View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11072_low_11 (Length: 270)
Name: NF11072_low_11
Description: NF11072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11072_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 254
Target Start/End: Complemental strand, 37493050 - 37492812
Alignment:
| Q |
18 |
atgtataacacacactacaacatacatatagattgaattcttttctttccttctcagtttaatttggttaatttgattgtacgaaagagaaggggtagtt |
117 |
Q |
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| T |
37493050 |
atgtataacacacactacaacatatatatagattgaattcttttctttccttctcagtttaatttggttaatttgattgtacgaaagagaaggggtagtt |
37492951 |
T |
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| Q |
118 |
ggttttgttcttgtttccaccttcttaaccctttattgtgtatagtgttcttccaaagatttagaataatatgaatgaaatgaagttactcaatttgtag |
217 |
Q |
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||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
37492950 |
ggttttgttcttgcttccaccttcttaaccctttattgtgtatagtgttcttccaaagatttagaataatgtgaatgaaatgaagttactcaatttgtag |
37492851 |
T |
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| Q |
218 |
ctttggattacgaaaaactatacac--aattatactcct |
254 |
Q |
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|||||||||||||||||||| |||| |||||||||||| |
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| T |
37492850 |
ctttggattacgaaaaactagacacaaaattatactcct |
37492812 |
T |
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