttcataattttgacttttgagttgaaccttagatgcttttgactgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 23654140  T
Q  102 gggaat 107  Q
     |||||    
T  23654141 tggaat 23654146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 28291933 - 28292027
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagatt 96  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||    
T  28291933 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaagaatgattaggaaagaatgtagaatgagatt 28292027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 20309584 - 20309479
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||| ||| |||||||||||||   |||| ||||||||||||||||||| ||||| |||||||||||||    
T  20309584 agatttcgtatttttgacttttgagttgaaccttatatgcttttgagtgcctggatatgtctaataatgattaggaaagaatgtaggatgagattgaacc 20309485  T
Q  102 gggaat 107  Q
     |||||    
T  20309484 tggaat 20309479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 107
Target Start/End: Original strand, 37760 - 37863
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    |||||||| |||||||||||| || || ||||||||| |||||||||||||| ||||| |||||||||||||||||   ||||| ||||||||||||| |    
T  37760 atttcgtatttttgacttttgagtggaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaagatgtaggatgagattgaacctg 37859  T
Q  104 gaat 107  Q
    ||||    
T  37860 gaat 37863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 248
Target Start/End: Original strand, 23071618 - 23071839
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| | || ||  | ||||||||  ||    
T  23071618 gttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctgaaa-agacttagaatgaaaatt 23071716  T
Q  126 tgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtca 224  Q
    | | || |   ||| ||||||||||| ||||| |||||||||||||| || ||       |||||| |||||||| ||||||| |||| ||||||| ||     
T  23071717 tagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcgtttgtgttacaaaatgcctttttaggttgaatgagatctttttcg 23071815  T
Q  225 cacgagttgatgtgagttgatctt 248  Q
      ||||||||||||||||||||||    
T  23071816 ttcgagttgatgtgagttgatctt 23071839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 244
Target Start/End: Original strand, 22459327 - 22459433
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    ||||||||||||||||||||||||||||| |||| || |||      |  ||||||||||||||||||||||||| || |||||||  ||||||||||||    
T  22459327 ctgaactcgccatagcgagtagaggctcttgcctcgcgagtccttgtgagacagaatgccttgttaggttaaatgtgacctttgtcctacgagttgatgt 22459426  T
Q  238 gagttga 244  Q
    |||||||    
T  22459427 gagttga 22459433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 22412722 - 22412817
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| || ||||||||||| ||||||| |||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  22412722 ttagatgattctgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 22412817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 23207812 - 23207717
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| || ||||||||||| |||||||||||||||||||| ||| || |||| ||||||||||||  | | ||||||| |||| |||||||||    
T  23207812 ttagatgattatgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctaggaaagtttaaaaatggatttttggg 23207717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 7499 - 7608
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    |||||||||||||||||||||||||||||||||  | || |    ||  ||||||| | | |||||||| |||| || ||||||| ||||||||||||||    
T  7499 tgaactcgccatagcgagtagaggctctcgcctcacgagctcatgagagacagaatacttggttaggtttaatgtgacctttgtcgcacgagttgatgtg 7598  T
Q  239 agttgatctt 248  Q
    ||||||||||    
T  7599 agttgatctt 7608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 23791629 - 23791520
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    |||||||||||| |||||||||||||||||||| || ||       |  ||||||  ||||||||||||||||| || ||||||| ||||||||||||||    
T  23791629 tgaactcgccatcgcgagtagaggctctcgcctcgcgagcccttgtgagacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgatgtg 23791530  T
Q  239 agttgatctt 248  Q
    ||||||||||    
T  23791529 agttgatctt 23791520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 23005263 - 23005197
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||| ||||||||| |||||||||| ||| || | || |||||||||||    
T  23005263 ttagatgtttttgagtgcctgaacatgtataagaatgattaggcaagttttttgattgagattgaac 23005197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 202
Target Start/End: Original strand, 20519957 - 20520022
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||||| ||||||||||| |||||||||||||||| || |||| || ||||||||||| |||||||    
T  20519957 cctgaagtcgccatagcgtgtagaggctctcgcctcgcgagttgcctagttacagaataccttgtt 20520022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 22412900 - 22412953
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttaca 190  Q
    ||||||||||||||||||||||||||||||||||| |  |||| ||||||||||    
T  22412900 cctgaactcgccatagcgagtagaggctctcgcctcgtgagttgcccagttaca 22412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 23100862 - 23100915
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  23100862 agatttcgtaattttgacttttgagttgaacctcagatgtttttaagtgcctga 23100915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 20519790 - 20519874
Alignment:
Q  45 tgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||  || | |||| || |||| |||||||||    
T  20519790 tgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacatgggaaagttaaaaaatggatttttggg 20519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 18786471 - 18786566
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| |||||||||||||| || ||||| || |||||||| ||| || |||| |||||||||||| |  | ||||||| |||| |||||||||    
T  18786471 ttagatgattttgagtgcctgaacacgtatattattgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 18786566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 18786667 - 18786778
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||| |||||||||||||||||||||||||| || || |    ||  ||||||  | |||||||||  |||| ||  |||||| ||||||||||||    
T  18786667 cctgaacttgccatagcgagtagaggctctcgcctcgcgagctcaagagagacagaacactttgttaggtctaatgtgacttttgtcgcacgagttgatg 18786766  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  18786767 tgagttgatctt 18786778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 25109186 - 25109136
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||| || ||||||| ||||||||||||| ||||||||    
T  25109186 ccttgttaggttaaatgtgacctttgtcgcacgagttgatgtaagttgatc 25109136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 39827602 - 39827648
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaag 80  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||    
T  39827602 ttagatgattttgagtgcctgaatatgtataataatgattaggaaag 39827648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 22740607 - 22740664
Alignment:
Q  17 gacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||| ||||| ||||||||||||||||||||||||  ||||||| ||| |||||    
T  22740607 gacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 22740664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 22758362 - 22758419
Alignment:
Q  17 gacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||| ||||| ||||||||||||||||||||||||  ||||||| ||| |||||    
T  22758362 gacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 22758419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 23038518 - 23038469
Alignment:
Q  6 ttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    ||||||||||||||||||| | ||| ||||||||||| ||||||||||||    
T  23038518 ttcgtaattttgacttttgagatgaaccttagatgttgttgagtgcctga 23038469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 22798769 - 22798809
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  22798769 ttttgacttttgagttgaaccttagatgtttttgagtgcct 22798809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 25963356 - 25963400
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  25963356 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 25963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 45677798 - 45677838
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  45677798 ttttgacttttgagttgaaccttagatgtttttgagtgcct 45677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Original strand, 7331 - 7406
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||| || ||||||||||| || |||||||||||||| || ||| || |||| || |||||||||    
T  7331 gttgatctttagatgattctgagtgcctgaacaagtataataatgattcggcaagtttttagattgtgattgaacc 7406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 19672368 - 19672293
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||| ||||||||| |||||||||  |||  ||||||||||||||||||| ||| || |||| |||| |||||||    
T  19672368 gttgaaccttagatgattttgagtgtttgaatatgtataataatgattaggcaagtttttagattgagcttgaacc 19672293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 18546551 - 18546617
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||| ||| || |||| ||| |||||||    
T  18546551 ttagatgattttgagtgcctgaatatgtataagaatgattaggcaagtttttagattgaaattgaac 18546617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Complemental strand, 25109412 - 25109330
Alignment:
Q  45 tgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttg 127  Q
    |||||| |||| |||||||||||||||||||| ||| || |||| ||||||| |||| |  | ||||||| |||| |||||||    
T  25109412 tgagtgactgaacatgtataataatgattaggcaagtttttagattgagattcaacctgcgaaagtttaaaaatggatttttg 25109330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 34137454 - 34137412
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattagg 76  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||    
T  34137454 ttagatggttttgagtgcctgaacatgtataagaatgattagg 34137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Complemental strand, 3539264 - 3539215
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagt 186  Q
    |||||||||||||||||||||||||   |||||||||| |||||| ||||    
T  3539264 cctgaactcgccatagcgagtagagtggctcgccttgcgagttactcagt 3539215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 22811568 - 22811617
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| |||||||||||||||| ||||| |||||| || ||||||||||||    
T  22811568 attttgtaattttgacttttgagttgaaccttaggtgcttttgagtgcct 22811617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 23005105 - 23004997
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||| ||||||   ||||||| || || | ||||||| |||||| |||||||||| |   ||||||||||||| |||| | || |     
T  23005105 cctgaactcgccatagcgggtagagtggctcgcctcgcgagctgcccagtttcagaataccttgttagggt-tttgcgatctttgtcgcacgggatgtta 23005007  T
Q  237 tgagttgatc 246  Q
    ||||||||||    
T  23005006 tgagttgatc 23004997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 24658116 - 24658055
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||||||| ||||| ||||||||| |||||||||||| |  |||| || |||||||||    
T  24658116 ttttgacttttgagttgaaccttagatgcttttgagtgcctaaagatgtttattaatgatta 24658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 24716175 - 24716224
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||| | |||||||| | ||| ||||||||||||||||||||||    
T  24716175 atttcgtaatctggacttttgagatgaaccttagatgtttttgagtgcct 24716224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 40621851 - 40621888
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtg 50  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  40621851 ttttgacttttgagttgaaccttagatgtttttgagtg 40621888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 21917955 - 21917999
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||||    
T  21917955 gtaattttgacttttgagtttaaccttagatgcttttgagtgcct 21917999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 101
Target Start/End: Original strand, 22459151 - 22459215
Alignment:
Q  37 gatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| ||||||| |||||||||||| |||||  |||| ||| || |||| ||||||||||||    
T  22459151 gatgtttctgagtgcttgagcatgtatattaatggataggcaagtttttagattgagattgaacc 22459215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 37525144 - 37525100
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||| | ||||||||| ||||||||||||    
T  37525144 gtaattttgacttttgagttaaaccttagatgcttttgagtgcct 37525100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 13 - 248
Target Start/End: Complemental strand, 9555 - 9320
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat-agtt 111  Q
    |||||||||||| | ||| ||||||||| |||||||||||||| || || |||||| |||||||||||| |||||| |||||||| ||| ||||  ||||    
T  9555 ttttgacttttgagatgacccttagatgcttttgagtgcctgaacaagtctaataacgattaggaaagaatgtagagtgagattggacctggaaagagtt 9456  T
Q  112 taagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaat 211  Q
    || ||||||||||||| ||  || ||||||||||||||| |||||||||||||||||||| || || |||||| ||||||||||||||| ||||||||||    
T  9455 ta-gaatgaatttttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgctaggttaaat 9357  T
Q  212 gcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||| ||||| ||||||||| ||||||||||||||    
T  9356 gcgatccttgtcgcacgagttgttgtgagttgatctt 9320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 114; Significance: 6e-58; HSPs: 3)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 7027 - 6779
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||| |||||||||| |||||||| |||||||||  ||||| ||||||| |||||||||||||| ||| |||||||||||    
T  7027 cagatttcgtaattttgacttttgagttgatcctttgatgtttt-gagtgcctggacatgtctaataataattaggaaagattggagattgagattgaac 6929  T
Q  101 cgggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    | ||||||||||||||| | || || ||||||||  ||||||||||||||| |||||| ||||| ||| ||| || | ||  | ||||||| ||||||||    
T  6928 ctggaatagtttaagaacgaaacttgtgggagttatacctgaactcgccatggcgagtggaggccctcccctcgcgaattgactagttacaaaatgcctt 6829  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | ||||| ||||||||||||||||| ||| ||||||||||||||||||||    
T  6828 gtttaggataaatgcgatctttgtcgcacaagttgatgtgagttgatctt 6779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 8824 - 8714
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||||||||||||||||||||| ||||||| || |||      |  ||||||||||||||||||||||||| || ||||||| |||||||||||||    
T  8824 ctgaactcgccatagcgagtagaggccctcgcctcgcgagtccttgtgagacagaatgccttgttaggttaaatgtgacctttgtcgcacgagttgatgt 8725  T
Q  238 gagttgatctt 248  Q
    || ||||||||    
T  8724 gaattgatctt 8714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Complemental strand, 9011 - 8911
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||||| ||||| | |||||||||||||| ||||||||||||||| |||| ||| || |||| ||| ||| |||| || | ||||| | |||| |||||    
T  9011 gttgatctttagaagattttgagtgcctgaacatgtataataatgactaggcaagtttttagattgacattaaacccgggaaagtttgaaaatggatttt 8912  T
Q  126 t 126  Q
    |    
T  8911 t 8911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 32574 - 32339
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  32574 cagattttgtaattttgacttttgagttgatccttagatgtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 32475  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | ||||    || |||||||| ||||| ||  || ||||||||||||||| ||||| |||||||||| ||| || |||      |||||| |||||||||    
T  32474 ctggaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcgagcagaggctctcacctcgcgagtacttgtgttacataatgccttg 32375  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgat 235  Q
     ||||||||||||||||||||||| ||| |||||||    
T  32374 tttaggttaaatgcgatctttgtcgcactagttgat 32339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 2433 - 2680
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||| ||||||||||||||| | ||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||| |||||||| ||||||    
T  2433 cagatttcataattttgacttttgggatgatccttagatgcttttgagtacctgaacatgtctaataatgattaggaaagattggagaatgagtttgaac 2532  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
    | | ||   ||| ||||||||  |||| ||  || ||||||||||||||| |||||||||||||||||||| || |||      ||||||||||||||||    
T  2533 ctgtaaagattttagaatgaa-atttgtgaactgaacctgaactcgccatggcgagtagaggctctcgcctcgcgagtacttgtgttacagaatgccttg 2631  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
     |||||  ||||| |||| ||||| ||||||||||||||||||||||||    
T  2632 tttaggaaaaatgtgatccttgtcgcacgagttgatgtgagttgatctt 2680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 4 - 248
Target Start/End: Original strand, 1934 - 2179
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||  |||| ||||| |||||||||||||||||||||| |||||||||||||||       
T  1934 atttcgtatttttgacttttgagttgatccttagatgtttttgagtcactgaacatgtctaataatgattaggaaagattggagaatgagattgaacata 2033  T
Q  104 gaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-tt 202  Q
     ||    || |||||||| ||||| ||  || ||||||||||||||| || || |||||||||||||| || |||      |||||||||||||||| ||    
T  2034 aaaagactttagaatgaaattttgtgaactgaacctgaactcgccatggcaagcagaggctctcgcctcgcgagtacttgtgttacagaatgccttgttt 2133  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||| ||||| ||||||| |||||||||| |||||    
T  2134 aggttaaatgcgatccttgtcgcacgagtggatgtgagttaatctt 2179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 43439 - 43584
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| |||||||||||||||||||||||| ||||| |||| |||||||| ||||||| |||| |||||||||||| ||||||||||||||||| |||||    
T  43439 gttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttt 43538  T
Q  126 tgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||| |||||| |||||||||  |||||||||||||||||||    
T  43539 tgggagttacacctgtactcgccatgacgagtagaggctctcgcct 43584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 47359 - 47504
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| |||||||||||||||||||||||| ||||| |||| |||||||| ||||||| |||| |||||||||||| ||||||||||||||||| |||||    
T  47359 gttgaaccttagatgtttttgagtgcctgaacatgtctaattatgattagaaaagattctagattgagattgaacctggaatagtttaagaatggatttt 47458  T
Q  126 tgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||| |||||| ||| |||||  |||||||||||||||||||    
T  47459 tgggagttacacctgtactagccatgacgagtagaggctctcgcct 47504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 94; Significance: 5e-46; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 101885 - 101638
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  101885 cagatttcgtaatttttacttttgagttgatccttagaagtttttgagtgcctgaacatgtctaataatgattaggaaagattggagaatgagattgaac 101786  T
Q  101 cggga-atagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
    | ||| | | ||| ||||||||||||  | | ||| ||||||||||||||| ||||| ||||||||| |||| |  |||      |||| ||| || |||    
T  101785 ctggagagacttt-agaatgaattttgtgaacttg-acctgaactcgccatggcgagcagaggctcttgcctcgggagtacttgtgttatagactgtctt 101688  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    | |||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  101687 gtttaggttaaatgtgatccttgtcgcacgagttgatgtgagttgatctt 101638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 63 - 248
Target Start/End: Original strand, 39864 - 40050
Alignment:
Q  63 taataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagagg 162  Q
    |||||||| ||||||||||||| ||| ||| ||| |||| ||||||||||||||| ||| || ||||||||  ||||||||| ||||| || ||||||||    
T  39864 taataatggttaggaaagattggagattgacattcaacctggaatagtttaagaacgaacttgtgggagttatacctgaacttgccatggcaagtagagg 39963  T
Q  163 ctctcgccttgctagttacccagttacagaatgcctt-gttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||| || || || | ||||||| ||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  39964 ctctcgcctcgcgagctaactagttacaaaatgccttatttaggttaaatgcgatctttgttgcacgagttgatgtgagttgatctt 40050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39639 - 39693
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  39639 cagatttcataattttgacttttgagttgatccttagatgttttcgagtgcctga 39693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 100683 - 100619
Alignment:
Q  185 gttacagaatgccttgt-taggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||| |||||||||| || ||||||||||||||||||| ||||||||||||||| ||| ||||    
T  100683 gttacaaaatgccttgtctaagttaaatgcgatctttgtcgcacgagttgatgtgacttgctctt 100619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 394 - 191
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  394 agatttcgtgattttgacttttgagttgatccttatatgtttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 295  T
Q  102 gggaatagtttaagaatgaatttttgggagtt-gcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| || || ||||||||  |||  |||||   |||||||||||||| ||||||||||||||||||||  || ||| ||||||  ||||| |||||||    
T  294 tggaa-agatttagaatgaaactttttgagttctgacctgaactcgccacagcgagtagaggctctcgccacgcgagtgacccagaaacagagtgccttg 196  T
Q  201 ttagg 205  Q
    |||||    
T  195 ttagg 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 92; Significance: 8e-45; HSPs: 7)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 63052 - 62913
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||||||||||||||    
T  63052 cagatttcgtaaatttgacttttgagttgatccttagatgtttttgagtgcatgaacatgtctaataatgattaggaaagattggagaatgagattgaac 62953  T
Q  101 cgggaatagtttaagaatgaatttttgggagttgcacctg 140  Q
    | ||||   ||| |||||||||||||| ||||||||||||    
T  62952 ctggaaatattttagaatgaatttttgtgagttgcacctg 62913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 136132 - 136243
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| || ||||  ||| ||| ||||  ||||||||||||||||| || |||||||  |||||||||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatg 136231  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  136232 tgagttgatctt 136243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 144840 - 144951
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| || ||||  ||| ||| ||||  ||||||||||||||||| || |||||||  |||||||||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatg 144939  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  144940 tgagttgatctt 144951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 125072 - 124981
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgag 93  Q
    |||||| || ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||    
T  125072 agatttggtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgag 124981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 135965 - 136049
Alignment:
Q  45 tgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| ||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| ||||||||||||||    
T  135965 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttggg 136049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 45 - 129
Target Start/End: Original strand, 144673 - 144757
Alignment:
Q  45 tgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| ||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| ||||||||||||||    
T  144673 tgagtgcttgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttggg 144757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 175254 - 175202
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctg 54  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  175254 agatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctg 175202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 2 - 202
Target Start/End: Original strand, 20057 - 20255
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| | ||||||||||| ||||||||||||||| |||||||| ||||| ||||| ||||||||| ||||||||| |||||||||||||||||||    
T  20057 agatttcgtgaatttgacttttgagttgatccttagatgcttttgagttcctgaacatgtttaataatgagtaggaaagaatgtagaatgagattgaacc 20156  T
Q  102 gggaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||| ||  ||||||||||| ||||||| || || ||||||||||||||| |||||||||||||||||||| || |||| || | |||||||| ||||||    
T  20157 tggatta-attaagaatgaactttttggaagctg-acctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacagaa-gccttg 20253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 65425 - 65478
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||| ||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  65425 agattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctga 65478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 1719 - 1902
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtt 111  Q
    ||||||||||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| ||||   ||    
T  1719 attttgacttttgagttgatccttagatgtttt-gagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatt 1817  T
Q  112 taagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgc 196  Q
    | ||||||||  ||||| | |   ||||||| ||||||| ||||| |||||||||||||| || ||| |||||||||||||||||    
T  1818 ttagaatgaaactttggaaatctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgc 1902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 114 - 248
Target Start/End: Original strand, 10283 - 10417
Alignment:
Q  114 agaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgc 213  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||| || ||||  || |||||| | ||||||||||||||||||||    
T  10283 agaatgaatttttgtgagttacacctgaactcgccaaagcgagtagaggctctcgcctcgcgagttgtcctgttacatactgccttgttaggttaaatgc 10382  T
Q  214 gatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||  ||||||||||||||||||||||||    
T  10383 gatctttgttgcacgagttgatgtgagttgatctt 10417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 10200 - 10289
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatga 92  Q
    ||||||||||||||||| |||| | ||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||| ||||||||    
T  10200 gatttcgtaattttgacctttgagatgaaccttagatgtttttgagtgcctgaacatgtctaataatgattagtaaagattttagaatga 10289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 1069 - 994
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattagga 77  Q
    |||||||||| |||||||||||| ||||| |||||||||| |||||||||  || ||||| ||||| |||||||||    
T  1069 agatttcgtatttttgacttttgagttgaaccttagatgtctttgagtgctagaacatgtctaatattgattagga 994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 244
Target Start/End: Complemental strand, 12416 - 12178
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| |||||||||||||  |||||||||||||| ||||||||| ||||  |||| ||||||||||||||||||| ||||||||||||||||||| |    
T  12416 atttcgtgattttgacttttgaattgatccttagatgcttttgagtgtctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 12317  T
Q  104 gaatagtttaagaatgaa-tttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    || ||  ||||||||||| ||||||| |  || ||||||||||||||| |||||||||||||||| ||| || |||| |||| ||||||||  |||  ||    
T  12316 gatta-attaagaatgaactttttggaaactg-acctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacagaagccctgttt 12219  T
Q  203 aggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||| |   ||||||||||||||||||||| | || |||||||    
T  12218 aggat-tttgcgatctttgtcacacgagtcgttgagagttga 12178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6084 - 5964
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||| || || |||||||||||||||||||||| ||| |||||||||||    
T  6084 cagatttcgtaattttgactttttagttgatccttagatgtttttgagtgcctgaacaggtctaataatgattaggaaagattggagattgagattgaac 5985  T
Q  101 cgggaatagtttaagaatgaa 121  Q
      |||||||||||||||||||    
T  5984 ttggaatagtttaagaatgaa 5964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 5952 - 5887
Alignment:
Q  184 agttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||| || ||| |||||| |||  ||||| ||| ||||||||||||||||||||    
T  5952 agttacagaatgccttatttaggctaaatgtgattcttgtcgcacaagttgatgtgagttgatctt 5887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 4998 - 4830
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  4998 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacc 4899  T
Q  102 -gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgc 169  Q
     || || | ||| ||||||||  ||||||| |   ||||||||||||||| ||||| ||||||||||||    
T  4898 tggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgc 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 12580 - 12412
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  12580 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacc 12481  T
Q  102 -gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgc 169  Q
     || || | ||| ||||||||  ||||||| |   ||||||||||||||| ||||| ||||||||||||    
T  12480 tggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgc 12412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 2 - 169
Target Start/End: Complemental strand, 22532 - 22364
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  22532 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacc 22433  T
Q  102 -gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgc 169  Q
     || || | ||| ||||||||  ||||||| |   ||||||||||||||| ||||| ||||||||||||    
T  22432 tggaaagatttttagaatgaaactttgggaatctgacctgaactcgccatggcgagcagaggctctcgc 22364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 18286 - 18326
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  18286 ttttgacttttgagttgaaccttagatgtttttgagtgcct 18326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 13 - 205
Target Start/End: Original strand, 25707 - 25899
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagttt 112  Q
    |||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||| | ||   ||     
T  25707 ttttgacttttgagttgatccttagatggttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctgaaaagattg 25806  T
Q  113 aagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttagg 205  Q
     ||||||||||||||| | |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| ||||||||||||    
T  25807 tagaatgaatttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttagg 25899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 201
Target Start/End: Original strand, 33125 - 33325
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||| ||||||| ||||||||||||||| || ||||||||||  ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  33125 agatttcgtgattttcacttttgagttgatccttagatgcttctgagtgcctggacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 33224  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||| |||||| || |||||| |||   ||||||||||||||  ||||| | |||||||||||| ||  || ||||||  ||||| |||||||    
T  33225 tggaaagattttagaatgaaacttttggaagtcttacctgaactcgccacggcgagcaaaggctctcgcctcgcgtgtgacccagaaacagagtgccttg 33324  T
Q  201 t 201  Q
    |    
T  33325 t 33325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 7841 - 7952
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||||||| |||||||||||| || |||| |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  7841 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagggtaaatgcgatctttgtcgcacgagttgatg 7940  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  7941 tgagttgatctt 7952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 28911 - 29156
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  28911 agattttgtaattttgacttttgggttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 29010  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | |||||| || ||| | || |   ||| ||||| ||||| ||||| |||||||||||||| |  ||       |||||||||||||||     
T  29011 tagaa-agacttagaatgaaaatttagagaatctgacc-gaactagccatggcgagcagaggctctcgcctcgtgagcgtttgtgttacagaatgccttt 29108  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| |||||||||||||||   ||||||||||||||||||||||    
T  29109 ttaggttgaatgcgatctttgtcgttcgagttgatgtgagttgatctt 29156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 194
Target Start/End: Complemental strand, 17268 - 17078
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgg 103  Q
    ||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |    
T  17268 atttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttaataatgattaggaaagaatgtagaatgagattgaacctg 17169  T
Q  104 gaatag-tttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaat 194  Q
    | |||| ||| ||||| ||  |||| || |   ||||||||||||||| ||||| |||||||||||||| || ||| ||| | |||||||||    
T  17168 g-atagattttagaataaaactttgagaatatgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaat 17078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 84; Significance: 5e-40; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 205
Target Start/End: Original strand, 32590 - 32793
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| || || ||||||||| ||||||||| |||| ||||| |||||||||||||||| || || ||||||||||||||||    
T  32590 agatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacc 32689  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     | ||   ||| |||||||||||||| ||||||||||  ||||||||| |||||| |||||||| ||||| || ||| |||||   |||||||| |||||    
T  32690 tgtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgt 32789  T
Q  202 tagg 205  Q
    ||||    
T  32790 tagg 32793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 46415 - 46212
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| || || ||||||||| ||||||||| |||| ||||| |||||||||||||||| || || ||||||||||||||||    
T  46415 agatttcgtgattttgacttttgagtcgaaccttagatgcttttgagtgtctgaacatgtctaataatgattaggaaggactggagaatgagattgaacc 46316  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     | ||   ||| |||||||||||||| ||||||||||  ||||||||| |||||| |||||||| ||||| || ||| |||||   |||||||| |||||    
T  46315 tgtaaagattttagaatgaatttttgtgagttgcaccctaactcgccacagcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgt 46216  T
Q  202 tagg 205  Q
    ||||    
T  46215 tagg 46212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 16566 - 16473
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaa 106  Q
    ||||||||||||| ||||||||||||  | |||||||||||||| ||||| ||||||||||||||||||| ||||| | ||||||||||| ||||    
T  16566 attttgacttttgagttgatccttagg-gcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacctggaa 16473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 15246 - 15415
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||| |||| ||||||||||||| ||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||| ||||||||||||||||| |    
T  15246 agatatcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtttaataatgattaggaaagaatgtagaatgagattgaatc 15345  T
Q  102 gggaatag-tttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
     || |||| ||| ||||||||  ||||||| |   ||||||||||||||||||||| ||||||||||||||    
T  15346 tgg-atagattttagaatgaaactttgggaatctgacctgaactcgccatagcgagcagaggctctcgcct 15415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 137 - 248
Target Start/End: Complemental strand, 12924 - 12813
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||| |||||||||||||||||| || || |    ||  ||||||  ||||||||||||||||| || ||||||| ||||||| ||||    
T  12924 cctgaactcgccatagggagtagaggctctcgcctcgcgagctcatgagagacagaacaccttgttaggttaaatgtgacctttgtcgcacgagtggatg 12825  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  12824 tgagttgatctt 12813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 13102 - 13007
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| |||||||||||||| |||||||| ||||||||||| ||| || |||| |||||||||||| |  | ||||||| |||| |||||||||    
T  13102 ttagatgattttgagtgcctgaccatgtatattaatgattaggcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 13007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 39249 - 39009
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||||||||||||   ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  39249 agatttcgtaattttgactttgaagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 39150  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     |||| || ||  |||||||  ||  ||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||| | || |||||    
T  39149 tggaa-agattttgaatgaaacttgtggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacatagtgacttgt 39051  T
Q  202 taggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||   ||||| ||||||  ||||||||| || |||||||    
T  39050 taggtt-tttgcgacctttgttgcacgagttgttgagagttga 39009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 79; Significance: 5e-37; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 2341 - 2171
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  2341 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 2242  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
     ||||   ||  |||||| || || ||||| |   ||||||||||||||| ||||||||||||| ||||||    
T  2241 tggaaagattgtagaatgaaacttgtgggattctgacctgaactcgccatggcgagtagaggctatcgcct 2171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 13 - 244
Target Start/End: Original strand, 207161 - 207392
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagttt 112  Q
    |||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||| ||| ||||| ||||||||||||| |||| ||  |    
T  207161 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggagagaatgtaggatgagattgaacctggaa-agact 207259  T
Q  113 aagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaa 210  Q
     ||||||||  ||||| || |   | ||||||||||||| ||||| |||||||||||||| || ||        ||||| ||||| ||| ||||||||||    
T  207260 tagaatgaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcactagtattacacaatgctttgtttaggttaaa 207358  T
Q  211 tgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||||||||| ||||||||| | ||||||||    
T  207359 tgcgatctttgtcgcacgagttgttatgagttga 207392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 119214 - 119280
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  ||||||||||||||||||  ||| || |||| |||||||||||    
T  119214 ttagatgattttgagtgcctgaatatgtataataatgattagacaagtttttagattgagattgaac 119280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 207
Target Start/End: Complemental strand, 832 - 627
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||||    
T  832 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattagaaaagaatgtagaatgagattgaacc 733  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
      |||    || ||||||||  ||| ||| |   | |||||||||||   |||||||||||||||||||| || ||| ||||||  ||||| || |||||    
T  732 tagaaagaatttagaatgaaacttttggaatctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgt 633  T
Q  202 taggtt 207  Q
    ||||||    
T  632 taggtt 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 184
Target Start/End: Complemental strand, 3960 - 3777
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||| ||||||| ||||||||| |||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  3960 agatttcgtgattttgacttttgagttgatctttagatgcttttgagtgtctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 3861  T
Q  102 gggaatagtttaagaat-gaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttaccca 184  Q
     |||||  ||  |||||  || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| |||||    
T  3860 tggaatgattgtagaatcaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgaccca 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 2 - 202
Target Start/End: Original strand, 16230 - 16431
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||    
T  16230 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttagaatgagattgaacc 16329  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   |||  ||||| ||  ||||| | |   ||||||||||||||| ||||| |||||||||||||| || ||| |||||   ||||| |||||||    
T  16330 tggaaagattttcgaatgaaacgtttggaaatctaacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttg 16429  T
Q  201 tt 202  Q
    ||    
T  16430 tt 16431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 204
Target Start/End: Complemental strand, 20893 - 20690
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  20893 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 20794  T
Q  102 gggaatagttta-agaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     |||| || ||| |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||  ||| ||  ||||| ||||||    
T  20793 tggaa-agattatagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagcgacctagaaacagagtgcctt 20695  T
Q  200 gttag 204  Q
    |||||    
T  20694 gttag 20690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 2 - 206
Target Start/End: Complemental strand, 40401 - 40198
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| || ||||||||||||| || ||||| |||||||||||||    
T  40401 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtttattaatgattaggaaggaatgtaggatgagattgaacc 40302  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     |  | | ||  |||||||| |||||| | |   ||||||||||||||  |||||||||||||||||||| || ||| ||||||  ||||| | ||||||    
T  40301 tgacaga-ttgtagaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagtaccttgt 40203  T
Q  202 taggt 206  Q
    |||||    
T  40202 taggt 40198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 19649 - 19760
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||| |||||||||||||||||| |  |||| |||||||||||||  ||||||||||||||||| || ||||||| |||| ||||||     
T  19649 cctgaactcgccatagggagtagaggctctcgcctcgtgagttgcccagttacagaacaccttgttaggttaaatgtgacctttgtcgcacgggttgata 19748  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  19749 tgagttgatctt 19760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 593 - 692
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||    
T  593 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtagaacgagattgaacc 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 167
Target Start/End: Original strand, 8123 - 8288
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||| || || ||| | |||| ||||||| |||| |||||| |||||| ||||||||||||| ||| || ||||||||||||||||     
T  8123 agatttcgtgattttgagttgtgagtttaaccttggatgtttatgagggcctgaacatgtacaataatgattaggcaaggttttagaatgagattgaact 8222  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctc 167  Q
     |||||||| | |||||| ||| ||| | |||  |||  || ||||| | ||||||||||||||||    
T  8223 tggaatagtgtcagaatggattcttgagtgttttaccctaaatcgccgtggcgagtagaggctctc 8288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 16148 - 15903
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||| | ||||||||||||||| ||||||||||||||  |||| ||||||||||||||||||| |||||||||||||||||||    
T  16148 agattttgtaattttgactttagagttgatccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtagaatgagattgaacc 16049  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | | |||| || ||| | || |   ||| ||||||||||| ||||| |||||||||||||| || || |     |||||||||||||||     
T  16048 -tgaaaagactcaaaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcttttgtgttacagaatgccttt 15951  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||  |||||||||||||||   ||||||||||||||||||||||    
T  15950 ttaggtggaatgcgatctttgtcgttcgagttgatgtgagttgatctt 15903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 1827 - 1774
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  1827 agatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 1774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 126
Target Start/End: Original strand, 17921 - 18021
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||  |||||||||| |||  ||||||||||||||||||| ||| || |||| |||||||| ||| || |  |||||| |||| |||||    
T  17921 gttgaaccttagataattttgagtgcatgaatatgtataataatgattaggcaagtttttagattgagattggacctgggaaggtttaaaaatggatttt 18020  T
Q  126 t 126  Q
    |    
T  18021 t 18021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 76; Significance: 3e-35; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 248
Target Start/End: Complemental strand, 34610 - 34365
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  34610 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 34511  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | ||||||||  ||||| || |   ||| ||||||||||| ||||| |||||||||||||| || | ||     |||||| ||| ||||     
T  34510 -tgaaaagacttagaatgaaaatttggagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgattttttgtgttacataattccttt 34413  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| ||||||||||||||    | ||||||||||||||||||||    
T  34412 ttaggttgaatgcgatctttgttgttctagttgatgtgagttgatctt 34365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 13582 - 13341
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||| |||| |||||||||||||| ||||| ||||||||||| |    
T  13582 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaattatgattaggaaagaatgtaggatgagattgaatc 13483  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     | ||   ||  |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  || || || ||||    
T  13482 tgaaaagattgtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttg 13383  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||   ||||| ||||||  ||||||||| || |||||||    
T  13382 ttaggtt--ttgcgacctttgttgcacgagttgttgagagttga 13341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 339582 - 339787
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||   ||| |||||||||||||||| || ||||| |||||||||||||    
T  339582 agatttcgtgattttgacttttgagttgatccttaaatgcttttgagtgcctgaatttgtctaataatgattaggaatgaatgtaggatgagattgaacc 339681  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     ||||   ||  |||||||| |||||||| |   || |||||||||||  ||||| |||||||||||||| || ||| ||||||  | ||| ||||||||    
T  339682 tggaaagattgtagaatgaacttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaatagagtgccttgt 339781  T
Q  202 taggtt 207  Q
    ||||||    
T  339782 taggtt 339787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 71776 - 71729
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    ||||||||| ||||||||||||| ||||| |||||||||| |||||||    
T  71776 agatttcgtgattttgacttttgagttgaaccttagatgtctttgagt 71729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 73; Significance: 2e-33; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 52392 - 52196
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtt 111  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||| ||||   ||    
T  52392 attttgacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaaagatt 52293  T
Q  112 taagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggtt 207  Q
      |||||| || || ||||| |   ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  || || || |||||||||||    
T  52292 gtagaatgaaacttgtgggattctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaactgagtgtcttgttaggtt 52196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 167621 - 167720
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||    
T  167621 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacc 167720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 37740 - 37806
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||| ||  |||||||| |||||||||||||| || |||| ||| |||||||    
T  37740 ttagatgattttgagtgccagaatatgtataagaatgattaggaaagtttttagattgaaattgaac 37806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 167745 - 167813
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||||||    
T  167745 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 167813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 248
Target Start/End: Original strand, 2076 - 2321
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||| ||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  2076 agattttgtaattttgactgttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 2175  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      ||| ||  | |||||| || ||| | || |   ||| ||||||||||| ||||| |||||||||||||| || ||       |||||||||||||||     
T  2176 -tgaaaagacttagaatgaaaatttagagaatctgacc-gaactcgccatggcgagcagaggctctcgcctcgcgagcgtgtgtgttacagaatgccttt 2273  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||| ||||||||||||| |   |||||| |||||||||||||||    
T  2274 ttaggttgaatgcgatctttgccgttcgagtttatgtgagttgatctt 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 7925 - 8167
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  7925 agattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 8024  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg- 200  Q
     |||| ||  | ||||||||  |||||    |  | | ||||||||||| ||||| |||||||||||||| || ||       ||||||||||||||||     
T  8025 tggaa-agacttagaatgaaactttggagaatctaacagaactcgccatggcgagcagaggctctcgcctcgcgagcactagtgttacagaatgccttgt 8123  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||||||||||||||||||| ||||||||||| || |||||    
T  8124 ttaggttaaatgcgatctttgtcgcacgagttgatatgggttga 8167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 53134 - 53214
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaa 114  Q
    ||||||| |||||||||||||| || ||||||||||||||||| ||| || |||| |||||||||||| || | |||||||    
T  53134 ttagatgattttgagtgcctgaacaagtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 53214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 53314 - 53424
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgt 237  Q
    |||||||||||||||||||||||||| ||||||| || |||      |  ||||||  |||||| ||||| | || |  ||||||| |||||||||||||    
T  53314 ctgaactcgccatagcgagtagaggccctcgcctcgcgagtccttgtgagacagaacaccttgtaaggtttattgtgtcctttgtcgcacgagttgatgt 53413  T
Q  238 gagttgatctt 248  Q
    |||||||||||    
T  53414 gagttgatctt 53424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 23933 - 24135
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||||||  |||||||||||||| ||||| ||||||||||||||||| | ||||| |||||||||||||    
T  23933 agatttcgtgattttgacttttgagttgatccttagattcttttgagtgcctgaacatgtctaataatgattaggaaaaaatgtaggatgagattgaacc 24032  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| | ||  |||||| || || ||||| |   |||||||||||||| |||||| |||||||||||||| || ||| ||| ||  ||| | |||||||    
T  24033 tggaa-aattgtagaatgaaacttgtgggattctgacctgaactcgccacagcgagcagaggctctcgcctcgcgagtgacctagaaacaaagtgccttg 24131  T
Q  201 ttag 204  Q
    ||||    
T  24132 ttag 24135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 34553 - 34593
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||| || ||||| ||||||||||||||||||||||    
T  34553 ttttgacttgtgagttgaaccttagatgtttttgagtgcct 34593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 171
Target Start/End: Complemental strand, 20602 - 20433
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| |||||||||| || ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  20602 agatttcgtgattttgacttctgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaataagattgaacc 20503  T
Q  102 gggaatagtttaagaatgaatttttgggagtt-gcacctgaactcgccatagcgagtagaggctctcgcct 171  Q
     |||| || || ||||||||  ||| ||||||   |||||| |||||||   |||| ||||||||||||||    
T  20502 tggaa-agatttagaatgaaacttttggagttctgacctgagctcgccacgacgagcagaggctctcgcct 20433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 415 - 318
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaa 99  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||    
T  415 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaa 318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 5191 - 5094
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaa 99  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||    
T  5191 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaa 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 291 - 243
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttaccca 184  Q
    ||||||||||||||| ||||| |||||||||||||| || ||| |||||    
T  291 acctgaactcgccatggcgagcagaggctctcgcctcgcaagtgaccca 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 5067 - 5019
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttaccca 184  Q
    ||||||||||||||| ||||| |||||||||||||| || ||| |||||    
T  5067 acctgaactcgccatggcgagcagaggctctcgcctcgcaagtgaccca 5019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 12453 - 12329
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||||||| |||||| ||||||    
T  12453 ttagatgattttgagtgtctgaacatgtataataatgattaggaaagattttagattgagattgaacctggaatag-ttaagaatggattttttggagtt 12355  T
Q  134 gcacctgaactcgccatagcgagtag 159  Q
     || ||||| | ||||||||||||||    
T  12354 acaactgaatttgccatagcgagtag 12329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 70; Significance: 1e-31; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 16857 - 17029
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagttt 112  Q
    |||||||||| | ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| |||| || ||    
T  16857 ttttgactttcgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacctggaa-agatt 16955  T
Q  113 aagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccag 185  Q
     |||||| || |||||| | |   ||||||||||||||  | ||| |||||||||||||| || ||| ||||||    
T  16956 tagaatgaaacttttggaattctgacctgaactcgccacggagagcagaggctctcgcctcgcgagtgacccag 17029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 78993 - 79092
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||| ||||||||| ||||| ||||||||| |||||||||| ||| ||||| |||||||||||||||| || |||||||||||||||||||    
T  78993 agattttgtaattctgacttttgagttgaaccttagatgcttttgagtgcatgaacatgtttaataatgattaggaaggaatgtagaatgagattgaacc 79092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 13711 - 13760
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| ||| |||||||||||| ||||| ||||||| ||||||||||||||    
T  13711 attttgtatttttgacttttgagttgaaccttagaggtttttgagtgcct 13760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 2716 - 2820
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  2716 agatttcgtgattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 2815  T
Q  102 gggaa 106  Q
     ||||    
T  2816 tggaa 2820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 5752 - 5955
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||  |||| ||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||    
T  5752 agatttcgtgttttttacttttgagttgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagattgtaggatgagattgaacc 5851  T
Q  102 -gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     ||||| | ||   ||||| |||||  |||| |   ||||||||| ||||  ||||| |||||||||||||| | |||| ||||||  ||||| ||||||    
T  5852 tgggaaga-ttattgaatgaaatttgcgggattctgacctgaacttgccacggcgagcagaggctctcgcctcgttagtgacccagaaacagagtgcctt 5950  T
Q  200 gttag 204  Q
    |||||    
T  5951 gttag 5955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 98
Target Start/End: Original strand, 13239 - 13335
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattga 98  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  13239 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattga 13335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 691 - 790
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| | ||| |||||||||||||    
T  691 agatttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatttaggatgagattgaacc 790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 815 - 883
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||||||    
T  815 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttag 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 29026 - 28927
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| || |||||||||||| |||||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  29026 agatttcgtgattttgacttttgagtagatccttagatgcttttgagttcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaacc 28927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 129
Target Start/End: Original strand, 1368 - 1461
Alignment:
Q  36 agatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||| |||||||||||||| |||||||| ||||||||||  ||| || |||| |||||||||||| |  | ||||||| |||| |||||||||    
T  1368 agatgattttgagtgcctgaacatgtatattaatgattagacaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 1461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 227942 - 227851
Alignment:
Q  42 ttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttgggagtt 133  Q
    |||||||||||| | ||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  227942 ttttgagtgcctaaacatgtataataatgattaggaaagattctagattgagattgaacctggaatagtttaagaatggatttttgggagtt 227851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 8164 - 8369
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||||||| |||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  8164 agatttcgtgattttgacttttgagttgatcctt-gatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 8262  T
Q  102 gggaatagtttaagaatg-aatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     ||||   ||  |||||| || |||||| | |    ||| |||||||||  | |||||||||||||||||| || ||| ||||||  ||||| || ||||    
T  8263 tggaaagattgtagaatgaaacttttggaattctggcctaaactcgccacggtgagtagaggctctcgcctcgcgagtgacccagaaacagagtgtcttg 8362  T
Q  201 ttaggtt 207  Q
    |||||||    
T  8363 ttaggtt 8369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 4773 - 4878
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| |||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  4773 agatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 4872  T
Q  102 gggaat 107  Q
     |||||    
T  4873 tggaat 4878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 694 - 799
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| ||||||||||||||  |||| ||||||||||||||||||| ||||| |||||||||||||    
T  694 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaatatgtctaataatgattaggaaagaatgtaggatgagattgaacc 793  T
Q  102 gggaat 107  Q
     |||||    
T  794 tggaat 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 818 - 886
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttag 204  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| || ||||||||    
T  818 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtaacccagaaacagagtgacttgttag 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 10068 - 10173
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| ||||||||||||  |||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  10068 agatttcgtatttttgacttttgaattgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 10167  T
Q  102 gggaat 107  Q
     |||||    
T  10168 tggaat 10173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 13974 - 13869
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||  ||||| |||||||||||||    
T  13974 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaaggatgtagcatgagattgaacc 13875  T
Q  102 gggaat 107  Q
     |||||    
T  13874 tggaat 13869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 4 - 97
Target Start/End: Complemental strand, 23370 - 23277
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattg 97  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||    
T  23370 atttcgtaattttgacttttgagttgatccttagatgcctttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattg 23277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 39561 - 39666
Alignment:
Q  1 cagatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||| | ||||||||||||| ||||||||||||||| |||||||| ||||| ||||| || |||||||||||||||| ||||||||||||||||||    
T  39561 cagatttcatgattttgacttttgagttgatccttagatgcttttgagtacctgaacatgtctattaatgattaggaaagaatgtagaatgagattgaac 39660  T
Q  101 cgggaa 106  Q
    | ||||    
T  39661 ctggaa 39666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Complemental strand, 40346 - 40242
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| |||||||| |||||| |||||||||||||| ||||| ||||||||||||||||||| || || |||||||||||||    
T  40346 agatttcgtgattttgacttttgagttgatccgtagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatggaggatgagattgaacc 40247  T
Q  102 gggaa 106  Q
     ||||    
T  40246 tggaa 40242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 101
Target Start/End: Original strand, 59179 - 59233
Alignment:
Q  47 agtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||    
T  59179 agtgcctgaacatgtctaataatgattaggacagaatgtagaatgagattgaacc 59233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 26660 - 26611
Alignment:
Q  57 catgtataataatgattaggaaagattgtagaatgagattgaaccgggaa 106  Q
    ||||| ||||||||||||||||||| ||||| |||||||| |||| ||||    
T  26660 catgtctaataatgattaggaaagaatgtaggatgagattaaacctggaa 26611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 248
Target Start/End: Complemental strand, 1391 - 1327
Alignment:
Q  184 agttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1391 agttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 1327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 18589 - 18693
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| | ||||||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  18589 agattttgtgattttgacttttgagatgatccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 18688  T
Q  102 gggaa 106  Q
     ||||    
T  18689 tggaa 18693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 1562 - 1673
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| |  || | |||| ||||||||  ||||||||||||| ||| || ||||||| ||||||||||||    
T  1562 cctgaactcgccatagcgagtagaggctctcgcctcgtgagatgcccaattacagaacaccttgttaggttacatgtgacctttgtcgcacgagttgatg 1661  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  1662 tgagttgatctt 1673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 101
Target Start/End: Original strand, 1384 - 1451
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| || ||||||||||| ||||||||||||||| |||| ||| || ||||  |||||||||||    
T  1384 ttagatgattctgagtgcctgaacatgtataataatgagtaggcaagtttttagatggagattgaacc 1451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 137 - 248
Target Start/End: Original strand, 103403 - 103514
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    |||||||||||||||||||||||||||||||||||  | ||||  ||| ||||||||  ||||||||||||||||| || |||||||  |||||||||||    
T  103403 cctgaactcgccatagcgagtagaggctctcgcctcacgagttgtccatttacagaacaccttgttaggttaaatgtgacctttgtcgtacgagttgatg 103502  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  103503 tgagttgatctt 103514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 129
Target Start/End: Original strand, 103244 - 103341
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| | || ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| ||||||||||||||    
T  103244 ccttagaggattctgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatgaatttttggg 103341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 5327 - 5222
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| ||||||||| |||||||||| |||  |||| ||||||||||||||||||| ||||| |||||||||||||    
T  5327 agattttgtaattttgacttttgagttgaaccttagatgcttttgagtgcatgaagatgtctaataatgattaggaaagaatgtaggatgagattgaacc 5228  T
Q  102 gggaat 107  Q
     |||||    
T  5227 tggaat 5222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 13690 - 13585
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||||||||| ||| ||||||||||||||  |||| ||||||||||||||||||| ||||| |||||| ||||||    
T  13690 agatttcgtgattttgacttttgagttgatccttatatgcttttgagtgcctgaaaatgtctaataatgattaggaaagaatgtaggatgagactgaacc 13591  T
Q  102 gggaat 107  Q
     |||||    
T  13590 tggaat 13585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 32543 - 32438
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||||| ||||||||| ||| | |||||||||||||    
T  32543 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgactaggaaagaatgtgggatgagattgaacc 32444  T
Q  102 gggaat 107  Q
     |||||    
T  32443 tggaat 32438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 21380 - 21275
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| |||||||||||||||| ||||| |||||||||||||| ||||||||| ||||| |||||||||||| |||||| ||||| ||||||||| |||    
T  21380 agattttgtaattttgacttttgagttgaaccttagatgttttttagtgcctgaacatgtctaataatgattatgaaagaatgtaggatgagattgtacc 21281  T
Q  102 gggaat 107  Q
     |||||    
T  21280 tggaat 21275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 8965 - 8724
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||||||||||||| ||||||||||||||  |||| ||||| ||||||||||||| ||||| |||||||||||||    
T  8965 agattttgtgattttgacttttgagttgatccttagatgcttttgagtgcctgaatatgtctaatagtgattaggaaagaatgtaggatgagattgaacc 8866  T
Q  102 -gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
      | || | | ||| |  ||| || ||||| |   ||||||||||||||  || ||||||||||||||||| || | | ||||||  ||||| || ||||    
T  8865 tagaaagattgtaaaatggaacttgtgggattctgacctgaactcgccacggccagtagaggctctcgcctcgcgaatgacccagaaacagagtgtcttg 8766  T
Q  201 ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    |||||||   ||||| ||||||  ||||||||| || |||||||    
T  8765 ttaggtt--ttgcgacctttgttgcacgagttgttgagagttga 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Original strand, 17639 - 17738
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | ||||||||||||| ||| | ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||||||||    
T  17639 agatttcatgattttgacttttgagttaaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacc 17738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 16758 - 16659
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||  ||||| ||||||||| |||||||||||||| ||||| ||||||||||||||||||| ||||| | |||||||||||    
T  16758 agatttcgtacttttgacttttaagttgaaccttagatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggacgagattgaacc 16659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 6459 - 6557
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| | ||||||||||||| | |||||||||||||  ||| ||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  6459 agatttcatgattttgacttttgagatgatccttagatgccttttagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaac 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 96
Target Start/End: Complemental strand, 10634 - 10540
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagatt 96  Q
    ||||||||| |||||||| |||| ||||||||||||||| |||||||||| ||| ||||| ||||||||||||||||||| ||||| ||||||||    
T  10634 agatttcgtgattttgacctttgagttgatccttagatgcttttgagtgcatgaacatgtctaataatgattaggaaagaatgtaggatgagatt 10540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 644 - 741
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaa 99  Q
    |||||| || |||||||| || | ||||||||||| ||| |||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  644 agattttgtgattttgaccttcgagttgatccttatatgcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtagaatgagattgaa 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 106
Target Start/End: Original strand, 12440 - 12544
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| | ||| |||||||||  ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  12440 agatttcgtgattttgacttttgagatgaaccttagatgcctttgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 12539  T
Q  102 gggaa 106  Q
     ||||    
T  12540 tggaa 12544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 244
Target Start/End: Complemental strand, 10400 - 10158
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||| || ||||||||||||| ||||| |||||||||  ||||||||||| | ||||| || || ||||||||||||| ||||| |||||||||||||    
T  10400 agattttgtgattttgacttttgagttgaaccttagatgcctttgagtgcctaaacatgtctattattgattaggaaagaatgtaggatgagattgaacc 10301  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | |||| |||  ||||| || |   | ||||||||||||| ||||| |||||||||||||| || ||       ||||||||||||||||    
T  10300 tggaa-agacttagaaggaaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcacttgtgttacagaatgccttg 10203  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     |||||||||||||||||||||||  |||||||| | ||||||||    
T  10202 tttaggttaaatgcgatctttgtcgtacgagttgttatgagttga 10158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 79963 - 80205
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| ||||||||||||| ||||| | ||| |||   |||||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  79963 agatttcgtgattttgacttttgagttgaacattaaatgccattgagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 80062  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   | ||||||||| ||| ||||| |||||||||||||| || ||  |     |||||||||||||||    
T  80063 tggaa-agacttagaatgaaactttggagaatctga-ctgaactcgacatggcgagcagaggctctcgcctcgcgagcaatagtattacagaatgccttg 80160  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     ||||||||||||||||||| ||| ||||||||| | ||||||||    
T  80161 tttaggttaaatgcgatcttcgtcgcacgagttgttatgagttga 80205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 22459 - 22550
Alignment:
Q  158 agaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||||| | | |||||||||||||| | |||| ||| | ||||||||||||||||| ||||||||||||||||||||||||    
T  22459 agaggctctcgccttgcgaatgacccagttacagaaagtcttgcttatgctaaatgcgatctttgtcgcacgagttgatgtgagttgatctt 22550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 1991 - 2094
Alignment:
Q  146 gccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
    ||||||||||||||||| |||||||| || |||      |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  1991 gccatagcgagtagagggtctcgcctcgcgagtacttgtgttacagaatgccttgtttaggttaaatgcgatctttgtcgcacgagttgatgtgagttga 2090  T
Q  245 tctt 248  Q
    ||||    
T  2091 tctt 2094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 205
Target Start/End: Complemental strand, 5013 - 4810
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| | ||| ||||||| ||||| ||||||||| |||||||||||| | ||||| || |||||| |||| ||||||||||||||||||||||||    
T  5013 agatttcgtgactttaacttttgagttgaaccttagatgcttttgagtgcctaaacatgtctattaatgactagggaagattgtagaatgagattgaacc 4914  T
Q  102 gggaatagtttaagaatgaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
     | ||   ||| |||||||| |||||    |   |||||  |||||||| ||||| | |||||||||||| || || |||||||  |||||||||| |||    
T  4913 tgaaaagattttagaatgaacttttgtcgatcagacctgtcctcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgt 4814  T
Q  202 tagg 205  Q
    ||||    
T  4813 tagg 4810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 11170 - 11260
Alignment:
Q  17 gacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    |||||||| ||||| ||||||||  |||||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||||| |||||    
T  11170 gacttttgagttgaaccttagattcttttgagtgcctgaacatgtctaataatgattaggaaagaatgtaggatgagattgaacctggaat 11260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 127
Target Start/End: Complemental strand, 14105 - 14004
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttt 125  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||| ||| || |  |||||| |||| |||||    
T  14105 gttgaaccttagatgattttgagtgcctgaatatgtataataatgattaggtaagtttttagattgagattggacctggtaatgtttaaaaatggatttt 14006  T
Q  126 tg 127  Q
    ||    
T  14005 tg 14004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 15107 - 15213
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||  ||||| || |||||| |||||||||||| |  |||| ||||||||||||||||||| ||||| |||||||||||||    
T  15107 agatttcgtatttttgacttttaagttgaaccgtagatgcttttgagtgccttaatatgtctaataatgattaggaaagaatgtaggatgagattgaacc 15206  T
Q  102 gggaata 108  Q
     ||||||    
T  15207 tggaata 15213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 32907 - 32966
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgt 61  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||| ||||||| |||||    
T  32907 agatttcgtatttttgacttttgagttgaaccttagatgcttttgaatgcctgaacatgt 32966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 2431 - 2326
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||||||||||| ||||| |||||||||  ||||||||||||| | ||| ||||||| |||||||| || ||||| |||||||||||||    
T  2431 agatttcgtatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataataattaggaaggaatgtaggatgagattgaacc 2332  T
Q  102 gggaat 107  Q
     |||||    
T  2331 tggaat 2326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 47465 - 47360
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| | |||||||||| ||||| ||||||||| ||||||||| ||||  |||| |||||||||||||||| || ||||| |||||||||||||    
T  47465 agatttcgtattgttgacttttgagttgaaccttagatgcttttgagtgtctgaatatgtctaataatgattaggaatgaatgtaggatgagattgaacc 47366  T
Q  102 gggaat 107  Q
     |||||    
T  47365 tggaat 47360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 64306 - 64346
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  64306 ttttgacttttgagttgaaccttagatgcttttgagtgcct 64346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 6e-21; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 80796 - 80701
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||||    
T  80796 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttggg 80701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 80618 - 80582
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttg 173  Q
    |||||||||||||||||||||||||||||||||||||    
T  80618 cctgaactcgccatagcgagtagaggctctcgccttg 80582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 128557 - 128652
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| |||| |||||||||  ||||||||||||||||||| ||| |   ||| |||||||||||| |||| ||||||  |||| |||||||||    
T  128557 ttagatgattttaagtgcctgaatatgtataataatgattaggcaagttatgagattgagattgaacctggaaaagtttataaatggatttttggg 128652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 78619 - 78569
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||| || ||||||| || |||||||||||||||||||    
T  78619 ccttgttaggttaaatgtgacctttgtcgcatgagttgatgtgagttgatc 78569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 171
Target Start/End: Original strand, 128735 - 128769
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcct 128769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 100
Target Start/End: Complemental strand, 2343 - 2245
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    |||||||| |||| | ||||||  || || ||||||||||||||||||||||||  ||| | | |||||||||||||||||||||||||||||||||||    
T  2343 agatttcggaattataactttttagtggaaccttagatgtttttgagtgcctgaagatgcacactaatgattaggaaagattgtagaatgagattgaac 2245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 1382 - 1288
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    |||||||||||| ||||| |||||||||  ||||||||||||| |||   ||||||||||||||||||| ||||| ||||||||||||| |||||    
T  1382 ttttgacttttgagttgaaccttagatgcctttgagtgcctgaacattactaataatgattaggaaagaatgtaggatgagattgaacctggaat 1288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 232
Target Start/End: Complemental strand, 517 - 288
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||| |||||||||||||  |||| |||||||||  || |||||||||| ||||| ||||| ||||||||||||| ||||| |||||||||||||    
T  517 agatttcgtgattttgacttttgaattgaaccttagatgcctt-gagtgcctgaacatgtctaatattgattaggaaagaatgtaggatgagattgaacc 419  T
Q  102 -gggaatagtttaagaat-gaatttttgggagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgcctt 199  Q
     || |||| ||  ||||| ||| ||| | || |   | ||||||||||||| ||||| |||||||||||||| || ||        ||||||||||||||    
T  418 tggaaatactt--agaatggaactttggagaatctga-ctgaactcgccatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgcctt 322  T
Q  200 g-ttaggttaaatgcgatctttgtcacacgagtt 232  Q
    | ||||||||||||||||||||||| ||||||||    
T  321 gtttaggttaaatgcgatctttgtcgcacgagtt 288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 3949 - 3855
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    |||||||||||| ||||| |||||||||  ||||||||||||| ||||  || |||||||||||||||| ||||| ||||||||||||| |||||    
T  3949 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 3855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 8013 - 7919
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaat 107  Q
    |||||||||||| ||||| |||||||||  ||||||||||||| ||||  || |||||||||||||||| ||||| ||||||||||||| |||||    
T  8013 ttttgacttttgagttgaaccttagatgactttgagtgcctgaacatgactagtaatgattaggaaagaatgtaggatgagattgaacctggaat 7919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 27305 - 27400
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| |||||||||||||| |||||||||||||||||||| ||| || |||  |||||||||||| || | | |||||||||| |||||||||    
T  27305 ttagatgattttgagtgcctgaacatgtataataatgattaggcaagtttttagtttgagattgaacctgggaaattttaagaatggatttttggg 27400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 171
Target Start/End: Original strand, 27485 - 27518
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||||| |||||||    
T  27485 ctgaactcgccatagcgagtagaggccctcgcct 27518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 7089 - 6984
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| || |||||||||||| ||||| |||||||||  ||||||||||||| | ||| ||||||| |||||||| || ||||| |||||||||||||    
T  7089 agatttcatatttttgacttttgagttgaaccttagatgcctttgagtgcctgaacgtgtctaataattattaggaaggaatgtaggatgagattgaacc 6990  T
Q  102 gggaat 107  Q
     |||||    
T  6989 tggaat 6984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 2 - 244
Target Start/End: Original strand, 9465 - 9707
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||| | |||| |||||||| ||||| |||||||||  ||||||||||||| ||||| ||||| |||||| |||||| ||||| ||||||||||| |    
T  9465 agatttcatgatttcgacttttgagttgaaccttagatgcctttgagtgcctgaacatgtctaatattgattacgaaagaatgtaggatgagattgaatc 9564  T
Q  102 gggaatagtttaagaatgaatttttgg-gagttgcacctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg 200  Q
     |||| ||  | ||||||||  ||||| || |   | ||||||||| ||| ||||| |||||||||||||| || ||        |||||||||||||||    
T  9565 tggaa-agacttagaatgaaactttggagaatctga-ctgaactcgtcatggcgagcagaggctctcgcctcgcgagcactagtattacagaatgccttg 9662  T
Q  201 -ttaggttaaatgcgatctttgtcacacgagttgatgtgagttga 244  Q
     |||||||||||| |||||||||| ||||||||| | ||||||||    
T  9663 tttaggttaaatgtgatctttgtcgcacgagttgttatgagttga 9707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 138 - 248
Target Start/End: Complemental strand, 13122 - 13011
Alignment:
Q  138 ctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||| |||||||||||||||| |||||||||||  | |||      |||||| ||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  13122 ctgaaatcgccatagcgagtaggggctctcgcctcacgagtacttgtgttacaaaatgccttgtttaggttaaatgcaatctttgtcgcacgagttgatg 13023  T
Q  237 tgagttgatctt 248  Q
    ||||||||||||    
T  13022 tgagttgatctt 13011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 13301 - 13234
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||| ||||| ||||||||||| ||||||| |||||||||||| ||| || |||| ||||||||||||    
T  13301 ttagttgtttatgagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 13234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 8290 - 8193
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    ||||||||||||||||| ||   ||||| | |||| ||||| | ||||||||| ||||||| |||||||||||| ||| || |||| ||||||||||||    
T  8290 gatttcgtaattttgaccttaa-gttgaactttagttgtttctaagtgcctgaacatgtatgataatgattaggcaagtttttagattgagattgaacc 8193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 6058 - 6018
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  6058 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 7253 - 7213
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  7253 ttttgacttttgagttgaaccttagatgcttttgagtgcct 7213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 13665 - 13570
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| || | ||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| || | |||||||||||| |||||||||    
T  13665 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaagaatggatttttggg 13570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 202
Target Start/End: Original strand, 15866 - 15929
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgtt 202  Q
    |||||||||||||||||||| |||| ||||||| || |||| ||||||||||||||||||||||    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtt 15929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 129
Target Start/End: Complemental strand, 3230 - 3133
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||||| ||||||||||||||  ||||| ||||||||||||| ||| || |||| |||||||||||  || | ||||||| |||| |||||||||    
T  3230 ccttagatgattttgagtgcctgaatatgtacaataatgattaggcaagtttttagattgagattgaacttgggaaagtttaaaaatggatttttggg 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 242
Target Start/End: Complemental strand, 13482 - 13381
Alignment:
Q  141 aactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttg-ttaggttaaatgcgatctttgtcacacgagttgatgtga 239  Q
    |||||||||||||||||| |||| |||||||    |||| || ||||||||||||||||| ||||| |   ||||||||||||| ||||||||| | |||    
T  13482 aactcgccatagcgagtataggccctcgcctcatgagttgcctagttacagaatgccttgtttaggat-tttgcgatctttgtcgcacgagttgttatga 13384  T
Q  240 gtt 242  Q
    |||    
T  13383 gtt 13381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 129
Target Start/End: Complemental strand, 25640 - 25545
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    ||||||| ||||||||||||||  ||||||||||||||||||| ||| || |||| |||||||||||  |||| ||||||| |||| |||||||||    
T  25640 ttagatgattttgagtgcctgaaaatgtataataatgattaggcaagtttttagattgagattgaacttggaaaagtttaaaaatggatttttggg 25545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 25403 - 25353
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    |||||||||| |||||| || ||||||| ||||||||| ||||||||||||    
T  25403 ccttgttaggataaatgtgacctttgtcgcacgagttgttgtgagttgatc 25353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 119
Target Start/End: Original strand, 24182 - 24268
Alignment:
Q  33 cttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatg 119  Q
    |||||||| ||||||||||||||  || |||||||||||||||| ||| || |||| |||||||||||| |||||||||||| ||||    
T  24182 cttagatgattttgagtgcctgaatatatataataatgattaggcaagcttttagattgagattgaacctggaatagtttaaaaatg 24268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 52058 - 51953
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||| |||| ||||||| ||| | |||| ||||  ||||||||||||| || || ||||||||||||||||||| ||||| | |||||||||||    
T  52058 agatttcgtattttttacttttgagttaaacctttgatgcctttgagtgcctgaacaagtctaataatgattaggaaagaatgtaggacgagattgaacc 51959  T
Q  102 gggaat 107  Q
     |||||    
T  51958 tggaat 51953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 26887 - 26835
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  26887 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 26835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 36024 - 36076
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  36024 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 36076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 36944 - 36892
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  36944 gatttcgtaattttgacttttgagttgaaccttagatgtttttgagtgcctga 36892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 69
Target Start/End: Original strand, 10903 - 10970
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataat 69  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||||||||| ||||| |||||||    
T  10903 agatttcgtatttttgacttttgagttgaaccttagatgcttttgagtgcctgaacatgtctaataat 10970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 10648 - 10569
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaaga 81  Q
    ||||||||| ||||||||||||| ||||||||||||||| |||||||||||| | ||||  || || |||||||||||||    
T  10648 agatttcgtgattttgacttttgagttgatccttagatgcttttgagtgccttaacatgcctagtagtgattaggaaaga 10569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 248
Target Start/End: Original strand, 14506 - 14573
Alignment:
Q  182 ccagttacagaatgccttgtt-aggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||||||||||| ||| ||||||||||||| ||| ||| ||||||||||||||||||||    
T  14506 ccagttacagaatgccttgtttaggataaatgcgatcttggtcgcacaagttgatgtgagttgatctt 14573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 30379 - 30428
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||    
T  30379 atttcgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 30428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 362 - 253
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatg 236  Q
    ||||||||||||||||||||||||||||||||||| |  ||       |  ||||||| ||||||||||||||||| || ||||||| ||| ||||||||    
T  362 cctgaactcgccatagcgagtagaggctctcgcctcgtgagcccttgtgagacagaataccttgttaggttaaatgtgacctttgtcgcacaagttgatg 263  T
Q  237 tgagttgatc 246  Q
    ||||||||||    
T  262 tgagttgatc 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 537 - 445
Alignment:
Q  37 gatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttggg 129  Q
    |||| |||||||||| |||  ||||||||||||||||| | ||| || |||| |||||||||||| |  | ||||||| |||| |||||||||    
T  537 gatgattttgagtgcttgaatatgtataataatgattacgcaagtttttagattgagattgaacctgagaaagtttaaaaatggatttttggg 445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 127
Target Start/End: Complemental strand, 7188 - 7095
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaatttttg 127  Q
    ||||||| ||||||||| ||||  ||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| |||||||    
T  7188 ttagatgattttgagtgactgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggatttttg 7095  T

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Target: scaffold0124 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 101
Target Start/End: Original strand, 24293 - 24381
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaacc 101  Q
    |||||||||||| ||| | |||||||||   |||||||||||| ||||| ||||| ||||||||||||| | ||| |||||||||||||    
T  24293 ttttgacttttgagtttaaccttagatgcccttgagtgcctgaacatgtctaatattgattaggaaagaatttaggatgagattgaacc 24381  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 126
Target Start/End: Complemental strand, 268186 - 268094
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaattttt 126  Q
    ||||||| || | ||||||||| |||||||||||||||||||| ||| || |||| |||||||||||| || | ||||||| |||| ||||||    
T  268186 ttagatgattctaagtgcctgaacatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaaaaatggattttt 268094  T

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Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 268007 - 267909
Alignment:
Q  137 cctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgat 235  Q
    |||||||||| |||||||||||||||||||||||| || |||      |  ||||||  ||||||||||||||||| || ||||||| |||||||||||    
T  268007 cctgaactcggcatagcgagtagaggctctcgcctcgcgagtccttgtgagacagaacaccttgttaggttaaatgtgacctttgtcgcacgagttgat 267909  T

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Target: scaffold0139 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 38672 - 38565
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtg 238  Q
    ||||||||||||||||||||||||||||||||| || ||       |  ||||||| ||||||| ||||||||| || |||| || ||||||||||||||    
T  38672 tgaactcgccatagcgagtagaggctctcgcctcgcgagcccttgtgagacagaataccttgttgggttaaatgagacctttatcgcacgagttgatgtg 38573  T
Q  239 agttgatc 246  Q
    ||||||||    
T  38572 agttgatc 38565  T

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Target: scaffold0139; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 20470 - 20418
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctg 54  Q
    |||||| ||| |||||||||||| ||||| |||||||||||||||||||||||    
T  20470 agattttgtagttttgacttttgagttgaaccttagatgtttttgagtgcctg 20418  T

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Target: scaffold0139; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 38833 - 38751
Alignment:
Q  32 ccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaa 114  Q
    ||||||||| || ||||||| |||  ||||||||||||||||||| ||| || |||| |||||||||||| || | |||||||    
T  38833 ccttagatgattctgagtgcgtgaatatgtataataatgattaggcaagtttttagattgagattgaacctgggaaagtttaa 38751  T

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Target: scaffold1403 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 246
Target Start/End: Complemental strand, 846 - 796
Alignment:
Q  196 ccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||||||||||||||| || ||||||| ||||||||||||||||||||||    
T  846 ccttgttaggttaaatgagacctttgtcgcacgagttgatgtgagttgatc 796  T

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Target: scaffold1403; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 126
Target Start/End: Complemental strand, 1076 - 992
Alignment:
Q  41 tttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaaccgggaatagtttaagaatgaattttt 126  Q
    |||||||||||||||   |||||||||||||||||| ||  || |||| |||||||||||| || | ||||||| |||| ||||||    
T  1076 tttttgagtgcctgaatgtgtataataatgattaggcaa-tttttagattgagattgaacctgggaaagtttaaaaatggattttt 992  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 34 - 100
Target Start/End: Complemental strand, 332850 - 332784
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| ||||||||||||||  |||||||| |||||||||||||| || |||| |||||||||||    
T  332850 ttagatgattttgagtgcctgaatatgtataagaatgattaggaaagtttttagattgagattgaac 332784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 74
Target Start/End: Complemental strand, 70272 - 70211
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgatta 74  Q
    |||||||||||| ||||| ||||||||||||||||||||||||  ||||||| ||| |||||    
T  70272 ttttgacttttgagttgaaccttagatgtttttgagtgcctgaagatgtatattaaagatta 70211  T

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Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 6100 - 6156
Alignment:
Q  190 agaatgccttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    ||||| ||||||||||||||||| || ||||||| |||||||||||||||| |||||    
T  6100 agaataccttgttaggttaaatgtgacctttgtcgcacgagttgatgtgagatgatc 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2044 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold2044
Description:

Target: scaffold2044; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 1087 - 1134
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    ||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  1087 agatttcgtgattttgacttttgagttgatccttagatgcttttgagt 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 29227 - 29156
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattg 97  Q
    ||||| ||||||||| ||||||||||||||  || |||||||||||||||| ||| || |||| ||||||||    
T  29227 gttgaaccttagatgattttgagtgcctgaatatatataataatgattaggcaagtttttagattgagattg 29156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 24566 - 24534
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  24566 tgaactcgccatagcgagtagaggcgctcgcct 24534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 35436 - 35404
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  35436 tgaactcgccatagcgagtagaggcgctcgcct 35404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 891 - 933
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  891 ttttgacttttgagttgaaccttagatgtttttgagtgcctga 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 21449 - 21491
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  21449 ttttgacttttgagttgaaccttagatgtttttgagtgcctga 21491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 55
Target Start/End: Original strand, 29341 - 29383
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  29341 ttttgacttttgagttgaaccttagatgtttttgagtgcctga 29383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 35525 - 35594
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagat 95  Q
    ||||| ||||| ||| ||||||||||||||  ||||||||||||||||||| ||| || |||| ||||||    
T  35525 gttgaaccttaaatgattttgagtgcctgaatatgtataataatgattaggcaagtttttagattgagat 35594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 45579 - 45534
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  45579 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 45534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 44535 - 44486
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  44535 attttgtaattttgacttttgagttgaaccttagatgcttttgagtgcct 44486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 14967 - 14914
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||| |||||||||||||| | ||||||||||||||| ||| ||||||||||    
T  14967 agattttgtaattttgactttagagttgatccttagatgctttggagtgcctga 14914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 11598 - 11534
Alignment:
Q  185 gttacagaatgcc-ttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatctt 248  Q
    ||||||||||||| || ||||||| |||||||||||||||   |||||||||||||||| |||||    
T  11598 gttacagaatgccctttttaggttgaatgcgatctttgtcgttcgagttgatgtgagttaatctt 11534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 18721 - 18676
Alignment:
Q  8 cgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||    
T  18721 cgtatttttgacttttgagttgaaccttagatgtttttgagtgcct 18676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 1970 - 1926
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||    
T  1970 gtaattttgacttttgagttgaaccttagatgcttttgagtgcct 1926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 15877 - 15837
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  15877 ttttgacttttgagttgaaccttagatgtttttgagtgcct 15837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 6721 - 6761
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  6721 ttttgacttttgagttgaaccttagatgtttttgagtgcct 6761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 97359 - 97327
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||||||||||||    
T  97359 tgaactcgccatagcgagtagaggctctcgcct 97327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 106637 - 106605
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    |||||||||||||||||||||||||||||||||    
T  106637 tgaactcgccatagcgagtagaggctctcgcct 106605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 97302 - 97253
Alignment:
Q  197 cttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    |||| |||| |||||| || ||||||| ||||||||||||||||||||||    
T  97302 cttgctaggataaatgtgacctttgtcgcacgagttgatgtgagttgatc 97253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 197 - 246
Target Start/End: Complemental strand, 106580 - 106531
Alignment:
Q  197 cttgttaggttaaatgcgatctttgtcacacgagttgatgtgagttgatc 246  Q
    |||| |||| |||||| || ||||||| ||||||||||||||||||||||    
T  106580 cttgctaggataaatgtgacctttgtcgcacgagttgatgtgagttgatc 106531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 1372 - 1329
Alignment:
Q  10 taattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||||    
T  1372 taattttgacttttgagttgaaccttagatgcttttgagtgcct 1329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 17355 - 17402
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||||| |||||||||||||||| ||||| ||||||||| ||||||||    
T  17355 agattttgtaattttgacttttgagttgaaccttagatgcttttgagt 17402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 590 - 661
Alignment:
Q  26 gttgatccttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattg 97  Q
    ||||||||||| ||| |||||||||| |||  ||||||||||||||||||| ||| || ||||  |||||||    
T  590 gttgatccttaaatgattttgagtgcatgaatatgtataataatgattaggcaagtttttagatggagattg 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 18093 - 18136
Alignment:
Q  10 taattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||    
T  18093 taattttgactttagagttgaaccttagatgtttttgagtgcct 18136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 35155 - 35226
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    |||| |||||||||||||||| ||||| ||||||||| |||||||| |||    ||||||||||| ||||||    
T  35155 attttgtaattttgacttttgagttgaaccttagatgcttttgagtacctttagatgtataataaagattag 35226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 100
Target Start/End: Original strand, 2935 - 3001
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattgaac 100  Q
    ||||||| |||||||||||| |  || |||||||||||||||| ||| || |||| |||||||||||    
T  2935 ttagatggttttgagtgccttaatatatataataatgattaggcaagtttttagattgagattgaac 3001  T

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Target: scaffold0327 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 75
Target Start/End: Complemental strand, 742 - 680
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    |||||||||||| ||||| ||||||||| |||||||||||| |  |||| |||||| ||||||    
T  742 ttttgacttttgagttgaaccttagatgcttttgagtgccttaagatgtttaataaagattag 680  T

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Target: scaffold0297 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 10464 - 10502
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgc 51  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  10464 ttttgacttttgagttgaaccttagatgtttttgagtgc 10502  T

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Target: scaffold0215 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 27299 - 27257
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||    
T  27299 tttttacttttgagttgaaccttagatgtttttgagtgcctga 27257  T

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Target: scaffold0077 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 76
Target Start/End: Original strand, 55271 - 55313
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattagg 76  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||    
T  55271 ttagatgattttgagtgcctgaacatgtataagaatgattagg 55313  T

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Target: scaffold1220 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 2262 - 2217
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  2262 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 2217  T

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Target: scaffold0671 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 6588 - 6543
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||| ||| |||||||||||| ||||| ||||||||||||||||||    
T  6588 attttgtatttttgacttttgagttgaaccttagatgtttttgagt 6543  T

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Target: scaffold0615 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 1718 - 1767
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| ||||||||||| |||| ||||| ||||||||| ||||||||||||    
T  1718 attttgtaattttgacctttgagttgaaccttagatgcttttgagtgcct 1767  T

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Target: scaffold0483 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 792 - 747
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||||||||||| |||||||| ||||| ||||||||| ||||||||    
T  792 atttcgtaatttggacttttgagttgaaccttagatgcttttgagt 747  T

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Target: scaffold0439 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 2080 - 2125
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||    
T  2080 attttgtaattttgacttttgcgttgaaccttagatgcttttgagt 2125  T

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Target: scaffold0439; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 9940 - 9985
Alignment:
Q  4 atttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||| |||||||||||||||| ||||| ||||||||| ||||||||    
T  9940 attttgtaattttgacttttgcgttgaaccttagatgcttttgagt 9985  T

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Target: scaffold0280 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 18944 - 18985
Alignment:
Q  12 attttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    ||||||||||||| ||||| ||||||||| ||||||||||||    
T  18944 attttgacttttgagttgaaccttagatgcttttgagtgcct 18985  T

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Target: scaffold0141 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Complemental strand, 39832 - 39767
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| ||||||||    
T  39832 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 39767  T

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Target: scaffold0106 (Bit Score: 30; Significance: 0.00000008; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 1765 - 1692
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    |||||||||| |||||||||||   |||| | ||||||| ||||| |||||||| ||||| ||||| |||||||    
T  1765 agatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 1692  T

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Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 7742 - 7669
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctgagcatgtataataatgattag 75  Q
    |||||||||| |||||||||||   |||| | ||||||| ||||| |||||||| ||||| ||||| |||||||    
T  7742 agatttcgtatttttgacttttaaattgaacgttagatgcttttgcgtgcctgaacatgtctaatattgattag 7669  T

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Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 16137 - 16084
Alignment:
Q  2 agatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||| ||||||||||||  |||| || |||||| ||||||||||||||    
T  16137 agatttcgtatttttgacttttgaattgaaccatagatgcttttgagtgcctga 16084  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 74980 - 75045
Alignment:
Q  136 acctgaactcgccatagcgagtagaggctctcgccttgctagttacccagttacagaatgccttgt 201  Q
    ||||||||||||||  ||||| |||||||||||||| || ||| ||||||  ||||| ||||||||    
T  74980 acctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgt 75045  T

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Target: scaffold1296 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 870 - 830
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    |||||||||||||||| ||||| ||||||||| ||||||||    
T  870 gtaattttgacttttgagttgaaccttagatgcttttgagt 830  T

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Target: scaffold1048 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 1897 - 1853
Alignment:
Q  5 tttcgtaattttgacttttgtgttgatccttagatgtttttgagt 49  Q
    ||||||| ||| |||||||| ||||| ||||||||||||||||||    
T  1897 tttcgtattttggacttttgagttgaaccttagatgtttttgagt 1853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 4907 - 4863
Alignment:
Q  9 gtaattttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||||||| ||||| ||||| ||| ||||||||||||    
T  4907 gtaattttgacttttgagttgaaccttaaatgcttttgagtgcct 4863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 6059 - 6099
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  6059 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6099  T

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Target: scaffold0301 (Bit Score: 29; Significance: 0.0000003; HSPs: 3)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 11937 - 11969
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  11937 tgaactcgccatagcgagtagaggcgctcgcct 11969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 15089 - 15121
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  15089 tgaactcgccatagcgagtagaggcgctcgcct 15121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Original strand, 16337 - 16369
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  16337 tgaactcgccatagcgagtagaggcgctcgcct 16369  T

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Target: scaffold0293 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 98
Target Start/End: Complemental strand, 18017 - 17953
Alignment:
Q  34 ttagatgtttttgagtgcctgagcatgtataataatgattaggaaagattgtagaatgagattga 98  Q
    ||||||| |||||||||||||  ||||||||| |||||||||| ||| || |||| ||| |||||    
T  18017 ttagatggttttgagtgcctggacatgtataagaatgattaggcaagtttttagattgaaattga 17953  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 9070 - 9122
Alignment:
Q  3 gatttcgtaattttgacttttgtgttgatccttagatgtttttgagtgcctga 55  Q
    |||||||||  |||||| |||  ||||| ||||||||||||||||||||||||    
T  9070 gatttcgtagatttgacctttaagttgaaccttagatgtttttgagtgcctga 9122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 3315 - 3275
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  3315 ttttgacttttgagttgaaccttagatgcttttgagtgcct 3275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 6981 - 6941
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  6981 ttttgacttttgagttgaaccttagatgcttttgagtgcct 6941  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 15992 - 16032
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| ||||||| ||||| ||||||||||||||||||||||    
T  15992 tttttacttttgagttgaaccttagatgtttttgagtgcct 16032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 15147 - 15107
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||| ||||||| ||||| ||||||||||||||||||||||    
T  15147 tttttacttttgagttgaaccttagatgtttttgagtgcct 15107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 46370 - 46410
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  46370 ttttgacttttgagttgaaccttagatgcttttgagtgcct 46410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 13234 - 13194
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||||| ||||||||| ||||||||||||    
T  13234 ttttgacttttgagttgaaccttagatgcttttgagtgcct 13194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 190924 - 190964
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  190924 ttttgacttttgagttcaaccttagatgtttttgagtgcct 190964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 192627 - 192667
Alignment:
Q  13 ttttgacttttgtgttgatccttagatgtttttgagtgcct 53  Q
    |||||||||||| ||| | ||||||||||||||||||||||    
T  192627 ttttgacttttgagttcaaccttagatgtttttgagtgcct 192667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 209277 - 209245
Alignment:
Q  139 tgaactcgccatagcgagtagaggctctcgcct 171  Q
    ||||||||||||||||||||||||| |||||||    
T  209277 tgaactcgccatagcgagtagaggcgctcgcct 209245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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