View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11073_high_25 (Length: 252)
Name: NF11073_high_25
Description: NF11073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11073_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 17 - 222
Target Start/End: Original strand, 46033250 - 46033455
Alignment:
| Q |
17 |
aaggaaaattcctacacatttcgcaaactacttaaaagtcaaaactaaccattttacatttaaatacaaatctctctaggaatacaacacaatcacgtct |
116 |
Q |
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| T |
46033250 |
aaggaaaattcctacacacttcgcaaactacttaaaagtcaaaactaaccattttacatttaaatacaaatctcactaggaatacaacacaatcacgtct |
46033349 |
T |
|
| Q |
117 |
ttttggatactagttagtaactgtacatactagtcctaactaattatagaatagaatatactataagtagattaccaactaatcattcgtcacaccacaa |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
46033350 |
ttttggatactagttagtaactgtacatactagtcctaactaattatagaatagaatatactataagtagattaccaactaatcattcgtgacaccacaa |
46033449 |
T |
|
| Q |
217 |
caaagt |
222 |
Q |
| |
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|||||| |
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| T |
46033450 |
caaagt |
46033455 |
T |
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