View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11074_high_5 (Length: 341)
Name: NF11074_high_5
Description: NF11074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11074_high_5 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 211; Significance: 1e-115; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 5454841 - 5454577
Alignment:
| Q |
16 |
agtaagtatgtacctgggctatttctaagaacaaatgatcatgaatcaacttccagatggaagttgtgttctctatagatgcatttctcttctttttagt |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5454841 |
agtaagtatgtacctgggctatttctaagaacaaatgatcataaatcaacttccagatggaagttgtgttctctatagatgcatttctcttctttttagt |
5454742 |
T |
 |
| Q |
116 |
aagcttctataccttctttttag-------taagcttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagtt |
208 |
Q |
| |
|
|||||||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5454741 |
aagcttctataccttcttgtttgactgacattaacttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagtt |
5454642 |
T |
 |
| Q |
209 |
attgcattcattataggactaatagttcttgttttggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5454641 |
attgcattcactataggactaatagttcttgtattggtcacatcagcatataaaaagaagattgg |
5454577 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 47 - 273
Target Start/End: Complemental strand, 5446227 - 5445995
Alignment:
| Q |
47 |
caaatgatcatgaatcaacttccagatggaagttgtgttctctatagatgcatttctcttctttttagtaagcttctataccttcttttt-------agt |
139 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| ||||||||| ||||||| ||| |||||| ||||||||||||||||||| ||| || | | |
|
|
| T |
5446227 |
caaatgatcatgaatcaactcccaaatggaagctgtgttctccatagatgtttttttcttctctttagtaagcttctataccagcttgttgactgacatt |
5446128 |
T |
 |
| Q |
140 |
aagcttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttg |
239 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
5446127 |
aa-cttcaaccctcagatcataaaaagaataagcagaaattgaagcttgctgggactcttgcaggagttgttgcattcattataggactaaacgttcttg |
5446029 |
T |
 |
| Q |
240 |
ttttggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
| ||||||||||||| |||| ||||||| |||| |
|
|
| T |
5446028 |
tattggtcacatcagtgtatagaaagaagcttgg |
5445995 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 143 - 273
Target Start/End: Original strand, 5828444 - 5828574
Alignment:
| Q |
143 |
cttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgttt |
242 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| || | |
|
|
| T |
5828444 |
cttcaaccctcagatcataaaaagaataacgagaagttgaagcttgttgggactcttgcaggagttattgcattcattattggactaatcgttctggtat |
5828543 |
T |
 |
| Q |
243 |
tggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
||| |||||||||||||| ||||||| |||| |
|
|
| T |
5828544 |
tggccacatcagcatatagaaagaagcttgg |
5828574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 61 - 273
Target Start/End: Complemental strand, 5502815 - 5502597
Alignment:
| Q |
61 |
tcaacttccagatggaagttgtgttctctatagatgcatttctcttctttttagtaagcttctataccttcttttt-------agtaagcttcaaccctc |
153 |
Q |
| |
|
|||||||||| ||||||||| |||||||||| |||| ||| |||||| ||||||| || |||||||||||| || | ||| |||||||||| |
|
|
| T |
5502815 |
tcaacttccaaatggaagttttgttctctatcgatgtttttttcttctctttagtatactcctataccttcttgttgactgacattaat-ttcaaccctc |
5502717 |
T |
 |
| Q |
154 |
agatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgttttggtcacatca |
253 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| || ||| |||||||| |
|
|
| T |
5502716 |
agatcataaaaagaataagcggaaattgaagcttgctgggactcttgcaggagttgttgcattcattataggactaaccgttctcgtattgatcacatca |
5502617 |
T |
 |
| Q |
254 |
gcatataaaaagaagattgg |
273 |
Q |
| |
|
| ||||| ||||||| |||| |
|
|
| T |
5502616 |
gtatatagaaagaagcttgg |
5502597 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 273
Target Start/End: Complemental strand, 5489902 - 5489772
Alignment:
| Q |
143 |
cttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgttt |
242 |
Q |
| |
|
||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
5489902 |
cttcaaccctcagatcataaagagaataagcggaaattgaagcttgctgggactcttgcaggagttattgcattcattatagtactaagcgttctcgttt |
5489803 |
T |
 |
| Q |
243 |
tggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
|| |||||||| |||||| ||||||| |||| |
|
|
| T |
5489802 |
tgatcacatcaacatatagaaagaagcttgg |
5489772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 5854433 - 5854562
Alignment:
| Q |
144 |
ttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgtttt |
243 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||| ||||||| |||||||||| |||||||||||||| |||| |||||||||||||| |||||||| || |
|
|
| T |
5854433 |
ttcaatcctcagatcataaaaagaataagaggaacttgaagcatgctgggactgttgcaggagttattacatttattataggactaatcgttcttgtatt |
5854532 |
T |
 |
| Q |
244 |
ggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
||||||||||||||||||||||||| |||| |
|
|
| T |
5854533 |
ggtcacatcagcatataaaaagaagcttgg |
5854562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 144 - 273
Target Start/End: Original strand, 5849238 - 5849367
Alignment:
| Q |
144 |
ttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgtttt |
243 |
Q |
| |
|
|||||||||||||||||||||||||||||| || ||||||| |||| ||||| |||||||||| ||||| ||||| |||||||||| |||||||| || |
|
|
| T |
5849238 |
ttcaaccctcagatcataaaaagaataagcgaaacttgaagcgtgcttggactgttgcaggagtcattgcgttcataataggactaaccgttcttgtatt |
5849337 |
T |
 |
| Q |
244 |
ggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
||| ||||||||||||| | |||| ||||| |
|
|
| T |
5849338 |
ggttacatcagcatatagagagaaaattgg |
5849367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 144 - 273
Target Start/End: Complemental strand, 20343359 - 20343230
Alignment:
| Q |
144 |
ttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgtttt |
243 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| ||||||||| |||||| | |||| || ||||||||||| |||||||||||| ||||| || || |
|
|
| T |
20343359 |
ttcaaccctcagatcataaaaagaataagaggaacttgaagctttctgggatttttgccggggttattgcatttattataggactagccgttctcgtatt |
20343260 |
T |
 |
| Q |
244 |
ggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
|||||| |||||||||| ||||||| |||| |
|
|
| T |
20343259 |
ggtcacgtcagcatatagaaagaagcttgg |
20343230 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 143 - 273
Target Start/End: Original strand, 5802842 - 5802972
Alignment:
| Q |
143 |
cttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgttt |
242 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| ||||||| || |||||||||||||||||| |||||| |||| | ||| |||||||||| |
|
|
| T |
5802842 |
cttcaaccttcagatcataaaaagaataagaggaatttgaagcgtgtcgggactcttgcaggagtttcggcattcgttatgctattaaccgttcttgttt |
5802941 |
T |
 |
| Q |
243 |
tggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
||||||||||||||| || ||||||| |||| |
|
|
| T |
5802942 |
tggtcacatcagcatctagaaagaagcttgg |
5802972 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 143 - 260
Target Start/End: Complemental strand, 5484488 - 5484371
Alignment:
| Q |
143 |
cttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgttt |
242 |
Q |
| |
|
|||||||| ||||||||| |||||||| | || ||||||| || | ||||| |||||||||||||||||||||| ||||||||| |||||||| |
|
|
| T |
5484488 |
cttcaacctacagatcatataaagaatacgagaaacttgaagcgtgttcggactgttgcaggagttattgcattcataataggactatccgttcttgtaa |
5484389 |
T |
 |
| Q |
243 |
tggtcacatcagcatata |
260 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
5484388 |
tggtcatatcagcatata |
5484371 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 143 - 273
Target Start/End: Complemental strand, 5525533 - 5525415
Alignment:
| Q |
143 |
cttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttgttt |
242 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||| | |||||||||||||||| | |||||| |||||||||||||| |||||| | | |
|
|
| T |
5525533 |
cttcaaccatcagatcataaaaagaataagaggaactcgaagcttgctgggactgtcgcagga------------attataggactaattgttcttatat |
5525446 |
T |
 |
| Q |
243 |
tggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
|||||||||||| ||||| ||||||| |||| |
|
|
| T |
5525445 |
tggtcacatcagtatatagaaagaagcttgg |
5525415 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 5489989 - 5489928
Alignment:
| Q |
47 |
caaatgatcatgaatcaacttccagatggaagttgtgttctctatagatgcatttctcttct |
108 |
Q |
| |
|
||||||||||||||| |||| ||| |||||||||||| |||||| |||||| ||| |||||| |
|
|
| T |
5489989 |
caaatgatcatgaataaactcccaaatggaagttgtgctctctaaagatgcttttttcttct |
5489928 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 116; Significance: 6e-59; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 47 - 273
Target Start/End: Original strand, 25809585 - 25809817
Alignment:
| Q |
47 |
caaatgatcatgaatcaacttccagatggaagttgtgttctctatagatgcatttctcttctttttagtaagcttctataccttcttttt-------agt |
139 |
Q |
| |
|
|||||||||||||||||||| ||| ||||||| ||||||||| ||||||| ||| |||||| ||||||||||||||||||| ||| || | | |
|
|
| T |
25809585 |
caaatgatcatgaatcaactcccaaatggaagctgtgttctccatagatgtttttttcttctctttagtaagcttctataccagcttgttgactgacatt |
25809684 |
T |
 |
| Q |
140 |
aagcttcaaccctcagatcataaaaagaataagcagaagttgaagcttgctgggactcttgcaggagttattgcattcattataggactaatagttcttg |
239 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
25809685 |
aa-cttcaaccctcagatcataaaaagaataagcagaaattgaagcttgctgggactcttgcaggagttgttgcattcattataggactaaacgttcttg |
25809783 |
T |
 |
| Q |
240 |
ttttggtcacatcagcatataaaaagaagattgg |
273 |
Q |
| |
|
| ||||||||||||| |||| ||||||| |||| |
|
|
| T |
25809784 |
tattggtcacatcagtgtatagaaagaagcttgg |
25809817 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 26452351 - 26452290
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26452351 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
26452290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 26446503 - 26446564
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
26446503 |
ttaatgcatacgcatgtcccttaacttattttttcttctcacttcagtctcttaacttttaa |
26446564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 13800042 - 13800094
Alignment:
| Q |
288 |
aggtcccttaacttattttttcttctcacttcagtcccttaacttttaattgt |
340 |
Q |
| |
|
||||||||||||||||||| | |||||| || ||||||||||| |||||||| |
|
|
| T |
13800042 |
aggtcccttaacttattttattttctcagtttggtcccttaactattaattgt |
13800094 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 24750154 - 24750088
Alignment:
| Q |
270 |
ttgggttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24750154 |
ttggcttaatgcatacgcaagtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
24750088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 275 - 340
Target Start/End: Original strand, 24744392 - 24744457
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaattgt |
340 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24744392 |
ttaatgcatacggaggtcccttaacttattttttcttctcacttcagttccttaacttttaattgt |
24744457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 43583632 - 43583571
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43583632 |
ttaatacatacgcatgtcccttaatttattttttcttctcacttcagtcccttaacttttaa |
43583571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 43579678 - 43579739
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
43579678 |
ttaatacatacgcaagtctcttaacttattttttcttctcacttcagtcccttaactattaa |
43579739 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 336
Target Start/End: Original strand, 21006138 - 21006199
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
21006138 |
ttaatacatacgcaggtcccttaacttattttttcttctcactttagtcccttaacttttaa |
21006199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 21011926 - 21011865
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
21011926 |
ttaatacatacgcaggtcccttaacttattttttcttctcacttcagtcccttaactattaa |
21011865 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 24502103 - 24502042
Alignment:
| Q |
275 |
ttaatgcatacgcaggtcccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
||||||||| | |||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
24502103 |
ttaatgcatccccaggtcccttaatttattttttcttctcacttcattcccttaacttttaa |
24502042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 48332730 - 48332774
Alignment:
| Q |
292 |
cccttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
48332730 |
cccttaacttattttttcttctcacttcagtcccttaactattaa |
48332774 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 336
Target Start/End: Complemental strand, 32960314 - 32960272
Alignment:
| Q |
294 |
cttaacttattttttcttctcacttcagtcccttaacttttaa |
336 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||| |
|
|
| T |
32960314 |
cttaacttattttttcttctcacttcagttccttaactattaa |
32960272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 7338156 - 7338195
Alignment:
| Q |
291 |
tcccttaacttattttttcttctcacttcagtcccttaac |
330 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
7338156 |
tcccttaacttattttttcttctcacttcaatcccttaac |
7338195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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