View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11079_low_5 (Length: 201)
Name: NF11079_low_5
Description: NF11079
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11079_low_5 |
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Alignment Details
Target: chr3 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 28722471 - 28722629
Alignment:
| Q |
33 |
gaaagccaaaacgtattttactgtagccaatctttattccattcaaaacctatcctggaaaagccaaaacgtagttcacctcctgcaagactgcaaccgc |
132 |
Q |
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| T |
28722471 |
gaaagccaaaacgtattttactgtagccaatctttattccattcaaaacctatcctggaaaagccaaaacgtagttcacctcctgcaagactgcaaccgt |
28722570 |
T |
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| Q |
133 |
ggcaccgcccccatcctctgtgattgtccccttcatttatcctccccttctctgtgctc |
191 |
Q |
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| T |
28722571 |
ggcaccgcccccatcctctgtgattgtccccttcatttatcctccccttctctgtgctc |
28722629 |
T |
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