View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11074_low_7 (Length: 247)
Name: NF11074_low_7
Description: NF11074
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11074_low_7 |
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Alignment Details
Target: chr3 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 53175149 - 53175387
Alignment:
| Q |
1 |
actttgatgttcaagtcaacttttaaagaaatggatgagaggatttcataataaattgtgtgtatctttctacttctgttaatattaacctgtttataaa |
100 |
Q |
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| T |
53175149 |
actttgatgttcaagtcaacttttaaagaaatggatgagaggatttcataataaattgtgtgtatctttctacttctgttaatattaccctgtttataaa |
53175248 |
T |
|
| Q |
101 |
tacagttttaggagaattggtcagaaagttgtagagtttgttgagggaatcctggcatgatttttagatcatatccttatgatgcaacaaaaatgcactg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53175249 |
tacagttttaggagaattggtcagaaagttgtagagtttgttgagggaatcctgacatgatttttagatcatatccttatgatgcaacaaaaatgcactg |
53175348 |
T |
|
| Q |
201 |
agttgatttgtttaagtgctttgtaacatatgcctctgt |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
53175349 |
agttgatttgtttaagtgctttgtaacatatgcctctgt |
53175387 |
T |
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